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Conserved domains on  [gi|145330705|ref|NP_001078028|]
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flocculation FLO11-like protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 139-396 1.04e-08

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.41  E-value: 1.04e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  139 SGGPGSRPATPTGRSSTLTANSKSSRP--STPTSRATVSSAT--RPSLTNSRSTVSATT----------KPTPMSRSTSL 204
Cdd:PHA03247 2638 PDPHPPPTVPPPERPRDDPAPGRVSRPrrARRLGRAAQASSPpqRPRRRAARPTVGSLTsladppppppTPEPAPHALVS 2717

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  205 SSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISR------SSTPTR 278
Cdd:PHA03247 2718 ATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRpavaslSESRES 2797

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  279 RPIASASAATTTANPTISQIKPSSPAPAKPMPTPSKnpalSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSA 358
Cdd:PHA03247 2798 LPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTS----AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA 2873

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 145330705  359 TRGRPGAPSSRSGSVEPGGPPGGRPRRQSCSPSRGRAP 396
Cdd:PHA03247 2874 KPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQP 2911
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 139-396 1.04e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.41  E-value: 1.04e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  139 SGGPGSRPATPTGRSSTLTANSKSSRP--STPTSRATVSSAT--RPSLTNSRSTVSATT----------KPTPMSRSTSL 204
Cdd:PHA03247 2638 PDPHPPPTVPPPERPRDDPAPGRVSRPrrARRLGRAAQASSPpqRPRRRAARPTVGSLTsladppppppTPEPAPHALVS 2717

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  205 SSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISR------SSTPTR 278
Cdd:PHA03247 2718 ATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRpavaslSESRES 2797

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  279 RPIASASAATTTANPTISQIKPSSPAPAKPMPTPSKnpalSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSA 358
Cdd:PHA03247 2798 LPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTS----AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA 2873

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 145330705  359 TRGRPGAPSSRSGSVEPGGPPGGRPRRQSCSPSRGRAP 396
Cdd:PHA03247 2874 KPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQP 2911
KAR9 pfam08580
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ...
 146-330 5.41e-07

Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.


Pssm-ID: 430088 [Multi-domain]  Cd Length: 684  Bit Score: 52.52  E-value: 5.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  146 PATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSAG 225
Cdd:pfam08580 468 INSKLRRESKLPQIASTLKQTKRPSKIPRASPNHSGFLSTPSNTATSETPTPALRPPSRPQPPPPGNRPRWNASTNTNDL 547

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  226 SV--TRSTPSTTTKSAGPSRSTTPLSrstarsstpTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIKPSSP 303
Cdd:pfam08580 548 DVghNFKPLTLTTPSPTPSRSSRSSS---------TLPPVSPLSRDKSRSPAPTCRSVSRASRRRASRKPTRIGSPNSRT 618

                         170       180
                  ....*....|....*....|....*..
gi 145330705  304 APAKPMPTPskNPALSRAASPTVRSRP 330
Cdd:pfam08580 619 SLLDEPPYP--KLTLSKGLPRTPRNRQ 643
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
96-268 4.23e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 43.20  E-value: 4.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  96 ATLTSRLANSSTESAARNHLTSRQQTSSPGLSSSSGASRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVS 175
Cdd:COG3469   43 VSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSV 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705 176 SATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARS 255
Cdd:COG3469  123 TSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTA 202

                        170
                 ....*....|...
gi 145330705 256 STPTSRPTLPPSK 268
Cdd:COG3469  203 TTTGPPTPGLPKH 215
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 139-396 1.04e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 58.41  E-value: 1.04e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  139 SGGPGSRPATPTGRSSTLTANSKSSRP--STPTSRATVSSAT--RPSLTNSRSTVSATT----------KPTPMSRSTSL 204
Cdd:PHA03247 2638 PDPHPPPTVPPPERPRDDPAPGRVSRPrrARRLGRAAQASSPpqRPRRRAARPTVGSLTsladppppppTPEPAPHALVS 2717

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  205 SSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISR------SSTPTR 278
Cdd:PHA03247 2718 ATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRpavaslSESRES 2797

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  279 RPIASASAATTTANPTISQIKPSSPAPAKPMPTPSKnpalSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSA 358
Cdd:PHA03247 2798 LPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTS----AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA 2873

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 145330705  359 TRGRPGAPSSRSGSVEPGGPPGGRPRRQSCSPSRGRAP 396
Cdd:PHA03247 2874 KPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQP 2911
PHA03247 PHA03247
large tegument protein UL36; Provisional
 140-462 6.52e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 56.10  E-value: 6.52e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  140 GGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATR-------PSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPT 212
Cdd:PHA03247 2658 PGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSladppppPPTPEPAPHALVSATPLPPGPAAARQASPALPA 2737

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  213 ASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRST---------ARSSTPTSRPTLP--PSKTISRSSTPTRRPI 281
Cdd:PHA03247 2738 APAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAgpprrltrpAVASLSESRESLPspWDPADPPAAVLAPAAA 2817

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  282 ASASAATTTANPTISQIKPSSPAPAKPMPTPSKNPALSRAASPTVRSR---------PWKPSDMPGFSLETPPNLRTT-- 350
Cdd:PHA03247 2818 LPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRppsrspaakPAAPARPPVRRLARPAVSRSTes 2897

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  351 LPERPLSATRGRPGAPSSRSgsvEPGGPPGGRPRRQSCSPSRGRAPMYSSGSSVPAvnrGYSKASDNVSPVMMGTKMVER 430
Cdd:PHA03247 2898 FALPPDQPERPPQPQAPPPP---QPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPA---GAGEPSGAVPQPWLGALVPGR 2971

                         330       340       350
                  ....*....|....*....|....*....|..
gi 145330705  431 VINMRKLAPPRSDDKGSPHGNLSAKSSSPDSA 462
Cdd:PHA03247 2972 VAVPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003
KAR9 pfam08580
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ...
 146-330 5.41e-07

Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.


Pssm-ID: 430088 [Multi-domain]  Cd Length: 684  Bit Score: 52.52  E-value: 5.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  146 PATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSAG 225
Cdd:pfam08580 468 INSKLRRESKLPQIASTLKQTKRPSKIPRASPNHSGFLSTPSNTATSETPTPALRPPSRPQPPPPGNRPRWNASTNTNDL 547

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  226 SV--TRSTPSTTTKSAGPSRSTTPLSrstarsstpTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIKPSSP 303
Cdd:pfam08580 548 DVghNFKPLTLTTPSPTPSRSSRSSS---------TLPPVSPLSRDKSRSPAPTCRSVSRASRRRASRKPTRIGSPNSRT 618

                         170       180
                  ....*....|....*....|....*..
gi 145330705  304 APAKPMPTPskNPALSRAASPTVRSRP 330
Cdd:pfam08580 619 SLLDEPPYP--KLTLSKGLPRTPRNRQ 643
PHA03247 PHA03247
large tegument protein UL36; Provisional
 142-415 2.03e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 2.03e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  142 PGSRPATP--TGRSSTLTANSKSSRPSTPtsRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTS 219
Cdd:PHA03247 2573 PAPRPSEPavTSRARRPDAPPQSARPRAP--VDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPE 2650

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  220 TARSAGSVTR-STPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQI 298
Cdd:PHA03247 2651 RPRDDPAPGRvSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQ 2730

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  299 K----PSSPAPAKPMPTPSKNPALSRAASPTVRSRPWKPSdmPGFSLETPPNLRTTLPERPlSATRGRPGAPSSRSGS-V 373
Cdd:PHA03247 2731 AspalPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPA--PPAAPAAGPPRRLTRPAVA-SLSESRESLPSPWDPAdP 2807

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 145330705  374 EPGGPPGGRPRRQSCSPSRGRAPMYSSGSSVPAVNRGYSKAS 415
Cdd:PHA03247 2808 PAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPS 2849
PHA03247 PHA03247
large tegument protein UL36; Provisional
 42-372 8.26e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 8.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705   42 PSRKAAPDDF--LNSEGDKNDYEWLLTPPGTPLFPSLEMeshrTMMSQTGDSKSRPATLTSrlANSSTESAARNHLTSRQ 119
Cdd:PHA03247 2683 PRRRAARPTVgsLTSLADPPPPPPTPEPAPHALVSATPL----PPGPAAARQASPALPAAP--APPAVPAGPATPGGPAR 2756

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  120 QTSSPGLSSSSGASRRPSSSGGPGSRPATPTGRSSTLTANSKSSrPSTPTSRATVSSATRPSLTNSRStvSATTKPTPMS 199
Cdd:PHA03247 2757 PARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPS-PWDPADPPAAVLAPAAALPPAAS--PAGPLPPPTS 2833

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  200 RSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTAR---SSTPTSRPTLPPSKTISRSSTP 276
Cdd:PHA03247 2834 AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARpavSRSTESFALPPDQPERPPQPQA 2913

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  277 TRRPIASASAATTTANPTISQIKPSSPAPakPMPTPskNPALSRAASPTVRSrPWKPSDMPGFSLETPPNLRTTLPERPL 356
Cdd:PHA03247 2914 PPPPQPQPQPPPPPQPQPPPPPPPRPQPP--LAPTT--DPAGAGEPSGAVPQ-PWLGALVPGRVAVPRFRVPQPAPSREA 2988

                         330
                  ....*....|....*...
gi 145330705  357 SA--TRGRPGAPSSRSGS 372
Cdd:PHA03247 2989 PAssTPPLTGHSLSRVSS 3006
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 140-410 3.44e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 43.62  E-value: 3.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  140 GGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKP--- 216
Cdd:PHA03307   99 SPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPlss 178

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  217 TTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTL-----PPSKTISRSSTPTRRPIASASAATTTA 291
Cdd:PHA03307  179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRsaaddAGASSSDSSSSESSGCGWGPENECPLP 258

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  292 NPTISQIKPSSPAPAKPMPTPSKNPALSRAASPTVRSRPWKPSDMPGFSLETPP------------NLRTTLPERPLSAT 359
Cdd:PHA03307  259 RPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPrasssssssresSSSSTSSSSESSRG 338

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 145330705  360 RG-RPGAPSSRSGSVEPGGPPGGRPRRQSCSPSRGRAPMYSSGSSVPAVNRG 410
Cdd:PHA03307  339 AAvSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRA 390
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
96-268 4.23e-04

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 43.20  E-value: 4.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  96 ATLTSRLANSSTESAARNHLTSRQQTSSPGLSSSSGASRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVS 175
Cdd:COG3469   43 VSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSV 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705 176 SATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARS 255
Cdd:COG3469  123 TSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTA 202

                        170
                 ....*....|...
gi 145330705 256 STPTSRPTLPPSK 268
Cdd:COG3469  203 TTTGPPTPGLPKH 215
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
 80-273 8.44e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 42.21  E-value: 8.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705   80 SHRTMMSQTGDSKSRPATLTSR---LANSSTESAARNHLTSRQQTSSPGLSSSSGASRRPSSSGG--PGSRPATPTGRSS 154
Cdd:pfam05109 416 THKVIFSKAPESTTTSPTLNTTgfaAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGttSGASPVTPSPSPR 495

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  155 TLTANSKSSRPSTPTSRATVSSAtrpsltNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPST 234
Cdd:pfam05109 496 DNGTESKAPDMTSPTSAVTTPTP------NATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNA 569

                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 145330705  235 TTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISRS 273
Cdd:pfam05109 570 TIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHT 608
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 26-397 9.04e-04

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.47  E-value: 9.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705   26 SKHGTSPVFNISSGA----PPSRKAAPDDFLNSEGDKNDYEWLLTPPGTPLFPSLEMESHRTMMSQTGDSKSRPATLTSR 101
Cdd:PHA03307   47 SAELAAVTVVAGAAAcdrfEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASP 126

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  102 LANSSTESA----ARNHLTSRQQTSSPGLSSSSGASRRPSSSGGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSA 177
Cdd:PHA03307  127 PPSPAPDLSemlrPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP 206

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  178 TRPSLTNSRSTVSATTKPTPMS------RSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRS 251
Cdd:PHA03307  207 PRRSSPISASASSPAPAPGRSAaddagaSSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  252 tARSSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISqikPSSPAPAKPMPTPSKNPALSRAASPTVRSRPW 331
Cdd:PHA03307  287 -SSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTS---SSSESSRGAAVSPGPSPSRSPSPSRPPPPADP 362

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 145330705  332 KPSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPSSRSGSVEPGGPPGGRPRRQSCSPSRGRAPM 397
Cdd:PHA03307  363 SSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYA 428
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 140-324 2.36e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.74  E-value: 2.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705 140 GGPGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTS 219
Cdd:PRK07764 596 GGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGG 675

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705 220 TARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISRSSTPTRRPIASASAATTTANPTISQIK 299
Cdd:PRK07764 676 AAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAP 755

                        170       180
                 ....*....|....*....|....*
gi 145330705 300 PSSPAPAKPMPTPSKNPALSRAASP 324
Cdd:PRK07764 756 AQPPPPPAPAPAAAPAAAPPPSPPS 780
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
150-297 3.27e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 40.11  E-value: 3.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705 150 TGRSSTLTANSKSSR-PSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSagSVT 228
Cdd:PRK13335  18 TGAITVTTQSVKAEKiQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKI--EKI 95

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 145330705 229 RSTPSTTTKSA---GPSRSTTPLSRSTARSSTPTSRPTLPPSktisrSSTPTrrPIaSASAATTTANPTISQ 297
Cdd:PRK13335  96 SQPKQEEQKSLnisATPAPKQEQSQTTTESTTPKTKVTTPPS-----TNTPQ--PM-QSTKSDTPQSPTIKQ 159
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
 142-368 7.32e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 39.17  E-value: 7.32e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  142 PGSRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMsRSTSLSSSRLTPTASKPTTSTA 221
Cdd:pfam17823 100 PATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASA-APRAAIAAASAPHAASPAPRTA 178

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  222 RSAGSVTRSTP----------STTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISRSSTP---TRRPIASASAAT 288
Cdd:pfam17823 179 ASSTTAASSTTaassapttaaSSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAavgTVTPAALATLAA 258

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705  289 TTANPTISQIKPSSPAPAKPMPTPSKN-PALSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPS 367
Cdd:pfam17823 259 AAGTVASAAGTINMGDPHARRLSPAKHmPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPK 338


                  .
gi 145330705  368 S 368
Cdd:pfam17823 339 S 339
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
169-266 7.78e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 39.07  E-value: 7.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705 169 TSRATVSSATRPSLTNSRSTVSATTKPTPmsrsTSLSSSRLTPTASKPTTSTArsagSVTRSTPSTTTKSAGPSRSTTPL 248
Cdd:PRK11907  19 TASNPKLAQAEEIVTTTPATSTEAEQTTP----VESDATEEADNTETPVAATT----AAEAPSSSETAETSDPTSEATDT 90

                         90
                 ....*....|....*...
gi 145330705 249 SRSTARSSTPTSRPTLPP 266
Cdd:PRK11907  91 TTSEARTVTPAATETSKP 108
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 211-323 9.70e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 38.64  E-value: 9.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145330705 211 PTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISRSSTPTrrpiasasaattt 290
Cdd:PRK14950 365 APQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKL------------- 431

                         90       100       110
                 ....*....|....*....|....*....|...
gi 145330705 291 anPTISQIKPSSPAPAKPMPTPSKNPALSRAAS 323
Cdd:PRK14950 432 --TRAAIPVDEKPKYTPPAPPKEEEKALIADGD 462
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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