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Conserved domains on  [gi|145331421|ref|NP_001078069|]
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Auxin-responsive GH3 family protein [Arabidopsis thaliana]

Protein Classification

GH3 auxin-responsive promoter family protein( domain architecture ID 12043298)

GH3 auxin-responsive promoter family protein such as Arabidopsis thaliana jasmonic acid-amido synthetase JAR1 and indole-3-acetic acid-amido synthetase GH3.10, which catalyze the synthesis of jasmonates-amino acid conjugates and indole-3-acetic acid (IAA)-amino acid conjugates, respectively

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GH3 pfam03321
GH3 auxin-responsive promoter;
1-476 0e+00

GH3 auxin-responsive promoter;


:

Pssm-ID: 460885  Cd Length: 531  Bit Score: 616.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421    1 MVDGDtSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFpidDNGKALQFIFSSKQYISTGG 80
Cdd:pfam03321  63 IANGE-PNILTSDPITWFALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGG 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421   81 VPVGTATTNVYRNPNFKagmksITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWE 160
Cdd:pfam03321 139 LPAGPASTSYYKSDPFL-----LKRLYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWE 213

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  161 EIVTDIKDGVLSNRI-TVPSVRTAMSK-LLTPNPELAETIRTKCMSlsNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLR 238
Cdd:pfam03321 214 ELCEDIRTGTLSNVInTDPSLRLALSKrLLGPNPELADELEEECEK--GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLR 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  239 HYAGDLPLVSHDYGSSEGWIAANVTPrLSPEEATFAVIPNLGYFEFLPVSETGEGEE--KPVGLTQVKIGEEYEVVITNY 316
Cdd:pfam03321 292 HYFGGLPLVSEGYAASEGFFGINLDP-LCPPDVSYTLLPNSAYFEFIPVEEDEDEEEnpETLDLVEVEVGKEYELVVTTY 370

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  317 AGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSeeKIEVIDFSSYIDVS-TDPGH 395
Cdd:pfam03321 371 AGLYRYRIGDVVRVTGFYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKELT--GAELVDFTSYADTSeSIPGH 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  396 YAIFWEISGETNEDVLQDCCNCLDRAFIDA--GYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVK 473
Cdd:pfam03321 449 YVLFWELKDEPDLEVLEEFCKVLDESLQEDnsDYRAKRKDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVN 528


                  ...
gi 145331421  474 PSN 476
Cdd:pfam03321 529 SRE 531
 
Name Accession Description Interval E-value
GH3 pfam03321
GH3 auxin-responsive promoter;
1-476 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 616.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421    1 MVDGDtSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFpidDNGKALQFIFSSKQYISTGG 80
Cdd:pfam03321  63 IANGE-PNILTSDPITWFALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGG 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421   81 VPVGTATTNVYRNPNFKagmksITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWE 160
Cdd:pfam03321 139 LPAGPASTSYYKSDPFL-----LKRLYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWE 213

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  161 EIVTDIKDGVLSNRI-TVPSVRTAMSK-LLTPNPELAETIRTKCMSlsNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLR 238
Cdd:pfam03321 214 ELCEDIRTGTLSNVInTDPSLRLALSKrLLGPNPELADELEEECEK--GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLR 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  239 HYAGDLPLVSHDYGSSEGWIAANVTPrLSPEEATFAVIPNLGYFEFLPVSETGEGEE--KPVGLTQVKIGEEYEVVITNY 316
Cdd:pfam03321 292 HYFGGLPLVSEGYAASEGFFGINLDP-LCPPDVSYTLLPNSAYFEFIPVEEDEDEEEnpETLDLVEVEVGKEYELVVTTY 370

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  317 AGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSeeKIEVIDFSSYIDVS-TDPGH 395
Cdd:pfam03321 371 AGLYRYRIGDVVRVTGFYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKELT--GAELVDFTSYADTSeSIPGH 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  396 YAIFWEISGETNEDVLQDCCNCLDRAFIDA--GYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVK 473
Cdd:pfam03321 449 YVLFWELKDEPDLEVLEEFCKVLDESLQEDnsDYRAKRKDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVN 528


                  ...
gi 145331421  474 PSN 476
Cdd:pfam03321 529 SRE 531
PLN02249 PLN02249
indole-3-acetic acid-amido synthetase
 3-496 2.92e-140

indole-3-acetic acid-amido synthetase


Pssm-ID: 177891  Cd Length: 597  Bit Score: 416.38  E-value: 2.92e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421   3 DGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVP 82
Cdd:PLN02249  90 NGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLP 169

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  83 VGTATTNVYRNPNFKAgmKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEI 162
Cdd:PLN02249 170 ARPALTSYYKSDHFRT--SDYDNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKEL 247

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 163 VTDIKDGVLSNRITVPSVRTAMSKLLT-PNPELAETIRTKCmSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYA 241
Cdd:PLN02249 248 AQDISTGTLSSKIFDPAIKNRMSKILNkPDQELAEFLIGVC-SQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYS 326

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 242 GDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVSETGEG---EEKPVGLTQVKIGEEYEVVITNYAG 318
Cdd:PLN02249 327 GGLPMASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGaldETSLVELADVEVGKEYELVITTYAG 406

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 319 LYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPGHYAI 398
Cdd:PLN02249 407 LYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVI 486

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 399 FWEISGE------TNEDVLQDCCNCLDRAfIDAGYVSSRKC-KTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRC 471
Cdd:PLN02249 487 YWELLGRdqsnalPSDEVMAKCCLEMEES-LNSVYRQSRVSdKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRC 565

                        490       500
                 ....*....|....*....|....*
gi 145331421 472 VkpSNAKVLQILCENVVSSYFSTAF 496
Cdd:PLN02249 566 V--SLTPIMELLDSRVVSAHFSPSL 588
 
Name Accession Description Interval E-value
GH3 pfam03321
GH3 auxin-responsive promoter;
1-476 0e+00

GH3 auxin-responsive promoter;


Pssm-ID: 460885  Cd Length: 531  Bit Score: 616.53  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421    1 MVDGDtSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFpidDNGKALQFIFSSKQYISTGG 80
Cdd:pfam03321  63 IANGE-PNILTSDPITWFALSSGTTGGKPKLIPVTKESLERYHRLYSLSSGVMPRYF---YKGKALYFLYVPEEGKTPGG 138

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421   81 VPVGTATTNVYRNPNFKagmksITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWE 160
Cdd:pfam03321 139 LPAGPASTSYYKSDPFL-----LKRLYTSPDEVILCPDSKQSMYCHLLCGLLQRNEVGRIGAAFASTLVRAIRLLEEHWE 213

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  161 EIVTDIKDGVLSNRI-TVPSVRTAMSK-LLTPNPELAETIRTKCMSlsNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLR 238
Cdd:pfam03321 214 ELCEDIRTGTLSNVInTDPSLRLALSKrLLGPNPELADELEEECEK--GWKGIVPRLWPNLKYVFCIGTGSMAPYIPKLR 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  239 HYAGDLPLVSHDYGSSEGWIAANVTPrLSPEEATFAVIPNLGYFEFLPVSETGEGEE--KPVGLTQVKIGEEYEVVITNY 316
Cdd:pfam03321 292 HYFGGLPLVSEGYAASEGFFGINLDP-LCPPDVSYTLLPNSAYFEFIPVEEDEDEEEnpETLDLVEVEVGKEYELVVTTY 370

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  317 AGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSeeKIEVIDFSSYIDVS-TDPGH 395
Cdd:pfam03321 371 AGLYRYRIGDVVRVTGFYNQAPRLEFVGRTNVVLSIFGEKTTEEDLQKAVEEAAKELT--GAELVDFTSYADTSeSIPGH 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  396 YAIFWEISGETNEDVLQDCCNCLDRAFIDA--GYVSSRKCKTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRCVK 473
Cdd:pfam03321 449 YVLFWELKDEPDLEVLEEFCKVLDESLQEDnsDYRAKRKDGSLGPLEIRVVKPGTFEKLMERAISRGASGGQYKVPRLVN 528


                  ...
gi 145331421  474 PSN 476
Cdd:pfam03321 529 SRE 531
PLN02249 PLN02249
indole-3-acetic acid-amido synthetase
 3-496 2.92e-140

indole-3-acetic acid-amido synthetase


Pssm-ID: 177891  Cd Length: 597  Bit Score: 416.38  E-value: 2.92e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421   3 DGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGGVP 82
Cdd:PLN02249  90 NGDRSPILSSHPITEFLTSSGTSAGERKLMPTIEEDIDRRQLLGSLLMPVMNLYVPGLDKGKGLYFLFVKSESKTSGGLP 169

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  83 VGTATTNVYRNPNFKAgmKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWEEI 162
Cdd:PLN02249 170 ARPALTSYYKSDHFRT--SDYDNVYTSPNEAILCSDSSQSMYAQMLCGLLMRHEVLRLGAVFPSGLLRAISFLQNNWKEL 247

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 163 VTDIKDGVLSNRITVPSVRTAMSKLLT-PNPELAETIRTKCmSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHYA 241
Cdd:PLN02249 248 AQDISTGTLSSKIFDPAIKNRMSKILNkPDQELAEFLIGVC-SQENWEGIITKIWPNTKYLDVIVTGAMAQYIPMLEYYS 326

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 242 GDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVSETGEG---EEKPVGLTQVKIGEEYEVVITNYAG 318
Cdd:PLN02249 327 GGLPMASTIYASSESYFGINLNPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGaldETSLVELADVEVGKEYELVITTYAG 406

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 319 LYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSYIDVSTDPGHYAI 398
Cdd:PLN02249 407 LYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYAETKTIPGHYVI 486

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 399 FWEISGE------TNEDVLQDCCNCLDRAfIDAGYVSSRKC-KTIGALELRVVAKGTFRKIQEHFLGLGSSAGQFKMPRC 471
Cdd:PLN02249 487 YWELLGRdqsnalPSDEVMAKCCLEMEES-LNSVYRQSRVSdKSIGPLEIRVVQNGTFEELMDYAISRGSSINQYKVPRC 565

                        490       500
                 ....*....|....*....|....*
gi 145331421 472 VkpSNAKVLQILCENVVSSYFSTAF 496
Cdd:PLN02249 566 V--SLTPIMELLDSRVVSAHFSPSL 588
PLN02620 PLN02620
indole-3-acetic acid-amido synthetase
 1-493 6.64e-139

indole-3-acetic acid-amido synthetase


Pssm-ID: 166261  Cd Length: 612  Bit Score: 413.56  E-value: 6.64e-139
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421   1 MVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGG 80
Cdd:PLN02620  89 IANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYFLFIKSEAKTPGG 168

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  81 VPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWE 160
Cdd:PLN02620 169 LVARPVLTSYYKSSHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWT 248

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 161 EIVTDIKDGVLSNRITVPSVRTAMSKLLTPNPELAETIRTKCmSLSNWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRHY 240
Cdd:PLN02620 249 LLCRDIRTGTIDSQITDPSVREAVMKILKPDPKLADFVEAEC-RKESWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYY 327

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 241 AGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPV--------------SETGEGEEKPVGLTQVKIG 306
Cdd:PLN02620 328 SNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMAYFEFLPVhrnngvtnsislpkSLNEKEQQELVDLVDVKLG 407

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 307 EEYEVVITNYAGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIEVIDFSSY 386
Cdd:PLN02620 408 QEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVNHLVPFDASLTEYTSY 487

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 387 IDVSTDPGHYAIFWEI--SGET--NEDVLQDCCNCLDRAFiDAGYVSSRKC-KTIGALELRVVAKGTFRKIQEHFLGLGS 461
Cdd:PLN02620 488 ADTSTIPGHYVLFWELclNGSTpiPPSVFEDCCLTIEESL-NSVYRQGRVSdKSIGPLEIKIVEPGTFDKLMDYAISLGA 566

                        490       500       510
                 ....*....|....*....|....*....|..
gi 145331421 462 SAGQFKMPRCVKpsNAKVLQILCENVVSSYFS 493
Cdd:PLN02620 567 SINQYKTPRCVK--FAPIIELLNSRVVSNYFS 596
PLN02247 PLN02247
indole-3-acetic acid-amido synthetase
 1-493 9.05e-130

indole-3-acetic acid-amido synthetase


Pssm-ID: 165890  Cd Length: 606  Bit Score: 389.69  E-value: 9.05e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421   1 MVDGDTSPILTGHPVPAISLSSGTSQGRPKFIPFTDELMENTLQLFRTAFAFRNRDFPIDDNGKALQFIFSSKQYISTGG 80
Cdd:PLN02247  77 IANGESSSIISAQPITELLTSSGTSGGQPKLMPSTAEELDRKTFFYNLLVPVMNKYVDGLDQGKGMYLLFIKPEISTPSG 156

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421  81 VPVGTATTNVYRNPNFKAGMKSITSPSCSPDEVIFSPDVHQALYCHLLSGILFRDQVQYVFAVFAHGLVHAFRTFEQVWE 160
Cdd:PLN02247 157 LMARPVLTSYYKSSNFRNRPFNRYNVYTSPDETILCQDSKQSMYCQLLCGLVQRDEVLRVGAVFASAFLRAIKFLEDHWK 236

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 161 EIVTDIKDGVLSNRITVPSVRTAMSKLLT-PNPELAETIRTKCMSLSnWYGLIPALFPNAKYVYGIMTGSMEPYVPKLRH 239
Cdd:PLN02247 237 ELCSNIRTGCVSDWITDPSCRNAVSSILSkPNSELADLIESECSGKS-WEGIIKRLWPRTKYIEVIVTGSMAQYIPTLEF 315

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 240 YAGDLPLVSHDYGSSEGWIAANVTPRLSPEEATFAVIPNLGYFEFLPVsETGEGEEKP--------------------VG 299
Cdd:PLN02247 316 YSGGLPLVSTMYASSECYFGINLKPLSDPSDVSYTLLPNMAYFEFLPV-DKNNGEVIHfvqcngtdddddalkedleiVD 394

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 300 LTQVKIGEEYEVVITNYAGLYRYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDLQLSVESAAKRLSEEKIE 379
Cdd:PLN02247 395 LVDVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQAKLLLEPLGFL 474

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145331421 380 VIDFSSYIDVSTDPGHYAIFWEISGETNED-------VLQDCCNCLDRAfIDAGYvssRKC----KTIGALELRVVAKGT 448
Cdd:PLN02247 475 LTEYTSYADTSSIPGHYVLFWELKTRGSNDppeldpkIMEQCCSTVEES-LDSVY---RRCrkrdKSIGPLEIRVVKHGT 550

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*
gi 145331421 449 FRKIQEHFLGLGSSAGQFKMPRCVKPSNAkvLQILCENVVSSYFS 493
Cdd:PLN02247 551 FDALMDFCVSQGSSVNQYKTPRCIKSEEA--LKILDSRVIGRFFS 593
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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