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Conserved domains on  [gi|385862188|ref|NP_001078899|]
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uncharacterized protein C17orf67 precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4543 super family cl20946
Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins ...
 17-90 1.26e-39

Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins in this family are typically between and 90 amino acids in length. The human member of this family is C17orf67.


The actual alignment was detected with superfamily member pfam15076:

Pssm-ID: 373535  Cd Length: 74  Bit Score: 125.81  E-value: 1.26e-39
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 385862188  17 FSETSPILTEKQAKQLLRSRRQDRPSKPGFPDEPMREYMHHLLALEHRAEEQFLEHWLNPHCKPHCDRNRIHPV 90
Cdd:pfam15076  1 FTDASPILKEKQAKQLLRTKRQDRPRKAGYPDEPMREHMLYLQRLEQRAEEQFLEHWLNPHCYPHCDRNYVHPV 74
 
Name Accession Description Interval E-value
DUF4543 pfam15076
Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins ...
 17-90 1.26e-39

Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins in this family are typically between and 90 amino acids in length. The human member of this family is C17orf67.


Pssm-ID: 373535  Cd Length: 74  Bit Score: 125.81  E-value: 1.26e-39
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 385862188  17 FSETSPILTEKQAKQLLRSRRQDRPSKPGFPDEPMREYMHHLLALEHRAEEQFLEHWLNPHCKPHCDRNRIHPV 90
Cdd:pfam15076  1 FTDASPILKEKQAKQLLRTKRQDRPRKAGYPDEPMREHMLYLQRLEQRAEEQFLEHWLNPHCYPHCDRNYVHPV 74
 
Name Accession Description Interval E-value
DUF4543 pfam15076
Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins ...
 17-90 1.26e-39

Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins in this family are typically between and 90 amino acids in length. The human member of this family is C17orf67.


Pssm-ID: 373535  Cd Length: 74  Bit Score: 125.81  E-value: 1.26e-39
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 385862188  17 FSETSPILTEKQAKQLLRSRRQDRPSKPGFPDEPMREYMHHLLALEHRAEEQFLEHWLNPHCKPHCDRNRIHPV 90
Cdd:pfam15076  1 FTDASPILKEKQAKQLLRTKRQDRPRKAGYPDEPMREHMLYLQRLEQRAEEQFLEHWLNPHCYPHCDRNYVHPV 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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