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Conserved domains on  [gi|157823095|ref|NP_001099881|]
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probable glutathione peroxidase 8 [Rattus norvegicus]

Protein Classification

glutathione peroxidase( domain architecture ID 10798236)

glutathione peroxidase catalyzes the reduction of hydroperoxides using GSH as a specific electron donor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
46-198 3.01e-110

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


:

Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 312.15  E-value: 3.01e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095   46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:TIGR02540   1 DFYSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157823095  126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQMI 198
Cdd:TIGR02540  81 ARRNYGVTFPMFSKIKILGSEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
 
Name Accession Description Interval E-value
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
46-198 3.01e-110

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 312.15  E-value: 3.01e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095   46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:TIGR02540   1 DFYSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157823095  126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQMI 198
Cdd:TIGR02540  81 ARRNYGVTFPMFSKIKILGSEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
GSH_Peroxidase cd00340
Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a ...
46-194 3.26e-71

Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.


Pssm-ID: 238207 [Multi-domain]  Cd Length: 152  Bit Score: 213.15  E-value: 3.26e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTdKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:cd00340    1 SIYDFSVKDIDGEPVSLSKYKGKVLLIVNVASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEF 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157823095 126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSSK----KEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHV 194
Cdd:cd00340   80 CETNYGVTFPMFAKIDVNGENAHPLYKYLKEEAPgllgKDIKWNFTKFLVDRDGEVVKRFAPTTDPEELEKDI 152
BtuE COG0386
Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid ...
46-201 1.18e-58

Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism];


Pssm-ID: 440155 [Multi-domain]  Cd Length: 161  Bit Score: 181.43  E-value: 1.18e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTdKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:COG0386    3 SIYDFSVTTLDGEPVSLSDYKGKVLLIVNTASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIAEF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSSK-----KEPRWNFWKYLVNPEGQVVKFWRPeepleAIRPHVSQMIGQ 200
Cdd:COG0386   82 CSLNYGVTFPMFAKIDVNGPNAHPLYKYLKEEAPgllggGDIKWNFTKFLIDRDGNVVARFAP-----TTKPEDPELEAA 156

                 .
gi 157823095 201 I 201
Cdd:COG0386  157 I 157
PTZ00256 PTZ00256
glutathione peroxidase; Provisional
42-200 1.34e-45

glutathione peroxidase; Provisional


Pssm-ID: 173495 [Multi-domain]  Cd Length: 183  Bit Score: 149.14  E-value: 1.34e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  42 PRINSFYSFEVKDAKGRMVSLEKFKG-KASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSK 120
Cdd:PTZ00256  15 PPTKSFFEFEAIDIDGQLVQLSKFKGkKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCNQFMEQEPWDEP 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 121 EVESFARKNYGVTFPIFHKIKILGPEAEPAFRFL------VDSSKKEPR---WNFWKYLVNPEGQVVKFWRPEEPLEAIR 191
Cdd:PTZ00256  95 EIKEYVQKKFNVDFPLFQKIEVNGENTHEIYKYLrrnselFQNNTNEARqipWNFAKFLIDGQGKVVKYFSPKVNPNEMI 174

                 ....*....
gi 157823095 192 PHVSQMIGQ 200
Cdd:PTZ00256 175 QDIEKLLNA 183
GSHPx pfam00255
Glutathione peroxidase;
47-154 2.88e-40

Glutathione peroxidase;


Pssm-ID: 395197  Cd Length: 108  Bit Score: 133.25  E-value: 2.88e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095   47 FYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKsYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESFA 126
Cdd:pfam00255   1 IYEFSAKDIDGEPVPFDQYRGKVVLIVNVASKCGLTPQ-YTQLEELQERYKDRGLVILGFPCNQFGKQEPGSNEEIKYFC 79
                          90       100
                  ....*....|....*....|....*...
gi 157823095  127 RKNYGVTFPIFHKIKILGPEAEPAFRFL 154
Cdd:pfam00255  80 PGGYGVTFPLFSKIEVNGEKAHPVYKFL 107
 
Name Accession Description Interval E-value
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
46-198 3.01e-110

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 312.15  E-value: 3.01e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095   46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:TIGR02540   1 DFYSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157823095  126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQMI 198
Cdd:TIGR02540  81 ARRNYGVTFPMFSKIKILGSEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
GSH_Peroxidase cd00340
Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a ...
46-194 3.26e-71

Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.


Pssm-ID: 238207 [Multi-domain]  Cd Length: 152  Bit Score: 213.15  E-value: 3.26e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTdKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:cd00340    1 SIYDFSVKDIDGEPVSLSKYKGKVLLIVNVASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEF 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157823095 126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSSK----KEPRWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHV 194
Cdd:cd00340   80 CETNYGVTFPMFAKIDVNGENAHPLYKYLKEEAPgllgKDIKWNFTKFLVDRDGEVVKRFAPTTDPEELEKDI 152
BtuE COG0386
Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid ...
46-201 1.18e-58

Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism];


Pssm-ID: 440155 [Multi-domain]  Cd Length: 161  Bit Score: 181.43  E-value: 1.18e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTdKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:COG0386    3 SIYDFSVTTLDGEPVSLSDYKGKVLLIVNTASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIAEF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSSK-----KEPRWNFWKYLVNPEGQVVKFWRPeepleAIRPHVSQMIGQ 200
Cdd:COG0386   82 CSLNYGVTFPMFAKIDVNGPNAHPLYKYLKEEAPgllggGDIKWNFTKFLIDRDGNVVARFAP-----TTKPEDPELEAA 156

                 .
gi 157823095 201 I 201
Cdd:COG0386  157 I 157
PTZ00256 PTZ00256
glutathione peroxidase; Provisional
42-200 1.34e-45

glutathione peroxidase; Provisional


Pssm-ID: 173495 [Multi-domain]  Cd Length: 183  Bit Score: 149.14  E-value: 1.34e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  42 PRINSFYSFEVKDAKGRMVSLEKFKG-KASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSK 120
Cdd:PTZ00256  15 PPTKSFFEFEAIDIDGQLVQLSKFKGkKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCNQFMEQEPWDEP 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 121 EVESFARKNYGVTFPIFHKIKILGPEAEPAFRFL------VDSSKKEPR---WNFWKYLVNPEGQVVKFWRPEEPLEAIR 191
Cdd:PTZ00256  95 EIKEYVQKKFNVDFPLFQKIEVNGENTHEIYKYLrrnselFQNNTNEARqipWNFAKFLIDGQGKVVKYFSPKVNPNEMI 174

                 ....*....
gi 157823095 192 PHVSQMIGQ 200
Cdd:PTZ00256 175 QDIEKLLNA 183
GSHPx pfam00255
Glutathione peroxidase;
47-154 2.88e-40

Glutathione peroxidase;


Pssm-ID: 395197  Cd Length: 108  Bit Score: 133.25  E-value: 2.88e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095   47 FYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKsYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESFA 126
Cdd:pfam00255   1 IYEFSAKDIDGEPVPFDQYRGKVVLIVNVASKCGLTPQ-YTQLEELQERYKDRGLVILGFPCNQFGKQEPGSNEEIKYFC 79
                          90       100
                  ....*....|....*....|....*...
gi 157823095  127 RKNYGVTFPIFHKIKILGPEAEPAFRFL 154
Cdd:pfam00255  80 PGGYGVTFPLFSKIEVNGEKAHPVYKFL 107
PLN02412 PLN02412
probable glutathione peroxidase
46-200 2.92e-36

probable glutathione peroxidase


Pssm-ID: 166053 [Multi-domain]  Cd Length: 167  Bit Score: 124.72  E-value: 2.92e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:PLN02412   8 SIYDFTVKDIGGNDVSLNQYKGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQFLGQEPGSNEEIQQT 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLvdssKKEP--------RWNFWKYLVNPEGQVVKFWRPEEPLEAIRPHVSQM 197
Cdd:PLN02412  88 VCTRFKAEFPIFDKVDVNGKNTAPLYKYL----KAEKgglfgdaiKWNFTKFLVSKEGKVVQRYAPTTSPLKIEKDIQNL 163

                 ...
gi 157823095 198 IGQ 200
Cdd:PLN02412 164 LGQ 166
PLN02399 PLN02399
phospholipid hydroperoxide glutathione peroxidase
46-183 3.27e-36

phospholipid hydroperoxide glutathione peroxidase


Pssm-ID: 178021 [Multi-domain]  Cd Length: 236  Bit Score: 126.94  E-value: 3.27e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:PLN02399  78 SVHDFTVKDIDGKDVALSKFKGKVLLIVNVASKCGLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQF 157
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 157823095 126 ARKNYGVTFPIFHKIKILGPEAEPAFRFLVDSS----KKEPRWNFWKYLVNPEGQVVKFWRP 183
Cdd:PLN02399 158 ACTRFKAEFPIFDKVDVNGPSTAPVYQFLKSNAggflGDLIKWNFEKFLVDKNGKVVERYPP 219
btuE PRK10606
putative glutathione peroxidase; Provisional
45-191 6.34e-36

putative glutathione peroxidase; Provisional


Pssm-ID: 182585 [Multi-domain]  Cd Length: 183  Bit Score: 124.50  E-value: 6.34e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  45 NSFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTdKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVES 124
Cdd:PRK10606   3 DSILTTVVTTIDGEVTTLEKYAGNVLLIVNVASKCGLT-PQYEQLENIQKAWADQGFVVLGFPCNQFLGQEPGSDEEIKT 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 125 FARKNYGVTFPIFHKIKILGPEAEPAFRFLVD------------------SSKKEPR------WNFWKYLVNPEGQVVKF 180
Cdd:PRK10606  82 YCRTTWGVTFPMFSKIEVNGEGRHPLYQKLIAaaptavapeesgfyarmvSKGRAPLypddilWNFEKFLVGRDGQVIQR 161
                        170
                 ....*....|....*..
gi 157823095 181 WR----PEEP--LEAIR 191
Cdd:PRK10606 162 FSpdmtPEDPivMESIK 178
PTZ00056 PTZ00056
glutathione peroxidase; Provisional
46-199 3.15e-31

glutathione peroxidase; Provisional


Pssm-ID: 240248 [Multi-domain]  Cd Length: 199  Bit Score: 113.02  E-value: 3.15e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESF 125
Cdd:PTZ00056  18 SIYDYTVKTLEGTTVPMSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQFLNQEFPNTKDIRKF 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 126 ARKNyGVTFPIFHKIKILGPEAEPAFRFLV---------DSSKKEPRWNFWKYLVNPEGQVVKFWRPE-EPLEAIrPHVS 195
Cdd:PTZ00056  98 NDKN-KIKYNFFEPIEVNGENTHELFKFLKancdsmhdeNGTLKAIGWNFGKFLVNKSGNVVAYFSPRtEPLELE-KKIA 175

                 ....
gi 157823095 196 QMIG 199
Cdd:PTZ00056 176 ELLG 179
Bcp COG1225
Peroxiredoxin [Posttranslational modification, protein turnover, chaperones];
50-206 2.56e-09

Peroxiredoxin [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440838 [Multi-domain]  Cd Length: 136  Bit Score: 53.33  E-value: 2.56e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  50 FEVKDAKGRMVSLEKFKGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFpcnqfgeSePKSSKEVESFARKn 129
Cdd:COG1225    4 FTLPDLDGKTVSLSDLRGKPVVLYFYATWCPGCTAELPELRDLYEEFKDKGVEVLGV-------S-SDSDEAHKKFAEK- 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095 130 YGVTFPIF----HKI-KILGPEAEPAFrflvdsskkeprwnfwkYLVNPEGQVVKFWRPEEPLeaiRPHVSQMIGQIILK 204
Cdd:COG1225   75 YGLPFPLLsdpdGEVaKAYGVRGTPTT-----------------FLIDPDGKIRYVWVGPVDP---RPHLEEVLEALLAE 134

                 ..
gi 157823095 205 KK 206
Cdd:COG1225  135 LK 136
TlpA_like_family cd02966
TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are ...
50-180 3.89e-06

TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.


Pssm-ID: 239264 [Multi-domain]  Cd Length: 116  Bit Score: 44.15  E-value: 3.89e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  50 FEVKDAKGRMVSLEKFKGKAsLVVNV-ASDCRFTDKSYETLRELHKEFGPYHFNVLAFpcNqFGESEPkssKEVESFARK 128
Cdd:cd02966    2 FSLPDLDGKPVSLSDLKGKV-VLVNFwASWCPPCRAEMPELEALAKEYKDDGVEVVGV--N-VDDDDP---AAVKAFLKK 74
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 157823095 129 nYGVTFPIfhkikILGPEAEPAFRFLVDSSkkePRWnfwkYLVNPEGQVVKF 180
Cdd:cd02966   75 -YGITFPV-----LLDPDGELAKAYGVRGL---PTT----FLIDRDGRIRAR 113
AhpC-TSA pfam00578
AhpC/TSA family; This family contains proteins related to alkyl hydroperoxide reductase (AhpC) ...
49-156 6.55e-06

AhpC/TSA family; This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).


Pssm-ID: 425763 [Multi-domain]  Cd Length: 124  Bit Score: 43.75  E-value: 6.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095   49 SFEVKDAKGRMVSLEKFKGKASLVVNVASD-CRFTDKSYETLRELHKEFGPYHFNVLAFPCNqfgesepkSSKEVESFAR 127
Cdd:pfam00578   7 DFELPDGDGGTVSLSDYRGKWVVLFFYPADwTPVCTTELPALADLYEEFKKLGVEVLGVSVD--------SPESHKAFAE 78
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 157823095  128 KnYGVTFPIFH--------KIKILGPEAEPAFR--FLVD 156
Cdd:pfam00578  79 K-YGLPFPLLSdpdgevarAYGVLNEEEGGALRatFVID 116
TrxA COG0526
Thiol-disulfide isomerase or thioredoxin [Posttranslational modification, protein turnover, ...
46-200 2.55e-05

Thiol-disulfide isomerase or thioredoxin [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440292 [Multi-domain]  Cd Length: 139  Bit Score: 42.37  E-value: 2.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  46 SFYSFEVKDAKGRMVSLEKFKGKAsLVVNV-ASDCRFTDKSYETLRELHKEFGPYHFNVLAfpcnqFGESEPKsskeVES 124
Cdd:COG0526    7 PAPDFTLTDLDGKPLSLADLKGKP-VLVNFwATWCPPCRAEMPVLKELAEEYGGVVFVGVD-----VDENPEA----VKA 76
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157823095 125 FARKnYGVTFPIfhkikILGPEAEPAFRFLVDSSkkePRWnfwkYLVNPEGQVVKFWRPEEPLEAIRPHVSQMIGQ 200
Cdd:COG0526   77 FLKE-LGLPYPV-----LLDPDGELAKAYGVRGI---PTT----VLIDKDGKIVARHVGPLSPEELEEALEKLLAK 139
PRX_like1 cd02969
Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. ...
49-135 2.45e-03

Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.


Pssm-ID: 239267 [Multi-domain]  Cd Length: 171  Bit Score: 37.22  E-value: 2.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157823095  49 SFEVKDAKGRMVSLEKF-KGKASLVVNVASDCRFTDKSYETLRELHKEFGPYHFNVLAFPCNQFGESEPKSSKEVESFAr 127
Cdd:cd02969    6 DFSLPDTDGKTYSLADFaDGKALVVMFICNHCPYVKAIEDRLNRLAKEYGAKGVAVVAINSNDIEAYPEDSPENMKAKA- 84

                 ....*...
gi 157823095 128 KNYGVTFP 135
Cdd:cd02969   85 KEHGYPFP 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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