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Conserved domains on  [gi|157820693|ref|NP_001102861|]
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protein mab-21-like 2 [Rattus norvegicus]

Protein Classification

Mab-21 family protein( domain architecture ID 10505530)

Mab-21 family protein, similar to Caenorhabditis elegans Mab-21 (Protein male abnormal 21) which acts in a cell autonomous fashion to specify the properties of the sensory ray and non-autonomously in the choice of hypodermal versus neuroblast cell fate

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Mab-21 pfam03281
Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like ...
 62-242 1.62e-47

Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


:

Pssm-ID: 460873  Cd Length: 191  Bit Score: 159.51  E-value: 1.62e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693   62 RYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSlPGCAVLKLSD---------GRKRSMSLWVEFiTASGYLSARKIRSRF 132
Cdd:pfam03281   1 YYENLKVLSPDEFDVMLPLRGPMNDLIIVMGV-PGYVVLKLTRwryylhnpvGRPESLSQWLEF-TAEGYLSAAKVLSRF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693  133 QTLVAQAVDKC---SYRDVVKMIADTSEVKLRI---RERYVVQITPAFKCTGIWPRSaAQWPMPHIPWPGPNRVAEVKAE 206
Cdd:pfam03281  79 QSLVEKALNTVndsIYGLVYKREKGGPAVTLAIetsEDQYSVDLVPAIECPGIWPKS-ARWPRCLKRWPSQKVLRKIKSE 157

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 157820693  207 GFNLLSKECYsltgKQSSAESDAWVLQFGEAENRLL 242
Cdd:pfam03281 158 GFHLVAKSSP----WPSSDENYSWRLSFSQAEKVLL 189
Mab-21_C pfam20266
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 246-344 2.68e-35

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


:

Pssm-ID: 466416  Cd Length: 102  Bit Score: 124.66  E-value: 2.68e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693  246 CRNKCLSVLKTLRD---RHLELPGQPLNNYHMKTLLLYECEKHPRETDWDEACLGDRLNGILLQLISCLQCRRCPHYFLP 322
Cdd:pfam20266   1 CRKKCLRILKKLKEpgkRDVKTELSKICSYHLKTLFLWECEKHPDDSDWDKENLSDRFLGLLEELHKCLRNGKLPHFFIP 80

                          90       100
                  ....*....|....*....|..
gi 157820693  323 NLDLFQGKPHSALESAAKQTWR 344
Cdd:pfam20266  81 KLNLFQSLSRKELDDLAKKLED 102
 
Name Accession Description Interval E-value
Mab-21 pfam03281
Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like ...
 62-242 1.62e-47

Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 460873  Cd Length: 191  Bit Score: 159.51  E-value: 1.62e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693   62 RYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSlPGCAVLKLSD---------GRKRSMSLWVEFiTASGYLSARKIRSRF 132
Cdd:pfam03281   1 YYENLKVLSPDEFDVMLPLRGPMNDLIIVMGV-PGYVVLKLTRwryylhnpvGRPESLSQWLEF-TAEGYLSAAKVLSRF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693  133 QTLVAQAVDKC---SYRDVVKMIADTSEVKLRI---RERYVVQITPAFKCTGIWPRSaAQWPMPHIPWPGPNRVAEVKAE 206
Cdd:pfam03281  79 QSLVEKALNTVndsIYGLVYKREKGGPAVTLAIetsEDQYSVDLVPAIECPGIWPKS-ARWPRCLKRWPSQKVLRKIKSE 157

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 157820693  207 GFNLLSKECYsltgKQSSAESDAWVLQFGEAENRLL 242
Cdd:pfam03281 158 GFHLVAKSSP----WPSSDENYSWRLSFSQAEKVLL 189
Mab-21_C pfam20266
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 246-344 2.68e-35

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 466416  Cd Length: 102  Bit Score: 124.66  E-value: 2.68e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693  246 CRNKCLSVLKTLRD---RHLELPGQPLNNYHMKTLLLYECEKHPRETDWDEACLGDRLNGILLQLISCLQCRRCPHYFLP 322
Cdd:pfam20266   1 CRKKCLRILKKLKEpgkRDVKTELSKICSYHLKTLFLWECEKHPDDSDWDKENLSDRFLGLLEELHKCLRNGKLPHFFIP 80

                          90       100
                  ....*....|....*....|..
gi 157820693  323 NLDLFQGKPHSALESAAKQTWR 344
Cdd:pfam20266  81 KLNLFQSLSRKELDDLAKKLED 102
 
Name Accession Description Interval E-value
Mab-21 pfam03281
Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like ...
 62-242 1.62e-47

Mab-21 protein nucleotidyltransferase domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 460873  Cd Length: 191  Bit Score: 159.51  E-value: 1.62e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693   62 RYEGLEVISPTEFEVVLYLNQMGVFNFVDDGSlPGCAVLKLSD---------GRKRSMSLWVEFiTASGYLSARKIRSRF 132
Cdd:pfam03281   1 YYENLKVLSPDEFDVMLPLRGPMNDLIIVMGV-PGYVVLKLTRwryylhnpvGRPESLSQWLEF-TAEGYLSAAKVLSRF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693  133 QTLVAQAVDKC---SYRDVVKMIADTSEVKLRI---RERYVVQITPAFKCTGIWPRSaAQWPMPHIPWPGPNRVAEVKAE 206
Cdd:pfam03281  79 QSLVEKALNTVndsIYGLVYKREKGGPAVTLAIetsEDQYSVDLVPAIECPGIWPKS-ARWPRCLKRWPSQKVLRKIKSE 157

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 157820693  207 GFNLLSKECYsltgKQSSAESDAWVLQFGEAENRLL 242
Cdd:pfam03281 158 GFHLVAKSSP----WPSSDENYSWRLSFSQAEKVLL 189
Mab-21_C pfam20266
Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In ...
 246-344 2.68e-35

Mab-21 protein HhH/H2TH-like domain; This family contains Mab-21 and Mab-21 like proteins. In C. elegans these proteins are required for several aspects of embryonic development.


Pssm-ID: 466416  Cd Length: 102  Bit Score: 124.66  E-value: 2.68e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820693  246 CRNKCLSVLKTLRD---RHLELPGQPLNNYHMKTLLLYECEKHPRETDWDEACLGDRLNGILLQLISCLQCRRCPHYFLP 322
Cdd:pfam20266   1 CRKKCLRILKKLKEpgkRDVKTELSKICSYHLKTLFLWECEKHPDDSDWDKENLSDRFLGLLEELHKCLRNGKLPHFFIP 80

                          90       100
                  ....*....|....*....|..
gi 157820693  323 NLDLFQGKPHSALESAAKQTWR 344
Cdd:pfam20266  81 KLNLFQSLSRKELDDLAKKLED 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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