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Conserved domains on  [gi|163915105|ref|NP_001106539|]
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uncharacterized protein C17orf67 homolog precursor [Xenopus tropicalis]

Protein Classification

DUF4543 domain-containing protein( domain architecture ID 10633399)

DUF4543 domain-containing protein similar to Mus musculus protein C17orf67 homolog

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4543 pfam15076
Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins ...
 17-90 6.76e-47

Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins in this family are typically between and 90 amino acids in length. The human member of this family is C17orf67.


:

Pssm-ID: 373535  Cd Length: 74  Bit Score: 143.91  E-value: 6.76e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 163915105  17 FTDASPILPEKQAKQVLRAKRSDRERKAGHRDEPMREYMLYLQRLEQRSEEQFFEHWWNPHCQPHCNRNIVNPV 90
Cdd:pfam15076  1 FTDASPILKEKQAKQLLRTKRQDRPRKAGYPDEPMREHMLYLQRLEQRAEEQFLEHWLNPHCYPHCDRNYVHPV 74
 
Name Accession Description Interval E-value
DUF4543 pfam15076
Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins ...
 17-90 6.76e-47

Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins in this family are typically between and 90 amino acids in length. The human member of this family is C17orf67.


Pssm-ID: 373535  Cd Length: 74  Bit Score: 143.91  E-value: 6.76e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 163915105  17 FTDASPILPEKQAKQVLRAKRSDRERKAGHRDEPMREYMLYLQRLEQRSEEQFFEHWWNPHCQPHCNRNIVNPV 90
Cdd:pfam15076  1 FTDASPILKEKQAKQLLRTKRQDRPRKAGYPDEPMREHMLYLQRLEQRAEEQFLEHWLNPHCYPHCDRNYVHPV 74
 
Name Accession Description Interval E-value
DUF4543 pfam15076
Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins ...
 17-90 6.76e-47

Domain of unknown function (DUF4543); This family of proteins is found in eukaryotes. Proteins in this family are typically between and 90 amino acids in length. The human member of this family is C17orf67.


Pssm-ID: 373535  Cd Length: 74  Bit Score: 143.91  E-value: 6.76e-47
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 163915105  17 FTDASPILPEKQAKQVLRAKRSDRERKAGHRDEPMREYMLYLQRLEQRSEEQFFEHWWNPHCQPHCNRNIVNPV 90
Cdd:pfam15076  1 FTDASPILKEKQAKQLLRTKRQDRPRKAGYPDEPMREHMLYLQRLEQRAEEQFLEHWLNPHCYPHCDRNYVHPV 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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