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Conserved domains on  [gi|238479105|ref|NP_001154475|]
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S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Arabidopsis thaliana]

Protein Classification

class I SAM-dependent methyltransferase( domain architecture ID 708142)

class I SAM-dependent methyltransferase catalyzes the methylation of one or more specific substrates using S-adenosyl-L-methionine (SAM or AdoMet) as the methyl donor; similar to Arabidopsis thaliana methyltransferase PMTs

CATH:  2.20.25.110
EC:  2.1.1.-
Gene Ontology:  GO:0032259|GO:0008757|GO:0008168|GO:1904047
PubMed:  12504684|12826405
SCOP:  3000118

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Methyltransf_29 super family cl28725
Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative ...
 155-676 1.43e-162

Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase.


The actual alignment was detected with superfamily member pfam03141:

Pssm-ID: 335237 [Multi-domain]  Cd Length: 506  Bit Score: 477.18  E-value: 1.43e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  155 NFVPCFNVSEN--LALGYSNGDENDRFC-GPGSKQECLELPPVKYRVPLRWPTGKDIIWHSNVKITAQEVVSSGsitKRM 231
Cdd:pfam03141   1 DYIPCLDNKRAikFLLSRERMEHRERHCpPPEEKLNCLVPPPDGYKTPIPWPKSRDKVWYANVPHTKLAEEKGG---QNW 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  232 MMMEDDQISFRSASPM-SDEVEDYSHQIAEMIgikkdNFIEAG--VRTILDIGCGYGSFGAHLLSKQILTMCIA---NYE 305
Cdd:pfam03141  78 VKVEGDKFTFPGGGTQfPHGADQYIDFIAQMI-----PDIAWGgrVRTALDVGCGVASFGAYLLSRDVLTMSFApkdVHE 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  306 AsgsQVQLTLERGLPAMIGSFISKQLPYPSLSFDMLHCLRCGIDWDQKDGLLLVEIDRVLKPGGYFVWTSPLTNPRNKDH 385
Cdd:pfam03141 153 A---QVQFALERGIPAMLGVLGTKRLPYPSRSFDLAHCSRCRIPWTANDGILLLEVDRVLRPGGYFVLSGPPVYARTEED 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  386 LKR-WNFVHDFAESICWTLLNQQDETVVWKKTINTKCYSSRKPGVGPSVCTKGHDVESPYYRPLQMCI------GGTRSR 458
Cdd:pfam03141 230 LQEiWKEMEDLTKSLCWKLVAKKGDIAIWQKPLNNSCYNKREPGKKPPLCKDSDDPDAAWYVPMEACItplpevSHEVGG 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  459 RWIPiegrtRWPSRSNMNK---TELSLYGLHPEVLGEDAENWKITVREYWSLLSPLIFSDHpkrpgdedpsppynmLRNV 535
Cdd:pfam03141 310 GWPE-----PWPARLTAVPprlSSGQIGGVSPESFKADTELWKKRVNKYKRLLKLGIDWGK---------------VRNV 369

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  536 LDMNAQFGGLNSALLEarKSVWVMNVVPTAGPNHLPMILDRGFVGVLHNWCEPFPTYPRTYDLVHADNLLSLQtsqpRKT 615
Cdd:pfam03141 370 MDMNAGFGGFAAALID--LPVWVMNVVPVDSPNTLPVIYDRGLIGIYHDWCEAFSTYPRTYDLLHADHLFSLY----KKR 443

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 238479105  616 CLLIDIFTEIDRLLRPEGWVIIRDTAQLVEKARETITQLKWEARVIEVESSSEQR--LLICQK 676
Cdd:pfam03141 444 CNLVDILLEMDRILRPEGFVIIRDSVDVLDKVKKIAKAMRWEVRMTDTEDGPHVPekILIAQK 506
 
Name Accession Description Interval E-value
Methyltransf_29 pfam03141
Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative ...
 155-676 1.43e-162

Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase.


Pssm-ID: 335237 [Multi-domain]  Cd Length: 506  Bit Score: 477.18  E-value: 1.43e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  155 NFVPCFNVSEN--LALGYSNGDENDRFC-GPGSKQECLELPPVKYRVPLRWPTGKDIIWHSNVKITAQEVVSSGsitKRM 231
Cdd:pfam03141   1 DYIPCLDNKRAikFLLSRERMEHRERHCpPPEEKLNCLVPPPDGYKTPIPWPKSRDKVWYANVPHTKLAEEKGG---QNW 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  232 MMMEDDQISFRSASPM-SDEVEDYSHQIAEMIgikkdNFIEAG--VRTILDIGCGYGSFGAHLLSKQILTMCIA---NYE 305
Cdd:pfam03141  78 VKVEGDKFTFPGGGTQfPHGADQYIDFIAQMI-----PDIAWGgrVRTALDVGCGVASFGAYLLSRDVLTMSFApkdVHE 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  306 AsgsQVQLTLERGLPAMIGSFISKQLPYPSLSFDMLHCLRCGIDWDQKDGLLLVEIDRVLKPGGYFVWTSPLTNPRNKDH 385
Cdd:pfam03141 153 A---QVQFALERGIPAMLGVLGTKRLPYPSRSFDLAHCSRCRIPWTANDGILLLEVDRVLRPGGYFVLSGPPVYARTEED 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  386 LKR-WNFVHDFAESICWTLLNQQDETVVWKKTINTKCYSSRKPGVGPSVCTKGHDVESPYYRPLQMCI------GGTRSR 458
Cdd:pfam03141 230 LQEiWKEMEDLTKSLCWKLVAKKGDIAIWQKPLNNSCYNKREPGKKPPLCKDSDDPDAAWYVPMEACItplpevSHEVGG 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  459 RWIPiegrtRWPSRSNMNK---TELSLYGLHPEVLGEDAENWKITVREYWSLLSPLIFSDHpkrpgdedpsppynmLRNV 535
Cdd:pfam03141 310 GWPE-----PWPARLTAVPprlSSGQIGGVSPESFKADTELWKKRVNKYKRLLKLGIDWGK---------------VRNV 369

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  536 LDMNAQFGGLNSALLEarKSVWVMNVVPTAGPNHLPMILDRGFVGVLHNWCEPFPTYPRTYDLVHADNLLSLQtsqpRKT 615
Cdd:pfam03141 370 MDMNAGFGGFAAALID--LPVWVMNVVPVDSPNTLPVIYDRGLIGIYHDWCEAFSTYPRTYDLLHADHLFSLY----KKR 443

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 238479105  616 CLLIDIFTEIDRLLRPEGWVIIRDTAQLVEKARETITQLKWEARVIEVESSSEQR--LLICQK 676
Cdd:pfam03141 444 CNLVDILLEMDRILRPEGFVIIRDSVDVLDKVKKIAKAMRWEVRMTDTEDGPHVPekILIAQK 506
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 253-372 3.29e-09

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 55.77  E-value: 3.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105 253 DYSHQIAEMIGIKKDnfieagvRTILDIGCGYGSFGAHL-----------LSKQILTMCIANYEASGSQVQLTLerglpa 321
Cdd:COG2226    9 DGREALLAALGLRPG-------ARVLDLGCGTGRLALALaergarvtgvdISPEMLELARERAAEAGLNVEFVV------ 75

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 238479105 322 miGSFisKQLPYPSLSFD---MLHCLRCGIDWDQkdglLLVEIDRVLKPGGYFV 372
Cdd:COG2226   76 --GDA--EDLPFPDGSFDlviSSFVLHHLPDPER----ALAEIARVLKPGGRLV 121
PKS_MT smart00828
Methyltransferase in polyketide synthase (PKS) enzymes;
275-381 6.98e-06

Methyltransferase in polyketide synthase (PKS) enzymes;


Pssm-ID: 214839 [Multi-domain]  Cd Length: 224  Bit Score: 47.80  E-value: 6.98e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105   275 RTILDIGCGYGSFGAHLlSKQILTMCIANYEASGSQVQLTLER----GLPAMIGSFI--SKQLPYPS-----LSFDMLHC 343
Cdd:smart00828   1 KRVLDFGCGYGSDLIDL-AERHPHLQLHGYTISPEQAEVGRERiralGLQGRIRIFYrdSAKDPFPDtydlvFGFEVIHH 79

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 238479105   344 LRcgiDWDQkdglLLVEIDRVLKPGGYFVWTSPLTNPR 381
Cdd:smart00828  80 IK---DKMD----LFSNISRHLKDGGHLVLADFIANLL 110
PLN02244 PLN02244
tocopherol O-methyltransferase
 250-369 2.23e-03

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 40.88  E-value: 2.23e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105 250 EVEDYSHQIAE--MI-------GIKKDNfiEAGVRTILDIGCGYGSFGAHLLSK---QILTMCIANYEASGSQvQLTLER 317
Cdd:PLN02244  88 GASRGDHRQAQirMIeeslawaGVPDDD--EKRPKRIVDVGCGIGGSSRYLARKygaNVKGITLSPVQAARAN-ALAAAQ 164

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 238479105 318 GLPAMIGSFISKQL--PYPSLSFDMLHCLRCGIDWDQKdGLLLVEIDRVLKPGG 369
Cdd:PLN02244 165 GLSDKVSFQVADALnqPFEDGQFDLVWSMESGEHMPDK-RKFVQELARVAAPGG 217
 
Name Accession Description Interval E-value
Methyltransf_29 pfam03141
Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative ...
 155-676 1.43e-162

Putative S-adenosyl-L-methionine-dependent methyltransferase; This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase.


Pssm-ID: 335237 [Multi-domain]  Cd Length: 506  Bit Score: 477.18  E-value: 1.43e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  155 NFVPCFNVSEN--LALGYSNGDENDRFC-GPGSKQECLELPPVKYRVPLRWPTGKDIIWHSNVKITAQEVVSSGsitKRM 231
Cdd:pfam03141   1 DYIPCLDNKRAikFLLSRERMEHRERHCpPPEEKLNCLVPPPDGYKTPIPWPKSRDKVWYANVPHTKLAEEKGG---QNW 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  232 MMMEDDQISFRSASPM-SDEVEDYSHQIAEMIgikkdNFIEAG--VRTILDIGCGYGSFGAHLLSKQILTMCIA---NYE 305
Cdd:pfam03141  78 VKVEGDKFTFPGGGTQfPHGADQYIDFIAQMI-----PDIAWGgrVRTALDVGCGVASFGAYLLSRDVLTMSFApkdVHE 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  306 AsgsQVQLTLERGLPAMIGSFISKQLPYPSLSFDMLHCLRCGIDWDQKDGLLLVEIDRVLKPGGYFVWTSPLTNPRNKDH 385
Cdd:pfam03141 153 A---QVQFALERGIPAMLGVLGTKRLPYPSRSFDLAHCSRCRIPWTANDGILLLEVDRVLRPGGYFVLSGPPVYARTEED 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  386 LKR-WNFVHDFAESICWTLLNQQDETVVWKKTINTKCYSSRKPGVGPSVCTKGHDVESPYYRPLQMCI------GGTRSR 458
Cdd:pfam03141 230 LQEiWKEMEDLTKSLCWKLVAKKGDIAIWQKPLNNSCYNKREPGKKPPLCKDSDDPDAAWYVPMEACItplpevSHEVGG 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  459 RWIPiegrtRWPSRSNMNK---TELSLYGLHPEVLGEDAENWKITVREYWSLLSPLIFSDHpkrpgdedpsppynmLRNV 535
Cdd:pfam03141 310 GWPE-----PWPARLTAVPprlSSGQIGGVSPESFKADTELWKKRVNKYKRLLKLGIDWGK---------------VRNV 369

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  536 LDMNAQFGGLNSALLEarKSVWVMNVVPTAGPNHLPMILDRGFVGVLHNWCEPFPTYPRTYDLVHADNLLSLQtsqpRKT 615
Cdd:pfam03141 370 MDMNAGFGGFAAALID--LPVWVMNVVPVDSPNTLPVIYDRGLIGIYHDWCEAFSTYPRTYDLLHADHLFSLY----KKR 443

                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 238479105  616 CLLIDIFTEIDRLLRPEGWVIIRDTAQLVEKARETITQLKWEARVIEVESSSEQR--LLICQK 676
Cdd:pfam03141 444 CNLVDILLEMDRILRPEGFVIIRDSVDVLDKVKKIAKAMRWEVRMTDTEDGPHVPekILIAQK 506
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 253-372 3.29e-09

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 55.77  E-value: 3.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105 253 DYSHQIAEMIGIKKDnfieagvRTILDIGCGYGSFGAHL-----------LSKQILTMCIANYEASGSQVQLTLerglpa 321
Cdd:COG2226    9 DGREALLAALGLRPG-------ARVLDLGCGTGRLALALaergarvtgvdISPEMLELARERAAEAGLNVEFVV------ 75

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 238479105 322 miGSFisKQLPYPSLSFD---MLHCLRCGIDWDQkdglLLVEIDRVLKPGGYFV 372
Cdd:COG2226   76 --GDA--EDLPFPDGSFDlviSSFVLHHLPDPER----ALAEIARVLKPGGRLV 121
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 278-372 1.35e-07

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 49.97  E-value: 1.35e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  278 LDIGCGYGSFGAHL--LSKQILTMCIANYEASGSQvQLTLERGLPAMIGSFisKQLPYPSLSFD------MLHCLrcgID 349
Cdd:pfam08241   1 LDVGCGTGLLTELLarLGARVTGVDISPEMLELAR-EKAPREGLTFVVGDA--EDLPFPDNSFDlvlsseVLHHV---ED 74

                          90       100
                  ....*....|....*....|...
gi 238479105  350 WDQkdglLLVEIDRVLKPGGYFV 372
Cdd:pfam08241  75 PER----ALREIARVLKPGGILI 93
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 277-369 2.68e-07

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 49.10  E-value: 2.68e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  277 ILDIGCGYGSFGAHL------------LSKQILTMCIANYEASGSQVQLtlerglpaMIGSFisKQLPYPSLSFDMLHCL 344
Cdd:pfam13649   1 VLDLGCGTGRLTLALarrggarvtgvdLSPEMLERARERAAEAGLNVEF--------VQGDA--EDLPFPDGSFDLVVSS 70

                          90       100
                  ....*....|....*....|....*..
gi 238479105  345 R--CGIDWDQKDGLLLvEIDRVLKPGG 369
Cdd:pfam13649  71 GvlHHLPDPDLEAALR-EIARVLKPGG 96
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
 276-409 5.20e-06

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 46.64  E-value: 5.20e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105  276 TILDIGCGYGSFGaHLLSKQILTMC-IANYEASGSQVQLTLER-------GLPAMIGSFISKQLPYPSLSFDMLHClRCG 347
Cdd:pfam13847   6 RVLDLGCGTGHLS-FELAEELGPNAeVVGIDISEEAIEKARENaqklgfdNVEFEQGDIEELPELLEDDKFDVVIS-NCV 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 238479105  348 IDwDQKDGLL-LVEIDRVLKPGGYFVWTSPLTNPRNKDHLKRWNFVHdfaeSICWTLLNQQDE 409
Cdd:pfam13847  84 LN-HIPDPDKvLQEILRVLKPGGRLIISDPDSLAELPAHVKEDSTYY----AGCVGGAILKKK 141
PKS_MT smart00828
Methyltransferase in polyketide synthase (PKS) enzymes;
275-381 6.98e-06

Methyltransferase in polyketide synthase (PKS) enzymes;


Pssm-ID: 214839 [Multi-domain]  Cd Length: 224  Bit Score: 47.80  E-value: 6.98e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105   275 RTILDIGCGYGSFGAHLlSKQILTMCIANYEASGSQVQLTLER----GLPAMIGSFI--SKQLPYPS-----LSFDMLHC 343
Cdd:smart00828   1 KRVLDFGCGYGSDLIDL-AERHPHLQLHGYTISPEQAEVGRERiralGLQGRIRIFYrdSAKDPFPDtydlvFGFEVIHH 79

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 238479105   344 LRcgiDWDQkdglLLVEIDRVLKPGGYFVWTSPLTNPR 381
Cdd:smart00828  80 IK---DKMD----LFSNISRHLKDGGHLVLADFIANLL 110
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 247-372 1.45e-05

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 45.01  E-value: 1.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105 247 MSD--EVEDYSHQIAEMIgikkDNFIEAGvRTILDIGCGYGSFGAHL-----------LSKQILTMCIANYEASGSQ-VQ 312
Cdd:COG2227    1 MSDpdARDFWDRRLAALL----ARLLPAG-GRVLDVGCGTGRLALALarrgadvtgvdISPEALEIARERAAELNVDfVQ 75

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 238479105 313 LTLErglpamigsfiskQLPYPSLSFD------MLHCLRcgiDWDQkdglLLVEIDRVLKPGGYFV 372
Cdd:COG2227   76 GDLE-------------DLPLEDGSFDlvicseVLEHLP---DPAA----LLRELARLLKPGGLLL 121
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 273-386 1.79e-03

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 40.28  E-value: 1.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105 273 GVRTILDIGCGYGSFGAHL------------LSKQILTMCIANYEASG-SQVQLtlerglpaMIGSFI-SKQLPYPS--- 335
Cdd:COG0500   26 KGGRVLDLGCGTGRNLLALaarfggrvigidLSPEAIALARARAAKAGlGNVEF--------LVADLAeLDPLPAESfdl 97

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 238479105 336 -LSFDMLHCLRcgidwDQKDGLLLVEIDRVLKPGGYFVWTSPLTNPRNKDHL 386
Cdd:COG0500   98 vVAFGVLHHLP-----PEEREALLRELARALKPGGVLLLSASDAAAALSLAR 144
PLN02244 PLN02244
tocopherol O-methyltransferase
 250-369 2.23e-03

tocopherol O-methyltransferase


Pssm-ID: 215135 [Multi-domain]  Cd Length: 340  Bit Score: 40.88  E-value: 2.23e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 238479105 250 EVEDYSHQIAE--MI-------GIKKDNfiEAGVRTILDIGCGYGSFGAHLLSK---QILTMCIANYEASGSQvQLTLER 317
Cdd:PLN02244  88 GASRGDHRQAQirMIeeslawaGVPDDD--EKRPKRIVDVGCGIGGSSRYLARKygaNVKGITLSPVQAARAN-ALAAAQ 164

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 238479105 318 GLPAMIGSFISKQL--PYPSLSFDMLHCLRCGIDWDQKdGLLLVEIDRVLKPGG 369
Cdd:PLN02244 165 GLSDKVSFQVADALnqPFEDGQFDLVWSMESGEHMPDK-RKFVQELARVAAPGG 217
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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