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Conserved domains on  [gi|320544331|ref|NP_001188998|]
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over compensating males, isoform B [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MGA_dom pfam16059
MGA, conserved domain; This domain can be found in the MAX gene-associated protein (Mga), ...
 771-821 4.34e-25

MGA, conserved domain; This domain can be found in the MAX gene-associated protein (Mga), which is a dual-specificity transcription factor that contains both a bHLHZip domain and a T-box domain and is able to bind to and regulate transcriptional targets through both E-box sites as well as T-box-binding elements (TBEs).


:

Pssm-ID: 464998  Cd Length: 51  Bit Score: 99.48  E-value: 4.34e-25
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 320544331   771 KADANKPCSKDYCHLGCICASLAGTELPVRDHCGRAECVLDCRCLSAEESR 821
Cdd:pfam16059    1 AKDAKKPCDKDYCQLGCVCDSLAGTRPPKREHCGRADCVLGCVCTGAEKQR 51
PRK12323 super family cl46901
DNA polymerase III subunit gamma/tau;
1933-2053 4.17e-03

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK12323:

Pssm-ID: 481241 [Multi-domain]  Cd Length: 700  Bit Score: 42.17  E-value: 4.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320544331 1933 KAASSTATVTAARAP--VVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAA----------GRKSLPANAKTPVAT 2000
Cdd:PRK12323  378 AAAPVAQPAPAAAAPaaAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAlaaarqasarGPGGAPAPAPAPAAA 457

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 320544331 2001 P--RQSQPVACDKPPLVSGSTLPALVEPSArkslpsKPLAAGEHLRPRQSLPAKV 2053
Cdd:PRK12323  458 PaaAARPAAAGPRPVAAAAAAAPARAAPAA------APAPADDDPPPWEELPPEF 506
 
Name Accession Description Interval E-value
MGA_dom pfam16059
MGA, conserved domain; This domain can be found in the MAX gene-associated protein (Mga), ...
 771-821 4.34e-25

MGA, conserved domain; This domain can be found in the MAX gene-associated protein (Mga), which is a dual-specificity transcription factor that contains both a bHLHZip domain and a T-box domain and is able to bind to and regulate transcriptional targets through both E-box sites as well as T-box-binding elements (TBEs).


Pssm-ID: 464998  Cd Length: 51  Bit Score: 99.48  E-value: 4.34e-25
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 320544331   771 KADANKPCSKDYCHLGCICASLAGTELPVRDHCGRAECVLDCRCLSAEESR 821
Cdd:pfam16059    1 AKDAKKPCDKDYCQLGCVCDSLAGTRPPKREHCGRADCVLGCVCTGAEKQR 51
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
1933-2053 4.17e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.17  E-value: 4.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320544331 1933 KAASSTATVTAARAP--VVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAA----------GRKSLPANAKTPVAT 2000
Cdd:PRK12323  378 AAAPVAQPAPAAAAPaaAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAlaaarqasarGPGGAPAPAPAPAAA 457

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 320544331 2001 P--RQSQPVACDKPPLVSGSTLPALVEPSArkslpsKPLAAGEHLRPRQSLPAKV 2053
Cdd:PRK12323  458 PaaAARPAAAGPRPVAAAAAAAPARAAPAA------APAPADDDPPPWEELPPEF 506
 
Name Accession Description Interval E-value
MGA_dom pfam16059
MGA, conserved domain; This domain can be found in the MAX gene-associated protein (Mga), ...
 771-821 4.34e-25

MGA, conserved domain; This domain can be found in the MAX gene-associated protein (Mga), which is a dual-specificity transcription factor that contains both a bHLHZip domain and a T-box domain and is able to bind to and regulate transcriptional targets through both E-box sites as well as T-box-binding elements (TBEs).


Pssm-ID: 464998  Cd Length: 51  Bit Score: 99.48  E-value: 4.34e-25
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 320544331   771 KADANKPCSKDYCHLGCICASLAGTELPVRDHCGRAECVLDCRCLSAEESR 821
Cdd:pfam16059    1 AKDAKKPCDKDYCQLGCVCDSLAGTRPPKREHCGRADCVLGCVCTGAEKQR 51
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
1933-2053 4.17e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.17  E-value: 4.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320544331 1933 KAASSTATVTAARAP--VVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAA----------GRKSLPANAKTPVAT 2000
Cdd:PRK12323  378 AAAPVAQPAPAAAAPaaAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAlaaarqasarGPGGAPAPAPAPAAA 457

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 320544331 2001 P--RQSQPVACDKPPLVSGSTLPALVEPSArkslpsKPLAAGEHLRPRQSLPAKV 2053
Cdd:PRK12323  458 PaaAARPAAAGPRPVAAAAAAAPARAAPAA------APAPADDDPPPWEELPPEF 506
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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