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Conserved domains on  [gi|334187926|ref|NP_001190390|]
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Major facilitator superfamily protein [Arabidopsis thaliana]

Protein Classification

folate/biopterin family MFS transporter( domain architecture ID 13024750)

folate/biopterin family major facilitator superfamily (MFS) transporter facilitates folate monoglutamate transport involved in tetrahydrofolate biosynthesis, as well as the transport of antifolates such as methotrexate and aminopterin

CATH:  1.20.1250.20
Gene Ontology:  GO:0022857|GO:0055085|GO:0016020
SCOP:  3000310
TCDB:  2.A.71

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
48-476 7.09e-156

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 449.75  E-value: 7.09e-156
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  48 AVVSNCGINQGFGYSLGHVATDYYMKDVQKvQPSQYQALSAITRISWIIfKPLFGILTDVLPIFGFHRRPYFILAGVIGV 127
Cdd:cd17484    1 SVIAVVYFSQGVAGLSWLAVSYYYKDDLHL-GPASVQALTSIASLPWAI-KPLYGLLSDSVPIFGYRRKPYLILAGALGA 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 128 VSLLFISLQSNLHLYLALFWMTISSAAMAIADVTIDACTTYNSNKHP-SLASDMQSLCSLSYSIGELLGFFMSGILVHLV 206
Cdd:cd17484   79 LSWLALALVSNSSLALALLLLLLASLGVAFSDVVIDALVVEASRGAPqSLAGDLQSLCWGSSAIGGIVGSYFSGYLLELL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 207 GSKGVFGLLTFTFALVSVVGVLFSEPRVHGFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRALGLDIKEGLFYWFTd 286
Cdd:cd17484  159 GPRTVFAVTSFFPLLLLIVAFFVKEERVPPHRTKENFDEQLKALWETVKQPSIWLPALFIFLYQATPSSGSAMFYFMTN- 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 287 skdGPLFAQvipkqvasifskstnmlkaflvcfqETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGM 366
Cdd:cd17484  238 ---ELGFSP-------------------------EFLGRLRVIGSIASLLGVLLYNRFLKHVPFRKIFFWTTVLLVLLGL 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 367 FDLILVLRLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLHV 446
Cdd:cd17484  290 TDLILVTRWNLKLGIPDHAFVLGDDAVVTVIGEILFMPILVLAARLCPPGIEGTVFALLMSISNLGSLTSSFLGALLTKA 369
                        410       420       430
                 ....*....|....*....|....*....|
gi 334187926 447 LKVTRTEFGNLWLAVLVRNVMRLLPICFLF 476
Cdd:cd17484  370 LGVTSTNFDNLWLLILICNLSRLLPLLFLF 399
 
Name Accession Description Interval E-value
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
48-476 7.09e-156

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 449.75  E-value: 7.09e-156
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  48 AVVSNCGINQGFGYSLGHVATDYYMKDVQKvQPSQYQALSAITRISWIIfKPLFGILTDVLPIFGFHRRPYFILAGVIGV 127
Cdd:cd17484    1 SVIAVVYFSQGVAGLSWLAVSYYYKDDLHL-GPASVQALTSIASLPWAI-KPLYGLLSDSVPIFGYRRKPYLILAGALGA 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 128 VSLLFISLQSNLHLYLALFWMTISSAAMAIADVTIDACTTYNSNKHP-SLASDMQSLCSLSYSIGELLGFFMSGILVHLV 206
Cdd:cd17484   79 LSWLALALVSNSSLALALLLLLLASLGVAFSDVVIDALVVEASRGAPqSLAGDLQSLCWGSSAIGGIVGSYFSGYLLELL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 207 GSKGVFGLLTFTFALVSVVGVLFSEPRVHGFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRALGLDIKEGLFYWFTd 286
Cdd:cd17484  159 GPRTVFAVTSFFPLLLLIVAFFVKEERVPPHRTKENFDEQLKALWETVKQPSIWLPALFIFLYQATPSSGSAMFYFMTN- 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 287 skdGPLFAQvipkqvasifskstnmlkaflvcfqETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGM 366
Cdd:cd17484  238 ---ELGFSP-------------------------EFLGRLRVIGSIASLLGVLLYNRFLKHVPFRKIFFWTTVLLVLLGL 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 367 FDLILVLRLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLHV 446
Cdd:cd17484  290 TDLILVTRWNLKLGIPDHAFVLGDDAVVTVIGEILFMPILVLAARLCPPGIEGTVFALLMSISNLGSLTSSFLGALLTKA 369
                        410       420       430
                 ....*....|....*....|....*....|
gi 334187926 447 LKVTRTEFGNLWLAVLVRNVMRLLPICFLF 476
Cdd:cd17484  370 LGVTSTNFDNLWLLILICNLSRLLPLLFLF 399
BT1 pfam03092
BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative ...
57-479 2.73e-105

BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein Swiss:Q25272, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).


Pssm-ID: 308617  Cd Length: 432  Bit Score: 321.60  E-value: 2.73e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926   57 QGFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIfKPLFGILTDVLPIFGFHRRPYFILAGVIGVVSLLFISL- 135
Cdd:pfam03092   1 QGVALGLSRLATQFMLKDRLGLDPARYQRLSGLATLPWSI-KPLYGMLSDGFALFGYRRRWYLALSGLLGGAFWLLYGLl 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  136 -QSNLHLYLALFWMTISSAAMAIADVTIDACTTYNSNKHPSLASDMQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGL 214
Cdd:pfam03092  80 pASEASAPVAAAFIFLSSLGVAIVDVLVDALVSERARQSPTPGPSLQSWIWGCSAVGGIIGSVLSGPLLDTFKPQISFFV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  215 LTFTFALVSVVGVLFSE-----PRVH--------GFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRA-LGLDIKEGL 280
Cdd:pfam03092 160 TAALQLLTCVVALLIKEsslglPAKHepkrpvpcLFGLFEMNREVISRNWKAFRYSEILTPTLFAMLSQAiLPLVIAKAN 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  281 FYWFTDSKDGPLFAQvipkqvasifskstnmlkaflvcfqETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLL 360
Cdd:pfam03092 240 VFFYTTNVLGPNFSY-------------------------SFYGTVKVIGSIAGLIGVTLYNRFLKKHPYRLTFGVTTVL 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  361 FALSGMFDLILVLRLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLG 440
Cdd:pfam03092 295 QVLSGLFDLILVKRWNRYIGISDHMYILGDSIILEVLYMLKFMPVLVLLARLCPRGSESTVFALLASIANLGQSVSSSLG 374
                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 334187926  441 GKMLHVLKVTRTEFGNLWLAVLVRNVMRLLPICFLFLVP 479
Cdd:pfam03092 375 ALLMEYLGVTRCDFSNLPLLLLIGSLCTLLPLPLLGLLP 413
fbt TIGR00788
folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The ...
71-499 3.31e-56

folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. [Cell envelope, Other]


Pssm-ID: 273268  Cd Length: 468  Bit Score: 194.62  E-value: 3.31e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926   71 YMKDVQKVQPSQYQALSAITRISWIiFKPLFGILTDVLPIFGFHRRPYFILAGVIGVvSLLFISLQSNLH-LYLALFWMT 149
Cdd:TIGR00788  51 MLTDDLGLDGARYQRLVGLSSLGWA-LKPFAGVMSDTFPLFGYTKRWYLVLSGLLGS-AILYGLLPGKVSsAKVAAAFIF 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  150 ISSAAMAIADVTIDACTTYNSNKHPSLASDMQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGLLTFTFALVSVVGVLF 229
Cdd:TIGR00788 129 LAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLS 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  230 SEPRVHGF----------------SFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITralgldikeglfywftdskdgplf 293
Cdd:TIGR00788 209 KERRAFVRprigtylemnmalltlGVLANVKVQILGLRGAIQLLEIAKPLIFIFLS------------------------ 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  294 AQVIPKQVASIFSKSTNMLKAFlvcfQETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGMFDLILVL 373
Cdd:TIGR00788 265 YANLPGASGSVFCATTQCLPGG----PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVK 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  374 RLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLHVLKVTRTE 453
Cdd:TIGR00788 341 RWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDN 420
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 334187926  454 FGNLWLAVLVRNVMRLLPICFLFLVPQGDQNTFKLPAEIMGEDSEE 499
Cdd:TIGR00788 421 SNNLWLLILGHSLAPLLPLPLLHLLPRLEDVIDTEGKRAISKAAPE 466
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
57-477 4.89e-09

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 58.37  E-value: 4.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  57 QGFGYSLGHVATD-----------YYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVLPIFGFHRRPYFILAGVI 125
Cdd:COG2211   11 EKLAYGLGDLGLNlafgllsayllYFYTDVLGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRRRPWILIGAIP 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 126 GVVSLLFI----SLQSNLHLYLALFWMTISSAAMAIADVTIDACT---TYNSNKHPSLASdMQSLCSLsysIGELLGFFM 198
Cdd:COG2211   91 LALSFVLLftapDLSPTGKLIYALVTYLLLGLAYTLVNIPYSALGaelTPDYEERTRLSS-WRFAFAG---LGGLLASVL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 199 SGILVHLVGSKGVFGLLTFT--FALVSVVGVLFSEPRVHGFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRALGLDI 276
Cdd:COG2211  167 PPPLVAAFGGDAALGYRLTAliFAVLGLLAFLLTFFGTKERPVPEEEKVSLKESLKALLKNRPFLLLLLAYLLFFLALAL 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 277 KEGLFYWFtdskdgplfaqvipkqVASIFSKSTNMlkaflvcfqetVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLW 356
Cdd:COG2211  247 VAALLLYY----------------FKYVLGLSAAL-----------VGLLLALYFLAALLGAPLWPRLAKRFGKKKAFII 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 357 TQLLFALSGmfdLILVLrlnlkFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHG-------IEGTFFALLMSID 429
Cdd:COG2211  300 GLLLAALGL---LLLFF-----LGPGNLWLLLVLAALAGIGLGAILVLPWAMLADVVDYDewktgrrREGLYFGIFTFAI 371
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 334187926 430 NAGLMTSSWLGGKMLHVLKVTRTEFGNLWLAVLVRNVMRLLPICFLFL 477
Cdd:COG2211  372 KLGQALAGALAGLLLALFGYVAGAAQSPSALTGIRLLFFLLPAVLLLL 419
 
Name Accession Description Interval E-value
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
48-476 7.09e-156

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 449.75  E-value: 7.09e-156
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  48 AVVSNCGINQGFGYSLGHVATDYYMKDVQKvQPSQYQALSAITRISWIIfKPLFGILTDVLPIFGFHRRPYFILAGVIGV 127
Cdd:cd17484    1 SVIAVVYFSQGVAGLSWLAVSYYYKDDLHL-GPASVQALTSIASLPWAI-KPLYGLLSDSVPIFGYRRKPYLILAGALGA 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 128 VSLLFISLQSNLHLYLALFWMTISSAAMAIADVTIDACTTYNSNKHP-SLASDMQSLCSLSYSIGELLGFFMSGILVHLV 206
Cdd:cd17484   79 LSWLALALVSNSSLALALLLLLLASLGVAFSDVVIDALVVEASRGAPqSLAGDLQSLCWGSSAIGGIVGSYFSGYLLELL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 207 GSKGVFGLLTFTFALVSVVGVLFSEPRVHGFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRALGLDIKEGLFYWFTd 286
Cdd:cd17484  159 GPRTVFAVTSFFPLLLLIVAFFVKEERVPPHRTKENFDEQLKALWETVKQPSIWLPALFIFLYQATPSSGSAMFYFMTN- 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 287 skdGPLFAQvipkqvasifskstnmlkaflvcfqETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGM 366
Cdd:cd17484  238 ---ELGFSP-------------------------EFLGRLRVIGSIASLLGVLLYNRFLKHVPFRKIFFWTTVLLVLLGL 289
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 367 FDLILVLRLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLHV 446
Cdd:cd17484  290 TDLILVTRWNLKLGIPDHAFVLGDDAVVTVIGEILFMPILVLAARLCPPGIEGTVFALLMSISNLGSLTSSFLGALLTKA 369
                        410       420       430
                 ....*....|....*....|....*....|
gi 334187926 447 LKVTRTEFGNLWLAVLVRNVMRLLPICFLF 476
Cdd:cd17484  370 LGVTSTNFDNLWLLILICNLSRLLPLLFLF 399
BT1 pfam03092
BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative ...
57-479 2.73e-105

BT1 family; Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters. One such protein Swiss:Q25272, previously termed (and is still annotated as) ORFG, was shown to encode a biopterin transport protein using null mutants, thus being subsequently renamed BT1. The significant similarity of ORFG/BT1 to Trypanosoma brucei ESAG10 (a putative transmembrane protein and another member of this family) was previously noted. This family also contains five putative Arabidopsis thaliana proteins of unknown function. In addition, it also contains two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).


Pssm-ID: 308617  Cd Length: 432  Bit Score: 321.60  E-value: 2.73e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926   57 QGFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIfKPLFGILTDVLPIFGFHRRPYFILAGVIGVVSLLFISL- 135
Cdd:pfam03092   1 QGVALGLSRLATQFMLKDRLGLDPARYQRLSGLATLPWSI-KPLYGMLSDGFALFGYRRRWYLALSGLLGGAFWLLYGLl 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  136 -QSNLHLYLALFWMTISSAAMAIADVTIDACTTYNSNKHPSLASDMQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGL 214
Cdd:pfam03092  80 pASEASAPVAAAFIFLSSLGVAIVDVLVDALVSERARQSPTPGPSLQSWIWGCSAVGGIIGSVLSGPLLDTFKPQISFFV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  215 LTFTFALVSVVGVLFSE-----PRVH--------GFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRA-LGLDIKEGL 280
Cdd:pfam03092 160 TAALQLLTCVVALLIKEsslglPAKHepkrpvpcLFGLFEMNREVISRNWKAFRYSEILTPTLFAMLSQAiLPLVIAKAN 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  281 FYWFTDSKDGPLFAQvipkqvasifskstnmlkaflvcfqETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLL 360
Cdd:pfam03092 240 VFFYTTNVLGPNFSY-------------------------SFYGTVKVIGSIAGLIGVTLYNRFLKKHPYRLTFGVTTVL 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  361 FALSGMFDLILVLRLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLG 440
Cdd:pfam03092 295 QVLSGLFDLILVKRWNRYIGISDHMYILGDSIILEVLYMLKFMPVLVLLARLCPRGSESTVFALLASIANLGQSVSSSLG 374
                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 334187926  441 GKMLHVLKVTRTEFGNLWLAVLVRNVMRLLPICFLFLVP 479
Cdd:pfam03092 375 ALLMEYLGVTRCDFSNLPLLLLIGSLCTLLPLPLLGLLP 413
fbt TIGR00788
folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The ...
71-499 3.31e-56

folate/biopterin transporter; The Folate-Biopterin Transporter (FBT) Family (TC 2.A.71)The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity. [Cell envelope, Other]


Pssm-ID: 273268  Cd Length: 468  Bit Score: 194.62  E-value: 3.31e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926   71 YMKDVQKVQPSQYQALSAITRISWIiFKPLFGILTDVLPIFGFHRRPYFILAGVIGVvSLLFISLQSNLH-LYLALFWMT 149
Cdd:TIGR00788  51 MLTDDLGLDGARYQRLVGLSSLGWA-LKPFAGVMSDTFPLFGYTKRWYLVLSGLLGS-AILYGLLPGKVSsAKVAAAFIF 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  150 ISSAAMAIADVTIDACTTYNSNKHPSLASDMQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGLLTFTFALVSVVGVLF 229
Cdd:TIGR00788 129 LAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLS 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  230 SEPRVHGF----------------SFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITralgldikeglfywftdskdgplf 293
Cdd:TIGR00788 209 KERRAFVRprigtylemnmalltlGVLANVKVQILGLRGAIQLLEIAKPLIFIFLS------------------------ 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  294 AQVIPKQVASIFSKSTNMLKAFlvcfQETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGMFDLILVL 373
Cdd:TIGR00788 265 YANLPGASGSVFCATTQCLPGG----PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVK 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  374 RLNLKFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLHVLKVTRTE 453
Cdd:TIGR00788 341 RWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDN 420
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 334187926  454 FGNLWLAVLVRNVMRLLPICFLFLVPQGDQNTFKLPAEIMGEDSEE 499
Cdd:TIGR00788 421 SNNLWLLILGHSLAPLLPLPLLHLLPRLEDVIDTEGKRAISKAAPE 466
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
86-463 3.79e-09

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 58.59  E-value: 3.79e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  86 LSAITRISWIIFKPLFGILTDVlpifgFHRRPYFILAGVIGVVSLLFISLQSNLhlYLALFWMTISSAAMAIADVTIDAC 165
Cdd:cd06174   36 LFALFSLGYALLQPLAGLLADR-----FGRRPVLLLGLLLFALGALLFAFAPSF--WLLLLGRFLLGLGSGLIDPAVLAL 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 166 TTYNSNKHpsLASDMQSLCSLSYSIGELLGFFMSGILV--HLVGSKGVFGLLTFTFALVSVVGVLFSEPRVHGFSFK--- 240
Cdd:cd06174  109 IADLFPER--ERGRALGLLQAFGSVGGILGPLLGGILAssLGFGWRAVFLIAAALALLAAILLLLVVPDPPESARAKnee 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 241 QNFTNAMKAMWRTIKCSDVWQPSLYMFitralgldikeglFYWFTdskdgplfaqvipkqVASIFSKSTNMLKAFLVCFQ 320
Cdd:cd06174  187 ASSKSVLKLLKRVLKNPGLWLLLLAIF-------------LVNLA---------------YYSFSTLLPLFLLDLGGLSV 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 321 ETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGMFDLILVLRLNLKFGLPDYLFIVVDGIvskmiirl 400
Cdd:cd06174  239 AVAGLLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGL-------- 310
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 334187926 401 tWMVIFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLhvlkVTRTEFGNLWLAVLV 463
Cdd:cd06174  311 -LPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLL----AATFGLTGAFLVLAV 368
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
57-477 4.89e-09

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 58.37  E-value: 4.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  57 QGFGYSLGHVATD-----------YYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVLPIFGFHRRPYFILAGVI 125
Cdd:COG2211   11 EKLAYGLGDLGLNlafgllsayllYFYTDVLGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRRRPWILIGAIP 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 126 GVVSLLFI----SLQSNLHLYLALFWMTISSAAMAIADVTIDACT---TYNSNKHPSLASdMQSLCSLsysIGELLGFFM 198
Cdd:COG2211   91 LALSFVLLftapDLSPTGKLIYALVTYLLLGLAYTLVNIPYSALGaelTPDYEERTRLSS-WRFAFAG---LGGLLASVL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 199 SGILVHLVGSKGVFGLLTFT--FALVSVVGVLFSEPRVHGFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRALGLDI 276
Cdd:COG2211  167 PPPLVAAFGGDAALGYRLTAliFAVLGLLAFLLTFFGTKERPVPEEEKVSLKESLKALLKNRPFLLLLLAYLLFFLALAL 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 277 KEGLFYWFtdskdgplfaqvipkqVASIFSKSTNMlkaflvcfqetVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLW 356
Cdd:COG2211  247 VAALLLYY----------------FKYVLGLSAAL-----------VGLLLALYFLAALLGAPLWPRLAKRFGKKKAFII 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 357 TQLLFALSGmfdLILVLrlnlkFGLPDYLFIVVDGIVSKMIIRLTWMVIFVLNTKLCPHG-------IEGTFFALLMSID 429
Cdd:COG2211  300 GLLLAALGL---LLLFF-----LGPGNLWLLLVLAALAGIGLGAILVLPWAMLADVVDYDewktgrrREGLYFGIFTFAI 371
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 334187926 430 NAGLMTSSWLGGKMLHVLKVTRTEFGNLWLAVLVRNVMRLLPICFLFL 477
Cdd:COG2211  372 KLGQALAGALAGLLLALFGYVAGAAQSPSALTGIRLLFFLLPAVLLLL 419
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
59-341 1.90e-04

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 43.75  E-value: 1.90e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  59 FGYSLGHVATD-----------YYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVLPIFGFHRRPYFILAGV-IG 126
Cdd:cd17332    2 IGYGLGDFGNNlifqivstyllFFYTDVLGLSAAAAGTIFLVARIIDAINDPLMGYLIDRTRSRWGRFRPWLLWGAIpLA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 127 VVS-LLFISLQSNLH--LYLALFWMTISSAAMAIADVTIDACTtynsnkhPSLASDMQSLCSLS------YSIGELLGFF 197
Cdd:cd17332   82 LLFvLLFTTPDGSGTgkLIYALITYILLDLLYTLVNIPYTALI-------PELTDDPEERTSLTswrmffATIGGLLVTV 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 198 MSGILVHLVGSKGVFGLLTFTFALVSVVGVL------FSEPRVHGFSFKQNFTNAMKAMWRTIKCSDVWQPSLYMFITRA 271
Cdd:cd17332  155 LPPPLVAYFGGGNASRGYFLTALIIGIIGIIlllicfFGTRERVVPPEEEKSKLPLLKSLKALLKNRPFLILLLAYLLYF 234
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 334187926 272 LGLDIKEGLF-YWFTDSKDGPLFAQVIPKQVASIFSKSTNMLKAFLVCFQETVGFIlsIGSIGSILGVLLY 341
Cdd:cd17332  235 LAFNIVNTVLvYYFKYVLGGRAELVLLLLLILSGALLALLPWPPLKKRFGKKKAFF--IGLLLAILGLLLL 303
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
80-432 2.26e-04

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 43.42  E-value: 2.26e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  80 PSQYQALSAITRISWIIFKPLFGILTDVLPifgfhRRPYFILAGVIGVVSLLFISLQSNLH-LYLALFWMTISSAAMAIA 158
Cdd:COG2814   44 PAQAGLVVTAYLLGAALGAPLAGRLADRFG-----RRRVLLLGLLLFALGSLLCALAPSLWlLLAARFLQGLGAGALFPA 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 159 DVTIDACTTynsnkHPSLASDMQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGLLTFtFALVSVVGVLFSEPRVHGFS 238
Cdd:COG2814  119 ALALIADLV-----PPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAV-LALLALLLLLRLLPESRPAA 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 239 fKQNFTNAMKAMWRTikcSDVWQPSLYMFITRALGLdikeGLFYWFtdskdgPLFAQVIPKQVASifskstnmlkaflvc 318
Cdd:COG2814  193 -RARLRGSLRELLRR---PRLLLLLLLAFLLGFGFF----ALFTYL------PLYLQEVLGLSAS--------------- 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 319 fqeTVGFILSIGSIGSILGVLLYNlRLKDHPFRKLFLWTQLLFALSGMFDLILVlrlnlkfglPDYLFIVVDGIVSKMII 398
Cdd:COG2814  244 ---AAGLLLALFGLGGVLGALLAG-RLADRFGRRRLLLIGLLLLALGLLLLALA---------GSLWLLLLALFLLGFGF 310
                        330       340       350
                 ....*....|....*....|....*....|....
gi 334187926 399 RLTWMVIFVLNTKLCPHGIEGTFFALLMSIDNAG 432
Cdd:COG2814  311 GLLFPLLQALVAELAPPEARGRASGLYNSAFFLG 344
MFS_1 pfam07690
Major Facilitator Superfamily;
58-236 1.48e-03

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 40.86  E-value: 1.48e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926   58 GFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVlpifgFHRRPYFILAGVIGVVSLLFISLQS 137
Cdd:pfam07690   9 ALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDR-----FGRRRVLLIGLLLFALGLLLLLFAS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  138 NLhlYLALFWMTISSAAMAIADVTIDACTT-YNSNKHPSLAsdmQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGLLT 216
Cdd:pfam07690  84 SL--WLLLVLRVLQGLGAGALFPAALALIAdWFPPEERGRA---LGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILA 158
                         170       180
                  ....*....|....*....|
gi 334187926  217 FTFALVSVVGVLFSEPRVHG 236
Cdd:pfam07690 159 ILSLLAAVLLLLPRPPPESK 178
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
18-230 1.52e-03

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 41.02  E-value: 1.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  18 ERESNLRSVVCGPVRWLKMLASKLHWSYVFAVVSncginQGFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIF 97
Cdd:cd17325  177 PPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFV-----LAFAFGALEPFLPLYAAELGGLSPAQIGLLFGAQGLASALS 251
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  98 KPLFGILTDVLPifgfhRRPYFILAGVIGVVSLLFISLQSNLHLYLALfwMTISSAAMAIADVTIDACTTYNSnkHPSLA 177
Cdd:cd17325  252 QPPAGKLSDRIG-----RKPLILIGLLLSAVALLLLPLATSFWLLLLL--LALLGLGLGLVFPATLALLADIV--PPEGR 322
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 334187926 178 SDMQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGLLTFTFALVSVVGVLFS 230
Cdd:cd17325  323 GTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLAAAALLLLAAVLFLLLR 375
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
35-230 2.63e-03

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 40.24  E-value: 2.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  35 KMLASKLHWSYVFAVVSNCGINQGFGYSLGhVATDYYMKDVQkVQPSQYQALSAITRISWIIFKPLFGILTDvlpIFGfH 114
Cdd:COG2271    1 ARAPSRYRWRILALLFLAYFLNYLDRSNLS-VAAPPLQADLG-LSAAQLGLLASAFFLGYALGQIPAGLLAD---RFG-R 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 115 RRPYFILAGVIGVVSLLFISLQSNLHLYLALFWMTISSAAMAIADVTIdaCTTYNSNKHPSLASdmqSLCSLSYSIGELL 194
Cdd:COG2271   75 RRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKL--IAEWFPPKERGRAL---GIFNAGGPLGGAL 149
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 334187926 195 GFFMSGILVHLVGSKGVF---GLLTFTFALVSVVGVLFS 230
Cdd:COG2271  150 APPLLGWLLAAFGWRAAFlilGLPGLLLALLRFWLLALA 188
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
71-229 3.70e-03

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 39.47  E-value: 3.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  71 YMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVlpiFGFHRRPYFILAGVIGVVSLLFISLQSNlhLYLALFWMTI 150
Cdd:COG2271  206 YLVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDR---LGRRRKLVLAIGLLLAALALLLLALLPS--PALAIALLFL 280
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 151 SSAAMAIADVTIDA-CTTYNSNKHPSLASdmqSLCSLSYSIGELLGFFMSGILVHLVGSKGVFGLLTFtFALVSVVGVLF 229
Cdd:COG2271  281 AGFGLGGAFGLLWAlAAELFPKKARGTAS---GLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAA-LALLAALLALL 356
MFS_MFSD3 cd17485
Major facilitator superfamily domain containing 3 protein; Major facilitator superfamily ...
90-447 3.95e-03

Major facilitator superfamily domain containing 3 protein; Major facilitator superfamily domain containing 3 protein (MFSD3) is a predicted acetyl-CoA transporter. As an atypical putative membrane-bound solute carrier (SLC), MFSD3 is most likely to be functionally active in the plasma membrane and not in any intracellular organelles. MFSD3 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341038 [Multi-domain]  Cd Length: 386  Bit Score: 39.52  E-value: 3.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  90 TRISWI-------IFKPLFGILTD--VLPIFGFHRRPYF----ILAGVIGVVSLLFISLQSNLhLYLALFWMtisSAAMA 156
Cdd:cd17485   32 TAIGLLkllylpwVLKFLWAPLVDryGLPRLGRRRSWLLptqlGLALLLLALAFLPPTTNLLA-FLGLLFLL---NLFSA 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 157 IADVTIDACTTYNSNKHP-SLASDMQslcSLSYSIGELLGFFMSGILVHLVGSKGVFGLLTFTFALVSVVGVLFSEPRVH 235
Cdd:cd17485  108 TQDIATDGLAVELLTPEErGLGNAAQ---VVGYKLGSLLGGGGLLWLYDLIGWQSLLLSLAALYLLLLLPVLFLRELELP 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 236 GFSFKQNFTNAMKAMWRTikcsdvwqpslymFITRalgldikEGLFYWftdskdgpLFAQVIPKqvaSIFSKSTNMLKAF 315
Cdd:cd17485  185 QQPPASERGAALKASLRA-------------FLRR-------PGTRWL--------LLFLLLYK---LGEQGALAMLPPF 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 316 LVCFQ---ETVGFILSI-GSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALSGMFDLILVLRLNLKFGLPDYLFIVVDG 391
Cdd:cd17485  234 LVDRGfslSQIGLLSGVgGSLVSIAGSLLGGYLLKRRGRRRLLLLGGLLRLLLLGLYTLLALGGSGLNWVLLLASLALLH 313
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 334187926 392 IVSKMIirLTWMviFVLNTKLCPHGIEGTFFALLMSIDNAGLMTSSWLGGKMLHVL 447
Cdd:cd17485  314 LVGGMI--TTAL--FTLMMDCSQQAQAGTDYTLLATVEVLGKLLFGSLAGFLADHL 365
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
58-364 5.86e-03

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 39.14  E-value: 5.86e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  58 GFGYSLGHVATDYYMKDVQKvQPSQYQALSAITRISWIIFKPLFGILTDVLPifgfhRRPYFILA------GVIGVVSLL 131
Cdd:cd06173   12 ALGDWIFTVALPWLVLQLTG-SALLVGLVLAAFFLPFLLFSPFAGVLADRFD-----RRRLLILAdllralLAAVLALLA 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 132 FISLQSNLHLYLALFWMTISSAAMAIADVTIdacttynsnkHPSLASDMQ-----SLCSLSYSIGELLGFFMSGILVHLV 206
Cdd:cd06173   86 LLGSLSLWLLLVLAFLLGIASAFFGPARQAL----------LPELVPKEQlvranALNSLATQLARIIGPALGGLLVALL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 207 GSKGVFGL--LTFTFALVSVVGVLFSEPRVHGFSfKQNFTNAMKAMWRTIKcsdvWQPSLYMFITRAlgldikegLFYWF 284
Cdd:cd06173  156 GPGGAFAInaLSFLLSALLLLFIRRPPPAAPGES-SSLLLRDLREGLRYLR----RSPLLRLLLLAL--------ALFAL 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 285 TdskdGPLFAQVIPKQVASIFSKStnmlkaflvcfQETVGFILSIGSIGSILGVLLYNLRLKDHPFRKLFLWTQLLFALS 364
Cdd:cd06173  223 L----GGALTVLLPLLAKEVLGGG-----------AAGYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLA 287
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
57-235 5.98e-03

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 39.07  E-value: 5.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926  57 QGFGYSLGHVATDYYMKDVQKVQPSQYQALSAITRISWIIFKPLFGILTDVlpifGFHRRPYFILAGVIGVVSLLFISLQ 136
Cdd:cd17471    8 TGLAGAFVLPYLSLFLTEELGASPLQIGIFMTLSALSGIVVSQWLGRLSDR----GGDRKPLILLALLAGALGYLLFAFL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 137 SNLHLYLAL--FWMTISSAAM----AIADVTIDActtYNSNKHPSLASDMQSLCSLSYSIGELLGFFmsgiLVHLVGSKG 210
Cdd:cd17471   84 RNYWVLLLVgvVLLSLGAAAFpqlfALAREYADR---SSGRDATLFNSVLRAAFSLAWVIGPPLAFL----LLDVLGFTG 156
                        170       180
                 ....*....|....*....|....*
gi 334187926 211 VFgLLTFTFALVSVVGVLFSEPRVH 235
Cdd:cd17471  157 LF-LLAALLYLVVALLVLFLLPSVK 180
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
102-264 9.53e-03

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 38.36  E-value: 9.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 102 GILTDVLPifgfhRRPYFILAGVI--GVVSLLFISLQSNLHLYLALFWMTISSAAMAIADVTidacttYNSNKHPSLASD 179
Cdd:cd17490   52 GILSDRIG-----KRKLFIIIGLLftVLASLIMILFPSPWGLLIARFLSGIAAATWVSFTVL------YASYFPPDEAAK 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 334187926 180 MQSLCSLSYSIGELLGFFMSGILVHLVGSKGVFgLLTFTFALVSVVGVLF-SEPRVHgfsfKQNFTNAMKAMWRTIKCSD 258
Cdd:cd17490  121 AMGLINLVNNLGQLIAFLIGGLIAEHFGMRAPF-LLAALAGVLGFILSLFiKEERRE----KKPVLTELKELLSVLKDKK 195

                 ....*.
gi 334187926 259 VWQPSL 264
Cdd:cd17490  196 LLFFSL 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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