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Conserved domains on  [gi|341572571|ref|NP_001230052|]
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protein FAM193A [Mus musculus]

Protein Classification

PTZ00449 and FAM193_C domain-containing protein( domain architecture ID 11239807)

PTZ00449 and FAM193_C domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM193_C pfam15914
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 ...
 1462-1517 2.30e-28

FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 amino acids in length. This C-terminal region of these proteins carries the most conserved residues.


:

Pssm-ID: 464940  Cd Length: 57  Bit Score: 108.86  E-value: 2.30e-28
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 341572571  1462 DVFLPKDIDLDSVDMDETEREVEYFKRFCLDSARQNR-QRLSINWSNFSLKKATFAA 1517
Cdd:pfam15914    1 DVFLPKDIDLDDVEMDDTEREVEYFKRFCLDSAPQTRkQKVHVNWKDFSLKKKTTAA 57
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 952-1027 8.85e-04

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 8.85e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 341572571  952 APAAPRNSPTGlaPLPALSPSALSPA--STPHLPNLAAPSFPKTATTAPGFVDTRKSFCPTPVAPPPSTTDGSISAPP 1027
Cdd:PHA03247 2768 APAPPAAPAAG--PPRRLTRPAVASLseSRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP 2843
PRK12704 super family cl36166
phosphodiesterase; Provisional
 1107-1184 2.55e-03

phosphodiesterase; Provisional


The actual alignment was detected with superfamily member PRK12704:

Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 42.07  E-value: 2.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 341572571 1107 EKLRLRLTKRKEEQPKKMEQISEREGVVDHRRVEDLLQFINSS-----EAKPVSSSRAAKRARHKQ----RKLEEKARLE 1177
Cdd:PRK12704  106 EKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISgltaeEAKEILLEKVEEEARHEAavliKEIEEEAKEE 185


                  ....*..
gi 341572571 1178 AEARARE 1184
Cdd:PRK12704  186 ADKKAKE 192
 
Name Accession Description Interval E-value
FAM193_C pfam15914
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 ...
 1462-1517 2.30e-28

FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 amino acids in length. This C-terminal region of these proteins carries the most conserved residues.


Pssm-ID: 464940  Cd Length: 57  Bit Score: 108.86  E-value: 2.30e-28
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 341572571  1462 DVFLPKDIDLDSVDMDETEREVEYFKRFCLDSARQNR-QRLSINWSNFSLKKATFAA 1517
Cdd:pfam15914    1 DVFLPKDIDLDDVEMDDTEREVEYFKRFCLDSAPQTRkQKVHVNWKDFSLKKKTTAA 57
PHA03247 PHA03247
large tegument protein UL36; Provisional
 952-1027 8.85e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 8.85e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 341572571  952 APAAPRNSPTGlaPLPALSPSALSPA--STPHLPNLAAPSFPKTATTAPGFVDTRKSFCPTPVAPPPSTTDGSISAPP 1027
Cdd:PHA03247 2768 APAPPAAPAAG--PPRRLTRPAVASLseSRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP 2843
PRK12704 PRK12704
phosphodiesterase; Provisional
 1107-1184 2.55e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 42.07  E-value: 2.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 341572571 1107 EKLRLRLTKRKEEQPKKMEQISEREGVVDHRRVEDLLQFINSS-----EAKPVSSSRAAKRARHKQ----RKLEEKARLE 1177
Cdd:PRK12704  106 EKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISgltaeEAKEILLEKVEEEARHEAavliKEIEEEAKEE 185


                  ....*..
gi 341572571 1178 AEARARE 1184
Cdd:PRK12704  186 ADKKAKE 192
 
Name Accession Description Interval E-value
FAM193_C pfam15914
FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 ...
 1462-1517 2.30e-28

FAM193 family C-terminal; This domain family is found in eukaryotes, and is approximately 60 amino acids in length. This C-terminal region of these proteins carries the most conserved residues.


Pssm-ID: 464940  Cd Length: 57  Bit Score: 108.86  E-value: 2.30e-28
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 341572571  1462 DVFLPKDIDLDSVDMDETEREVEYFKRFCLDSARQNR-QRLSINWSNFSLKKATFAA 1517
Cdd:pfam15914    1 DVFLPKDIDLDDVEMDDTEREVEYFKRFCLDSAPQTRkQKVHVNWKDFSLKKKTTAA 57
PHA03247 PHA03247
large tegument protein UL36; Provisional
 952-1027 8.85e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 8.85e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 341572571  952 APAAPRNSPTGlaPLPALSPSALSPA--STPHLPNLAAPSFPKTATTAPGFVDTRKSFCPTPVAPPPSTTDGSISAPP 1027
Cdd:PHA03247 2768 APAPPAAPAAG--PPRRLTRPAVASLseSRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP 2843
PRK12704 PRK12704
phosphodiesterase; Provisional
 1107-1184 2.55e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 42.07  E-value: 2.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 341572571 1107 EKLRLRLTKRKEEQPKKMEQISEREGVVDHRRVEDLLQFINSS-----EAKPVSSSRAAKRARHKQ----RKLEEKARLE 1177
Cdd:PRK12704  106 EKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISgltaeEAKEILLEKVEEEARHEAavliKEIEEEAKEE 185


                  ....*..
gi 341572571 1178 AEARARE 1184
Cdd:PRK12704  186 ADKKAKE 192
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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