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Conserved domains on  [gi|392920755|ref|NP_001256324|]
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G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

Protein Classification

G-protein coupled receptor( domain architecture ID 11606548)

G-protein coupled receptor (GPCR) transmits physiological signals from the outside of the cell to the inside by binding to an extracellular agonist, which induces conformational changes that lead to the activation of heterotrimeric G proteins, which then bind to and activate numerous downstream effector proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
34-333 9.32e-36

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


:

Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 133.53  E-value: 9.32e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  34 WMVAIFGTAVCIINILENtFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYkSVVLLRAWFAYML 113
Cdd:cd14978    1 VLYGYVLPVICIFGIIGN-ILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYS-SSFLSYFYAYFLP 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 114 PMITVSHIAMTASSFLMVAASLERYVITCHPTKNR-WLSRNRMWIAAFAIFLGTT-CKFSQLYEMEIEYLPQCMGTMREY 191
Cdd:cd14978   79 YIYPLANTFQTASVWLTVALTVERYIAVCHPLKARtWCTPRRARRVILIIIIFSLlLNLPRFFEYEVVECENCNNNSYYY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 192 QLNLSALARYEIYGYWRVHFRTIVTILIPFFSLAFINIRIVLVL--SKNEFKFLHSTKLSDAKRKSAVRNATRTMVFIVF 269
Cdd:cd14978  159 VIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALrkSKKRRRLLRRRRRLLSRSQRRERRTTIMLIAVVI 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392920755 270 TYLLSNVLNVIIIIWEYIDMDMLTQqfeTFYMFAVDVVSLSTIIFGALRLPIYVICQANLRKEF 333
Cdd:cd14978  239 VFLICNLPAGILNILEAIFGESFLS---PIYQLLGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
34-333 9.32e-36

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 133.53  E-value: 9.32e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  34 WMVAIFGTAVCIINILENtFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYkSVVLLRAWFAYML 113
Cdd:cd14978    1 VLYGYVLPVICIFGIIGN-ILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYS-SSFLSYFYAYFLP 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 114 PMITVSHIAMTASSFLMVAASLERYVITCHPTKNR-WLSRNRMWIAAFAIFLGTT-CKFSQLYEMEIEYLPQCMGTMREY 191
Cdd:cd14978   79 YIYPLANTFQTASVWLTVALTVERYIAVCHPLKARtWCTPRRARRVILIIIIFSLlLNLPRFFEYEVVECENCNNNSYYY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 192 QLNLSALARYEIYGYWRVHFRTIVTILIPFFSLAFINIRIVLVL--SKNEFKFLHSTKLSDAKRKSAVRNATRTMVFIVF 269
Cdd:cd14978  159 VIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALrkSKKRRRLLRRRRRLLSRSQRRERRTTIMLIAVVI 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392920755 270 TYLLSNVLNVIIIIWEYIDMDMLTQqfeTFYMFAVDVVSLSTIIFGALRLPIYVICQANLRKEF 333
Cdd:cd14978  239 VFLICNLPAGILNILEAIFGESFLS---PIYQLLGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
50-302 1.94e-07

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 51.91  E-value: 1.94e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755   50 ENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYK--SVVLLRAWFAYMLpmitvshIAMTASS 127
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDWpfGSALCKIVGALFV-------VNGYASI 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  128 FLMVAASLERYVITCHPTKNRWLSRNR--------MWIAAFAIFLGTTCkFSQLYEMEIEYLPQCMGTMreyqlnLSALA 199
Cdd:pfam00001  74 LLLTAISIDRYLAIVHPLRYKRRRTPRrakvlilvIWVLALLLSLPPLL-FGWTLTVPEGNVTVCFIDF------PEDLS 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  200 RYEIYGYwrvhFRTIVTILIPFFSLAFINIRIVLVLSKnefkflHSTKLSDAKRKSAVRNATRTMVFIVFTYLLS----N 275
Cdd:pfam00001 147 KPVSYTL----LISVLGFLLPLLVILVCYTLIIRTLRK------SASKQKSSERTQRRRKALKTLAVVVVVFILCwlpyH 216
                         250       260
                  ....*....|....*....|....*..
gi 392920755  276 VLNVIIIIWEYIDMDMLTQQFETFYMF 302
Cdd:pfam00001 217 IVNLLDSLALDCELSRLLDKALSVTLW 243
 
Name Accession Description Interval E-value
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
34-333 9.32e-36

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 133.53  E-value: 9.32e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  34 WMVAIFGTAVCIINILENtFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYkSVVLLRAWFAYML 113
Cdd:cd14978    1 VLYGYVLPVICIFGIIGN-ILNLVVLTRKSMRSSTNVYLAALAVSDILVLLSALPLFLLPYIADYS-SSFLSYFYAYFLP 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 114 PMITVSHIAMTASSFLMVAASLERYVITCHPTKNR-WLSRNRMWIAAFAIFLGTT-CKFSQLYEMEIEYLPQCMGTMREY 191
Cdd:cd14978   79 YIYPLANTFQTASVWLTVALTVERYIAVCHPLKARtWCTPRRARRVILIIIIFSLlLNLPRFFEYEVVECENCNNNSYYY 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 192 QLNLSALARYEIYGYWRVHFRTIVTILIPFFSLAFINIRIVLVL--SKNEFKFLHSTKLSDAKRKSAVRNATRTMVFIVF 269
Cdd:cd14978  159 VIPTLLRQNETYLLKYYFWLYAIFVVLLPFILLLILNILLIRALrkSKKRRRLLRRRRRLLSRSQRRERRTTIMLIAVVI 238
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392920755 270 TYLLSNVLNVIIIIWEYIDMDMLTQqfeTFYMFAVDVVSLSTIIFGALRLPIYVICQANLRKEF 333
Cdd:cd14978  239 VFLICNLPAGILNILEAIFGESFLS---PIYQLLGDISNLLVVLNSAVNFIIYCLFSSKFRRTF 299
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
37-304 2.75e-13

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 69.62  E-value: 2.75e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  37 AIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYksvvLLRAWFAYMLPMI 116
Cdd:cd00637    2 AVLYILIFVVGLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRW----WFGDALCKLLGFL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 117 TVshIAMTASSFLMVAASLERYVITCHPTKNRWLSRNR--------MWIAAFAIFLGTTCKFSQlyemeIEYLPQCMGTM 188
Cdd:cd00637   78 QS--VSLLASILTLTAISVDRYLAIVHPLRYRRRFTRRrakllialIWLLSLLLALPPLLGWGV-----YDYGGYCCCCL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 189 REYQLNLSalaryeiYGYWRVHFrtIVTILIPFFSLAFINIRIVLVLSKNEFKF-LHSTKLSDAKRKSAVRNATRTMVFI 267
Cdd:cd00637  151 CWPDLTLS-------KAYTIFLF--VLLFLLPLLVIIVCYVRIFRKLRRHRRRIrSSSSNSSRRRRRRRERKVTKTLLIV 221
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 392920755 268 VFTYLLSNVLNVIIIIWEYIDmDMLTQQFETFYMFAV 304
Cdd:cd00637  222 VVVFLLCWLPYFILLLLDVFG-PDPSPLPRILYFLAL 257
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
41-313 3.40e-10

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 60.70  E-value: 3.40e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  41 TAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYKsvvlLRAWFAYMLPMItvSH 120
Cdd:cd15203    8 GLIIVLGVVGNLLVIYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLPFTLIYTLTKNWP----FGSILCKLVPSL--QG 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 121 IAMTASSFLMVAASLERYVITCHPTKNRWLSRNRMWIAAFAIFLGTTCKFSQLYEMEIEYLPQCMGTMREYQLNLSAlar 200
Cdd:cd15203   82 VSIFVSTLTLTAIAIDRYQLIVYPTRPRMSKRHALLIIALIWILSLLLSLPLAIFQELSDVPIEILPYCGYFCTESW--- 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 201 yeiygyWRVHFRTIVTI-------LIPFFSLAFINIRIVLVLSKNEFKFLHSTKLSDAKRKSAVRNATRT---MVFIVFT 270
Cdd:cd15203  159 ------PSSSSRLIYTIsvlvlqfVIPLLIISFCYFRISLKLRKRVKKKRGKRTLSSRRRRSELRRKRRTnrlLIAMVVV 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 392920755 271 YLLS----NVLNVIIIIWEYIDMDmlTQQFETFYMFAVDVVSLSTII 313
Cdd:cd15203  233 FAVCwlplNLFNLLRDFEPLPQID--GRHFYLIFLICHLIAMSSACV 277
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
50-302 1.94e-07

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 51.91  E-value: 1.94e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755   50 ENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYK--SVVLLRAWFAYMLpmitvshIAMTASS 127
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDWpfGSALCKIVGALFV-------VNGYASI 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  128 FLMVAASLERYVITCHPTKNRWLSRNR--------MWIAAFAIFLGTTCkFSQLYEMEIEYLPQCMGTMreyqlnLSALA 199
Cdd:pfam00001  74 LLLTAISIDRYLAIVHPLRYKRRRTPRrakvlilvIWVLALLLSLPPLL-FGWTLTVPEGNVTVCFIDF------PEDLS 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  200 RYEIYGYwrvhFRTIVTILIPFFSLAFINIRIVLVLSKnefkflHSTKLSDAKRKSAVRNATRTMVFIVFTYLLS----N 275
Cdd:pfam00001 147 KPVSYTL----LISVLGFLLPLLVILVCYTLIIRTLRK------SASKQKSSERTQRRRKALKTLAVVVVVFILCwlpyH 216
                         250       260
                  ....*....|....*....|....*..
gi 392920755  276 VLNVIIIIWEYIDMDMLTQQFETFYMF 302
Cdd:pfam00001 217 IVNLLDSLALDCELSRLLDKALSVTLW 243
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
36-164 1.59e-06

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 49.58  E-value: 1.59e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  36 VAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFV---DYYKSVVLLRAWFAYM 112
Cdd:cd15074    3 IGIYLTVIGILSTLGNGTVLFVLYRRRSKLKPAELLTVNLAVSDLGISVFGYPLAIISAFAhrwLFGDIGCVFYGFCGFL 82
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 392920755 113 LPMITVshiaMTassflMVAASLERYVITCHPTKNRWLSRNRMWIAAFAIFL 164
Cdd:cd15074   83 FGCCSI----NT-----LTAISIYRYLKICHPPYGPKLSRRHVCIVIVAIWL 125
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
35-164 2.89e-05

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 45.66  E-value: 2.89e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  35 MVAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYKSVVLLRAWFAYMlp 114
Cdd:cd14969    2 VLAVYLSLIGVLGVVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFA-- 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 392920755 115 mitVSHIAMTaSSFLMVAASLERYVITCHPTKNRWLSRNRMWIAAFAIFL 164
Cdd:cd14969   80 ---VTFLGLV-SISTLAALAFERYLVIVRPLKAFRLSKRRALILIAFIWL 125
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
37-310 1.03e-04

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 43.79  E-value: 1.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  37 AIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDvwmaLAYIplMSLNLFVDYYksvvLLRAWFAYMLPMI 116
Cdd:cd14982    4 PIVYSLIFILGLLGNILALWVFLRKMKKRSPTTIYMINLALAD----LLFV--LTLPFRIYYY----LNGGWWPFGDFLC 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 117 TVS----HIAMTASSFLMVAASLERYVITCHP-TKNRWLSRNRMWIAAFAIFLGTTCKFSQLYEMEIEYLPQCMGTMrey 191
Cdd:cd14982   74 RLTgllfYINMYGSILFLTCISVDRYLAVVHPlKSRRLRRKRYAVGVCAGVWILVLVASVPLLLLRSTIAKENNSTT--- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 192 qlNLSALARYEIYGYWRVHFRTIVTILIPFFSLAFINIRIVLVLSKNEFKFLHSTKlsdaKRKSAVRNATRTMVFIVFtY 271
Cdd:cd14982  151 --CFEFLSEWLASAAPIVLIALVVGFLIPLLIILVCYSLIIRALRRRSKQSQKSVR----KRKALRMILIVLAVFLVC-F 223
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|.
gi 392920755 272 LLSNVLNVIIIIWEY--IDMDMLTQQFETFYMFAVDVVSLS 310
Cdd:cd14982  224 LPYHVTRILYLLVRLsfIADCSARNSLYKAYRITLCLASLN 264
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
34-164 1.32e-04

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 43.74  E-value: 1.32e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  34 WMVAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPL-MSLNLFVDYYKSVVLLRAwFAYM 112
Cdd:cd14993    1 IVLIVLYVVVFLLALVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLtLLENVYRPWVFGEVLCKA-VPYL 79
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 113 LPmitvshIAMTASSFLMVAASLERYVITCHPTKNRWLSRNR--------MWIAAFAIFL 164
Cdd:cd14993   80 QG------VSVSASVLTLVAISIDRYLAICYPLKARRVSTKRrariiivaIWVIAIIIML 133
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
34-174 1.41e-04

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 43.38  E-value: 1.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  34 WMVAIFGTaVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYI-PLMSLNLFVDYYKSVVLLRAW-FAY 111
Cdd:cd15196    2 VEIAVLAT-ILVLALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADLLVALFNVlPQLIWDITYRFYGGDLLCRLVkYLQ 80
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392920755 112 MLPMItvshiamtASSFLMVAASLERYVITCHPTKNRWLSRNRM-WIAAFAIFLGTTCKFSQLY 174
Cdd:cd15196   81 VVGMY--------ASSYVLVATAIDRYIAICHPLSSHRWTSRRVhLMVAIAWVLSLLLSIPQLF 136
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
41-333 1.74e-04

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 43.11  E-value: 1.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  41 TAVCII----NILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFvdYYKSVVL------LRAWFA 110
Cdd:cd14979    4 TAIYVAifvvGIVGNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFW--WQYPWAFgdggckLYYFLF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 111 YMLPMITVSHIamtassflmVAASLERYVITCHPTKNRWLSRNR--------MWIAAF--AIFLGTTckfsqlyeMEIEY 180
Cdd:cd14979   82 EACTYATVLTI---------VALSVERYVAICHPLKAKTLVTKRrvkrfilaIWLVSIlcAIPILFL--------MGIQY 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 181 LPQCMGTMREYQLNLSALARYEIYGYWrVHFRTIVTILIPFFSLAFINIRI-----VLVLSKNEFKFLHSTKLSDAKRKS 255
Cdd:cd14979  145 LNGPLPGPVPDSAVCTLVVDRSTFKYV-FQVSTFIFFVLPMFVISILYFRIgvklrSMRNIKKGTRAQGTRNVELSLSQQ 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 256 AVRNATRTMVFIVFTYLLSNVLN-VIIIIWEYIDMD--MLTQQFETFYMFAVDVVSLSTIIFgalrlPI-YVICQANLRK 331
Cdd:cd14979  224 ARRQVVKMLGAVVIAFFVCWLPFhAQRLMFSYASKEdtFLFDFYQYLYPISGILFYLSSAIN-----PIlYNLMSSRFRV 298

                 ..
gi 392920755 332 EF 333
Cdd:cd14979  299 AF 300
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
36-273 3.89e-04

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 41.78  E-value: 3.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  36 VAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLN-LFVDYYKSVVLLRAWfaymlp 114
Cdd:cd14967    2 LAVFLSLIILVTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYtLLGYWPFGPVLCRFW------ 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 115 mITVSHIAMTASSFLMVAASLERYVITCHPTKNRWLSRNRM--------WIAAFAIflgttckfsqlyemeieYLPQCMG 186
Cdd:cd14967   76 -IALDVLCCTASILNLCAISLDRYLAITRPLRYRQLMTKKRalimiaavWVYSLLI-----------------SLPPLVG 137
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 187 TMREYQLNLSALARYEIYGYWRVHFRTIVTILIPFFSLAFINIRIVLVLSKnEFKflhstklsdakrksavrnATRTMVF 266
Cdd:cd14967  138 WRDETQPSVVDCECEFTPNKIYVLVSSVISFFIPLLIMIVLYARIFRVARR-ELK------------------AAKTLAI 198

                 ....*..
gi 392920755 267 IVFTYLL 273
Cdd:cd14967  199 IVGAFLL 205
7tmA_QRFPR cd15205
pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane ...
38-181 6.28e-03

pyroglutamylated RFamide peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that belongs to a family of neuropeptides containing an Arg-Phe-NH2 (RFamide) motif at its C-terminus. 26Rfa/QRFP exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103.


Pssm-ID: 320333 [Multi-domain]  Cd Length: 298  Bit Score: 38.22  E-value: 6.28e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  38 IFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPL-MSLNLFVDYyksvvLLRAWFAYMLPMI 116
Cdd:cd15205    5 ITYVLIFVLALFGNSLVIYVVTRKRAMRTATNIFICSLALSDLLITFFCIPFtLLQNISSNW-----LGGAFMCKMVPFV 79
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 392920755 117 TVshIAMTASSFLMVAASLERYVITCHPTKNRWLSRNR--------MWIAafAIFLGTTCKFSQLYEMEIEYL 181
Cdd:cd15205   80 QS--TAVVTSILTMTCIAVERHQGIVHPLKMKWQYTNRraftmlglVWIV--SVIVGSPMLFVQQLEVKYDFL 148
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
36-162 7.44e-03

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 38.03  E-value: 7.44e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  36 VAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMslnlfvdyyksvvlLRAWFAYMLPM 115
Cdd:cd15001    2 VIIVYVITFVLGLIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLK--------------TAEYFSPTWSL 67
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 392920755 116 IT--------VSHIAMTASSFLMVAASLERYVITCHPTKNRWL-SRNRM-------WIAAFAI 162
Cdd:cd15001   68 GAflckavayLQLLSFICSVLTLTAISIERYYVILHPMKAKSFcTIGRArkvalliWILSAIL 130
7tmA_NOFQ_opioid_R cd15092
nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G ...
36-146 7.78e-03

nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The nociceptin (NOP) receptor binds nociceptin or orphanin FQ, a 17 amino acid endogenous neuropeptide. The NOP receptor is involved in the modulation of various brain activities including instinctive and emotional behaviors. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320220 [Multi-domain]  Cd Length: 279  Bit Score: 37.92  E-value: 7.78e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  36 VAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVwMALAYIPLMSLNLFVDYYKsvvllrawFAYMLPM 115
Cdd:cd15092    3 IVVVYLIVCVVGLVGNCLVMYVILRHTKMKTATNIYIFNLALADT-LVLLTLPFQGTDIFLGFWP--------FGNALCK 73
                         90       100       110
                 ....*....|....*....|....*....|...
gi 392920755 116 ITVS--HIAMTASSFLMVAASLERYVITCHPTK 146
Cdd:cd15092   74 TVIAidYYNMFTSTFTLTAMSVDRYVAICHPIK 106
7tmA_TRH-R cd14995
thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G ...
34-163 7.83e-03

thyrotropin-releasing hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; TRH-R is a member of the class A rhodopsin-like G protein-coupled receptors, which binds the tripeptide thyrotropin releasing hormone. The TRH-R activates phosphoinositide metabolism through a pertussis-toxin-insensitive G-protein, the G(q)/G(11) class. TRH stimulates the synthesis and release of thyroid-stimulating hormone in the anterior pituitary. TRH is produced in many other tissues, especially within the nervous system, where it appears to act as a neurotransmitter/neuromodulator. It also stimulates the synthesis and release of prolactin. In the CNS, TRH stimulates a number of behavioral and pharmacological actions, including increased turnover of catecholamines in the nucleus accumbens. There are two thyrotropin-releasing hormone receptors in some mammals, thyrotropin-releasing hormone receptor 1 (TRH1) which has been found in a number of species including rat, mouse, and human and thyrotropin-releasing hormone receptor 2 (TRH2) which has, only been found in rodents. These TRH receptors are found in high levels in the anterior pituitary, and are also found in the retina and in certain areas of the brain.


Pssm-ID: 320126 [Multi-domain]  Cd Length: 269  Bit Score: 38.13  E-value: 7.83e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  34 WMVAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFD-VWMALAYIPLMSLNLFVdyyksvvlLRAWF--- 109
Cdd:cd14995    1 VVATFLVLLICGVGIVGNIMVVLVVLRTRHMRTPTNCYLVSLAVADlMVLVAAGLPNEIESLLG--------PDSWIygy 72
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 392920755 110 AYMLPMITVSHIAMTASSFLMVAASLERYVITCHPTKNRWL---SRNRMWIAAFAIF 163
Cdd:cd14995   73 AGCLLITYLQYLGINASSLSITAFTIERYIAICHPMKAQFIctvSRAKKIICFVWIF 129
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
38-164 9.10e-03

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 37.66  E-value: 9.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  38 IFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVwMALAYIPLMSLNLFVDYYK-SVVLLRAwfaymlpMI 116
Cdd:cd14970    5 AVYSVVCVVGLTGNSLVIYVILRYSKMKTVTNIYILNLAVADE-LFLLGLPFLATSYLLGYWPfGEVMCKI-------VL 76
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 392920755 117 TVSHIAMTASSFLMVAASLERYVITCHPTKNRWLSRNRM--------WIAAFAIFL 164
Cdd:cd14970   77 SVDAYNMFTSIFCLTVMSVDRYLAVVHPVKSLRFRTPRKaklvslcvWALSLVLGL 132
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
41-287 9.14e-03

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 37.72  E-value: 9.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  41 TAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYIPLMSLNLFVDYYksvvllraWF--AYMLPMITV 118
Cdd:cd15392    8 STIFVLAVGGNGLVCYIVVSYPRMRTVTNYFIVNLALSDILMAVFCVPFSFIALLILQY--------WPfgEFMCPVVNY 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 119 SH-IAMTASSFLMVAASLERYVITCHPTKNRwLSRNRMWIAAFAIFLgttckFSQLYEmeieyLPQCMGTMREYQLNLSA 197
Cdd:cd15392   80 LQaVSVFVSAFTLVAISIDRYVAIMWPLRPR-MTKRQALLLIAVIWI-----FALATA-----LPIAITSRLFEDSNASC 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 198 LARYEIYGYWRVHFRTIVTI-------LIPFFSLAFINIRIVLVLsknefkFLHST-----KLSDAKRKSAVRNATRTM- 264
Cdd:cd15392  149 GQYICTESWPSDTNRYIYSLvlmilqyFVPLAVLVFTYTRIGIVV------WAKRTpgeaeNNRDQRMAESKRKLVKMMi 222
                        250       260
                 ....*....|....*....|....*.
gi 392920755 265 -VFIVFT--YLLSNVLNVIIIIWEYI 287
Cdd:cd15392  223 tVVAIFAlcWLPLNILNLVGDHDESI 248
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
35-286 9.82e-03

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 37.81  E-value: 9.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755  35 MVAIFGTAVCIINILENTFLSFMLFKKKSYRSSHMLYLALLAFFDVWMALAYI-PLMSLNLFVDYYKSVVLLRAWFAyml 113
Cdd:cd15012    1 IFIILYTLVFCCCFFGNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVlQNLSIYLIPSWPFGEVLCRMYQF--- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 114 pmitVSHIAMTASSFLMVAASLERYVITCHPTKNR-WLSRNRMWIAAFAIFL--GTTCKFSQLYEMEIEYL-PQCMGTMR 189
Cdd:cd15012   78 ----VHSLSYTASIGILVVISVERYIAILHPLRCKqLLTAARLRVTIVTVWLtsAVYNTPYFVFSQTVEILvTQDGQEEE 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392920755 190 eyqLNLSALARYEIYGYWRVHFrtIVTILIPFFSLAFINIRIVLVLSKnefkflhstklsdAKRKSAVRNATRTMVFIVF 269
Cdd:cd15012  154 ---ICVLDREMFNSKLYDTINF--IVWYLIPLLIMTVLYSKISIVLWK-------------SSSIEARRKVVRLLVAVVV 215
                        250
                 ....*....|....*..
gi 392920755 270 TYLLSNVLNVIIIIWEY 286
Cdd:cd15012  216 SFALCNLPYHARKMWQY 232
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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