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Conserved domains on  [gi|392921031|ref|NP_001256404|]
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MFS domain-containing protein [Caenorhabditis elegans]

Protein Classification

major facilitator superfamily domain-containing protein 7( domain architecture ID 13024452)

major facilitator superfamily domain-containing protein 7 belongs to the major facilitator superfamily (MFS) of transporters that facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MFSD7 cd17399
Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily ...
35-453 2.68e-150

Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily domain-containing protein 7 (MFSD7) is also called myosin light polypeptide 5 regulatory protein (MYL5). It's function is unknown. It is encoded by the a SLC49A3 gene and is a member of the Solute carrier 49 (SLC49) family, which also includes feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1), FLVCR2 (SLC49A2), as well as disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. MFSD7 belongs to the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340957  Cd Length: 419  Bit Score: 435.16  E-value: 2.68e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYrgrpaNGSIDVSLVTNQIFQFVAVFTGFGGMYITDNKGIKTAGLLGT 114
Cdd:cd17399    2 RWFVLLVVCLLNCSNAMIWISFAPVADYTAEYY-----NVSLDAVNWLSLIYMIVSIPVGFVAMWLLDTLGLRTAIILGA 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 115 TLNVIGASIRMIASIPFIkSHFVRECLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIV 194
Cdd:cd17399   77 WLNFIGAVIRVISSLPFV-DPSFRFPVLMTGQTLAAFAQPFILFLPTKLAALWFPDNQRAIANMLASMSNPLGVLLANLL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 195 PSILFGHNKTidsnswmFFTFTLGMECLALFPFVLALFVRTKLPPTPPSASSAAHQNNiGFFKSILQCIFNAQFFIQMTL 274
Cdd:cd17399  156 SPLIVKSSED-------IFLLLSIYTIPALIAVVLATFGVRSSVPPTPPSASAAHESE-PFFVGLKQLFKNKQYLILMLC 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 275 FAFAFSLLWSLMIFLDGPLKDQGY--EMAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEiirVCTVGFSCSVITLRMFLN 352
Cdd:cd17399  228 FGGGIGLFNALSTLLEQILCPSGYsnNFAGICGALMIGVGLIGAFVAGLIVDKTKKFIE---VTKVCFCLAVIFLVAFLV 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 353 QPRTgLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQNYTEKLH-------- 424
Cdd:cd17399  305 VSRF-PNQSVLLAVLCGLFGFFGFAIYPVGLELAVECTYPVAEATSTGLIFMSGQIQGIILVFIMQALATPLsvydlpiq 383
                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 392921031 425 -------LFYAQSWKFALDVTCGLSIVSVILSLFFL 453
Cdd:cd17399  384 cassasgNITPLDWTVPLLVMAGLAAVLAIIFVVFF 419
 
Name Accession Description Interval E-value
MFS_MFSD7 cd17399
Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily ...
35-453 2.68e-150

Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily domain-containing protein 7 (MFSD7) is also called myosin light polypeptide 5 regulatory protein (MYL5). It's function is unknown. It is encoded by the a SLC49A3 gene and is a member of the Solute carrier 49 (SLC49) family, which also includes feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1), FLVCR2 (SLC49A2), as well as disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. MFSD7 belongs to the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340957  Cd Length: 419  Bit Score: 435.16  E-value: 2.68e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYrgrpaNGSIDVSLVTNQIFQFVAVFTGFGGMYITDNKGIKTAGLLGT 114
Cdd:cd17399    2 RWFVLLVVCLLNCSNAMIWISFAPVADYTAEYY-----NVSLDAVNWLSLIYMIVSIPVGFVAMWLLDTLGLRTAIILGA 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 115 TLNVIGASIRMIASIPFIkSHFVRECLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIV 194
Cdd:cd17399   77 WLNFIGAVIRVISSLPFV-DPSFRFPVLMTGQTLAAFAQPFILFLPTKLAALWFPDNQRAIANMLASMSNPLGVLLANLL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 195 PSILFGHNKTidsnswmFFTFTLGMECLALFPFVLALFVRTKLPPTPPSASSAAHQNNiGFFKSILQCIFNAQFFIQMTL 274
Cdd:cd17399  156 SPLIVKSSED-------IFLLLSIYTIPALIAVVLATFGVRSSVPPTPPSASAAHESE-PFFVGLKQLFKNKQYLILMLC 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 275 FAFAFSLLWSLMIFLDGPLKDQGY--EMAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEiirVCTVGFSCSVITLRMFLN 352
Cdd:cd17399  228 FGGGIGLFNALSTLLEQILCPSGYsnNFAGICGALMIGVGLIGAFVAGLIVDKTKKFIE---VTKVCFCLAVIFLVAFLV 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 353 QPRTgLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQNYTEKLH-------- 424
Cdd:cd17399  305 VSRF-PNQSVLLAVLCGLFGFFGFAIYPVGLELAVECTYPVAEATSTGLIFMSGQIQGIILVFIMQALATPLsvydlpiq 383
                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 392921031 425 -------LFYAQSWKFALDVTCGLSIVSVILSLFFL 453
Cdd:cd17399  384 cassasgNITPLDWTVPLLVMAGLAAVLAIIFVVFF 419
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
35-458 1.93e-08

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 56.03  E-value: 1.93e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYRGRPAngsiDVSLVTNqIFQFVAVFTGFGGMYITDNKGIKTAGLLGT 114
Cdd:COG2271    8 RWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAA----QLGLLAS-AFFLGYALGQIPAGLLADRFGRRRVLAIGL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 115 TLNVIGASIRMIASIPFikshfvrecLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIV 194
Cdd:COG2271   83 LLWGLATLLFGFATSFW---------QLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPL 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 195 PSILFGHnktiDSNSWMFFTFTLGMECLALFPFVLALFvrtklpptppsassaahqnnigffksilqcifnAQFFIQMTL 274
Cdd:COG2271  154 LGWLLAA----FGWRAAFLILGLPGLLLALLRFWLLAL---------------------------------AYFLVYFAL 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 275 FAFAFsllWSLMIFLDGplKDQGYEMAGYPTAVCAIVGTLTSLLAGHIADKTrkFKEIIRVCTVGFSCSVITLRMFLNQP 354
Cdd:COG2271  197 YGFLT---WLPTYLVEV--RGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRL--GRRRKLVLAIGLLLAALALLLLALLP 269
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 355 rtglfDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQNYteklhLFYAQSWKFA 434
Cdd:COG2271  270 -----SPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGY-----LLDATGYQAA 339
                        410       420
                 ....*....|....*....|....
gi 392921031 435 LDVTCGLSIVSVILSLFFLRPRYR 458
Cdd:COG2271  340 FLLLAALALLAALLALLLLRETRK 363
MFS_1 pfam07690
Major Facilitator Superfamily;
85-414 8.75e-08

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 53.96  E-value: 8.75e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031   85 IFQFVAVFTGFGGMYITDNKGIKTAGLLGTTLNVIGASIRMIASIPFikshfvrecLLHAGSFIAASAQAFFLVLPSKIA 164
Cdd:pfam07690  40 LFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLW---------LLLVLRVLQGLGAGALFPAALALI 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  165 ECWFPGDQRAIANVLSFVANPAGVALGTIVPSILFGHNktidSNSWMFFTFTLgmecLALFPFVLALFVRTKLPPTPPSA 244
Cdd:pfam07690 111 ADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF----GWRAAFLILAI----LSLLAAVLLLLPRPPPESKRPKP 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  245 SSAAHQNNIGFFKSilqcIFNAQFFIQMTLFAFAFSLLWSLMIFLDGPLKDQGYE--MAGYPTAVCAIVGTLTSLLAGHI 322
Cdd:pfam07690 183 AEEARLSLIVAWKA----LLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSalLAGLLLGLGGLLGAIGRLLLGRL 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  323 ADKTRKFKEIIRVCTVGFSCSVITLRMFLnqprtgLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVL 402
Cdd:pfam07690 259 SDRLGRRRRLLLALLLLILAALGLLLLSL------TLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLY 332
                         330
                  ....*....|..
gi 392921031  403 VIFGSLFMFIIP 414
Cdd:pfam07690 333 NTAGSLGGALGP 344
 
Name Accession Description Interval E-value
MFS_MFSD7 cd17399
Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily ...
35-453 2.68e-150

Major facilitator superfamily domain-containing protein 7; Major facilitator superfamily domain-containing protein 7 (MFSD7) is also called myosin light polypeptide 5 regulatory protein (MYL5). It's function is unknown. It is encoded by the a SLC49A3 gene and is a member of the Solute carrier 49 (SLC49) family, which also includes feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1), FLVCR2 (SLC49A2), as well as disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. MFSD7 belongs to the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340957  Cd Length: 419  Bit Score: 435.16  E-value: 2.68e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYrgrpaNGSIDVSLVTNQIFQFVAVFTGFGGMYITDNKGIKTAGLLGT 114
Cdd:cd17399    2 RWFVLLVVCLLNCSNAMIWISFAPVADYTAEYY-----NVSLDAVNWLSLIYMIVSIPVGFVAMWLLDTLGLRTAIILGA 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 115 TLNVIGASIRMIASIPFIkSHFVRECLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIV 194
Cdd:cd17399   77 WLNFIGAVIRVISSLPFV-DPSFRFPVLMTGQTLAAFAQPFILFLPTKLAALWFPDNQRAIANMLASMSNPLGVLLANLL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 195 PSILFGHNKTidsnswmFFTFTLGMECLALFPFVLALFVRTKLPPTPPSASSAAHQNNiGFFKSILQCIFNAQFFIQMTL 274
Cdd:cd17399  156 SPLIVKSSED-------IFLLLSIYTIPALIAVVLATFGVRSSVPPTPPSASAAHESE-PFFVGLKQLFKNKQYLILMLC 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 275 FAFAFSLLWSLMIFLDGPLKDQGY--EMAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEiirVCTVGFSCSVITLRMFLN 352
Cdd:cd17399  228 FGGGIGLFNALSTLLEQILCPSGYsnNFAGICGALMIGVGLIGAFVAGLIVDKTKKFIE---VTKVCFCLAVIFLVAFLV 304
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 353 QPRTgLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQNYTEKLH-------- 424
Cdd:cd17399  305 VSRF-PNQSVLLAVLCGLFGFFGFAIYPVGLELAVECTYPVAEATSTGLIFMSGQIQGIILVFIMQALATPLsvydlpiq 383
                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 392921031 425 -------LFYAQSWKFALDVTCGLSIVSVILSLFFL 453
Cdd:cd17399  384 cassasgNITPLDWTVPLLVMAGLAAVLAIIFVVFF 419
MFS_SLC49 cd17334
Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily of transporters; The ...
35-452 1.21e-51

Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily of transporters; The Solute carrier 49 (SLC49) family is composed of four members: feline leukemia virus subgroup C receptor 1 (FLVCR1, SLC49A1); FLVCR2 (SLC49A2); major facilitator superfamily domain-containing protein 7 (MFSD7, SLC49A3); and disrupted in renal carcinoma protein 2 (DIRC2, SLC49A4). FLVCR1 and FLVCR2 are heme transporters. In addition, FLVCR2 also functions as a transporter for a calcium-chelator complex that is important for growth and calcium metabolism. The function of MFSD7 is unknown. DIRC2 is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. The SLC49 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340892 [Multi-domain]  Cd Length: 407  Bit Score: 180.29  E-value: 1.21e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYRGrpaNGSIDVSLVTnqIFQFVAVFTGFGGMYITDNKGIKTAGLLGT 114
Cdd:cd17334    2 RWVVLLLFSLLSFSNAMQWITFSPIADEARTFFDL---SASQINWLSL--VYPIVYVPGVFAFCWLLDKVGLRIGVLIGA 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 115 TLNVIGASIRMIASIPFIKSHfvrecLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIV 194
Cdd:cd17334   77 ALNALGSVLKCIPLGQQPKFA-----LLVLGQVLNALAQVLVLSLPPLIAAVWFPPKERTTATAIASLANFLGCAIGFLL 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 195 PSILFGHNKTIDSNSWMFFTFTLGMECLaLFPFVLALFVRTklPPTPPSASSAAHQNNIGFFKSILQCIFNAQFFIQMTL 274
Cdd:cd17334  152 PPVVVPPPKGTKKEFGAVFYGEFGFACL-LLALVLALFPPK--PKYPPSAASARQQNSEHVILELQKSISELLRNEPFVL 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 275 FAFAFSLL----WSLMIFLDGPLKDQGYE--MAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEIIRVCTVGFScSVITLR 348
Cdd:cd17334  229 LAVAFSIMmgvfAGFSSVLAQILLPFGVSqtSAGWLGFFGIVAGMVGGLLLGLFVDRTRMFKLIGLIILALGT-VVCTFF 307
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 349 MFLNQPRTGLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQNYTEKLHLFYA 428
Cdd:cd17334  308 MLLVDRYGLPYVTLAFYLLCGLLGFFQNSMVPIMFELAVELTYPVPESVSTGVLTALANLFSFLLMLVFSELLGPTPTES 387
                        410       420
                 ....*....|....*....|....
gi 392921031 429 QswkfALDVTCGLSIVSVILSLFF 452
Cdd:cd17334  388 K----YLLWFILCTVGSCLGALFF 407
MFS_FLVCR_like cd17398
Feline leukemia virus subgroup C receptor subfamily of the Major Facilitator Superfamily of ...
35-451 7.80e-47

Feline leukemia virus subgroup C receptor subfamily of the Major Facilitator Superfamily of transporters; The Feline leukemia virus subgroup C receptor (FLVCR) subfamily is conserved in metazoans and is composed of two vertebrate members, FLVCR1 and FLVCR2. FLVCR1 is a heme transporter and it has two isoforms: 1 (or FLVCR1a), which exports cytoplasmic heme as well as coproporphyrin and protoporphyrin IX; and 2 (FLVCR1b), which promotes heme efflux from the mitochondrion to the cytoplasm. FLVCR2 functions as a heme importer as well as a transporter for a calcium-chelator complex that is important for growth and calcium metabolism. The FLVCR subfamily belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340956 [Multi-domain]  Cd Length: 406  Bit Score: 167.42  E-value: 7.80e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYrgrpangsiDVSLV----TNQIFQFVAVFTGFGGMYITDNKGIKTAG 110
Cdd:cd17398    2 RWIMLFLFCLYSMSNAFQWIQYAIISNIIVDYY---------GVSDTavdwTSMIYMLTYIPLIFPATWLLEKYGLRVTV 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 111 LLGTTLNVIGASIRMIASIPfikshfVRECLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVAL 190
Cdd:cd17398   73 LLGSFLNCLGAWLKLFSSSP------DLFWVAMAGQTICALAQVFILGIPPRLAAVWFGPDEVSTATAIGVFGNQLGVAL 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 191 GTIVPSILFGHNKTIDSNSWMFFTFTLGMECLALFPFVLALFVRTKLPPTPPSASSAAHQN----NIGFFKSILQCIFNA 266
Cdd:cd17398  147 GFVLPPLLVPNSENKDEIGKGLSILFYGVAGICTALFILVIIFFKEKPPIPPSRAQAAAQElrseDQSYLGSLKRLFKNK 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 267 QFFIQMTLFA------FAFSLLWSLMIFLDGPLKDqgyEMAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEIirvcTVGF 340
Cdd:cd17398  227 GFLLLLITYGintgvyYAISTLLNQMVLEYFPNEE---VNAGWIGLTLVIAGLVGSVVAGIWLDKTKKYKET----TIIV 299
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 341 S-CSVITLRMFlnqprTGLFDS---IIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVifGSLFMFIIPFA 416
Cdd:cd17398  300 YiLSFIGMVAF-----TFTLDLgsiWVVFLTAGALGFFMTGYLPVGFEFAAELTYPEPEGTSSGLLN--ASAQIFGIIFT 372
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 392921031 417 QNYTEKLHLFYAqswKFALDVTCGLSIVSVILSLF 451
Cdd:cd17398  373 LVMGALLDKVGA---LASNIVLSVALLLGTILTAF 404
MFS_FLVCR2 cd17456
Feline leukemia virus subgroup C receptor-related protein 2 of the Major Facilitator ...
35-417 3.11e-28

Feline leukemia virus subgroup C receptor-related protein 2 of the Major Facilitator Superfamily of transporters; Feline leukemia virus subgroup C receptor-related protein 2 (FLVCR2) is also called calcium-chelate transporter (CCT). It functions as a heme importer as well as a transporter for a calcium-chelator complex that is important for growth and calcium metabolism. Mutations in the FLVCR2 gene cause Proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome (PVHH), also known as Fowler syndrome, a rare autosomal recessive disorder characterized by glomerular vasculopathy in the central nervous system, severe hydrocephaly, hypokinesia and arthrogryphosis. FLVCR2 belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341014  Cd Length: 406  Bit Score: 116.03  E-value: 3.11e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYrgrpangSIDVSLV--TNQIFQFVAVFTGFGGMYITDNKGIKTAGLL 112
Cdd:cd17456    2 RWVIVLLFSSYSLCNAFQWIQYGIINNIFMHFY-------GVSSFAIdwLSMSYMLTYIPLIFPVAWLLDKRGLRVIALV 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 113 GTTLNVIGASIRMIASIPfiksHFVRECLLhaGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGT 192
Cdd:cd17456   75 GSALNCLGAWIKTGSARP----DLFPVTVL--GQLVCSVAQVFILGMPSRIASVWFGSSEVSTACSIGVFGNQLGVAIGF 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 193 IVPSILFGHNKTIDSNSWMFFTFTLGMECLALFPFVLALFVRTKLPPTPPSASSAAHQN----NIGFFKSILQCIFNAQF 268
Cdd:cd17456  149 LLPPVLVPNIDDLDELAYHISIMFYGTAAVATLLFILVIIVFQEKPKIPPSQAQAAIQSipsqDYSYLQSILRLLKNVNF 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 269 FIQMTLFA------FAFSLLWSLMIFLDGPlkdqGYEM-AGYPTAVCAIVGTLTSLLAGHIADKTRKFKEIIRVCTVGFS 341
Cdd:cd17456  229 ILLVVSYGlntgcfYALSTLLNRMVIFHYP----GEEVnAGRIGLTIVVAGMVGALISGIWLDRTKTYKQTTLAVYIMSL 304
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 392921031 342 CSVITLRMFLNqprtgLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQ 417
Cdd:cd17456  305 VGMVVYTFTLN-----LGHLWVVFITAGTLGFFMTGYLPLGFEFAAELTYPESEGTSSGLLNVSAQVFGIIFTISQ 375
MFS_FLVCR1 cd17455
Feline leukemia virus subgroup C receptor-related protein 1 of the Major Facilitator ...
35-417 2.58e-27

Feline leukemia virus subgroup C receptor-related protein 1 of the Major Facilitator Superfamily of transporters; Feline leukemia virus subgroup C receptor-related protein 1 (FLVCR1) is also called feline leukemia virus subgroup C receptor (FLVCR). FLVCR1 is a heme transporter and it has two isoforms: 1 (or FLVCR1a), which exports cytoplasmic heme as well as coproporphyrin and protoporphyrin IX; and 2 (FLVCR1b), which promotes heme efflux from the mitochondrion to the cytoplasm. Mutations in the FLVCR1 gene have been linked to vision impairment, posterior column ataxia, and sensory neurodegeneration with loss of pain perception. FLVCR1 belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341013  Cd Length: 407  Bit Score: 113.39  E-value: 2.58e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYRgrPANGSID-VSLVtnqiFQFVAVFTGFGGMYITDNKGIKTAGLLG 113
Cdd:cd17455    2 RFAVLAVFSLYSLVNAFQWIQYSIITNIFTEFYG--VSSGAIDwLSVV----YMVAYVPLIFPATWLLDLKGLRVTALLG 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 114 TTLNVIGASIRMIASIPFIKShfvrecLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTI 193
Cdd:cd17455   76 AGLNCLGAWVKCASVRPDLFG------VTMLAQVLCSVAQVFILGLPSRIASVWFGPREVSTACAVAVLGNQLGTAIGFL 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 194 VPSIL----------FGHNKTIdsnswMFFtftlGMECLALFPFVLALFVRTKLPPTPPSASSAAHQN----NIGFFKSI 259
Cdd:cd17455  150 LPPVLvpntvddidlMGHNISI-----MFY----GTAAVSTLLFILTIIVFKEKPPLPPSQAQAVLQGipseDYSYKQSI 220
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 260 LQCIFNAQFFIQMTLFAFAFSLLWSLMIFLDGPLKD--QGYEM-AGYPTAVCAIVGTLTSLLAGHIADKTRKFKEIIRVC 336
Cdd:cd17455  221 INLFKNVPFVLLLISYGIMTGTFYSVSTLLNQMIIThyEGEEVnAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIV 300
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 337 TVGFSCSVITLRMFLNqprtgLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFA 416
Cdd:cd17455  301 YILSFIGMVVFTFTLD-----LGYLIVVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGIIFTLI 375

                 .
gi 392921031 417 Q 417
Cdd:cd17455  376 Q 376
MFS_DIRC2 cd17397
Disrupted in renal carcinoma protein 2 of the Major Facilitator Superfamily of transporters; ...
35-412 2.18e-25

Disrupted in renal carcinoma protein 2 of the Major Facilitator Superfamily of transporters; Disrupted in renal carcinoma protein 2 or disrupted in renal cancer protein 2 (DIRC2), encoded by the SLC49A4 gene, was initially identified as a breakpoint-spanning gene in a chromosomal translocation associated with the development of renal cancer. It is an electrogenic lysosomal metabolite transporter that is regulated by limited proteolytic processing by cathepsin L. DIRC2 belongs to the Solute carrier 49 (SLC49) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340955 [Multi-domain]  Cd Length: 381  Bit Score: 107.38  E-value: 2.18e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYrgrpANGSIDVSLVTNQIfQFVAVFTGFGGMYITDNKGIKTAGLLGT 114
Cdd:cd17397    2 RWYILLVFSLLAFTQGAVWNTWGPIADSAKPAF----GWSDSDIALLANWG-PIGFVPTFFFMAWLMDVKGLRIAVLSSA 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 115 TLNVIGASIRMIASIPFIKSHfvrecLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIV 194
Cdd:cd17397   77 FLVAAGTGLRCIPVPNHLATW-----LIHIGQFLNGLAGPVAMAAAPFLSATWFPPNQRATATAIASIFNYLGGAASFLI 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 195 -PSILfghnktidsnswMFFTFTLgmeCLALFPFVLALFvrTKLPPTPPSASSAAHQnnIGFFKSILQCIFNAQFFIQMT 273
Cdd:cd17397  152 gPLVL------------MYLEFGW---SALIFLAMLIYF--PSKPPTPPSVSASTQR--LSYKSGILSLLKNKRFWLIAL 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 274 LFAFAFSLL--WSLMifLDGPLKDQGYEM--AGYPTAVCAIVGTLTSLLAGHIADK-TRKFKEIIRVCTVGfsCSVITLR 348
Cdd:cd17397  213 AYGIPTGVYagWSGV--LDVNLTPFGVSQveAGWIGFYSTVAGCVGGIIVGRFADRfGGRMKLILLLLFSG--ATGSFLW 288
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 392921031 349 MFLNQPRTGLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFI 412
Cdd:cd17397  289 FTLICLKLLPFSTVSLYTSCILLGVFLNGSVPLFYELAVEAAYPVPEGITSGVLTFLNNVFGLV 352
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
43-450 2.20e-10

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 62.06  E-value: 2.20e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  43 CFLALSNAMQWISFSSLSDEVQIYYrgrpaNGSIDVSLVTNQIFQFVAVFTGFGGMYITDNKGIKTAGLLGTTLNVIGAS 122
Cdd:cd06174    2 LLGFFLTGLARGLISPLLPALLQSF-----GLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGAL 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 123 IRMIASIPFikshfvrecLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIVPSILFGHN 202
Cdd:cd06174   77 LFAFAPSFW---------LLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSL 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 203 KTidSNSWMFFTFTLGmecLALFPFVLALFVRTKLPPTPPSASSAAHQNNIGFFKSILQ-----CIFNAQFFIQMTLFAF 277
Cdd:cd06174  148 GF--GWRAVFLIAAAL---ALLAAILLLLVVPDPPESARAKNEEASSKSVLKLLKRVLKnpglwLLLLAIFLVNLAYYSF 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 278 AFSLLWSLMIFLdgplkDQGYEMAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEIIRVCTVGFSCSVITLRMFLNQPrtg 357
Cdd:cd06174  223 STLLPLFLLDLG-----GLSVAVAGLLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLL--- 294
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 358 lfdsiIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQNYTEKLHLFYAQSWKFAldv 437
Cdd:cd06174  295 -----LLLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVL--- 366
                        410
                 ....*....|...
gi 392921031 438 tCGLSIVSVILSL 450
Cdd:cd06174  367 -AVLLLLAAILLL 378
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
35-458 1.93e-08

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 56.03  E-value: 1.93e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLSDEVQIYYRGRPAngsiDVSLVTNqIFQFVAVFTGFGGMYITDNKGIKTAGLLGT 114
Cdd:COG2271    8 RWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAA----QLGLLAS-AFFLGYALGQIPAGLLADRFGRRRVLAIGL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 115 TLNVIGASIRMIASIPFikshfvrecLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIV 194
Cdd:COG2271   83 LLWGLATLLFGFATSFW---------QLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPL 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 195 PSILFGHnktiDSNSWMFFTFTLGMECLALFPFVLALFvrtklpptppsassaahqnnigffksilqcifnAQFFIQMTL 274
Cdd:COG2271  154 LGWLLAA----FGWRAAFLILGLPGLLLALLRFWLLAL---------------------------------AYFLVYFAL 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 275 FAFAFsllWSLMIFLDGplKDQGYEMAGYPTAVCAIVGTLTSLLAGHIADKTrkFKEIIRVCTVGFSCSVITLRMFLNQP 354
Cdd:COG2271  197 YGFLT---WLPTYLVEV--RGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRL--GRRRKLVLAIGLLLAALALLLLALLP 269
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 355 rtglfDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFMFIIPFAQNYteklhLFYAQSWKFA 434
Cdd:COG2271  270 -----SPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGY-----LLDATGYQAA 339
                        410       420
                 ....*....|....*....|....
gi 392921031 435 LDVTCGLSIVSVILSLFFLRPRYR 458
Cdd:COG2271  340 FLLLAALALLAALLALLLLRETRK 363
MFS_1 pfam07690
Major Facilitator Superfamily;
85-414 8.75e-08

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 53.96  E-value: 8.75e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031   85 IFQFVAVFTGFGGMYITDNKGIKTAGLLGTTLNVIGASIRMIASIPFikshfvrecLLHAGSFIAASAQAFFLVLPSKIA 164
Cdd:pfam07690  40 LFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLW---------LLLVLRVLQGLGAGALFPAALALI 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  165 ECWFPGDQRAIANVLSFVANPAGVALGTIVPSILFGHNktidSNSWMFFTFTLgmecLALFPFVLALFVRTKLPPTPPSA 244
Cdd:pfam07690 111 ADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLF----GWRAAFLILAI----LSLLAAVLLLLPRPPPESKRPKP 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  245 SSAAHQNNIGFFKSilqcIFNAQFFIQMTLFAFAFSLLWSLMIFLDGPLKDQGYE--MAGYPTAVCAIVGTLTSLLAGHI 322
Cdd:pfam07690 183 AEEARLSLIVAWKA----LLRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSalLAGLLLGLGGLLGAIGRLLLGRL 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  323 ADKTRKFKEIIRVCTVGFSCSVITLRMFLnqprtgLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVL 402
Cdd:pfam07690 259 SDRLGRRRRLLLALLLLILAALGLLLLSL------TLSSLWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLY 332
                         330
                  ....*....|..
gi 392921031  403 VIFGSLFMFIIP 414
Cdd:pfam07690 333 NTAGSLGGALGP 344
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
35-461 3.86e-07

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 52.19  E-value: 3.86e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  35 RWLVLAVCCFLALSNAMQWISFSSLsdevqiyyrGRPANGSIDVSlvTNQIFQFVAVFTGFGGM------YITDNKGIKT 108
Cdd:COG2223    3 RWRVLLLATLAFFLAFGVWYLWSVL---------APPLAEEFGLS--AAQLGLLFAIPVLVGALlriplgFLVDRFGPRR 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 109 AGLLGTTLNVIGASIRMIASIPFIkshfvrecLLHAGSFIAASAQAFFLVlPSKIAECWFPGDQRAIANVLSFVANPAGV 188
Cdd:COG2223   72 VLLIGLLLLGIGLLLLALAVSYWL--------LLLLGLLLGIGGGGSFAV-GIALVSKWFPPDRRGLALGLAAGGGNLGA 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 189 ALGTIVPSILFGHnktidsnswmfFTFTLGMECLALFPFVLALFVRTKLPPTPPSASSAAHQNnigfFKSILQCIFNAQF 268
Cdd:COG2223  143 AVAAFLAPLLIAA-----------FGWRNAFLILGILLLVVAVLAWLFLRDPPAGAAAAAKAS----LRDQLEALRDPRF 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 269 FIQMTLFAFAFSLLWSLMIFLDGPLKDQ---GYEMAGYPTAVCAIVGTLTSLLAGHIADKTRKfkeiIRVCTVGFSCSVI 345
Cdd:COG2223  208 WLLSLLYFGTFGSFIGFSSWLPPYLVDQfglSAATAGLLAALFALLGALGRPLGGWLSDRIGG----RRVLLIVFALMAL 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 346 TLRMFLNQPRTGLFDSIIVYTLCGCLGAFSIPQFPIgvelgVETTFPVMEATS-SGVLVIFGSLFMFIIPFAQNYTEKLH 424
Cdd:COG2223  284 GLLLLALALGSLWLFLVLFLLLGLALGGGNGAVFAL-----VPDIFPTKNAGAvYGLVGAAGGLGGFLGPLLFGALLDAT 358
                        410       420       430
                 ....*....|....*....|....*....|....*..
gi 392921031 425 LFYAQSWKFALdvtcGLSIVSVILSLFFLRPRYRRLE 461
Cdd:COG2223  359 GSYTAAFLVFA----VLALVALVLTLLLYRRPRRAAA 391
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
33-458 7.07e-06

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 48.33  E-value: 7.07e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  33 PARWLVLAVCCFLALSNAMQWISFSSLSDEVQiyyRGRPANGSiDVSLVTNqIFQFVAVFTGFGGMYITDNKGIKTAGLL 112
Cdd:COG2807   14 AGRWLLLLAIVLVALNLRPAITSVGPLLPEIR---ADLGLSAT-QAGLLTT-LPLLAFGLFAPLAPRLARRFGLERTLLL 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 113 GTTLNVIGASIRMIASIPFikshfvrecLLHAGSFIAASAQAF-FLVLPSKIAEcWFPgDQRAIANVLSFVANPAGVALG 191
Cdd:COG2807   89 ALLLLAAGLLLRSLAPSVA---------LLLAGTALIGAGIAVgNVLLPGLIKR-WFP-DRVGLMTGLYTAAMGLGAALA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 192 -TIVPSIlfghnktIDSNSWmfftfTLGMECLALFPFVLALFVRTKLPPTPPSASSAAH-QNNIGFFKSILqcifnaqfF 269
Cdd:COG2807  158 aGLTVPL-------AAALGW-----RGALAVWALLALLALLLWLPLLRRRPAAAAAAPAaASLRSLWRSPL--------A 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 270 IQMTLFAFAFSLLWSLMI-FLDGPLKDQGY--EMAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEIIRVCTVgfsCSVIT 346
Cdd:COG2807  218 WLLTLFFGLQSLLYYAVVaWLPPILRDAGLsaATAGLLLSLFQLAGIPGSLLVPLLADRLGDRRPLLLLLGL---LGLAG 294
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 347 LRMFLNQPRTGLFDSIIVytlcgcLGAFSIPQFPIGVELGVETTFPVMEATS-SGVLVIFGSLFMFIIPFAqnyTEKLHL 425
Cdd:COG2807  295 LLGLLLAPGSLPWLWAVL------LGLGQGGLFPLALTLIGLRARTPAEAAAlSGMAQSVGYLLAALGPLL---VGALHD 365
                        410       420       430
                 ....*....|....*....|....*....|...
gi 392921031 426 fYAQSWKFALDVTCGLSIVSVILSLFFLRPRYR 458
Cdd:COG2807  366 -ATGSWTAALLLLAALAVLMLVAGLLAGRPYVE 397
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
36-410 2.15e-04

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 43.42  E-value: 2.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  36 WLVLAVCCFLALSNAMQWISFSSLSDEVQIyyrgrpanGSIDVSLVTNqIFQFVAVFTGFGGMYITDNKGIKTAGLLGTT 115
Cdd:COG2814   13 LALALGAFLSGLGIGIVLPALPLIAADLGA--------SPAQAGLVVT-AYLLGAALGAPLAGRLADRFGRRRVLLLGLL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 116 LNVIGASIRMIASIPFikshfvrecLLHAGSFIAASAQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIVP 195
Cdd:COG2814   84 LFALGSLLCALAPSLW---------LLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLG 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 196 SILFGHNktidSNSWMFFtftlgmeCLALFPFVLALFVRTKLPPTPPSASSAAHQNNIGFFKSILQCIfnaqFFIQMTLF 275
Cdd:COG2814  155 GLLADLF----GWRWVFL-------VNAVLALLALLLLLRLLPESRPAARARLRGSLRELLRRPRLLL----LLLLAFLL 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 276 AFAFSLLWSLMIFLDGPLKDQGYEMAGYPTAVCAIVGTLTSLLAGHIADKTRKFkeiiRVCTVGFSCSVITLRMFlnqpr 355
Cdd:COG2814  220 GFGFFALFTYLPLYLQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRR----RLLLIGLLLLALGLLLL----- 290
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 392921031 356 TGLFDSIIVYTLCGCLGAFSIPQFPIGVELGVETTFPVMEATSSGVLVIFGSLFM 410
Cdd:COG2814  291 ALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
171-368 1.51e-03

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 41.04  E-value: 1.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 171 DQRAIANVLSFVANPAGVALGTIVPSILFGHNKTIDSNSWmFFTFTLGMECLALFPFVLALFVRTKLPPTPPSASSAAhq 250
Cdd:COG2211  143 EERTRLSSWRFAFAGLGGLLASVLPPPLVAAFGGDAALGY-RLTALIFAVLGLLAFLLTFFGTKERPVPEEEKVSLKE-- 219
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 251 nnigFFKSILQCIFNAQFFIQMTLFAFAFSLLWSLMIFLdgpLKD---QGYEMAGYPTAVCAIVGTLTSLLAGHIADKTR 327
Cdd:COG2211  220 ----SLKALLKNRPFLLLLLAYLLFFLALALVAALLLYY---FKYvlgLSAALVGLLLALYFLAALLGAPLWPRLAKRFG 292
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 392921031 328 KfKEIIRVCTVGFSCSVITLRMFLNQPRTGLFDSIIVYTLC 368
Cdd:COG2211  293 K-KKAFIIGLLLAALGLLLLFFLGPGNLWLLLVLAALAGIG 332
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
85-367 3.28e-03

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 39.90  E-value: 3.28e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031  85 IFQFVAVFTGFGGMYITDNKGIKTAGLLGTTLNVIGASIRMIASIPFIkshfvrecllhagSFIAASAQAFF--LVLPSK 162
Cdd:cd17329   43 LSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWL-------------FAIALVLTGFGggLFEPAS 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 163 ---IAECWFPGDQRAIANVLSFVANpAGVALGTIVPSILFGHNKTidsnswmfFTFTLGmeclALFPFVLALFVRTKLPP 239
Cdd:cd17329  110 eamIADVTTPENRTRAFSLLYWAIN-LGVAIGPLLGGLLLLYSFR--------LLFLAA----AVLFLLAALVLLFLLPE 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 240 TPPSASSAAHQNNIGFFKSILQCIFNAQFFIQMTLFAFAFSLLWSLMIFLDGPLKDQGYEMAGYPTAVCAIVGTLTSLLA 319
Cdd:cd17329  177 TRPKRRAAEKTEILRGYKIVLRDRAFLLFLLASFLISLIYFQLESTLPVYVVEILGLGESLLGLLLALNALLIVLLQFPV 256
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 392921031 320 GHIADKTRKFKeIIRVCTVGFSCSVITLRMFLNqpRTGLFDSIIVYTL 367
Cdd:cd17329  257 ARLVERFRLRK-ILMIGILLFAIGFAVLAFANT--LAVLILAMIVLTL 301
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
267-414 3.33e-03

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 39.84  E-value: 3.33e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 267 QFFIQMTLFAFAFSLLW------SLMIFLDGPLKDQGYE--MAGYPTAVCAIVGTLTSLLAGHIADKTRKFKEIIRVCTV 338
Cdd:cd17352  178 RLLKDPTFVLLALGVSFamlgffVPFVYLPSYAKSLGIDesDAAFLLSIIGISDIVGRILLGLLADKPRIGRLYLYIFTL 257
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 392921031 339 GFsCSVITLRMFLNQPRTGLFDSIIVYTLcgCLGAFSIPQFPIGVELGVETTFPvmeaTSSGVLVIFGSLFMFIIP 414
Cdd:cd17352  258 LI-LGLSLLAFPLATTYVGLIVFSVLFGF--CSGSYSSLTPVILADLVGLEKLS----NAYGLVLLFQGLAALVGP 326
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
152-416 3.67e-03

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 39.48  E-value: 3.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 152 AQAFFLVLPSKIAECWFPGDQRAIANVLSFVANPAGVALGTIVPSILFGHNktidSNSWMFFTFtlgmeclALFPFVLAL 231
Cdd:cd17319  104 AEAGFFPGAIKALAEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLLLLF----GWRWAFIIE-------GLLGLLLAV 172
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 232 FVRtklpptppsassaahqnniGFFKSILQCIFnAQFFIQMTLFAFAFsllWSLMIFLDGplKDQGYEMAGYPTAVCAIV 311
Cdd:cd17319  173 LWW-------------------FYLRQVWGLAL-GYFGINYALYGLLT---WLPTYLKQA--RGFSLKQVGLLAAIPFLA 227
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 392921031 312 GTLTSLLAGHIADKTRKFKEiiRVCTVGfSCSVITLRMFLNQPRTGLFDSIIVYTLCG-CLGAFSIPQFPIGVELGVETT 390
Cdd:cd17319  228 GAIGMILGGRLSDRLLRGAR--RLVIII-GLLLAAVGLLLAYLTTSPVVAVILLSLAGfGIGAASPVFWSLPADLLPGEA 304
                        250       260
                 ....*....|....*....|....*.
gi 392921031 391 FpvmeATSSGVLVIFGSLFMFIIPFA 416
Cdd:cd17319  305 A----ATAGGLINSGGNLGGFVAPLL 326
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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