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Conserved domains on  [gi|442616452|ref|NP_001259576|]
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short gastrulation, isoform B [Drosophila melanogaster]

Protein Classification

CHRD and VWC domain-containing protein( domain architecture ID 10442507)

CHRD and VWC domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
594-708 1.12e-26

A domain in the BMP inhibitor chordin and in microbial proteins;


:

Pssm-ID: 214804  Cd Length: 118  Bit Score: 105.51  E-value: 1.12e-26
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    594 SAEPILLKRQEHTDAQNPHAVGMAWMSIDNECNLHYEVTLNGVPAQDLQLYLEEKPIEAIGaPVTRKLLEEF--NGSYLE 671
Cdd:smart00754    1 ETFSALLTGSQEVPPVNTGAVGGAWFTLDDDGSLHYQVTLSGLSGPETAAHIHEGEIGTNG-PVVRIPLPNPtsREGPFA 79
                            90       100       110
                    ....*....|....*....|....*....|....*..
gi 442616452    672 GFFLSMPSAELIKLEMSVCYLEVHSKHSKQLLLRGKL 708
Cdd:smart00754   80 GSVKTLTDEELRQLLAGNLYVNVHTKANPGGEIRGQV 116
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
473-585 5.77e-18

A domain in the BMP inhibitor chordin and in microbial proteins;


:

Pssm-ID: 214804  Cd Length: 118  Bit Score: 80.85  E-value: 5.77e-18
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    473 EIFQTLLAPHSA--ESSTKSSGLAWVYLNTDGSLAYNIETEHVNTRDRP-NISL--IEEQGK-RKAKLEDLTPsfNFNQA 546
Cdd:smart00754    1 ETFSALLTGSQEvpPVNTGAVGGAWFTLDDDGSLHYQVTLSGLSGPETAaHIHEgeIGTNGPvVRIPLPNPTS--REGPF 78
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|
gi 442616452    547 IGSVEKLGPKVLESLYAGELGVNVATEHETSL-IRGRLVP 585
Cdd:smart00754   79 AGSVKTLTDEELRQLLAGNLYVNVHTKANPGGeIRGQVAK 118
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
744-803 1.53e-15

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


:

Pssm-ID: 278520  Cd Length: 57  Bit Score: 71.69  E-value: 1.53e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452   744 CFHSGRFYNESEQWRSaqDSCQMCACLRGQSSCEVIKCPALKCKSTEqLLQRDGECCPSC 803
Cdd:pfam00093    1 CVQNGVVYENGETWKP--DLCTICTCDDGKVLCDKIICPPLDCPNPR-LEIPPGECCPVC 57
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
341-467 9.71e-15

A domain in the BMP inhibitor chordin and in microbial proteins;


:

Pssm-ID: 214804  Cd Length: 118  Bit Score: 71.61  E-value: 9.71e-15
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    341 ELFSSLLEaplPDGKTDPQLAGAGGTAIVSTSSGaaSSMHLTLVFNGVFGAEEyadaALSVKI-ELAERKEVIFDEIPRV 419
Cdd:smart00754    1 ETFSALLT---GSQEVPPVNTGAVGGAWFTLDDD--GSLHYQVTLSGLSGPET----AAHIHEgEIGTNGPVVRIPLPNP 71
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|....*...
gi 442616452    420 RkpSAEINVLELSSPISIQNLRLMSRGKLLLTVESKKYPHLRIQGHIV 467
Cdd:smart00754   72 T--SREGPFAGSVKTLTDEELRQLLAGNLYVNVHTKANPGGEIRGQVA 117
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
200-334 2.76e-13

A domain in the BMP inhibitor chordin and in microbial proteins;


:

Pssm-ID: 214804  Cd Length: 118  Bit Score: 67.37  E-value: 2.76e-13
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    200 HYAALLTGRTsyflkgeemksmYTTYNPQNVVATARFLF-HKKNLYYSFYTS--SRIGRPRAIQ--FVDDAGvileeHQL 274
Cdd:smart00754    2 TFSALLTGSQ------------EVPPVNTGAVGGAWFTLdDDGSLHYQVTLSglSGPETAAHIHegEIGTNG-----PVV 64
                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    275 ETTLAGTLSvyqnATGKICGVWRRVPRDYKRILRDDRLHVVLLWGNKQQAElaLAGKVAK 334
Cdd:smart00754   65 RIPLPNPTS----REGPFAGSVKTLTDEELRQLLAGNLYVNVHTKANPGGE--IRGQVAK 118
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
832-898 4.73e-12

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


:

Pssm-ID: 278520  Cd Length: 57  Bit Score: 61.67  E-value: 4.73e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442616452   832 CRLGEQFHPAGASWHPFLppngfdtCTTCSCDPLtlEIRCPRLVCPPLQCSEKLaYRPDKKACCKIC 898
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL-------CTICTCDDG--KVLCDKIICPPLDCPNPR-LEIPPGECCPVC 57
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
941-1017 2.52e-11

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


:

Pssm-ID: 278520  Cd Length: 57  Bit Score: 59.75  E-value: 2.52e-11
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442616452   941 CKVVNKVYENGQEWHPILmshgeqkCIKCRCKDSKVNCDRKRCSRSTCQQQTRVtskrrlfekpdaaaPAIDECCST 1017
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL-------CTICTCDDGKVLCDKIICPPLDCPNPRLE--------------IPPGECCPV 56
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
102-174 3.00e-08

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


:

Pssm-ID: 278520  Cd Length: 57  Bit Score: 50.89  E-value: 3.00e-08
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 442616452   102 CQFGKVLRELGSTWYADLgppfgvmyCIKCECVaipkkrriVARVQCRNIKneCPPAKCDDP--ISLPGKCCKTC 174
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL--------CTICTCD--------DGKVLCDKII--CPPLDCPNPrlEIPPGECCPVC 57
 
Name Accession Description Interval E-value
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
594-708 1.12e-26

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 105.51  E-value: 1.12e-26
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    594 SAEPILLKRQEHTDAQNPHAVGMAWMSIDNECNLHYEVTLNGVPAQDLQLYLEEKPIEAIGaPVTRKLLEEF--NGSYLE 671
Cdd:smart00754    1 ETFSALLTGSQEVPPVNTGAVGGAWFTLDDDGSLHYQVTLSGLSGPETAAHIHEGEIGTNG-PVVRIPLPNPtsREGPFA 79
                            90       100       110
                    ....*....|....*....|....*....|....*..
gi 442616452    672 GFFLSMPSAELIKLEMSVCYLEVHSKHSKQLLLRGKL 708
Cdd:smart00754   80 GSVKTLTDEELRQLLAGNLYVNVHTKANPGGEIRGQV 116
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
473-585 5.77e-18

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 80.85  E-value: 5.77e-18
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    473 EIFQTLLAPHSA--ESSTKSSGLAWVYLNTDGSLAYNIETEHVNTRDRP-NISL--IEEQGK-RKAKLEDLTPsfNFNQA 546
Cdd:smart00754    1 ETFSALLTGSQEvpPVNTGAVGGAWFTLDDDGSLHYQVTLSGLSGPETAaHIHEgeIGTNGPvVRIPLPNPTS--REGPF 78
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|
gi 442616452    547 IGSVEKLGPKVLESLYAGELGVNVATEHETSL-IRGRLVP 585
Cdd:smart00754   79 AGSVKTLTDEELRQLLAGNLYVNVHTKANPGGeIRGQVAK 118
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
744-803 1.53e-15

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 71.69  E-value: 1.53e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452   744 CFHSGRFYNESEQWRSaqDSCQMCACLRGQSSCEVIKCPALKCKSTEqLLQRDGECCPSC 803
Cdd:pfam00093    1 CVQNGVVYENGETWKP--DLCTICTCDDGKVLCDKIICPPLDCPNPR-LEIPPGECCPVC 57
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
341-467 9.71e-15

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 71.61  E-value: 9.71e-15
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    341 ELFSSLLEaplPDGKTDPQLAGAGGTAIVSTSSGaaSSMHLTLVFNGVFGAEEyadaALSVKI-ELAERKEVIFDEIPRV 419
Cdd:smart00754    1 ETFSALLT---GSQEVPPVNTGAVGGAWFTLDDD--GSLHYQVTLSGLSGPET----AAHIHEgEIGTNGPVVRIPLPNP 71
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|....*...
gi 442616452    420 RkpSAEINVLELSSPISIQNLRLMSRGKLLLTVESKKYPHLRIQGHIV 467
Cdd:smart00754   72 T--SREGPFAGSVKTLTDEELRQLLAGNLYVNVHTKANPGGEIRGQVA 117
VWC smart00214
von Willebrand factor (vWF) type C domain;
744-803 2.70e-13

von Willebrand factor (vWF) type C domain;


Pssm-ID: 214564  Cd Length: 59  Bit Score: 65.23  E-value: 2.70e-13
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 442616452    744 CFHSGRFYNESEQWRSaqDSCQMCACLRGQS-SCEVIKCP-ALKCKSTEqLLQRDGECCPSC 803
Cdd:smart00214    1 CVHNGRVYNDGETWKP--DPCQICTCLDGTTvLCDPVECPpPPDCPNPE-RVKPPGECCPRC 59
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
200-334 2.76e-13

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 67.37  E-value: 2.76e-13
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    200 HYAALLTGRTsyflkgeemksmYTTYNPQNVVATARFLF-HKKNLYYSFYTS--SRIGRPRAIQ--FVDDAGvileeHQL 274
Cdd:smart00754    2 TFSALLTGSQ------------EVPPVNTGAVGGAWFTLdDDGSLHYQVTLSglSGPETAAHIHegEIGTNG-----PVV 64
                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    275 ETTLAGTLSvyqnATGKICGVWRRVPRDYKRILRDDRLHVVLLWGNKQQAElaLAGKVAK 334
Cdd:smart00754   65 RIPLPNPTS----REGPFAGSVKTLTDEELRQLLAGNLYVNVHTKANPGGE--IRGQVAK 118
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
832-898 4.73e-12

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 61.67  E-value: 4.73e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442616452   832 CRLGEQFHPAGASWHPFLppngfdtCTTCSCDPLtlEIRCPRLVCPPLQCSEKLaYRPDKKACCKIC 898
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL-------CTICTCDDG--KVLCDKIICPPLDCPNPR-LEIPPGECCPVC 57
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
941-1017 2.52e-11

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 59.75  E-value: 2.52e-11
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442616452   941 CKVVNKVYENGQEWHPILmshgeqkCIKCRCKDSKVNCDRKRCSRSTCQQQTRVtskrrlfekpdaaaPAIDECCST 1017
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL-------CTICTCDDGKVLCDKIICPPLDCPNPRLE--------------IPPGECCPV 56
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
102-174 3.00e-08

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 50.89  E-value: 3.00e-08
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 442616452   102 CQFGKVLRELGSTWYADLgppfgvmyCIKCECVaipkkrriVARVQCRNIKneCPPAKCDDP--ISLPGKCCKTC 174
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL--------CTICTCD--------DGKVLCDKII--CPPLDCPNPrlEIPPGECCPVC 57
CHRD pfam07452
CHRD domain; CHRD (after SWISS-PROT abbreviation for chordin) is a novel domain identified in ...
598-708 5.09e-04

CHRD domain; CHRD (after SWISS-PROT abbreviation for chordin) is a novel domain identified in chordin, an inhibitor of bone morphogenetic proteins. This family includes bacterial homologs. It is anticipated to have an immunoglobulin-like beta-barrel structure based on limited similarity to superoxide dismutases but, as yet, no clear functional prediction can be made. Its most conserved feature is a GE[I/L]RCG[V/I/L] motif towards its C-terminal end Most bacterial proteins in this family have only one CHRD domain, whereas it is found repeated in many eukaryotic proteins such as human chordin and Drosophila SOG..


Pssm-ID: 462167  Cd Length: 118  Bit Score: 40.93  E-value: 5.09e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452   598 ILLKRQEHTDAQNPHAVGMAWMSID-NECNLHYEVTLNGVPAQDLqLYLEEKPIEAIGAPV----TRKLLEEFNGSYLEG 672
Cdd:pfam07452    4 LLTGAQEVPPPVTTGAGGTAVLTLDdTENTLHYTLTFSGLSVPTA-AHIHAGAAGFNGPVVvpleGGPRKTTLLAVPEGL 82
                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 442616452   673 FFLSMPSAELIKLEMSVCYLEVHSKHSKQLLLRGKL 708
Cdd:pfam07452   83 ATLTAAQLAALLAQQGELYVNVHTEGNPGGEIRGQI 118
 
Name Accession Description Interval E-value
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
594-708 1.12e-26

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 105.51  E-value: 1.12e-26
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    594 SAEPILLKRQEHTDAQNPHAVGMAWMSIDNECNLHYEVTLNGVPAQDLQLYLEEKPIEAIGaPVTRKLLEEF--NGSYLE 671
Cdd:smart00754    1 ETFSALLTGSQEVPPVNTGAVGGAWFTLDDDGSLHYQVTLSGLSGPETAAHIHEGEIGTNG-PVVRIPLPNPtsREGPFA 79
                            90       100       110
                    ....*....|....*....|....*....|....*..
gi 442616452    672 GFFLSMPSAELIKLEMSVCYLEVHSKHSKQLLLRGKL 708
Cdd:smart00754   80 GSVKTLTDEELRQLLAGNLYVNVHTKANPGGEIRGQV 116
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
473-585 5.77e-18

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 80.85  E-value: 5.77e-18
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    473 EIFQTLLAPHSA--ESSTKSSGLAWVYLNTDGSLAYNIETEHVNTRDRP-NISL--IEEQGK-RKAKLEDLTPsfNFNQA 546
Cdd:smart00754    1 ETFSALLTGSQEvpPVNTGAVGGAWFTLDDDGSLHYQVTLSGLSGPETAaHIHEgeIGTNGPvVRIPLPNPTS--REGPF 78
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|
gi 442616452    547 IGSVEKLGPKVLESLYAGELGVNVATEHETSL-IRGRLVP 585
Cdd:smart00754   79 AGSVKTLTDEELRQLLAGNLYVNVHTKANPGGeIRGQVAK 118
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
744-803 1.53e-15

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 71.69  E-value: 1.53e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452   744 CFHSGRFYNESEQWRSaqDSCQMCACLRGQSSCEVIKCPALKCKSTEqLLQRDGECCPSC 803
Cdd:pfam00093    1 CVQNGVVYENGETWKP--DLCTICTCDDGKVLCDKIICPPLDCPNPR-LEIPPGECCPVC 57
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
341-467 9.71e-15

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 71.61  E-value: 9.71e-15
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    341 ELFSSLLEaplPDGKTDPQLAGAGGTAIVSTSSGaaSSMHLTLVFNGVFGAEEyadaALSVKI-ELAERKEVIFDEIPRV 419
Cdd:smart00754    1 ETFSALLT---GSQEVPPVNTGAVGGAWFTLDDD--GSLHYQVTLSGLSGPET----AAHIHEgEIGTNGPVVRIPLPNP 71
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|....*...
gi 442616452    420 RkpSAEINVLELSSPISIQNLRLMSRGKLLLTVESKKYPHLRIQGHIV 467
Cdd:smart00754   72 T--SREGPFAGSVKTLTDEELRQLLAGNLYVNVHTKANPGGEIRGQVA 117
VWC smart00214
von Willebrand factor (vWF) type C domain;
744-803 2.70e-13

von Willebrand factor (vWF) type C domain;


Pssm-ID: 214564  Cd Length: 59  Bit Score: 65.23  E-value: 2.70e-13
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 442616452    744 CFHSGRFYNESEQWRSaqDSCQMCACLRGQS-SCEVIKCP-ALKCKSTEqLLQRDGECCPSC 803
Cdd:smart00214    1 CVHNGRVYNDGETWKP--DPCQICTCLDGTTvLCDPVECPpPPDCPNPE-RVKPPGECCPRC 59
CHRD smart00754
A domain in the BMP inhibitor chordin and in microbial proteins;
200-334 2.76e-13

A domain in the BMP inhibitor chordin and in microbial proteins;


Pssm-ID: 214804  Cd Length: 118  Bit Score: 67.37  E-value: 2.76e-13
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    200 HYAALLTGRTsyflkgeemksmYTTYNPQNVVATARFLF-HKKNLYYSFYTS--SRIGRPRAIQ--FVDDAGvileeHQL 274
Cdd:smart00754    2 TFSALLTGSQ------------EVPPVNTGAVGGAWFTLdDDGSLHYQVTLSglSGPETAAHIHegEIGTNG-----PVV 64
                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452    275 ETTLAGTLSvyqnATGKICGVWRRVPRDYKRILRDDRLHVVLLWGNKQQAElaLAGKVAK 334
Cdd:smart00754   65 RIPLPNPTS----REGPFAGSVKTLTDEELRQLLAGNLYVNVHTKANPGGE--IRGQVAK 118
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
832-898 4.73e-12

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 61.67  E-value: 4.73e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442616452   832 CRLGEQFHPAGASWHPFLppngfdtCTTCSCDPLtlEIRCPRLVCPPLQCSEKLaYRPDKKACCKIC 898
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL-------CTICTCDDG--KVLCDKIICPPLDCPNPR-LEIPPGECCPVC 57
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
941-1017 2.52e-11

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 59.75  E-value: 2.52e-11
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442616452   941 CKVVNKVYENGQEWHPILmshgeqkCIKCRCKDSKVNCDRKRCSRSTCQQQTRVtskrrlfekpdaaaPAIDECCST 1017
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL-------CTICTCDDGKVLCDKIICPPLDCPNPRLE--------------IPPGECCPV 56
VWC pfam00093
von Willebrand factor type C domain; The high cutoff was used to prevent overlap with ...
102-174 3.00e-08

von Willebrand factor type C domain; The high cutoff was used to prevent overlap with pfam00094.


Pssm-ID: 278520  Cd Length: 57  Bit Score: 50.89  E-value: 3.00e-08
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 442616452   102 CQFGKVLRELGSTWYADLgppfgvmyCIKCECVaipkkrriVARVQCRNIKneCPPAKCDDP--ISLPGKCCKTC 174
Cdd:pfam00093    1 CVQNGVVYENGETWKPDL--------CTICTCD--------DGKVLCDKII--CPPLDCPNPrlEIPPGECCPVC 57
CHRD pfam07452
CHRD domain; CHRD (after SWISS-PROT abbreviation for chordin) is a novel domain identified in ...
598-708 5.09e-04

CHRD domain; CHRD (after SWISS-PROT abbreviation for chordin) is a novel domain identified in chordin, an inhibitor of bone morphogenetic proteins. This family includes bacterial homologs. It is anticipated to have an immunoglobulin-like beta-barrel structure based on limited similarity to superoxide dismutases but, as yet, no clear functional prediction can be made. Its most conserved feature is a GE[I/L]RCG[V/I/L] motif towards its C-terminal end Most bacterial proteins in this family have only one CHRD domain, whereas it is found repeated in many eukaryotic proteins such as human chordin and Drosophila SOG..


Pssm-ID: 462167  Cd Length: 118  Bit Score: 40.93  E-value: 5.09e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442616452   598 ILLKRQEHTDAQNPHAVGMAWMSID-NECNLHYEVTLNGVPAQDLqLYLEEKPIEAIGAPV----TRKLLEEFNGSYLEG 672
Cdd:pfam07452    4 LLTGAQEVPPPVTTGAGGTAVLTLDdTENTLHYTLTFSGLSVPTA-AHIHAGAAGFNGPVVvpleGGPRKTTLLAVPEGL 82
                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 442616452   673 FFLSMPSAELIKLEMSVCYLEVHSKHSKQLLLRGKL 708
Cdd:pfam07452   83 ATLTAAQLAALLAQQGELYVNVHTEGNPGGEIRGQI 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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