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Conserved domains on  [gi|544346257|ref|NP_001269691|]
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protein CDV3 homolog isoform d [Homo sapiens]

Protein Classification

CDV3 domain-containing protein( domain architecture ID 10634031)

CDV3 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CDV3 pfam15359
Carnitine deficiency-associated protein 3; This family of proteins is found in eukaryotes. ...
 1-101 1.38e-34

Carnitine deficiency-associated protein 3; This family of proteins is found in eukaryotes. Proteins in this family are typically between 128 and 251 amino acids in length. CDV3 is also known as TPP36 - tyrosine-phosphorylated protein 36. The function is not known.


:

Pssm-ID: 464669  Cd Length: 128  Bit Score: 117.16  E-value: 1.38e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346257    1 MQIS--SEKEEDDNEKRQDPGDNWEEGGgggggmEKSSGPWNKTAPVQAPPA----PVIVTETPEPAMTSGVYRPPGARL 74
Cdd:pfam15359  23 LQISekDEKEEEENEEKEEYGEAGEELG------DKSSGPWNKSAAAPQPAAvatpPVEPEPVPEPAKTSGVYRPPGARN 96

                          90       100       110
                  ....*....|....*....|....*....|..
gi 544346257   75 TTT-----RKTPQGPPEIYSDTQFPSLQSTAK 101
Cdd:pfam15359  97 TTTqqegrRRRKQGAPEIFSEEQFPSLQATAQ 128
 
Name Accession Description Interval E-value
CDV3 pfam15359
Carnitine deficiency-associated protein 3; This family of proteins is found in eukaryotes. ...
 1-101 1.38e-34

Carnitine deficiency-associated protein 3; This family of proteins is found in eukaryotes. Proteins in this family are typically between 128 and 251 amino acids in length. CDV3 is also known as TPP36 - tyrosine-phosphorylated protein 36. The function is not known.


Pssm-ID: 464669  Cd Length: 128  Bit Score: 117.16  E-value: 1.38e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346257    1 MQIS--SEKEEDDNEKRQDPGDNWEEGGgggggmEKSSGPWNKTAPVQAPPA----PVIVTETPEPAMTSGVYRPPGARL 74
Cdd:pfam15359  23 LQISekDEKEEEENEEKEEYGEAGEELG------DKSSGPWNKSAAAPQPAAvatpPVEPEPVPEPAKTSGVYRPPGARN 96

                          90       100       110
                  ....*....|....*....|....*....|..
gi 544346257   75 TTT-----RKTPQGPPEIYSDTQFPSLQSTAK 101
Cdd:pfam15359  97 TTTqqegrRRRKQGAPEIFSEEQFPSLQATAQ 128
 
Name Accession Description Interval E-value
CDV3 pfam15359
Carnitine deficiency-associated protein 3; This family of proteins is found in eukaryotes. ...
 1-101 1.38e-34

Carnitine deficiency-associated protein 3; This family of proteins is found in eukaryotes. Proteins in this family are typically between 128 and 251 amino acids in length. CDV3 is also known as TPP36 - tyrosine-phosphorylated protein 36. The function is not known.


Pssm-ID: 464669  Cd Length: 128  Bit Score: 117.16  E-value: 1.38e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544346257    1 MQIS--SEKEEDDNEKRQDPGDNWEEGGgggggmEKSSGPWNKTAPVQAPPA----PVIVTETPEPAMTSGVYRPPGARL 74
Cdd:pfam15359  23 LQISekDEKEEEENEEKEEYGEAGEELG------DKSSGPWNKSAAAPQPAAvatpPVEPEPVPEPAKTSGVYRPPGARN 96

                          90       100       110
                  ....*....|....*....|....*....|..
gi 544346257   75 TTT-----RKTPQGPPEIYSDTQFPSLQSTAK 101
Cdd:pfam15359  97 TTTqqegrRRRKQGAPEIFSEEQFPSLQATAQ 128
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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