NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|554790245|ref|NP_001272996|]
View 

ester hydrolase C11orf54 isoform a [Homo sapiens]

Protein Classification

PTD012 family protein( domain architecture ID 13022627)

PTD012 family protein similar to Homo sapiens PTD012 (also called ester hydrolase C11orf54), a zinc-containing hydrolase fold protein which exhibits ester hydrolase activity on the substrate p-nitrophenyl acetate

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
DUF1907 cd17298
proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain ...
14-304 0e+00

proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif (x could be any residue) that coordinates a zinc ion, and an acetate anion at a site that may support the enzymatic activity of a ester. In vitro hydrolytic activity towards para-nitrophenylacetate for the human enzyme was reported. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


:

Pssm-ID: 341210  Cd Length: 287  Bit Score: 519.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  14 EELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAF 93
Cdd:cd17298    1 EELAAVLQDGLKKNFEEVSVSVVDCPDLTQEPFNLAAPGLCGSPRIADVGGVPYLLPLPQLDKVYDLKDIAKLMGLPDGF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  94 ILGAGAGPFQTLGFNSEFMPVIQTESEhKPPVNGSYFAHVNPADGGCLLEKYSEKCHDfqCALLANLFASEGQPGKVIEV 173
Cdd:cd17298   81 IIGAGAGPFPVVGVNCELMPNLSISGG-GVVTNGSRIAKVDPDNGSCELEKLPDSETR--FALLGNLFASEGKPGKVLKV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245 174 KAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPaEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVF 253
Cdd:cd17298  158 KAKKRTGEDNFITCIRKALAEHYGDKPVGLGGVFLIKKGKAKLHVMP-DFSKTPLNSDEDVNNWLKFFEMSAPLVCLGVL 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 554790245 254 VSRDPGFDLRLEHTHFFSRHGEGGHYHYDTTPDIVEYLGYFLPAEFLYRID 304
Cdd:cd17298  237 VSHDPGLDLRLEHTHCFSDHGEGGHYHYDTTPDTVEYEGYFNVAEKLYRID 287
 
Name Accession Description Interval E-value
DUF1907 cd17298
proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain ...
14-304 0e+00

proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif (x could be any residue) that coordinates a zinc ion, and an acetate anion at a site that may support the enzymatic activity of a ester. In vitro hydrolytic activity towards para-nitrophenylacetate for the human enzyme was reported. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


Pssm-ID: 341210  Cd Length: 287  Bit Score: 519.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  14 EELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAF 93
Cdd:cd17298    1 EELAAVLQDGLKKNFEEVSVSVVDCPDLTQEPFNLAAPGLCGSPRIADVGGVPYLLPLPQLDKVYDLKDIAKLMGLPDGF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  94 ILGAGAGPFQTLGFNSEFMPVIQTESEhKPPVNGSYFAHVNPADGGCLLEKYSEKCHDfqCALLANLFASEGQPGKVIEV 173
Cdd:cd17298   81 IIGAGAGPFPVVGVNCELMPNLSISGG-GVVTNGSRIAKVDPDNGSCELEKLPDSETR--FALLGNLFASEGKPGKVLKV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245 174 KAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPaEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVF 253
Cdd:cd17298  158 KAKKRTGEDNFITCIRKALAEHYGDKPVGLGGVFLIKKGKAKLHVMP-DFSKTPLNSDEDVNNWLKFFEMSAPLVCLGVL 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 554790245 254 VSRDPGFDLRLEHTHFFSRHGEGGHYHYDTTPDIVEYLGYFLPAEFLYRID 304
Cdd:cd17298  237 VSHDPGLDLRLEHTHCFSDHGEGGHYHYDTTPDTVEYEGYFNVAEKLYRID 287
DUF1907 pfam08925
Domain of Unknown Function (DUF1907); The structure of this domain displays an ...
21-303 0e+00

Domain of Unknown Function (DUF1907); The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif that coordinates a zinc ion, and an acetate anion at a site that likely supports the enzymatic activity of an ester hydrolase.


Pssm-ID: 462636  Cd Length: 281  Bit Score: 502.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245   21 QKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAG 100
Cdd:pfam08925   1 QDGLTSNFEHVSVSVVDCPDLRQAPFHLAAEGLCGNPRIADVGGPPYLLPLPRLDKLYDLIDIAKRMGLPGGFIIGAGAG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  101 PFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEKcHDFQCALLANLFASEGQPGKVIEVKAKRRTG 180
Cdd:pfam08925  81 PFPVVGVNCELIPNLSWQGDGKNVVNGSRIAKVNPEDGSCCLLEYPNS-EDCRFALLANLFGSEGKPGKVLKVVAKKRTG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  181 PLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPaEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFVSRDPGF 260
Cdd:pfam08925 160 DKSFTTCIRKALAKHYGDKPVGLGGVFLIKNGKAKFHVMP-DFSKTPLKTEEDVNNWLKFFEMSAPLVCLGVLVSHDPGL 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 554790245  261 DLRLEHTHFFSRHGEGGHYHYDTTPDIVEYLGYFLPAEFLYRI 303
Cdd:pfam08925 239 DLRLEHTHCFSHHGEGGHYHYDTTPETVEYEGYFNPAKKLYRI 281
 
Name Accession Description Interval E-value
DUF1907 cd17298
proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain ...
14-304 0e+00

proteins similar to putative ester hydrolase C11orf54/PTD012; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif (x could be any residue) that coordinates a zinc ion, and an acetate anion at a site that may support the enzymatic activity of a ester. In vitro hydrolytic activity towards para-nitrophenylacetate for the human enzyme was reported. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


Pssm-ID: 341210  Cd Length: 287  Bit Score: 519.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  14 EELAGVMQKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAF 93
Cdd:cd17298    1 EELAAVLQDGLKKNFEEVSVSVVDCPDLTQEPFNLAAPGLCGSPRIADVGGVPYLLPLPQLDKVYDLKDIAKLMGLPDGF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  94 ILGAGAGPFQTLGFNSEFMPVIQTESEhKPPVNGSYFAHVNPADGGCLLEKYSEKCHDfqCALLANLFASEGQPGKVIEV 173
Cdd:cd17298   81 IIGAGAGPFPVVGVNCELMPNLSISGG-GVVTNGSRIAKVDPDNGSCELEKLPDSETR--FALLGNLFASEGKPGKVLKV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245 174 KAKRRTGPLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPaEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVF 253
Cdd:cd17298  158 KAKKRTGEDNFITCIRKALAEHYGDKPVGLGGVFLIKKGKAKLHVMP-DFSKTPLNSDEDVNNWLKFFEMSAPLVCLGVL 236
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 554790245 254 VSRDPGFDLRLEHTHFFSRHGEGGHYHYDTTPDIVEYLGYFLPAEFLYRID 304
Cdd:cd17298  237 VSHDPGLDLRLEHTHCFSDHGEGGHYHYDTTPDTVEYEGYFNVAEKLYRID 287
DUF1907 pfam08925
Domain of Unknown Function (DUF1907); The structure of this domain displays an ...
21-303 0e+00

Domain of Unknown Function (DUF1907); The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxH motif that coordinates a zinc ion, and an acetate anion at a site that likely supports the enzymatic activity of an ester hydrolase.


Pssm-ID: 462636  Cd Length: 281  Bit Score: 502.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245   21 QKGLKDNFADVQVSVVDCPDLTKEPFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAG 100
Cdd:pfam08925   1 QDGLTSNFEHVSVSVVDCPDLRQAPFHLAAEGLCGNPRIADVGGPPYLLPLPRLDKLYDLIDIAKRMGLPGGFIIGAGAG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  101 PFQTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEKcHDFQCALLANLFASEGQPGKVIEVKAKRRTG 180
Cdd:pfam08925  81 PFPVVGVNCELIPNLSWQGDGKNVVNGSRIAKVNPEDGSCCLLEYPNS-EDCRFALLANLFGSEGKPGKVLKVVAKKRTG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  181 PLNFVTCMRETLEKHYGNKPIGMGGTFIIQKGKVKSHIMPaEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFVSRDPGF 260
Cdd:pfam08925 160 DKSFTTCIRKALAKHYGDKPVGLGGVFLIKNGKAKFHVMP-DFSKTPLKTEEDVNNWLKFFEMSAPLVCLGVLVSHDPGL 238
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 554790245  261 DLRLEHTHFFSRHGEGGHYHYDTTPDIVEYLGYFLPAEFLYRI 303
Cdd:pfam08925 239 DLRLEHTHCFSHHGEGGHYHYDTTPETVEYEGYFNPAKKLYRI 281
AldB-like cd17297
proteins similar to alpha-acetolactate dehydrogenase; The structure of this domain displays an ...
56-304 1.18e-47

proteins similar to alpha-acetolactate dehydrogenase; The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an H(x)H(x)nH motif (x could be any residue, n could be 9 or 10) that coordinates a zinc ion. The proteins are homologous to bacterial alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5), which converts acetolactate into acetoin.


Pssm-ID: 341209  Cd Length: 209  Bit Score: 158.78  E-value: 1.18e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245  56 KTRIAEVGGVPYLLPLVNQKkVYDLNKIAKEIklpgafILGAGAGPFQtlgfNSEFMPVIqtesehkppvNGSYFAHVNp 135
Cdd:cd17297    1 NNTLYQVSTIGALLPGVYDG-TYTLKELLKHG------DFGLGTFDGL----DGELIILD----------GKAYQAKAD- 58
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245 136 adggCLLEKYSEKchdfQCALLANLFASEGQpgkvIEVKAKRRTGPLNFVTCMRETLEkhygNKPIGMGGTFIIQKGKVK 215
Cdd:cd17297   59 ----GSVEKVPDD----ETTPFANVTFFEPD----LTVTLKGRTGLEDLEAALDKLLP----SKNVFYAIRIDGTFGKVK 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 554790245 216 SHIMPAeFSSCPLNsDEEVNKWLHFYEMK-APLVCLPVFVSRDP-GFDLRLEHTHFFSRH-GEGGHYHYDTTpdiVEYLG 292
Cdd:cd17297  123 TRSVPK-QEKPYPP-LAEVAKWQKEFEFEnVPGTLVGFYTPEYPgGINVPGYHLHFLSDDrKFGGHVLDFTT---VEGEV 197
                        250
                 ....*....|..
gi 554790245 293 YFLPAEFLYRID 304
Cdd:cd17297  198 YIQVAEKLYLIL 209
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH