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Conserved domains on  [gi|665390678|ref|NP_001285107|]
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uncharacterized protein Dmel_CG2076, isoform B [Drosophila melanogaster]

Protein Classification

Bax inhibitor 1 family protein; Bax inhibitor-1/YccA family protein( domain architecture ID 10179634)

Bax inhibitor 1 family protein similar to Saccharomyces cerevisiae Bax inhibitor 1 that links the unfolded protein response and programmed cell death, and mediates mitochondrial-dependent apoptosis| Bax inhibitor-1/YccA family protein is a small transmembrane protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GHITM cd10431
Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in ...
93-341 2.43e-132

Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in mammalian cells and expression has also been observed in various cancer cell lines. A cytoprotective function has been suggested. It is closely related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect.


:

Pssm-ID: 198413  Cd Length: 264  Bit Score: 377.88  E-value: 2.43e-132
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  93 LCYYGVGLGKQTSIADNAIMWPQFVRDRIQSTYAFFGGSCVLTAAAAAATFRSHRLLELASRGGILATIASLALVIGSGA 172
Cdd:cd10431   16 LCYYGLGLSSEIGAIEKAVIWPQYVRDRIHSTYMYFGGSLGLTALAAVALSRSPALMRLMAAGPWLAIGATLAAMIGSGM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 173 VARSIEYQPGLGAKHLAWAVHCAILGAVIAPICFMGGPILTRAALYTGGIVGGLSTIAACAPSDKFLYMGGPLAIGLGVV 252
Cdd:cd10431   96 LVRSYTYPENPGAKHLAWLGHSGVQGAVLAPLCFLGGPLLIRAALYTAGIVGGLSTVAACAPSEKFLYMGGPLAIGLGVV 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 253 FASSLASMWLPPTTALGAGLASMSLYGGLVLFSGFLLYDTQRMVRRAEVYPQYSYTPYDPINASMSIYMDVLNIFIRIVT 332
Cdd:cd10431  176 FASSLGSMFLPPTTALGAGLYSVSLYGGLVLFGGFLLYDTQKIIKRAETHPLYGVRKYDPINASMSIYMDTINIFIRLVT 255

                 ....*....
gi 665390678 333 ILSGGQRRK 341
Cdd:cd10431  256 ILAGGGNRR 264
 
Name Accession Description Interval E-value
GHITM cd10431
Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in ...
93-341 2.43e-132

Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in mammalian cells and expression has also been observed in various cancer cell lines. A cytoprotective function has been suggested. It is closely related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect.


Pssm-ID: 198413  Cd Length: 264  Bit Score: 377.88  E-value: 2.43e-132
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  93 LCYYGVGLGKQTSIADNAIMWPQFVRDRIQSTYAFFGGSCVLTAAAAAATFRSHRLLELASRGGILATIASLALVIGSGA 172
Cdd:cd10431   16 LCYYGLGLSSEIGAIEKAVIWPQYVRDRIHSTYMYFGGSLGLTALAAVALSRSPALMRLMAAGPWLAIGATLAAMIGSGM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 173 VARSIEYQPGLGAKHLAWAVHCAILGAVIAPICFMGGPILTRAALYTGGIVGGLSTIAACAPSDKFLYMGGPLAIGLGVV 252
Cdd:cd10431   96 LVRSYTYPENPGAKHLAWLGHSGVQGAVLAPLCFLGGPLLIRAALYTAGIVGGLSTVAACAPSEKFLYMGGPLAIGLGVV 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 253 FASSLASMWLPPTTALGAGLASMSLYGGLVLFSGFLLYDTQRMVRRAEVYPQYSYTPYDPINASMSIYMDVLNIFIRIVT 332
Cdd:cd10431  176 FASSLGSMFLPPTTALGAGLYSVSLYGGLVLFGGFLLYDTQKIIKRAETHPLYGVRKYDPINASMSIYMDTINIFIRLVT 255

                 ....*....
gi 665390678 333 ILSGGQRRK 341
Cdd:cd10431  256 ILAGGGNRR 264
Bax1-I pfam01027
Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family ...
118-334 9.95e-37

Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak). Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localized to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localize predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress. BI-1 appears to exert its effect through an interaction with calmodulin. The budding yeast member of this family has been found unexpectedly to encode a BH3 domain-containing protein (Ybh3p) that regulates the mitochondrial pathway of apoptosis in a phylogenetically conserved manner. Examination of the crystal structure of a bacterial member of this family shows that these proteins mediate a calcium leak across the membrane that is pH-dependent. Calcium homoeostasis balances passive calcium leak with active calcium uptake. The structure exists in a pore-closed and pore-open conformation, at pHs of 8 and 6 respectively, and the pore can be opened by intracrystalline transition; together these findings suggest that pH controls the conformational transition.


Pssm-ID: 460029  Cd Length: 207  Bit Score: 131.14  E-value: 9.95e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  118 RDRIQSTYAFFGGSCVLTAAAAAATFRSHRLL--ELASRGGILATIASLALVIGSGAVARSIEYQPglGAKHLAWAVHCA 195
Cdd:pfam01027   1 RQFLRKVYGLLALGLLLTAAVAYLVLSSPALLfpSLHPPLFWVLIIAPLGLLFGALLLARKRKYSS--NVALLLLLAFTL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  196 ILGAVIAPICFMG-GPILTRAALYTGGIVGGLSTIAACAPSDkFLYMGGPLAIGLGVVFASSLASMWLPpttalGAGLAS 274
Cdd:pfam01027  79 LMGLTLGPLLLVYtGAIIATAFLGTAAIFGGLSLYALTTKRD-LSFLGGFLFAGLIGLIVASLVNIFLP-----SSALSL 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  275 MSLYGGLVLFSGFLLYDTQRMVRRAevypqYSYTPYDPINASMSIYMDVLNIFIRIVTIL 334
Cdd:pfam01027 153 AISYLGVLLFSGFILYDTQRIIKRY-----GEYGDYDAILAALSLYLDFINLFLSLLRIL 207
YbhL COG0670
Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family ...
121-336 1.44e-16

Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family [Inorganic ion transport and metabolism];


Pssm-ID: 440434  Cd Length: 231  Bit Score: 77.53  E-value: 1.44e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 121 IQSTYAFFGGSCVLTAAAAAATFRSHRLLELA---SRGGILATIASLALVIGSGAVARSIEYQPGLGakhLAWAVhCAIL 197
Cdd:COG0670   23 LRNTYGLLALGLLLTALVAYLGMALPGLAALLfgsPGLFWVLLIAPLGLVFLLSKLANRANSAAALA---LLFAY-TALM 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 198 GAVIAPICFM-----GGPILTRAALYTGGIVGGLSTIAACAPSDkFLYMGGPLAIGLGVVFASSLASMWLPpTTALGAGL 272
Cdd:COG0670   99 GLTLSPILLVytglsGPASIAQAFGGTAATFGGLSLYGYTTKRD-LSFLGSFLFMGLIGLIIASLVNIFLQ-SPALSLAI 176
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 665390678 273 AsmslYGGLVLFSGFLLYDTQRMVRRAEVYPQYsytpydpINASMSIYMDVLNIFIRIVTILSG 336
Cdd:COG0670  177 S----VAGVLLFSGLTLYDTQRIKHGYETNKQY-------IMAALSLYLDFINLFLSLLRLLGG 229
 
Name Accession Description Interval E-value
GHITM cd10431
Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in ...
93-341 2.43e-132

Growth-hormone inducible transmembrane protein; GHITM appears to be ubiquitiously expressed in mammalian cells and expression has also been observed in various cancer cell lines. A cytoprotective function has been suggested. It is closely related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect.


Pssm-ID: 198413  Cd Length: 264  Bit Score: 377.88  E-value: 2.43e-132
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  93 LCYYGVGLGKQTSIADNAIMWPQFVRDRIQSTYAFFGGSCVLTAAAAAATFRSHRLLELASRGGILATIASLALVIGSGA 172
Cdd:cd10431   16 LCYYGLGLSSEIGAIEKAVIWPQYVRDRIHSTYMYFGGSLGLTALAAVALSRSPALMRLMAAGPWLAIGATLAAMIGSGM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 173 VARSIEYQPGLGAKHLAWAVHCAILGAVIAPICFMGGPILTRAALYTGGIVGGLSTIAACAPSDKFLYMGGPLAIGLGVV 252
Cdd:cd10431   96 LVRSYTYPENPGAKHLAWLGHSGVQGAVLAPLCFLGGPLLIRAALYTAGIVGGLSTVAACAPSEKFLYMGGPLAIGLGVV 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 253 FASSLASMWLPPTTALGAGLASMSLYGGLVLFSGFLLYDTQRMVRRAEVYPQYSYTPYDPINASMSIYMDVLNIFIRIVT 332
Cdd:cd10431  176 FASSLGSMFLPPTTALGAGLYSVSLYGGLVLFGGFLLYDTQKIIKRAETHPLYGVRKYDPINASMSIYMDTINIFIRLVT 255

                 ....*....
gi 665390678 333 ILSGGQRRK 341
Cdd:cd10431  256 ILAGGGNRR 264
Bax1-I pfam01027
Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family ...
118-334 9.95e-37

Inhibitor of apoptosis-promoting Bax1; Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak). Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localized to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localize predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress. BI-1 appears to exert its effect through an interaction with calmodulin. The budding yeast member of this family has been found unexpectedly to encode a BH3 domain-containing protein (Ybh3p) that regulates the mitochondrial pathway of apoptosis in a phylogenetically conserved manner. Examination of the crystal structure of a bacterial member of this family shows that these proteins mediate a calcium leak across the membrane that is pH-dependent. Calcium homoeostasis balances passive calcium leak with active calcium uptake. The structure exists in a pore-closed and pore-open conformation, at pHs of 8 and 6 respectively, and the pore can be opened by intracrystalline transition; together these findings suggest that pH controls the conformational transition.


Pssm-ID: 460029  Cd Length: 207  Bit Score: 131.14  E-value: 9.95e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  118 RDRIQSTYAFFGGSCVLTAAAAAATFRSHRLL--ELASRGGILATIASLALVIGSGAVARSIEYQPglGAKHLAWAVHCA 195
Cdd:pfam01027   1 RQFLRKVYGLLALGLLLTAAVAYLVLSSPALLfpSLHPPLFWVLIIAPLGLLFGALLLARKRKYSS--NVALLLLLAFTL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  196 ILGAVIAPICFMG-GPILTRAALYTGGIVGGLSTIAACAPSDkFLYMGGPLAIGLGVVFASSLASMWLPpttalGAGLAS 274
Cdd:pfam01027  79 LMGLTLGPLLLVYtGAIIATAFLGTAAIFGGLSLYALTTKRD-LSFLGGFLFAGLIGLIVASLVNIFLP-----SSALSL 152
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678  275 MSLYGGLVLFSGFLLYDTQRMVRRAevypqYSYTPYDPINASMSIYMDVLNIFIRIVTIL 334
Cdd:pfam01027 153 AISYLGVLLFSGFILYDTQRIIKRY-----GEYGDYDAILAALSLYLDFINLFLSLLRIL 207
BI-1-like cd06181
BAX inhibitor (BI)-1/YccA-like protein family; Mammalian members of the BAX inhibitor (BI)-1 ...
117-334 1.24e-30

BAX inhibitor (BI)-1/YccA-like protein family; Mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. This superfamily also contains the lifeguard(LFG)-like proteins and other subfamilies which appear to be related by common descent and also function as inhibitors of apoptosis. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.


Pssm-ID: 198409  Cd Length: 202  Bit Score: 115.20  E-value: 1.24e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 117 VRDRIQSTYAFFGGSCVLTAAAAAATFRSHrllelASRGGILATIASLALVIGSGAVARSIEYQPGLgaKHLAWAVHCAI 196
Cdd:cd06181    2 TKDFLRKVYMILALQLLLTAATATAFTVCD-----PGWYWSPALMGLLTSMLALMATAAMIRAKMPV--NLILLFGFTGL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 197 LGAVIAPICFMGGP-ILTRAALYTGGIVGGLSTIAACApSDKFLYMGGPLAIGLGVVFASSLasmwlPPTTALGAGLASM 275
Cdd:cd06181   75 MGYVVGPLLFFYGPtILLRALGGTALVFFGLTVYALQA-RKDFLFLGGPLMAGLGFLLLSFL-----LNTFFYSPWLHLV 148
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 665390678 276 SLYGGLVLFSGFLLYDTQRMVRRAEVypqysyTPYDPINASMSIYMDVLNIFIRIVTIL 334
Cdd:cd06181  149 AAAVGLVLFCGFLLYDTQLIIHKAEV------GPEDYINACISLYLDIINIFIRLLTIL 201
YbhL COG0670
Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family ...
121-336 1.44e-16

Integral membrane protein YbhL, putative Ca2+ regulator, Bax inhibitor (BI-1)/TMBIM family [Inorganic ion transport and metabolism];


Pssm-ID: 440434  Cd Length: 231  Bit Score: 77.53  E-value: 1.44e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 121 IQSTYAFFGGSCVLTAAAAAATFRSHRLLELA---SRGGILATIASLALVIGSGAVARSIEYQPGLGakhLAWAVhCAIL 197
Cdd:COG0670   23 LRNTYGLLALGLLLTALVAYLGMALPGLAALLfgsPGLFWVLLIAPLGLVFLLSKLANRANSAAALA---LLFAY-TALM 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 198 GAVIAPICFM-----GGPILTRAALYTGGIVGGLSTIAACAPSDkFLYMGGPLAIGLGVVFASSLASMWLPpTTALGAGL 272
Cdd:COG0670   99 GLTLSPILLVytglsGPASIAQAFGGTAATFGGLSLYGYTTKRD-LSFLGSFLFMGLIGLIIASLVNIFLQ-SPALSLAI 176
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 665390678 273 AsmslYGGLVLFSGFLLYDTQRMVRRAEVYPQYsytpydpINASMSIYMDVLNIFIRIVTILSG 336
Cdd:COG0670  177 S----VAGVLLFSGLTLYDTQRIKHGYETNKQY-------IMAALSLYLDFINLFLSLLRLLGG 229
BI-1 cd10430
BAX inhibitor (BI)-1; Mammalian members of the BAX inhibitor (BI)-1 like family of small ...
153-334 8.51e-16

BAX inhibitor (BI)-1; Mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance.


Pssm-ID: 198412  Cd Length: 213  Bit Score: 74.95  E-value: 8.51e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 153 SRGGILATIASLALVIGSGAVARSIEYQPG-LGAKHLAWAVHCAILGAVIAPICFMGGPILTRAALYTGGIVGGLSTIAA 231
Cdd:cd10430   37 NIGGLLTGLLSLGLSLWLAFTPSTGKNEPKrLGLLLGFAFLTGASLGPLLDLVIAINPSIIVTAFLGTAVIFACFSLAAL 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 232 CAPSDKFLYMGGPLAIGLGVVFASSLASMWLPpttalGAGLASMSLYGGLVLFSGFLLYDTQRMVRRAEvypqysYTPYD 311
Cdd:cd10430  117 LAKRREYLYLGGLLSSALSILLLVSLANIFGG-----SKFLFQAELYLGLLVFCGFVLFDTQMIIEKAE------NGDRD 185
                        170       180
                 ....*....|....*....|...
gi 665390678 312 PINASMSIYMDVLNIFIRIVTIL 334
Cdd:cd10430  186 YIWHALDLFVDFVALFRRLLIIL 208
GAAP_like cd10429
Golgi antiapoptotic protein; GAAP (or transmembrane BAX inhibitor motif containing 4) is a ...
197-338 1.18e-15

Golgi antiapoptotic protein; GAAP (or transmembrane BAX inhibitor motif containing 4) is a regulator of apoptosis that is related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Human GAAP has been linked to the modulation of intracellular fluxes of Ca(2+), by suppressing influx from the extracellular medium and reducing release from intracellular stores. A viral homolog (vaccinia virus vGAAP) acts similar to its human counterpart in inhibiting apoptosis.


Pssm-ID: 198411  Cd Length: 233  Bit Score: 74.95  E-value: 1.18e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 197 LGAVIApicFMGGPILTRAALYTGGIVGGLsTIAACAPSDKFLYMGGPLAIGLGVVFASSLASMWLP--PTTALgaglas 274
Cdd:cd10429  108 VGLVVS---FYDGKIVLQALILTLGVFVGL-TAYTFQTKRDFSSFGALLFILLWALILLALIFQFFPysPTFEL------ 177
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 665390678 275 msLYGGL--VLFSGFLLYDTQRMVRRaevypqysYTPYDPINASMSIYMDVLNIFIRIVTILSGGQ 338
Cdd:cd10429  178 --VYAGLgaLLFSGYIVYDTQLIMKR--------LSPDEYILAAISLYLDIINLFLSILRILAAMN 233
BI-1-like_bacterial cd10432
Bacterial BAX inhibitor (BI)-1/YccA-like proteins; This family is comprised of bacterial ...
121-334 3.51e-13

Bacterial BAX inhibitor (BI)-1/YccA-like proteins; This family is comprised of bacterial relatives of the mammalian members of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. In plants, BI-1 like proteins play a role in pathogen resistance. A characterized prokaryotic member, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.


Pssm-ID: 198414  Cd Length: 211  Bit Score: 67.59  E-value: 3.51e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 121 IQSTYAFFGGSCVLTAAAAAATFRSHRLLELASRG-GILATIASLALVIGSGAVARsieyQPGLGAKHLAWAVHCAILGA 199
Cdd:cd10432    6 MKKVYGLMAAGLLLTAVGAYVGASTPALLLIAGSPlMWVLLIAELALVFGLSFRIN----KMSVATALPLFFAFAALTGL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 200 VIAPICFM-GGPILTRAALYTGGIVGGLSTIAACAPSDkFLYMGGPLAIGLGVVFASSLASMWLPPTtALGAGLAsmslY 278
Cdd:cd10432   82 TLSPILLVyTGASIAQAFFTTAATFGGLSLYGYTTKKD-LSFLGSFLFMGLIGLIIASLVNIFLQSS-ALQFAIS----A 155
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 665390678 279 GGLVLFSGFLLYDTQRMVRRAEVYPQYSYTPyDPINASMSIYMDVLNIFIRIVTIL 334
Cdd:cd10432  156 IGVLIFSGLIAYDTQRIKRMYEAGGGESGYK-DAIMGALSLYLDFINLFLFLLRLF 210
YccA_like cd10433
YccA-like proteins; A prokaryotic member of the BAX inhibitor (BI)-1 like family of small ...
197-337 1.87e-09

YccA-like proteins; A prokaryotic member of the BAX inhibitor (BI)-1 like family of small transmembrane proteins, Escherichia coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.


Pssm-ID: 198415  Cd Length: 205  Bit Score: 56.82  E-value: 1.87e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 197 LGAVIAPICFM------GGPILTRAALYTGGIVGGLSTIAACAPSDkFLYMGGPLAIGLGVVFASSLASMWLppttalGA 270
Cdd:cd10433   72 MGYTLGPILNMylalpnGGQIIMTALGGTAAIFFGLSAYALTTKKD-FSFLGGFLFVGAIVLLLAAVANIFL------QI 144
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 665390678 271 GLASMSLYGGLVLF-SGFLLYDTQRMVRRAEvypqysyTPYdpINASMSIYMDVLNIFIRIVTILSGG 337
Cdd:cd10433  145 PALSLAISAAFVLFsSGFILYDTSRIIHGGE-------TNY--IMATVSLYVSIYNLFVSLLNLLGAF 203
LFG_like cd10428
Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; ...
215-334 5.74e-08

Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis; Lifeguard (LFG) inhibits Fas-mediated apoptosis and interacts with the death receptor FasR/CD95/Apo1. LFG has been shown to interact with Bax and is supposed to be integral to cellular membranes such as the ER. A close homolog, PP1201 or RECS1, appears located in the Golgi compartment and also interacts with the Fas receptor CD95/Apo1. PP1201 is expressed in response to shear stress.


Pssm-ID: 198410  Cd Length: 217  Bit Score: 52.54  E-value: 5.74e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665390678 215 AALYTGGIVGGLSTIAACAPSDkFLYMGGPLAIGLGVVFASSLASMWLPPTTAlgaglasMSLYGGL--VLFSGFLLYDT 292
Cdd:cd10428  107 AVGITAVVCLGLTLFAFQTKYD-FTSCGGVLFVLSIVLLIFGIVAIFFYVKWL-------HIVYASLgaLLFSLYLAVDT 178
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 665390678 293 QRMVRRAevypQYSYTPYDPINASMSIYMDVLNIFIRIVTIL 334
Cdd:cd10428  179 QLLMGGR----KYELSPEEYIFAALNIYVDIVNIFLYILQLI 216
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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