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Conserved domains on  [gi|665392241|ref|NP_001285405|]
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uncharacterized protein Dmel_CG15043, isoform B [Drosophila melanogaster]

Protein Classification

MBF2 family protein( domain architecture ID 11239491)

MBF2 family protein similar to Samia cynthia transcriptional coactivator MBF2 that activates transcription via its interaction with TFIIA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MBF2 pfam15868
Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In ...
 74-161 3.55e-21

Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In Bombyx mori, it has been found to form a complex with MBF1 and the DNA-binding regulator FTZ-F1.


:

Pssm-ID: 464913  Cd Length: 90  Bit Score: 82.27  E-value: 3.55e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665392241   74 GARIPGDELVAQTANTYEFPRAQDVSLQLTYPENGKGATVSYVELLC-TQDTNEGTAYVVAGGIGQSLISIVLEAKNTKN 152
Cdd:pfam15868   2 GERQPGDRLLYRETIVKSPSWLRVVTVTITYPASGTGETITYIEVLDqFTNGSGATAYLTSGGVGQNFVTIRLKSQRGRG 81


                  ....*....
gi 665392241  153 FSYQALYYG 161
Cdd:pfam15868  82 FNFTVEIYG 90
 
Name Accession Description Interval E-value
MBF2 pfam15868
Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In ...
 74-161 3.55e-21

Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In Bombyx mori, it has been found to form a complex with MBF1 and the DNA-binding regulator FTZ-F1.


Pssm-ID: 464913  Cd Length: 90  Bit Score: 82.27  E-value: 3.55e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665392241   74 GARIPGDELVAQTANTYEFPRAQDVSLQLTYPENGKGATVSYVELLC-TQDTNEGTAYVVAGGIGQSLISIVLEAKNTKN 152
Cdd:pfam15868   2 GERQPGDRLLYRETIVKSPSWLRVVTVTITYPASGTGETITYIEVLDqFTNGSGATAYLTSGGVGQNFVTIRLKSQRGRG 81


                  ....*....
gi 665392241  153 FSYQALYYG 161
Cdd:pfam15868  82 FNFTVEIYG 90
 
Name Accession Description Interval E-value
MBF2 pfam15868
Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In ...
 74-161 3.55e-21

Transcription activator MBF2; MBF2 activates transcription via its interaction with TFIIA. In Bombyx mori, it has been found to form a complex with MBF1 and the DNA-binding regulator FTZ-F1.


Pssm-ID: 464913  Cd Length: 90  Bit Score: 82.27  E-value: 3.55e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665392241   74 GARIPGDELVAQTANTYEFPRAQDVSLQLTYPENGKGATVSYVELLC-TQDTNEGTAYVVAGGIGQSLISIVLEAKNTKN 152
Cdd:pfam15868   2 GERQPGDRLLYRETIVKSPSWLRVVTVTITYPASGTGETITYIEVLDqFTNGSGATAYLTSGGVGQNFVTIRLKSQRGRG 81


                  ....*....
gi 665392241  153 FSYQALYYG 161
Cdd:pfam15868  82 FNFTVEIYG 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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