NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|665402046|ref|NP_001286600|]
View 

uncharacterized protein Dmel_CG15117, isoform E [Drosophila melanogaster]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Bgal_small_N super family cl46900
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
1-601 0e+00

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


The actual alignment was detected with superfamily member PRK10150:

Pssm-ID: 481240 [Multi-domain]  Cd Length: 604  Bit Score: 704.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   1 MLYPRESETREVRSLDGIWNFvRSDQANPtqGVRDEWYAKELSKSRPtipMPVPASYNDITTD-NLRDHVGTVWYDRKFF 79
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAF-KLDRENC--GIDQRWWESALPESRA---MAVPGSFNDQFADaDIRNYVGDVWYQREVF 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  80 VPRSWsKDQRIWLRFGSVHYEAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGAENRITVMCDNALIQTTVPQGRITEvpn 159
Cdd:PRK10150  75 IPKGW-AGQRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVRITVCVNNELNWQTLPPGNVIE--- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 160 DGGMTIVQSYTFDFFNYAGIHRSVHLYTTPRTFIEEVEVTTNLSKDATVGEVFYSVSVNGsaaneadNVLQIQANLYDKD 239
Cdd:PRK10150 151 DGNGKKKQKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLNHASVDWSVETNG-------DVDSVSVTLRDAD 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 240 GILVANATSDQklgGKLQVNPVKPWwpylmhsEPG--YLYQLEIKLLAtNDELLDVYRLKVGIRTLSWNSQQFLINGKPV 317
Cdd:PRK10150 224 GQVVATGQGTS---GTLQVVNPHLW-------QPGegYLYTLCVELAK-SGTECDTYPLRFGIRSVAVKGGQFLINGKPF 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 318 YFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFADEHGIMIIDECPSV------------- 384
Cdd:PRK10150 293 YFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVglnlsfgagleag 372
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 385 --DTENFSQELLGK-----HKSSLEQLIHRDRNHPSVVMWSIANEPRTGSVSADSYFELVANFTRSLDKTRPITAAIAVS 457
Cdd:PRK10150 373 nkPKETYSEEAVNGetqqaHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTCVNVMF 452
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 458 NT--QDKAGRSLDIISFNRYNAWYSNAGRLDMITQNVIDEAIAWNKRYNKPIIMSEYGADTLEGLHMQPAYVWSEEFQTE 535
Cdd:PRK10150 453 ATpdTDTVSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQCA 532
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 665402046 536 VFSRHFKAFDELRKkgwFIGEFVWNFADFKTAQSYTRVGGNKKGVFTRARQPKAAAHLLRKRYFAL 601
Cdd:PRK10150 533 FLDMYHRVFDRVPA---VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGI 595
 
Name Accession Description Interval E-value
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
1-601 0e+00

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 704.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   1 MLYPRESETREVRSLDGIWNFvRSDQANPtqGVRDEWYAKELSKSRPtipMPVPASYNDITTD-NLRDHVGTVWYDRKFF 79
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAF-KLDRENC--GIDQRWWESALPESRA---MAVPGSFNDQFADaDIRNYVGDVWYQREVF 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  80 VPRSWsKDQRIWLRFGSVHYEAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGAENRITVMCDNALIQTTVPQGRITEvpn 159
Cdd:PRK10150  75 IPKGW-AGQRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVRITVCVNNELNWQTLPPGNVIE--- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 160 DGGMTIVQSYTFDFFNYAGIHRSVHLYTTPRTFIEEVEVTTNLSKDATVGEVFYSVSVNGsaaneadNVLQIQANLYDKD 239
Cdd:PRK10150 151 DGNGKKKQKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLNHASVDWSVETNG-------DVDSVSVTLRDAD 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 240 GILVANATSDQklgGKLQVNPVKPWwpylmhsEPG--YLYQLEIKLLAtNDELLDVYRLKVGIRTLSWNSQQFLINGKPV 317
Cdd:PRK10150 224 GQVVATGQGTS---GTLQVVNPHLW-------QPGegYLYTLCVELAK-SGTECDTYPLRFGIRSVAVKGGQFLINGKPF 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 318 YFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFADEHGIMIIDECPSV------------- 384
Cdd:PRK10150 293 YFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVglnlsfgagleag 372
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 385 --DTENFSQELLGK-----HKSSLEQLIHRDRNHPSVVMWSIANEPRTGSVSADSYFELVANFTRSLDKTRPITAAIAVS 457
Cdd:PRK10150 373 nkPKETYSEEAVNGetqqaHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTCVNVMF 452
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 458 NT--QDKAGRSLDIISFNRYNAWYSNAGRLDMITQNVIDEAIAWNKRYNKPIIMSEYGADTLEGLHMQPAYVWSEEFQTE 535
Cdd:PRK10150 453 ATpdTDTVSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQCA 532
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 665402046 536 VFSRHFKAFDELRKkgwFIGEFVWNFADFKTAQSYTRVGGNKKGVFTRARQPKAAAHLLRKRYFAL 601
Cdd:PRK10150 533 FLDMYHRVFDRVPA---VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGI 595
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
17-598 2.10e-118

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 366.01  E-value: 2.10e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  17 GIWNFVRSDQANPTQGVRD--EWyakelsksrptIPMPVPASYNDITTDNL-------RDHVGTVWYDRKFFVPRSWsKD 87
Cdd:COG3250    1 GGWKFRLGDAPEGAKPDFDdsGW-----------DPITVPGDWELDLYGLPdpfvgpwYLYNGVGWYRRTFTVPASW-KG 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  88 QRIWLRFGSVHYEAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGaENRITVMCDNaliqttvpqgritevPNDGGMTIVQ 167
Cdd:COG3250   69 KRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPG-ENVLAVRVDN---------------PSDGSYLEGQ 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 168 sytfDFFNYAGIHRSVHLYTTPRTFIEEVEVTTNLS-KDATVgevfysvSVNGSAANEADNVLQIQANLYDKDGILVANA 246
Cdd:COG3250  133 ----DWWRTSGIYRDVWLEATPKVHIEDVFVTPDLDdGSATL-------TVEVELENESDAGVTVEVTLLDADGKVVATA 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 247 TSDQKLGG--------KLQVNPVKPWWPylmhsEPGYLYQLEIKLLAtNDELLDVYRLKVGIRTLSW-NSQQFLINGKPV 317
Cdd:COG3250  202 TAKVTLAAgeentvtlTLTVPNPKLWSP-----EDPNLYTLVVTLKD-DGKVVDTVSTRFGFRTIEIdGDGGFLLNGKPV 275
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 318 YFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFADEHGIMIIDECP--SVDTENFSQELLG 395
Cdd:COG3250  276 FLKGVNRHEDWPDDGRAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPfeWHGMLGDDPEFLE 355
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 396 KHKSSLEQLIHRDRNHPSVVMWSIANEPRTGSVSADSYfelvaNFTRSLDKTRPItaaiavsntqdkagrsldiisfnry 475
Cdd:COG3250  356 AVEAELREMVRRDRNHPSIILWSGGNESGGGPNFAALY-----EWVKELDPTRPV------------------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 476 nawysnagrldmitqnvideaiawnkrynkpIIMSEYGAD---TLEGLHMQPAyvWSEEFQTEVFSRHfkAFDELRKKGW 552
Cdd:COG3250  406 -------------------------------RFLSEYGHAmpnSLGGGYHQPS--DFEEYQALQALEE--YWEAFRRRPR 450
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|....*..
gi 665402046 553 FIGEFVWNFADFKTAQSYTRVGGNKKGVFT-RARQPKAAAHLLRKRY 598
Cdd:COG3250  451 LAGGFIWQLNDYWPEPRDNDGNFCSWGLVDyYDRTPKPAYYEVKSAW 497
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
309-598 1.76e-83

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 263.92  E-value: 1.76e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  309 QFLINGKPVYFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFADEHGIMIIDECPsVDTEN 388
Cdd:pfam02836   7 LFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN-LETHG 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  389 FSQ----------------ELLGKHKSSLEQLIHRDRNHPSVVMWSIANEPrtgsvSADSYFELVANFTRSLDKTRPITa 452
Cdd:pfam02836  86 LWQkfgeiepsyseltdnpEWLPAHLERAEELVQRDKNHPSVIIWSLGNES-----GAGENIAAMYAATKSLDPTRPVH- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  453 aiAVSNTQDkagRSLDIISFNRYNAWYSNAGRLDMITQNVIDeaiaWNKRYNKPIIMSEYGADTL--EGLHMQPAYVWS- 529
Cdd:pfam02836 160 --YEGVGID---PEVDDIILDIYSRMYEDYGHPEVIEKYLED----WYKKPQKPIIICEYGHAMGnsPGGLQEYQDLFYk 230
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  530 -EEFQTEVFSRHFKAFDELRKKgWFIGEFVWNFADFKTAQSYTRVGGNkkGVFTRARQPKAAAHLLRKRY 598
Cdd:pfam02836 231 yPEYQGGFIWDWHDQGIQKRDP-NVGGEWYWYGGDFGDRPSDYRFCGN--GLFFADRTPKPALFELKKRY 297
GalB NF041463
beta-galactosidase GalB;
70-473 3.21e-35

beta-galactosidase GalB;


Pssm-ID: 469351 [Multi-domain]  Cd Length: 799  Bit Score: 141.97  E-value: 3.21e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  70 GTVWYDRKFFVPRSwSKDQRIWLRF-GSVHYeAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGAENRITVMCDNaliqtt 148
Cdd:NF041463  64 GVAWYRKKLDIPAS-DAGKSIFLDIdGAMSY-AMVWLNGQLVGGWPYGYNSWRLDLTPYLKPGGENQLAIRLDN------ 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 149 vpqgritevPND------GGmtivqsytfdffnyaGIHRSVHLYTTPRTFIEE--VEVTT-NLSKD-ATVGevfYSVSVN 218
Cdd:NF041463 136 ---------PPEssrwypGG---------------GLYRNVWLTKTNPVHVAQwgTFVTTpEVSADsATVD---LAVTVD 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 219 GSAANEADnvLQIQANLYDKD------GILVA---------NATSDQKLGGKLQVNPVKPWWPYLMHsEPgYLYQLEIKL 283
Cdd:NF041463 189 NDSAADAD--VEVSTEIYALDadgkrtGKAVArfapasltvAAGESATVSGSLTIANPRLWGPPPTQ-TP-NRYVAVTTV 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 284 LAtNDELLDVYRLKVGIRTLSWNSQQ-FLINGKPVYFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPY 362
Cdd:NF041463 265 YQ-GGKVVDRYETPFGIRSLRFDPDRgVLVNGEHIRLQGVNQHHDLGALGAAFNVRAAERQLEILREMGCNAIRMAHNPP 343
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 363 SEESMQFADEHGIMIIDEcpSVD------TEN-FSQELLGKHKSSLEQLIHRDRNHPSVVMWSIANEPR---TGSVSADS 432
Cdd:NF041463 344 APELLELTDRMGFLVVDE--IFDswerkkTPLdFHLIFPDWHEQDLRAMIRRDRNHPSVIMWSIGNEVGeqyTGEAGAAI 421
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 665402046 433 YFELVAnFTRSLDKTRPITAAIAVSntqdKAG----RSLDIISFN 473
Cdd:NF041463 422 ARRLHD-IVKEEDPTRPTTASMNYA----KPDmpfpAVMDVISLN 461
GH113_mannanase-like cd19608
Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins; Mannan endo-1,4-beta ...
465-598 8.36e-03

Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins; Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.


Pssm-ID: 381626  Cd Length: 310  Bit Score: 38.51  E-value: 8.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 465 RSLDIISFNRY----NAWYSNAGRLDMITQNVIDEAIAWNKRYNKPIIMSEYGADTLEGLHMQPayvWSEEFQTEVFS-- 538
Cdd:cd19608  178 DALDYIGVDAYfpltDKPTPSVEELAAGWQPILDQLEALADKYGKPVLFTEIGYPSVDGAAAEP---WDWPGASGPVDlq 254
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 665402046 539 ---RHFKA-FDELRKKGWFIGEFVWNFADFKTAQSYTRVGgnkkgvFTraRQPKAAAHLLRKRY 598
Cdd:cd19608  255 eqaNAYEAfFRAFWDRPWFAGVFWWGWDPDPDPGGPGDTG------YS--PQGKPAEDVIRRWF 310
 
Name Accession Description Interval E-value
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
1-601 0e+00

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 704.07  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   1 MLYPRESETREVRSLDGIWNFvRSDQANPtqGVRDEWYAKELSKSRPtipMPVPASYNDITTD-NLRDHVGTVWYDRKFF 79
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAF-KLDRENC--GIDQRWWESALPESRA---MAVPGSFNDQFADaDIRNYVGDVWYQREVF 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  80 VPRSWsKDQRIWLRFGSVHYEAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGAENRITVMCDNALIQTTVPQGRITEvpn 159
Cdd:PRK10150  75 IPKGW-AGQRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVRITVCVNNELNWQTLPPGNVIE--- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 160 DGGMTIVQSYTFDFFNYAGIHRSVHLYTTPRTFIEEVEVTTNLSKDATVGEVFYSVSVNGsaaneadNVLQIQANLYDKD 239
Cdd:PRK10150 151 DGNGKKKQKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLNHASVDWSVETNG-------DVDSVSVTLRDAD 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 240 GILVANATSDQklgGKLQVNPVKPWwpylmhsEPG--YLYQLEIKLLAtNDELLDVYRLKVGIRTLSWNSQQFLINGKPV 317
Cdd:PRK10150 224 GQVVATGQGTS---GTLQVVNPHLW-------QPGegYLYTLCVELAK-SGTECDTYPLRFGIRSVAVKGGQFLINGKPF 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 318 YFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFADEHGIMIIDECPSV------------- 384
Cdd:PRK10150 293 YFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVglnlsfgagleag 372
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 385 --DTENFSQELLGK-----HKSSLEQLIHRDRNHPSVVMWSIANEPRTGSVSADSYFELVANFTRSLDKTRPITAAIAVS 457
Cdd:PRK10150 373 nkPKETYSEEAVNGetqqaHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTCVNVMF 452
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 458 NT--QDKAGRSLDIISFNRYNAWYSNAGRLDMITQNVIDEAIAWNKRYNKPIIMSEYGADTLEGLHMQPAYVWSEEFQTE 535
Cdd:PRK10150 453 ATpdTDTVSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSEEYQCA 532
                        570       580       590       600       610       620
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 665402046 536 VFSRHFKAFDELRKkgwFIGEFVWNFADFKTAQSYTRVGGNKKGVFTRARQPKAAAHLLRKRYFAL 601
Cdd:PRK10150 533 FLDMYHRVFDRVPA---VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGI 595
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
17-598 2.10e-118

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 366.01  E-value: 2.10e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  17 GIWNFVRSDQANPTQGVRD--EWyakelsksrptIPMPVPASYNDITTDNL-------RDHVGTVWYDRKFFVPRSWsKD 87
Cdd:COG3250    1 GGWKFRLGDAPEGAKPDFDdsGW-----------DPITVPGDWELDLYGLPdpfvgpwYLYNGVGWYRRTFTVPASW-KG 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  88 QRIWLRFGSVHYEAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGaENRITVMCDNaliqttvpqgritevPNDGGMTIVQ 167
Cdd:COG3250   69 KRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPG-ENVLAVRVDN---------------PSDGSYLEGQ 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 168 sytfDFFNYAGIHRSVHLYTTPRTFIEEVEVTTNLS-KDATVgevfysvSVNGSAANEADNVLQIQANLYDKDGILVANA 246
Cdd:COG3250  133 ----DWWRTSGIYRDVWLEATPKVHIEDVFVTPDLDdGSATL-------TVEVELENESDAGVTVEVTLLDADGKVVATA 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 247 TSDQKLGG--------KLQVNPVKPWWPylmhsEPGYLYQLEIKLLAtNDELLDVYRLKVGIRTLSW-NSQQFLINGKPV 317
Cdd:COG3250  202 TAKVTLAAgeentvtlTLTVPNPKLWSP-----EDPNLYTLVVTLKD-DGKVVDTVSTRFGFRTIEIdGDGGFLLNGKPV 275
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 318 YFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFADEHGIMIIDECP--SVDTENFSQELLG 395
Cdd:COG3250  276 FLKGVNRHEDWPDDGRAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPfeWHGMLGDDPEFLE 355
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 396 KHKSSLEQLIHRDRNHPSVVMWSIANEPRTGSVSADSYfelvaNFTRSLDKTRPItaaiavsntqdkagrsldiisfnry 475
Cdd:COG3250  356 AVEAELREMVRRDRNHPSIILWSGGNESGGGPNFAALY-----EWVKELDPTRPV------------------------- 405
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 476 nawysnagrldmitqnvideaiawnkrynkpIIMSEYGAD---TLEGLHMQPAyvWSEEFQTEVFSRHfkAFDELRKKGW 552
Cdd:COG3250  406 -------------------------------RFLSEYGHAmpnSLGGGYHQPS--DFEEYQALQALEE--YWEAFRRRPR 450
                        570       580       590       600
                 ....*....|....*....|....*....|....*....|....*..
gi 665402046 553 FIGEFVWNFADFKTAQSYTRVGGNKKGVFT-RARQPKAAAHLLRKRY 598
Cdd:COG3250  451 LAGGFIWQLNDYWPEPRDNDGNFCSWGLVDyYDRTPKPAYYEVKSAW 497
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
309-598 1.76e-83

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 263.92  E-value: 1.76e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  309 QFLINGKPVYFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFADEHGIMIIDECPsVDTEN 388
Cdd:pfam02836   7 LFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN-LETHG 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  389 FSQ----------------ELLGKHKSSLEQLIHRDRNHPSVVMWSIANEPrtgsvSADSYFELVANFTRSLDKTRPITa 452
Cdd:pfam02836  86 LWQkfgeiepsyseltdnpEWLPAHLERAEELVQRDKNHPSVIIWSLGNES-----GAGENIAAMYAATKSLDPTRPVH- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  453 aiAVSNTQDkagRSLDIISFNRYNAWYSNAGRLDMITQNVIDeaiaWNKRYNKPIIMSEYGADTL--EGLHMQPAYVWS- 529
Cdd:pfam02836 160 --YEGVGID---PEVDDIILDIYSRMYEDYGHPEVIEKYLED----WYKKPQKPIIICEYGHAMGnsPGGLQEYQDLFYk 230
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  530 -EEFQTEVFSRHFKAFDELRKKgWFIGEFVWNFADFKTAQSYTRVGGNkkGVFTRARQPKAAAHLLRKRY 598
Cdd:pfam02836 231 yPEYQGGFIWDWHDQGIQKRDP-NVGGEWYWYGGDFGDRPSDYRFCGN--GLFFADRTPKPALFELKKRY 297
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
35-576 2.00e-44

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 170.63  E-value: 2.00e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   35 DEWYakelsksrptiPMPVPASYndITTDNlrdhvGTVWYDRKFFVPRSWsKDQRIWLRFGSVHYEAYVWINGQKVVKHE 114
Cdd:PRK10340   92 DEGF-----------PFPIDVPF--VPSDN-----PTGAYQRTFTLSDGW-QGKQTIIKFDGVETYFEVYVNGQYVGFSK 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  115 MGHLPFEAEVTDLLSYGaENRITVmcdnaliqtTVPQGritevpNDGGMTIVQsytfDFFNYAGIHRSVHLYTTPRTFIE 194
Cdd:PRK10340  153 GSRLTAEFDISAMVKTG-DNLLCV---------RVMQW------ADSTYLEDQ----DMWWLAGIFRDVYLVGKPLTHIN 212
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  195 EVEVTTNLSKDATVGEVFYSVSVNGSAANEADNvlQIQANLYDKDGILVANATSDQKLGGKLQVNP-VKPWWPYLMHSEP 273
Cdd:PRK10340  213 DFTVRTDFDEDYCDATLSCEVVLENLAASPVVT--TLEYTLFDGERVVHSSAIDHLAIEKLTSASFaFTVEQPQQWSAES 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  274 GYLYQLEIKLLATNDELLDVYRLKVGIRTLSWNSQQFLINGKPVYFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGAN 353
Cdd:PRK10340  291 PYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNIN 370
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  354 AYRTSHYPYSEESMQFADEHGIMIIDECpsvDTENFSQELLGKHK-------------SSLEQLIHRDRNHPSVVMWSIA 420
Cdd:PRK10340  371 SVRTAHYPNDPRFYELCDIYGLFVMAET---DVESHGFANVGDISritddpqwekvyvDRIVRHIHAQKNHPSIIIWSLG 447
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  421 NEPRTGsvsadSYFELVANFTRSLDKTRpitaaiAVSNTQDKAGRSLDIISfnrynAWYSNAGRLDMITQNvideaiawn 500
Cdd:PRK10340  448 NESGYG-----CNIRAMYHAAKALDDTR------LVHYEEDRDAEVVDVIS-----TMYTRVELMNEFGEY--------- 502
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  501 kRYNKPIIMSEYGADTLEGlhmqPAYVwsEEFQtEVFSRHfkafDELRkkgwfiGEFVWNFADF------KTAQSYTRVG 574
Cdd:PRK10340  503 -PHPKPRILCEYAHAMGNG----PGGL--TEYQ-NVFYKH----DCIQ------GHYVWEWCDHgiqaqdDNGNVWYKYG 564

                  ..
gi 665402046  575 GN 576
Cdd:PRK10340  565 GD 566
lacZ PRK09525
beta-galactosidase;
12-450 1.11e-39

beta-galactosidase;


Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 156.24  E-value: 1.11e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   12 VRSLDGIWNFvrSDQANPTQgVRDEWYAKELSKSRPtipMPVPAS----------YNDIT-----------TDNlrdhvG 70
Cdd:PRK09525   52 RQSLNGEWRF--SYFPAPEA-VPESWLECDLPDADT---IPVPSNwqlhgydapiYTNVTypipvnppfvpEEN-----P 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   71 TVWYDRKFFVPRSWSKDQRIWLRFGSVHYEAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGaENRITVM----CDNaliq 146
Cdd:PRK09525  121 TGCYSLTFTVDESWLQSGQTRIIFDGVNSAFHLWCNGRWVGYSQDSRLPAEFDLSPFLRAG-ENRLAVMvlrwSDG---- 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  147 ttvpqgritevpndggmtivqSY--TFDFFNYAGIHRSVHLYTTPRTFIEEVEVTTNLSKDATVGEVFYSVSVNGSAANE 224
Cdd:PRK09525  196 ---------------------SYleDQDMWRMSGIFRDVSLLHKPTTQLSDFHITTELDDDFRRAVLEVEAQVNGELRDE 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  225 adnvLQIQANLYDkDGILVANATS-------------DQKLGGKLQVNPvkpwwPYLMHSEPGYLYQLEIKLLATNDELL 291
Cdd:PRK09525  255 ----LRVTVQLWD-GETLVASGTApfgteiidergayADRVTLRLNVEN-----PKLWSAETPNLYRAVVSLLDADGTLI 324
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  292 DVYRLKVGIRTLSWNSQQFLINGKPVYFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPYSEESMQFAD 371
Cdd:PRK09525  325 EAEAYDVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLWYELCD 404
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  372 EHGIMIIDECpSVDTEN----------------FSQEllgkhkssLEQLIHRDRNHPSVVMWSIANEPRTGSVSADSYfe 435
Cdd:PRK09525  405 RYGLYVVDEA-NIETHGmvpmnrlsddprwlpaMSER--------VTRMVQRDRNHPSIIIWSLGNESGHGANHDALY-- 473
                         490
                  ....*....|....*
gi 665402046  436 lvaNFTRSLDKTRPI 450
Cdd:PRK09525  474 ---RWIKSNDPSRPV 485
GalB NF041463
beta-galactosidase GalB;
70-473 3.21e-35

beta-galactosidase GalB;


Pssm-ID: 469351 [Multi-domain]  Cd Length: 799  Bit Score: 141.97  E-value: 3.21e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  70 GTVWYDRKFFVPRSwSKDQRIWLRF-GSVHYeAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGAENRITVMCDNaliqtt 148
Cdd:NF041463  64 GVAWYRKKLDIPAS-DAGKSIFLDIdGAMSY-AMVWLNGQLVGGWPYGYNSWRLDLTPYLKPGGENQLAIRLDN------ 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 149 vpqgritevPND------GGmtivqsytfdffnyaGIHRSVHLYTTPRTFIEE--VEVTT-NLSKD-ATVGevfYSVSVN 218
Cdd:NF041463 136 ---------PPEssrwypGG---------------GLYRNVWLTKTNPVHVAQwgTFVTTpEVSADsATVD---LAVTVD 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 219 GSAANEADnvLQIQANLYDKD------GILVA---------NATSDQKLGGKLQVNPVKPWWPYLMHsEPgYLYQLEIKL 283
Cdd:NF041463 189 NDSAADAD--VEVSTEIYALDadgkrtGKAVArfapasltvAAGESATVSGSLTIANPRLWGPPPTQ-TP-NRYVAVTTV 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 284 LAtNDELLDVYRLKVGIRTLSWNSQQ-FLINGKPVYFRGFGRHEDSDIRGKGLDNALMVRDFNLLKWIGANAYRTSHYPY 362
Cdd:NF041463 265 YQ-GGKVVDRYETPFGIRSLRFDPDRgVLVNGEHIRLQGVNQHHDLGALGAAFNVRAAERQLEILREMGCNAIRMAHNPP 343
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 363 SEESMQFADEHGIMIIDEcpSVD------TEN-FSQELLGKHKSSLEQLIHRDRNHPSVVMWSIANEPR---TGSVSADS 432
Cdd:NF041463 344 APELLELTDRMGFLVVDE--IFDswerkkTPLdFHLIFPDWHEQDLRAMIRRDRNHPSVIMWSIGNEVGeqyTGEAGAAI 421
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 665402046 433 YFELVAnFTRSLDKTRPITAAIAVSntqdKAG----RSLDIISFN 473
Cdd:NF041463 422 ARRLHD-IVKEEDPTRPTTASMNYA----KPDmpfpAVMDVISLN 461
Glyco_hydro_2_N pfam02837
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ...
12-189 8.70e-27

Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.


Pssm-ID: 397120 [Multi-domain]  Cd Length: 169  Bit Score: 106.94  E-value: 8.70e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   12 VRSLDGIWNFVRSDQAnptQGVRDEWYAKELSKSRPtipMPVPASYN------------DITTDNLRDHVGTVWYDRKFF 79
Cdd:pfam02837   1 IKSLNGEWAFALFDAP---CGAPQSWWESALQESRT---IAVPSSWNdqpiytnveypiDFADPFIPTYNGTGWYQRTFF 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046   80 VPRSWsKDQRIWLRFGSVHYEAYVWINGQKVVKHEMGHLPFEAEVTDLLSYGaENRITVMCDNAliqttvpqgritevpN 159
Cdd:pfam02837  75 IPSKW-AGQRIRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYVIAG-KNRIAVKVLNW---------------S 137
                         170       180       190
                  ....*....|....*....|....*....|..
gi 665402046  160 DGGMTIVQS--YTFDFFNYAGIHRSVHLYTTP 189
Cdd:pfam02837 138 DG*YIEDQNgkYFHDFWNYSGIYRDVSLLTTP 169
Glyco_hydro_2 pfam00703
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and ...
191-301 5.85e-11

Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 395572 [Multi-domain]  Cd Length: 106  Bit Score: 59.80  E-value: 5.85e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  191 TFIEEVEVTTNLSKDATvGEVFYSVSVNGSAANEADnvLQIQANLYDKDGILVANATSDQKLGG----KLQVNPVKPWWP 266
Cdd:pfam00703   1 VHIEDVFITPDLDDDKT-AKVTVEVELENDGDASVE--VTLETEIKDADGKTVAAAAKVLVLGAgettELEVKNPKLWSP 77
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 665402046  267 ylmhsEPGYLYQLEIKLLAtNDELLDVYRLKVGIR 301
Cdd:pfam00703  78 -----ETPNLYTLTVELDK-DGKVIDEVSTRFGFR 106
COG3934 COG3934
Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism];
401-596 7.42e-11

Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism];


Pssm-ID: 443135 [Multi-domain]  Cd Length: 331  Bit Score: 63.83  E-value: 7.42e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 401 LEQLIHRDRNHPSVVMWSIANEPR--TGSVSADSYFELV---ANFTRSLDKTRPITAAI--------AVSNTQDKAGRSL 467
Cdd:COG3934  129 VRTLANRYKDDPAILGWELGNEPRnfGDPASPEAALAWLremAAAIKSLDPNHLVSSGDegdywevdDHPFVPAHAAPLI 208
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 468 DIISFNrynAWYSNAGRLDMITQnvIDEAIAWN---KRYNKPIIMSEYGADTLeglhmqpAYVWSEEFQTEVFSRhfkAF 544
Cdd:COG3934  209 DYLTVH---LYPFNWGWVDRPRS--TDKAAYLIelaRALGKPVVLEEFGAPRD-------SPQASEEDRAEFYRT---VL 273
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 665402046 545 DELRKKGWFIGEFVWNFADFKTAQSYTRVGGNKKGVFTRARQPKAAAHLLRK 596
Cdd:COG3934  274 EAALTLAGAAGANWWCFHDFDDLGDPPYEDQPLFGLFDSDGRPKPTAEVIRE 325
Cellulase pfam00150
Cellulase (glycosyl hydrolase family 5);
410-528 1.74e-03

Cellulase (glycosyl hydrolase family 5);


Pssm-ID: 395098 [Multi-domain]  Cd Length: 272  Bit Score: 40.82  E-value: 1.74e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046  410 NHPSVVMWSIANEPRTGSVSA-----DSYFELVANFTRSLDKTRPI-------TAAIAVSNTQDKAGRSLDIISFNRYNA 477
Cdd:pfam00150 118 GNNPNVIFELMNEPHGNDQATwaddvKDYAQEAIDAIRAAGPNNLIivggnswSQNPDGAALNDPNDDDNLIYSVHFYAP 197
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 665402046  478 WYSNAGRLDMITQNVIDEAIAWNKRY----NKPIIMSEYGADTLEGLHMQPAYVW 528
Cdd:pfam00150 198 SDFSGTWFDCEDPTNLAQRLRAAANWaldnGIPVFIGEFGGGNADGPCRDEAEKW 252
GH113_mannanase-like cd19608
Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins; Mannan endo-1,4-beta ...
465-598 8.36e-03

Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins; Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.


Pssm-ID: 381626  Cd Length: 310  Bit Score: 38.51  E-value: 8.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665402046 465 RSLDIISFNRY----NAWYSNAGRLDMITQNVIDEAIAWNKRYNKPIIMSEYGADTLEGLHMQPayvWSEEFQTEVFS-- 538
Cdd:cd19608  178 DALDYIGVDAYfpltDKPTPSVEELAAGWQPILDQLEALADKYGKPVLFTEIGYPSVDGAAAEP---WDWPGASGPVDlq 254
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 665402046 539 ---RHFKA-FDELRKKGWFIGEFVWNFADFKTAQSYTRVGgnkkgvFTraRQPKAAAHLLRKRY 598
Cdd:cd19608  255 eqaNAYEAfFRAFWDRPWFAGVFWWGWDPDPDPGGPGDTG------YS--PQGKPAEDVIRRWF 310
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH