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Conserved domains on  [gi|665410411|ref|NP_001287072|]
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comm3, isoform E [Drosophila melanogaster]

Protein Classification

Comm domain-containing protein( domain architecture ID 11240008)

Comm domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Comm pfam15957
Commissureless; Commissureless regulates Roundabout (Robo) levels and as a result regulates ...
 144-247 2.40e-55

Commissureless; Commissureless regulates Roundabout (Robo) levels and as a result regulates controls axon guidance across the embryo midline.


:

Pssm-ID: 374252  Cd Length: 110  Bit Score: 178.45  E-value: 2.40e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665410411  144 DFAHVVSDIWIGVILTLLIVFVIFFICACFVYHKFQQWKNSYRANHSDPTIEICRRCPPDYEAESLPSYTIVSGLPTYDD 223
Cdd:pfam15957   2 DYERFINDVWIGIVLTLLILSSVFCMCSCFLYHKFRTWKRSYRINHSGTTVEICRECPPPYEAESLPSYTIVSGLPSYDD 81

                          90       100
                  ....*....|....*....|....*...
gi 665410411  224 ALEEFRKAGI----ILTPAMVpiiKIFE 247
Cdd:pfam15957  82 ALEHFRKAGQygmsIVYPAVV---KIFE 106
 
Name Accession Description Interval E-value
Comm pfam15957
Commissureless; Commissureless regulates Roundabout (Robo) levels and as a result regulates ...
 144-247 2.40e-55

Commissureless; Commissureless regulates Roundabout (Robo) levels and as a result regulates controls axon guidance across the embryo midline.


Pssm-ID: 374252  Cd Length: 110  Bit Score: 178.45  E-value: 2.40e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665410411  144 DFAHVVSDIWIGVILTLLIVFVIFFICACFVYHKFQQWKNSYRANHSDPTIEICRRCPPDYEAESLPSYTIVSGLPTYDD 223
Cdd:pfam15957   2 DYERFINDVWIGIVLTLLILSSVFCMCSCFLYHKFRTWKRSYRINHSGTTVEICRECPPPYEAESLPSYTIVSGLPSYDD 81

                          90       100
                  ....*....|....*....|....*...
gi 665410411  224 ALEEFRKAGI----ILTPAMVpiiKIFE 247
Cdd:pfam15957  82 ALEHFRKAGQygmsIVYPAVV---KIFE 106
 
Name Accession Description Interval E-value
Comm pfam15957
Commissureless; Commissureless regulates Roundabout (Robo) levels and as a result regulates ...
 144-247 2.40e-55

Commissureless; Commissureless regulates Roundabout (Robo) levels and as a result regulates controls axon guidance across the embryo midline.


Pssm-ID: 374252  Cd Length: 110  Bit Score: 178.45  E-value: 2.40e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665410411  144 DFAHVVSDIWIGVILTLLIVFVIFFICACFVYHKFQQWKNSYRANHSDPTIEICRRCPPDYEAESLPSYTIVSGLPTYDD 223
Cdd:pfam15957   2 DYERFINDVWIGIVLTLLILSSVFCMCSCFLYHKFRTWKRSYRINHSGTTVEICRECPPPYEAESLPSYTIVSGLPSYDD 81

                          90       100
                  ....*....|....*....|....*...
gi 665410411  224 ALEEFRKAGI----ILTPAMVpiiKIFE 247
Cdd:pfam15957  82 ALEHFRKAGQygmsIVYPAVV---KIFE 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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