NCBI Conserved Domain Search

Conserved domains on [gi|665394185|ref|NP_001287350|]

View

Synapse-associated protein 47kD, isoform K [Drosophila melanogaster]

Protein Classification

BSD domain-containing protein( domain architecture ID 10654557)

BSD domain-containing protein similar to Homo sapiens BSD domain-containing protein 1 and synapse-associated protein 1

CATH: 1.10.3970.10

PubMed: 11943536

SCOP: 4001198

Graphical summary

Zoom to residue level

show extra options »

Show site features Horizontal zoom: ×

List of domain hits

Name

Accession

Description

Interval

E-value

BSD

smart00751

domain in transcription factors and synapse-associated proteins;

274-324

1.40e-14

domain in transcription factors and synapse-associated proteins;

Pssm-ID: 128990 [Multi-domain] Cd Length: 51 Bit Score: 67.21 E-value: 1.40e-14

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 665394185   274 FEFSYDTAYPTAIAIMAEDKALETMRFELVPKIITEENFWRNYFYRVSLII 324
Cdd:smart00751   1 NSFSLDAKKEEIESLLKENPLLKKLYNELVPKVLSEEEFWARYFYLLYKIK 51

Name

Accession

Description

Interval

E-value

BSD

smart00751

domain in transcription factors and synapse-associated proteins;

274-324

1.40e-14

domain in transcription factors and synapse-associated proteins;

Pssm-ID: 128990 [Multi-domain] Cd Length: 51 Bit Score: 67.21 E-value: 1.40e-14

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 665394185   274 FEFSYDTAYPTAIAIMAEDKALETMRFELVPKIITEENFWRNYFYRVSLII 324
Cdd:smart00751   1 NSFSLDAKKEEIESLLKENPLLKKLYNELVPKVLSEEEFWARYFYLLYKIK 51

BSD

pfam03909

BSD domain; This domain contains a distinctive -FW- motif. It is found in a family of ...

275-328

3.45e-13

BSD domain; This domain contains a distinctive -FW- motif. It is found in a family of eukaryotic transcription factors as well as a set of proteins of unknown function.

Pssm-ID: 461089 Cd Length: 55 Bit Score: 63.30 E-value: 3.45e-13

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 665394185  275 EFSYDTA-YPTAIAIMAEDKALETMRFELVPKIITEENFWRNYFYRVSLIIQAAE 328
Cdd:pfam03909   1 GFKLDEKtEEIAQLLLKEDPELRKLYEELVPSKVSEEEFWSRYFYLLRALKQEEE 55

Name

Accession

Description

Interval

E-value

BSD

smart00751

domain in transcription factors and synapse-associated proteins;

274-324

1.40e-14

domain in transcription factors and synapse-associated proteins;

Pssm-ID: 128990 [Multi-domain] Cd Length: 51 Bit Score: 67.21 E-value: 1.40e-14

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|.
gi 665394185   274 FEFSYDTAYPTAIAIMAEDKALETMRFELVPKIITEENFWRNYFYRVSLII 324
Cdd:smart00751   1 NSFSLDAKKEEIESLLKENPLLKKLYNELVPKVLSEEEFWARYFYLLYKIK 51

BSD

pfam03909

BSD domain; This domain contains a distinctive -FW- motif. It is found in a family of ...

275-328

3.45e-13

BSD domain; This domain contains a distinctive -FW- motif. It is found in a family of eukaryotic transcription factors as well as a set of proteins of unknown function.

Pssm-ID: 461089 Cd Length: 55 Bit Score: 63.30 E-value: 3.45e-13

                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 665394185  275 EFSYDTA-YPTAIAIMAEDKALETMRFELVPKIITEENFWRNYFYRVSLIIQAAE 328
Cdd:pfam03909   1 GFKLDEKtEEIAQLLLKEDPELRKLYEELVPSKVSEEEFWSRYFYLLRALKQEEE 55

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01