NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|665395066|ref|NP_001287525|]
View 

takeout, isoform B [Drosophila melanogaster]

Protein Classification

JHBP domain-containing protein( domain architecture ID 10534990)

JHBP (juvenile hormone-binding protein) domain-containing protein similar to Drosophila melanogaster protein takeout that participates in a novel circadian output pathway that conveys temporal and food status information to feeding-relevant metabolisms and activities

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
JHBP pfam06585
Haemolymph juvenile hormone binding protein (JHBP); This family consists of several ...
6-245 1.10e-71

Haemolymph juvenile hormone binding protein (JHBP); This family consists of several insect-specific haemolymph juvenile hormone binding proteins (JHBP). Juvenile hormone regulates embryogenesis, maintains the status quo of larval development and stimulates reproductive maturation in the adult insect. JH is transported from the sites of its synthesis to target tissues by a haemolymph carrier called juvenile hormone-binding protein (JHBP). JHBP protects the JH molecules from hydrolysis by non-specific esterases present in the insect haemolymph. The crystal structure of the JHBP from Galleria mellonella shows an unusual fold consisting of a long alpha-helix wrapped in a much curved antiparallel beta-sheet. The folding pattern for this structure closely resembles that found in some tandem-repeat mammalian lipid-binding and bactericidal permeability-increasing proteins, with a similar organization of the major cavity and a disulfide bond linking the long helix and the beta-sheet. It would appear that JHBP forms two cavities, only one of which, the one near the N- and C-termini, binds the hormone; binding induces a conformational change, of unknown significance. This family now includes DUF233, pfam03027.


:

Pssm-ID: 461956  Cd Length: 239  Bit Score: 219.00  E-value: 1.10e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066    6 FAVVLCLLVSVDAKFPEDPKPCKYGD---GECIMKLCNTLFSeNSAEGDPGLNLMQLDPLKVDRMVISQGesSSPVGITL 82
Cdd:pfam06585   1 LLLLLLAVAASAAELPSYIKKCKRSDpnlNKCLKEAIEALRP-QLAKGIPELGIPPLDPLVIDELSIDQG--SGPVGLKL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066   83 TFTDNLLYGIKDQRIVKVKGFGRDLtaKHEVKIVTKTFSLVGPYNIQGKVLILPISGTGQSNMTMVNVRAIVSFSGKPLV 162
Cdd:pfam06585  78 NLKNVKIYGLSNFTIKKVKVDLKDL--KIEFDLLFPKLRLEGKYKADGRILLLPINGKGDFNITLENLKAKGTLKGEPVE 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066  163 KNGETYLDVTDLKITMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKGVFSKLPYA 242
Cdd:pfam06585 156 KNGKTYLKITDLKVKFKVGDVKFHLDNLFNGNKELGDAINQFLNENWREVLNELKPAIEEALSEIFTDILNKIFSNVPYD 235

                  ...
gi 665395066  243 KFF 245
Cdd:pfam06585 236 ELF 238
 
Name Accession Description Interval E-value
JHBP pfam06585
Haemolymph juvenile hormone binding protein (JHBP); This family consists of several ...
6-245 1.10e-71

Haemolymph juvenile hormone binding protein (JHBP); This family consists of several insect-specific haemolymph juvenile hormone binding proteins (JHBP). Juvenile hormone regulates embryogenesis, maintains the status quo of larval development and stimulates reproductive maturation in the adult insect. JH is transported from the sites of its synthesis to target tissues by a haemolymph carrier called juvenile hormone-binding protein (JHBP). JHBP protects the JH molecules from hydrolysis by non-specific esterases present in the insect haemolymph. The crystal structure of the JHBP from Galleria mellonella shows an unusual fold consisting of a long alpha-helix wrapped in a much curved antiparallel beta-sheet. The folding pattern for this structure closely resembles that found in some tandem-repeat mammalian lipid-binding and bactericidal permeability-increasing proteins, with a similar organization of the major cavity and a disulfide bond linking the long helix and the beta-sheet. It would appear that JHBP forms two cavities, only one of which, the one near the N- and C-termini, binds the hormone; binding induces a conformational change, of unknown significance. This family now includes DUF233, pfam03027.


Pssm-ID: 461956  Cd Length: 239  Bit Score: 219.00  E-value: 1.10e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066    6 FAVVLCLLVSVDAKFPEDPKPCKYGD---GECIMKLCNTLFSeNSAEGDPGLNLMQLDPLKVDRMVISQGesSSPVGITL 82
Cdd:pfam06585   1 LLLLLLAVAASAAELPSYIKKCKRSDpnlNKCLKEAIEALRP-QLAKGIPELGIPPLDPLVIDELSIDQG--SGPVGLKL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066   83 TFTDNLLYGIKDQRIVKVKGFGRDLtaKHEVKIVTKTFSLVGPYNIQGKVLILPISGTGQSNMTMVNVRAIVSFSGKPLV 162
Cdd:pfam06585  78 NLKNVKIYGLSNFTIKKVKVDLKDL--KIEFDLLFPKLRLEGKYKADGRILLLPINGKGDFNITLENLKAKGTLKGEPVE 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066  163 KNGETYLDVTDLKITMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKGVFSKLPYA 242
Cdd:pfam06585 156 KNGKTYLKITDLKVKFKVGDVKFHLDNLFNGNKELGDAINQFLNENWREVLNELKPAIEEALSEIFTDILNKIFSNVPYD 235

                  ...
gi 665395066  243 KFF 245
Cdd:pfam06585 236 ELF 238
JHBP smart00700
Juvenile hormone binding protein domains in insects; The juvenile hormone exerts pleiotropic ...
18-246 3.83e-70

Juvenile hormone binding protein domains in insects; The juvenile hormone exerts pleiotropic functions during insect life cycles and its binding proteins regulate these functions.


Pssm-ID: 214779  Cd Length: 224  Bit Score: 214.85  E-value: 3.83e-70
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066    18 AKFPEDPKPCKYGD-GECIMKLCNTLFsENSAEGDPGLNLMQLDPLKVDRMVISQGesSSPVGITLTFTDNLLYGIKDQR 96
Cdd:smart00700   1 AEGPAFLKPCKLGDpSECLRDAIEALL-PQLKNGIPEYGIPPLDPLEIDDLKISID--SGVIGLRLTFKNVKIYGLSNFE 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066    97 IVKVKGFGRDLtaKHEVKIVTKTFSLVGPYNIQGKVLILPISGTGQSNMTMVNVRAIVSFSGKPLvKNGETYLDVTDLKI 176
Cdd:smart00700  78 ITKFKMDLKDK--KIELKIEFPKLNVKGDYKLDGRLLGLPLNGKGDANFTLENVKIRGTLKLKLG-PDGKTYLKIKSLKV 154
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066   177 TMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKGVFSKLPYAKFFA 246
Cdd:smart00700 155 NFEVGDVKSHLDNLFNGNKDLNDAINKFLNENWKALINELLPAIVEKLESIFLDLVNKVFAKVPIDEFFV 224
 
Name Accession Description Interval E-value
JHBP pfam06585
Haemolymph juvenile hormone binding protein (JHBP); This family consists of several ...
6-245 1.10e-71

Haemolymph juvenile hormone binding protein (JHBP); This family consists of several insect-specific haemolymph juvenile hormone binding proteins (JHBP). Juvenile hormone regulates embryogenesis, maintains the status quo of larval development and stimulates reproductive maturation in the adult insect. JH is transported from the sites of its synthesis to target tissues by a haemolymph carrier called juvenile hormone-binding protein (JHBP). JHBP protects the JH molecules from hydrolysis by non-specific esterases present in the insect haemolymph. The crystal structure of the JHBP from Galleria mellonella shows an unusual fold consisting of a long alpha-helix wrapped in a much curved antiparallel beta-sheet. The folding pattern for this structure closely resembles that found in some tandem-repeat mammalian lipid-binding and bactericidal permeability-increasing proteins, with a similar organization of the major cavity and a disulfide bond linking the long helix and the beta-sheet. It would appear that JHBP forms two cavities, only one of which, the one near the N- and C-termini, binds the hormone; binding induces a conformational change, of unknown significance. This family now includes DUF233, pfam03027.


Pssm-ID: 461956  Cd Length: 239  Bit Score: 219.00  E-value: 1.10e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066    6 FAVVLCLLVSVDAKFPEDPKPCKYGD---GECIMKLCNTLFSeNSAEGDPGLNLMQLDPLKVDRMVISQGesSSPVGITL 82
Cdd:pfam06585   1 LLLLLLAVAASAAELPSYIKKCKRSDpnlNKCLKEAIEALRP-QLAKGIPELGIPPLDPLVIDELSIDQG--SGPVGLKL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066   83 TFTDNLLYGIKDQRIVKVKGFGRDLtaKHEVKIVTKTFSLVGPYNIQGKVLILPISGTGQSNMTMVNVRAIVSFSGKPLV 162
Cdd:pfam06585  78 NLKNVKIYGLSNFTIKKVKVDLKDL--KIEFDLLFPKLRLEGKYKADGRILLLPINGKGDFNITLENLKAKGTLKGEPVE 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066  163 KNGETYLDVTDLKITMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKGVFSKLPYA 242
Cdd:pfam06585 156 KNGKTYLKITDLKVKFKVGDVKFHLDNLFNGNKELGDAINQFLNENWREVLNELKPAIEEALSEIFTDILNKIFSNVPYD 235

                  ...
gi 665395066  243 KFF 245
Cdd:pfam06585 236 ELF 238
JHBP smart00700
Juvenile hormone binding protein domains in insects; The juvenile hormone exerts pleiotropic ...
18-246 3.83e-70

Juvenile hormone binding protein domains in insects; The juvenile hormone exerts pleiotropic functions during insect life cycles and its binding proteins regulate these functions.


Pssm-ID: 214779  Cd Length: 224  Bit Score: 214.85  E-value: 3.83e-70
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066    18 AKFPEDPKPCKYGD-GECIMKLCNTLFsENSAEGDPGLNLMQLDPLKVDRMVISQGesSSPVGITLTFTDNLLYGIKDQR 96
Cdd:smart00700   1 AEGPAFLKPCKLGDpSECLRDAIEALL-PQLKNGIPEYGIPPLDPLEIDDLKISID--SGVIGLRLTFKNVKIYGLSNFE 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066    97 IVKVKGFGRDLtaKHEVKIVTKTFSLVGPYNIQGKVLILPISGTGQSNMTMVNVRAIVSFSGKPLvKNGETYLDVTDLKI 176
Cdd:smart00700  78 ITKFKMDLKDK--KIELKIEFPKLNVKGDYKLDGRLLGLPLNGKGDANFTLENVKIRGTLKLKLG-PDGKTYLKIKSLKV 154
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665395066   177 TMKPESSHYHFSNLFNGDKALGDNMNVFLNENSEAIYKETAKAIDRSFGKLYLGVVKGVFSKLPYAKFFA 246
Cdd:smart00700 155 NFEVGDVKSHLDNLFNGNKDLNDAINKFLNENWKALINELLPAIVEKLESIFLDLVNKVFAKVPIDEFFV 224
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH