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Conserved domains on  [gi|665505971|ref|NP_001287783|]
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dermcidin isoform 2 preproprotein [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Dermcidin pfam15291
Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to ...
 19-102 3.00e-50

Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to protect against pathogenic Gram-positive bacteria.


:

Pssm-ID: 405879  Cd Length: 84  Bit Score: 154.24  E-value: 3.00e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665505971   19 AYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGG 98
Cdd:pfam15291   1 AYDAEAASAPGSGNPCHEASAAQEENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVDGLEKLGKDAVDDLENTGKAG 80


                  ....
gi 665505971   99 EERL 102
Cdd:pfam15291  81 EERI 84
 
Name Accession Description Interval E-value
Dermcidin pfam15291
Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to ...
 19-102 3.00e-50

Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to protect against pathogenic Gram-positive bacteria.


Pssm-ID: 405879  Cd Length: 84  Bit Score: 154.24  E-value: 3.00e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665505971   19 AYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGG 98
Cdd:pfam15291   1 AYDAEAASAPGSGNPCHEASAAQEENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVDGLEKLGKDAVDDLENTGKAG 80


                  ....
gi 665505971   99 EERL 102
Cdd:pfam15291  81 EERI 84
 
Name Accession Description Interval E-value
Dermcidin pfam15291
Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to ...
 19-102 3.00e-50

Dermcidin, antibiotic peptide; Dermcidin is a family of peptides produced in the sweat to protect against pathogenic Gram-positive bacteria.


Pssm-ID: 405879  Cd Length: 84  Bit Score: 154.24  E-value: 3.00e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665505971   19 AYDPEAASAPGSGNPCHEASAAQKENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVGKGG 98
Cdd:pfam15291   1 AYDAEAASAPGSGNPCHEASAAQEENAGEDPGLARQAPKPRKQRSSLLEKGLDGAKKAVDGLEKLGKDAVDDLENTGKAG 80


                  ....
gi 665505971   99 EERL 102
Cdd:pfam15291  81 EERI 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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