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Conserved domains on  [gi|666335580|ref|NP_001287969|]
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uncharacterized protein C1orf54 isoform b precursor [Homo sapiens]

Protein Classification

DUF4634 domain-containing protein( domain architecture ID 10634550)

DUF4634 domain-containing protein similar to Homo sapiens C1orf54

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4634 pfam15465
Domain of unknown function (DUF4634); This family of proteins is found in eukaryotes. Proteins ...
 1-129 2.63e-70

Domain of unknown function (DUF4634); This family of proteins is found in eukaryotes. Proteins in this family are typically between 98 and 133 amino acids in length.


:

Pssm-ID: 434736  Cd Length: 131  Bit Score: 207.03  E-value: 2.63e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666335580    1 MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESEDRLNRLDKDI-TEAIETTIS 79
Cdd:pfam15465   1 MDVLFVAILAVPLILGQEYEDEEGLEEDDYYQVAYYYTVTPNYDDFGVNFTIDYSMFESEDRLNRLDKEVtTEAVETTIS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 666335580   80 LETARADHPKPVTVKPVTTEP-SPDLNDAVSSLRSPIPLLLSCAFVQVGMY 129
Cdd:pfam15465  81 LETERADHQKPVTVKPVTMEPqSPDLNDAVSSLQSPVSLLLSWALVQGGMY 131
 
Name Accession Description Interval E-value
DUF4634 pfam15465
Domain of unknown function (DUF4634); This family of proteins is found in eukaryotes. Proteins ...
 1-129 2.63e-70

Domain of unknown function (DUF4634); This family of proteins is found in eukaryotes. Proteins in this family are typically between 98 and 133 amino acids in length.


Pssm-ID: 434736  Cd Length: 131  Bit Score: 207.03  E-value: 2.63e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666335580    1 MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESEDRLNRLDKDI-TEAIETTIS 79
Cdd:pfam15465   1 MDVLFVAILAVPLILGQEYEDEEGLEEDDYYQVAYYYTVTPNYDDFGVNFTIDYSMFESEDRLNRLDKEVtTEAVETTIS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 666335580   80 LETARADHPKPVTVKPVTTEP-SPDLNDAVSSLRSPIPLLLSCAFVQVGMY 129
Cdd:pfam15465  81 LETERADHQKPVTVKPVTMEPqSPDLNDAVSSLQSPVSLLLSWALVQGGMY 131
 
Name Accession Description Interval E-value
DUF4634 pfam15465
Domain of unknown function (DUF4634); This family of proteins is found in eukaryotes. Proteins ...
 1-129 2.63e-70

Domain of unknown function (DUF4634); This family of proteins is found in eukaryotes. Proteins in this family are typically between 98 and 133 amino acids in length.


Pssm-ID: 434736  Cd Length: 131  Bit Score: 207.03  E-value: 2.63e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 666335580    1 MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESEDRLNRLDKDI-TEAIETTIS 79
Cdd:pfam15465   1 MDVLFVAILAVPLILGQEYEDEEGLEEDDYYQVAYYYTVTPNYDDFGVNFTIDYSMFESEDRLNRLDKEVtTEAVETTIS 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 666335580   80 LETARADHPKPVTVKPVTTEP-SPDLNDAVSSLRSPIPLLLSCAFVQVGMY 129
Cdd:pfam15465  81 LETERADHQKPVTVKPVTMEPqSPDLNDAVSSLQSPVSLLLSWALVQGGMY 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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