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Conserved domains on  [gi|1063742542|ref|NP_001318853|]
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Plant calmodulin-binding protein-like protein [Arabidopsis thaliana]

Protein Classification

CaM_binding domain-containing protein( domain architecture ID 10660603)

CaM_binding domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CaM_binding smart01054
Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a ...
 353-467 1.08e-31

Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a number of plant calmodulin-binding proteins, and are thought to constitute the calmodulin-binding domains.. Binding of the proteins to calmodulin depends on the presence of calcium ions.. These proteins are thought to be involved in various processes, such as plant defence responses.and stolonisation or tuberization.


:

Pssm-ID: 214998  Cd Length: 115  Bit Score: 117.89  E-value: 1.08e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063742542  353 AQQMTFKKGKVLDPKPEDSSPR-WIKFKKRVVQELKTQSEGKKKNLKDRRLGVetkTDSCEGSKREKVVLRHRKVEGKKK 431
Cdd:smart01054   2 AEKKEFRRGKIEDPKPEGERPRkWKFLKKVILLKRFVKSLEDKRRLNPREPNV---LPTEVEPEAEKVVLRHQDVGEKKN 78

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1063742542  432 MIT-LFNNVIEETVNKLTKVRKHKVKALIGAFETVIS 467
Cdd:smart01054  79 SEEwMFDYALRETVSKLAPARKKKVKLLVGAFETVIS 115
 
Name Accession Description Interval E-value
CaM_binding smart01054
Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a ...
 353-467 1.08e-31

Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a number of plant calmodulin-binding proteins, and are thought to constitute the calmodulin-binding domains.. Binding of the proteins to calmodulin depends on the presence of calcium ions.. These proteins are thought to be involved in various processes, such as plant defence responses.and stolonisation or tuberization.


Pssm-ID: 214998  Cd Length: 115  Bit Score: 117.89  E-value: 1.08e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063742542  353 AQQMTFKKGKVLDPKPEDSSPR-WIKFKKRVVQELKTQSEGKKKNLKDRRLGVetkTDSCEGSKREKVVLRHRKVEGKKK 431
Cdd:smart01054   2 AEKKEFRRGKIEDPKPEGERPRkWKFLKKVILLKRFVKSLEDKRRLNPREPNV---LPTEVEPEAEKVVLRHQDVGEKKN 78

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1063742542  432 MIT-LFNNVIEETVNKLTKVRKHKVKALIGAFETVIS 467
Cdd:smart01054  79 SEEwMFDYALRETVSKLAPARKKKVKLLVGAFETVIS 115
CaM_binding pfam07839
Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a ...
 355-467 3.75e-28

Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a number of plant calmodulin-binding proteins, and are thought to constitute the calmodulin-binding domains. Binding of the proteins to calmodulin depends on the presence of calcium ions. These proteins are thought to be involved in various processes, such as plant defence responses and stolonization or tuberization.


Pssm-ID: 462284 [Multi-domain]  Cd Length: 118  Bit Score: 108.14  E-value: 3.75e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063742542 355 QMTFKKGKVLDPKPED---SSPRWIKFKKRVVQELKTQSEGK-KKNLKDRRLGVETKTDSCEGSKREKVVLRHRKVEGKK 430
Cdd:pfam07839   1 KLRFKRGKVKDLQSEEkswNSPKKLIFRKRFKALDNQNSKGErRESLRRFNPREPRYLPLEPDPEAEKVVLRHQDVQEKK 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1063742542 431 KMIT-LFNNVIEETVNKLTKVRKHKVKALIGAFETVIS 467
Cdd:pfam07839  81 NAEEwMLNNVIEETASKLAEARKSKVKALVGAFETVIS 118
 
Name Accession Description Interval E-value
CaM_binding smart01054
Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a ...
 353-467 1.08e-31

Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a number of plant calmodulin-binding proteins, and are thought to constitute the calmodulin-binding domains.. Binding of the proteins to calmodulin depends on the presence of calcium ions.. These proteins are thought to be involved in various processes, such as plant defence responses.and stolonisation or tuberization.


Pssm-ID: 214998  Cd Length: 115  Bit Score: 117.89  E-value: 1.08e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063742542  353 AQQMTFKKGKVLDPKPEDSSPR-WIKFKKRVVQELKTQSEGKKKNLKDRRLGVetkTDSCEGSKREKVVLRHRKVEGKKK 431
Cdd:smart01054   2 AEKKEFRRGKIEDPKPEGERPRkWKFLKKVILLKRFVKSLEDKRRLNPREPNV---LPTEVEPEAEKVVLRHQDVGEKKN 78

                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 1063742542  432 MIT-LFNNVIEETVNKLTKVRKHKVKALIGAFETVIS 467
Cdd:smart01054  79 SEEwMFDYALRETVSKLAPARKKKVKLLVGAFETVIS 115
CaM_binding pfam07839
Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a ...
 355-467 3.75e-28

Plant calmodulin-binding domain; The sequences featured in this family are found repeated in a number of plant calmodulin-binding proteins, and are thought to constitute the calmodulin-binding domains. Binding of the proteins to calmodulin depends on the presence of calcium ions. These proteins are thought to be involved in various processes, such as plant defence responses and stolonization or tuberization.


Pssm-ID: 462284 [Multi-domain]  Cd Length: 118  Bit Score: 108.14  E-value: 3.75e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063742542 355 QMTFKKGKVLDPKPED---SSPRWIKFKKRVVQELKTQSEGK-KKNLKDRRLGVETKTDSCEGSKREKVVLRHRKVEGKK 430
Cdd:pfam07839   1 KLRFKRGKVKDLQSEEkswNSPKKLIFRKRFKALDNQNSKGErRESLRRFNPREPRYLPLEPDPEAEKVVLRHQDVQEKK 80

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1063742542 431 KMIT-LFNNVIEETVNKLTKVRKHKVKALIGAFETVIS 467
Cdd:pfam07839  81 NAEEwMLNNVIEETASKLAEARKSKVKALVGAFETVIS 118
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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