|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
79-658 |
2.29e-79 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 278.27 E-value: 2.29e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 79 SWRNNSDCCNWEGITCdTKSGEVIELDLSCSWLYGSFhsNSSLFRLQNLRVLDLTQNDLDGEIPSSIGNLSH-LTSLHLS 157
Cdd:PLN00113 50 NWNSSADVCLWQGITC-NNSSRVVSIDLSGKNISGKI--SSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSsLRYLNLS 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 158 YNQFLGLIPSSieNLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQI 237
Cdd:PLN00113 127 NNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQI 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 238 PSSIGNLARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISLLS 317
Cdd:PLN00113 205 PRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQ 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 318 NLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTLHFGnISSPSNLQYLIIGSNNFIGTIPRSLSRFVNLTLFDL 397
Cdd:PLN00113 285 KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA-LTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 398 SHLNTQCR-PVDFSIFSHLKSLddlrlsYLTTTTIDlNDILPYFKTLRSLDisgnlVSATNKSSVSSDPPSqsiqslyls 476
Cdd:PLN00113 364 STNNLTGEiPEGLCSSGNLFKL------ILFSNSLE-GEIPKSLGACRSLR-----RVRLQDNSFSGELPS--------- 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 477 gcGITDFPEILrtqhelgFLDVSNNKIKGQVPGWLWTLPNLFYLNLSNNTFISfessskkhGL-SSVRKPSMIHLFASNN 555
Cdd:PLN00113 423 --EFTKLPLVY-------FLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFG--------GLpDSFGSKRLENLDLSRN 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 556 NFTGKIPSFICGLRSLNTLDLSENNYNGSIPRCMEKLKStLFVLNLRQNNLSGGLPKHI--FESLRSLDVGHNLLVGKLP 633
Cdd:PLN00113 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKK-LVSLDLSHNQLSGQIPASFseMPVLSQLDLSQNQLSGEIP 564
|
570 580
....*....|....*....|....*
gi 1063710750 634 RSLIRFSNLEVLNVESNRINDTFPF 658
Cdd:PLN00113 565 KNLGNVESLVQVNISHNHLHGSLPS 589
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
171-864 |
5.76e-57 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 212.79 E-value: 5.76e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 171 NLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSnltflslpsndffgqipssignlARLTYL 250
Cdd:PLN00113 67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTS-----------------------SSLRYL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 251 YLSYNNFVGEIPSSFgnlnqlivlqvdsnklsgnvpisllnLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFT 330
Cdd:PLN00113 124 NLSNNNFTGSIPRGS--------------------------IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLV 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 331 GTLPSSLFNIpplirldlsdnqlngtlhfgnisspSNLQYLIIGSNNFIGTIPRSLSRFVNLTLFDLSHlNTQCRPVDFS 410
Cdd:PLN00113 178 GKIPNSLTNL-------------------------TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGY-NNLSGEIPYE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 411 IfSHLKSLDDLRLSYlttttidlndilpyfktlrsldisGNLVSATnkssvssdPPSqsiqslylsgcgitdfpeiLRTQ 490
Cdd:PLN00113 232 I-GGLTSLNHLDLVY------------------------NNLTGPI--------PSS-------------------LGNL 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 491 HELGFLDVSNNKIKGQVPGWLWTLPNLFYLNLSNNtfisFESSSKKHGLSSVRKPSMIHLFAsnNNFTGKIPSFICGLRS 570
Cdd:PLN00113 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDN----SLSGEIPELVIQLQNLEILHLFS--NNFTGKIPVALTSLPR 333
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 571 LNTLDLSENNYNGSIPRCMEKlKSTLFVLNLRQNNLSGGLPKHIFES--LRSLDVGHNLLVGKLPRSLIRFSNLEVLNVE 648
Cdd:PLN00113 334 LQVLQLWSNKFSGEIPKNLGK-HNNLTVLDLSTNNLTGEIPEGLCSSgnLFKLILFSNSLEGEIPKSLGACRSLRRVRLQ 412
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 649 SNRINDTFPFWLSSLSKLQVLVLRSNAFHGPIHEATF--PELRIIDISHNHFNGTLPTeyfvkwSAMSSLGKNEDQSNEK 726
Cdd:PLN00113 413 DNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWdmPSLQMLSLARNKFFGGLPD------SFGSKRLENLDLSRNQ 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 727 YMGsglyyqdsMVLMNKGLAMELVRiltiytaLDFSGNKFEGEIPKSIGLLKELLVLNLSNNAFGGHIPSSMGNLTALES 806
Cdd:PLN00113 487 FSG--------AVPRKLGSLSELMQ-------LKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQ 551
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 1063710750 807 LDVSQNKLTGEIPQELGDLSFLAYMNFSHNQLAGLVPGGTQFRRQNCSAFENNLGLFG 864
Cdd:PLN00113 552 LDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
126-382 |
5.24e-39 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 156.93 E-value: 5.24e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 126 NLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELS 205
Cdd:PLN00113 357 NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDIS 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 206 SNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNlARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNV 285
Cdd:PLN00113 437 NNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEI 515
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 286 PISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTLhfgnissP 365
Cdd:PLN00113 516 PDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSL-------P 588
|
250
....*....|....*..
gi 1063710750 366 SNLQYLIIGSNNFIGTI 382
Cdd:PLN00113 589 STGAFLAINASAVAGNI 605
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
117-435 |
2.13e-33 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 133.91 E-value: 2.13e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 117 SNSSLFRLQNLRVLDLTQNDLDgEIPSSIGNLSHLTSLHLSYNQfLGLIPSSIENLSRLTSLHLSSNQFSGqIPSSIGNL 196
Cdd:COG4886 105 GNEELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 197 SHLTSLELSSNQFSgQIPSSIGNLSNLTFLSLPSNDfFGQIPSSIGNLARLTYLYLSYNNFVgEIPsSFGNLNQLIVLQV 276
Cdd:COG4886 182 TNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 277 DSNKLSgNVPiSLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGT 356
Cdd:COG4886 258 SNNQLT-DLP-PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLV 335
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063710750 357 LHFGNISSPSNLQYLIIGSNNFIGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTIDLND 435
Cdd:COG4886 336 TLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNTE 414
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
118-457 |
3.56e-33 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 133.14 E-value: 3.56e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 118 NSSLFRLQNLRVLDLTQNDldgeipsSIGNLSHLTSLHLSYNQfLGLIPSSIENLSRLTSLHLSSNQFSgQIPSSIGNLS 197
Cdd:COG4886 89 LTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLT-DLPEPLGNLT 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 198 HLTSLELSSNQFSGqIPSSIGNLSNLTFLSLPSNDFfGQIPSSIGNLARLTYLYLSYNNfVGEIPSSFGNLNQLIVLQVD 277
Cdd:COG4886 160 NLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 278 SNKLSgNVPiSLLNLTRLSALLLSHNQFTgTIPNNISLlSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTL 357
Cdd:COG4886 237 NNQLT-DLP-ELGNLTNLEELDLSNNQLT-DLPPLANL-TNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLE 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 358 HFGNISSPSNLQYLIIGSNNFIGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTIDLNDIL 437
Cdd:COG4886 313 LLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLL 392
|
330 340
....*....|....*....|
gi 1063710750 438 PYFKTLRSLDISGNLVSATN 457
Cdd:COG4886 393 LLTTTAGVLLLTLALLDAVN 412
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
117-449 |
2.65e-32 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 130.82 E-value: 2.65e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 117 SNSSLFRLQNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQflglipsSIENLSRLTSLHLSSNQFSgQIPSSIGNL 196
Cdd:COG4886 64 SLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLT-DLPEELANL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 197 SHLTSLELSSNQFSgQIPSSIGNLSNLTFLSLPSNDfFGQIPSSIGNLARLTYLYLSYNNfVGEIPSSFGNLNQLIVLQV 276
Cdd:COG4886 136 TNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKELDLSNNQ-ITDLPEPLGNLTNLEELDL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 277 DSNKLSgNVPISLLNLTRLSALLLSHNQFTgTIPnNISLLSNLMDFEASNNAFTGTlpSSLFNIPPLIRLDLSDNQLNGT 356
Cdd:COG4886 213 SGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQLTDL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 357 L--HFGNISSPSNLQYLIIGSNNFIGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLDDLRLSYLTTTTIDLN 434
Cdd:COG4886 288 KlkELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLL 367
|
330
....*....|....*
gi 1063710750 435 DILPYFKTLRSLDIS 449
Cdd:COG4886 368 TLGLLGLLEATLLTL 382
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
120-346 |
1.30e-28 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 123.80 E-value: 1.30e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 120 SLFRLQNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNlSHL 199
Cdd:PLN00113 399 SLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRL 477
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 200 TSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSN 279
Cdd:PLN00113 478 ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063710750 280 KLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSlfNIPPLIRL 346
Cdd:PLN00113 558 QLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTS--GLPPCKRV 622
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
96-264 |
3.58e-24 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 109.55 E-value: 3.58e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 96 TKSGEVIELDLSCSWLYGSFhsNSSLFRLQNLRVLDLTQNDLDGEIPSSIGNlSHLTSLHLSYNQFLGLIPSSIENLSRL 175
Cdd:PLN00113 425 TKLPLVYFLDISNNNLQGRI--NSRKWDMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSEL 501
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 176 TSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYN 255
Cdd:PLN00113 502 MQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHN 581
|
....*....
gi 1063710750 256 NFVGEIPSS 264
Cdd:PLN00113 582 HLHGSLPST 590
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
83-207 |
9.62e-17 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 84.87 E-value: 9.62e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 83 NSDCC-----NWEGITC---DTKSGEVIE-LDLSCSWLYGSFHSNSSlfRLQNLRVLDLTQNDLDGEIPSSIGNLSHLTS 153
Cdd:PLN03150 393 NGDPCvpqqhPWSGADCqfdSTKGKWFIDgLGLDNQGLRGFIPNDIS--KLRHLQSINLSGNSIRGNIPPSLGSITSLEV 470
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1063710750 154 LHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGN-LSHLTSLELSSN 207
Cdd:PLN03150 471 LDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGrLLHRASFNFTDN 525
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
130-218 |
2.81e-16 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 83.33 E-value: 2.81e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 130 LDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQF 209
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....*....
gi 1063710750 210 SGQIPSSIG 218
Cdd:PLN03150 503 SGRVPAALG 511
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
346-707 |
5.98e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 81.13 E-value: 5.98e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 346 LDLSDNQLNGTLHFGNISSPSNLQYLIIGSNNFIGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLDDLRLSY 425
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 426 LTTTTIDLNDILPYFKTLRSLDISGNLVSATNKSsvssdppsqsIQSLYLSGCGITDFPEILRTQHELGFLDVSNNKIKg 505
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTN----------LESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 506 QVPGWLWTLPNLFYLNLSNNTFISFESSSKKhgLSSVRKpsmihLFASNNNFTgKIPSFICGLRSLNTLDLSENNYNgSI 585
Cdd:COG4886 150 DLPEPLGNLTNLKSLDLSNNQLTDLPEELGN--LTNLKE-----LDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 586 PRCMEKLKStLFVLNLRQNNLS-----GGLPKhifesLRSLDVGHNLLVGkLPrSLIRFSNLEVLNVESNRINDTFPFWL 660
Cdd:COG4886 221 PEPLANLTN-LETLDLSNNQLTdlpelGNLTN-----LEELDLSNNQLTD-LP-PLANLTNLKTLDLSNNQLTDLKLKEL 292
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1063710750 661 SSLSKLQVLVLRSNAFHGPIHEATFPELRIIDISHNHFNGTLPTEYF 707
Cdd:COG4886 293 ELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTT 339
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
159-242 |
6.23e-16 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 82.17 E-value: 6.23e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 159 NQFL-GLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQI 237
Cdd:PLN03150 427 NQGLrGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
|
....*
gi 1063710750 238 PSSIG 242
Cdd:PLN03150 507 PAALG 511
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
178-266 |
7.70e-15 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 78.70 E-value: 7.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 178 LHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNF 257
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....*....
gi 1063710750 258 VGEIPSSFG 266
Cdd:PLN03150 503 SGRVPAALG 511
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
323-674 |
2.17e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 2.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 323 EASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTLHFGNISSPSNLQYLIIGSNNFIGTIPRSLSRFVNLTLFDLSHLNT 402
Cdd:COG4886 3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 403 QCRPVDFSIFSHLKSLDDLRLSYlttttidlNDILPYFKTLRSLDISGNlvsatnksSVSSDPPS----QSIQSLYLSGC 478
Cdd:COG4886 83 SLLLLGLTDLGDLTNLTELDLSG--------NEELSNLTNLESLDLSGN--------QLTDLPEElanlTNLKELDLSNN 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 479 GITDFPEILRTQHELGFLDVSNNKIKGqVPGWLWTLPNLFYLNLSNNTFISFESSskkhgLSSVrkPSMIHLFASNNNFT 558
Cdd:COG4886 147 QLTDLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITDLPEP-----LGNL--TNLEELDLSGNQLT 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 559 gKIPSFICGLRSLNTLDLSENNYNgSIPrCMEKLKStLFVLNLRQNNLSGGLPKHIFESLRSLDVGHNLLVGKLPRSLIR 638
Cdd:COG4886 219 -DLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTN-LEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELEL 294
|
330 340 350
....*....|....*....|....*....|....*.
gi 1063710750 639 FSNLEVLNVESNRINDTFPFWLSSLSKLQVLVLRSN 674
Cdd:COG4886 295 LLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLL 330
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
164-654 |
5.28e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 75.36 E-value: 5.28e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 164 LIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGqiPSSIGN 243
Cdd:COG4886 17 LLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLG--LTDLGD 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 244 LARLTYLYLSYNNfvgeipsSFGNLNQLIVLQVDSNKLSgNVPISLLNLTRLSALLLSHNQFTgTIPNNISLLSNLMDFE 323
Cdd:COG4886 95 LTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLD 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 324 ASNNAFTgTLPSSLFNIPPLIRLDLSDNQLNgTLHfGNISSPSNLQYLIIgSNNFIGTIPRSLSRFVNLTLFDLSHlntq 403
Cdd:COG4886 166 LSNNQLT-DLPEELGNLTNLKELDLSNNQIT-DLP-EPLGNLTNLEELDL-SGNQLTDLPEPLANLTNLETLDLSN---- 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 404 crpvdfsifshlkslddlrlsylttttidlNDI--LPYFKTLRSLdisgnlvsatnkssvssdppsqsiQSLYLSGCGIT 481
Cdd:COG4886 238 ------------------------------NQLtdLPELGNLTNL------------------------EELDLSNNQLT 263
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 482 DFPEILrtqhelgfldvsnnkikgqvpgwlwTLPNLFYLNLSNNTFISFESSSKKHGLSSVRKPSMIHLFASNNNFTGKI 561
Cdd:COG4886 264 DLPPLA-------------------------NLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLL 318
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 562 PSFICGLRSLNTLDLSENNYNGSIPRCMEKLKSTLFVLNLRQNNLSGGLPKHIFESLRSLDVGHNLLVGKLPRSLIRFSN 641
Cdd:COG4886 319 LLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTA 398
|
490
....*....|...
gi 1063710750 642 LEVLNVESNRIND 654
Cdd:COG4886 399 GVLLLTLALLDAV 411
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
261-667 |
8.92e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 74.58 E-value: 8.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 261 IPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGtlPSSLFNI 340
Cdd:COG4886 18 LELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLG--LTDLGDL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 341 PPLIRLDLSDNQlngtlhfgNISSPSNLQYLIIgSNNFIGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLDd 420
Cdd:COG4886 96 TNLTELDLSGNE--------ELSNLTNLESLDL-SGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLD- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 421 LRLSYLTtttiDLNDILPYFKTLRSLDISGNLVSATnKSSVSSdppSQSIQSLYLSGCGITDFPEILRTQHELGFLDVSN 500
Cdd:COG4886 166 LSNNQLT----DLPEELGNLTNLKELDLSNNQITDL-PEPLGN---LTNLEELDLSGNQLTDLPEPLANLTNLETLDLSN 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 501 NKIKgQVPgWLWTLPNLFYLNLSNNTFISFESSSKKHGLSSvrkpsmihLFASNNNFTGKIPSFICGLRSLNTLDLSENN 580
Cdd:COG4886 238 NQLT-DLP-ELGNLTNLEELDLSNNQLTDLPPLANLTNLKT--------LDLSNNQLTDLKLKELELLLGLNSLLLLLLL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 581 YNGSIPRCMEKLKSTLFVLNLRQNNLSGGLPKHIFESLRSLDVGHNLLVGKLPRSLIRFSNLEVLNVESNRINDTFPFWL 660
Cdd:COG4886 308 LNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLL 387
|
....*..
gi 1063710750 661 SSLSKLQ 667
Cdd:COG4886 388 TLLLLLL 394
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
277-667 |
1.08e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 74.20 E-value: 1.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 277 DSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGT 356
Cdd:COG4886 7 SLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 357 LHFGNISSPSNLQYLIIGSNNfigtiprSLSRFVNLTLFDLSHLNTQCRPVDFSIFSHLKSLdDLRLSYLTtttiDLNDI 436
Cdd:COG4886 87 LGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLPEELANLTNLKEL-DLSNNQLT----DLPEP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 437 LPYFKTLRSLDISGNLVSATNKSSVSsdppSQSIQSLYLSGCGITDFPEILRTQHELGFLDVSNNKIKgQVPGWLWTLPN 516
Cdd:COG4886 155 LGNLTNLKSLDLSNNQLTDLPEELGN----LTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTN 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 517 LFYLNLSNNTFISFESSSKKHGLSSvrkpsmihLFASNNNFTGkiPSFICGLRSLNTLDLSENNYNG-SIPRCMEKLKST 595
Cdd:COG4886 230 LETLDLSNNQLTDLPELGNLTNLEE--------LDLSNNQLTD--LPPLANLTNLKTLDLSNNQLTDlKLKELELLLGLN 299
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063710750 596 LFVLNLRQNNLSGGLPKHIFESLRSLDVGHNLLVGKLPRSLIRFSNLEVLNVESNRINDTFPFWLSSLSKLQ 667
Cdd:COG4886 300 SLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGL 371
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
202-289 |
1.56e-13 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 74.47 E-value: 1.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 202 LELSSNQFSGQIPSSIGNLSNLTFLSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKL 281
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....*...
gi 1063710750 282 SGNVPISL 289
Cdd:PLN03150 503 SGRVPAAL 510
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
309-705 |
8.27e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 71.50 E-value: 8.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 309 IPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTLHFGNISSPSNLQYLIIGSNNFIGTIPRSLSR 388
Cdd:COG4886 15 LLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGD 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 389 FVNLTLFDLSHLNTqcrpvdfsiFSHLKSLDDLRLSYLTTTtiDLNDILPYFKTLRSLDISGNlvsatnksSVSSDPPS- 467
Cdd:COG4886 95 LTNLTELDLSGNEE---------LSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLSNN--------QLTDLPEPl 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 468 ---QSIQSLYLSGCGITDFPEILRTQHELGFLDVSNNKIKgQVPGWLWTLPNLFYLNLSNNTFISFESSskkhgLSSVrk 544
Cdd:COG4886 156 gnlTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLTDLPEP-----LANL-- 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 545 PSMIHLFASNNNFTgKIPSfICGLRSLNTLDLSENNYNgSIPRCMEKlkSTLFVLNLRQNNLSGGLPKHIFESLRSLDVG 624
Cdd:COG4886 228 TNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLT-DLPPLANL--TNLKTLDLSNNQLTDLKLKELELLLGLNSLL 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 625 HNLLVGKLPRSLIRFSNLEVLNVESNRINDTFPFWLSSLSKLQVLVLRSNAFHGPIHEATFPELRIIDISHNHFNGTLPT 704
Cdd:COG4886 303 LLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTL 382
|
.
gi 1063710750 705 E 705
Cdd:COG4886 383 A 383
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
758-864 |
2.59e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 70.61 E-value: 2.59e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 758 ALDFSGNKFEGEIPKSIGLLKELLVLNLSNNAFGGHIPSSMGNLTALESLDVSQNKLTGEIPQELGDLSFLAYMNFSHNQ 837
Cdd:PLN03150 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
|
90 100 110
....*....|....*....|....*....|
gi 1063710750 838 LAGLVP---GGTQFRRQNCSaFENNLGLFG 864
Cdd:PLN03150 502 LSGRVPaalGGRLLHRASFN-FTDNAGLCG 530
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
226-310 |
9.03e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 65.61 E-value: 9.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 226 LSLPSNDFFGQIPSSIGNLARLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQF 305
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....*
gi 1063710750 306 TGTIP 310
Cdd:PLN03150 503 SGRVP 507
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
124-419 |
2.21e-09 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 61.43 E-value: 2.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 124 LQNLRVLDLTQNDLDGEIPssigNLS---HLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIgNLSHLT 200
Cdd:PLN03210 633 LTGLRNIDLRGSKNLKEIP----DLSmatNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLY 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 201 SLELSSnqfsgqipssignLSNL-TFLSLPSNdffgqipssignlarLTYLYLsYNNFVGEIPSS--FGNLNQLIVLQVD 277
Cdd:PLN03210 708 RLNLSG-------------CSRLkSFPDISTN---------------ISWLDL-DETAIEEFPSNlrLENLDELILCEMK 758
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 278 SNKLSGNV----PISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLfNIPPLIRLDLSD-NQ 352
Cdd:PLN03210 759 SEKLWERVqpltPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGcSR 837
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063710750 353 LNGtlhFGNISspSNLQYLIIgSNNFIGTIPRSLSRFVNLTLFDLSHLNT-QCRPVDFSIFSHLKSLD 419
Cdd:PLN03210 838 LRT---FPDIS--TNISDLNL-SRTGIEEVPWWIEKFSNLSFLDMNGCNNlQRVSLNISKLKHLETVD 899
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
465-674 |
2.87e-09 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 59.68 E-value: 2.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 465 PPSQSIQSLYLSGCGIT-----DFPEILRTQHELGFLDVSNNKIKGQVPGW------LWTLPNLFYLNLSNNTFiSFESS 533
Cdd:cd00116 20 PKLLCLQVLRLEGNTLGeeaakALASALRPQPSLKELCLSLNETGRIPRGLqsllqgLTKGCGLQELDLSDNAL-GPDGC 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 534 skkHGLSSVRKPSMIHLFASNNNFTGK--IPSFICGLRS----LNTLDLSENNYNGsipRCMEKL------KSTLFVLNL 601
Cdd:cd00116 99 ---GVLESLLRSSSLQELKLNNNGLGDrgLRLLAKGLKDlppaLEKLVLGRNRLEG---ASCEALakalraNRDLKELNL 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063710750 602 RQNNLSGGLPKHIFESLRSldvghnllvgklprslirFSNLEVLNVESNRINDT----FPFWLSSLSKLQVLVLRSN 674
Cdd:cd00116 173 ANNGIGDAGIRALAEGLKA------------------NCNLEVLDLNNNGLTDEgasaLAETLASLKSLEVLNLGDN 231
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
259-337 |
9.55e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 59.06 E-value: 9.55e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063710750 259 GEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSL 337
Cdd:PLN03150 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
520-841 |
3.15e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 56.87 E-value: 3.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 520 LNLSNNTFISFESSSKKHGLSSVRKPSMIHLFASNNNFTGKIPSFICGLRSLNTLDLSENNYNGSIPRCMEKLKSTLFVL 599
Cdd:COG4886 17 LLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLT 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 600 NLRQNNLSGGLPKHIFESLRSLDVGHNLLVgKLPRSLIRFSNLEVLNVESNRINDtFPFWLSSLSKLQVLVLRSNAFHG- 678
Cdd:COG4886 97 NLTELDLSGNEELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLTD-LPEPLGNLTNLKSLDLSNNQLTDl 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 679 PIHEATFPELRIIDISHNHFNgTLPTEyfvkWSAMSSLgknedqsnekymgsglyyqdsmvlmnkglamelvriltiyTA 758
Cdd:COG4886 175 PEELGNLTNLKELDLSNNQIT-DLPEP----LGNLTNL----------------------------------------EE 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 759 LDFSGNKFEgeipksigllkellvlnlsnnafggHIPSSMGNLTALESLDVSQNKLTgEIPqELGDLSFLAYMNFSHNQL 838
Cdd:COG4886 210 LDLSGNQLT-------------------------DLPEPLANLTNLETLDLSNNQLT-DLP-ELGNLTNLEELDLSNNQL 262
|
...
gi 1063710750 839 AGL 841
Cdd:COG4886 263 TDL 265
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
143-303 |
4.70e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 54.79 E-value: 4.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 143 SSIGNLSH---LTSLHLsYNQFLGLIPSsIENLSRLTSLHLSSNqfsgQIpSSIGNLSHLTSLE---LSSNqfsgQIpSS 216
Cdd:cd21340 15 TKIDNLSLcknLKVLYL-YDNKITKIEN-LEFLTNLTHLYLQNN----QI-EKIENLENLVNLKklyLGGN----RI-SV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 217 IGNLSNLTFL--------SLPSNDFFGQIPSSIGNLAR-LTYLYLSYNNFvgEIPSSFGNLNQLIVLQVDSNKLSGNVPI 287
Cdd:cd21340 83 VEGLENLTNLeelhienqRLPPGEKLTFDPRSLAALSNsLRVLNISGNNI--DSLEPLAPLRNLEQLDASNNQISDLEEL 160
|
170
....*....|....*...
gi 1063710750 288 S--LLNLTRLSALLLSHN 303
Cdd:cd21340 161 LdlLSSWPSLRELDLTGN 178
|
|
| LRRNT_2 |
pfam08263 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
39-95 |
6.61e-08 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 462411 [Multi-domain] Cd Length: 41 Bit Score: 49.60 E-value: 6.61e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1063710750 39 LPEQRDALLELKNEFeigkpssndycyrnnsrVSPHPTTESWRNN-SDCCNWEGITCD 95
Cdd:pfam08263 1 LNDDGQALLAFKSSL-----------------NDPPGALSSWNSSsSDPCSWTGVTCD 41
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
423-882 |
1.27e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 54.94 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 423 LSYLTTTTIDLNDILPYFKTLRSLDISGNLVSATNKSSVSSDPPSQSIQSLYLSGCGITDFPEILRTQHELGFLDVSNNK 502
Cdd:COG4886 4 LLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 503 IKGQVPGWLWTLPNLFYLNLSNNTFISfessskkhGLSSVRKpsmihLFASNNNFTgKIPSFICGLRSLNTLDLSENNYN 582
Cdd:COG4886 84 LLLLGLTDLGDLTNLTELDLSGNEELS--------NLTNLES-----LDLSGNQLT-DLPEELANLTNLKELDLSNNQLT 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 583 gSIPRCMEKLKStLFVLNLRQNNLSGgLPKHIFE--SLRSLDVGHNLLvGKLPRSLIRFSNLEVLNVESNRINDtFPFWL 660
Cdd:COG4886 150 -DLPEPLGNLTN-LKSLDLSNNQLTD-LPEELGNltNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLTD-LPEPL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 661 SSLSKLQVLVLRSNAFHgpiheaTFPELriidishnhfngtlpteyfvkwSAMSSLgknedqsnekymgsglyyqdsmvl 740
Cdd:COG4886 225 ANLTNLETLDLSNNQLT------DLPEL----------------------GNLTNL------------------------ 252
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 741 mnkglamelvriltiyTALDFSGNKFEgEIPKSigllkellvlnlsnnafgghipssmGNLTALESLDVSQNKLTGEIPQ 820
Cdd:COG4886 253 ----------------EELDLSNNQLT-DLPPL-------------------------ANLTNLKTLDLSNNQLTDLKLK 290
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063710750 821 ELGDLSFLAYMNFSHNQLAGLVPGGTQFRRQNCSAFENNLGLFGPSLDEVCRDKHTPASQQN 882
Cdd:COG4886 291 ELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTL 352
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
539-611 |
1.40e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 55.21 E-value: 1.40e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063710750 539 LSSVRKPSMIHLfaSNNNFTGKIPSFICGLRSLNTLDLSENNYNGSIPRCMEKLKStLFVLNLRQNNLSGGLP 611
Cdd:PLN03150 438 ISKLRHLQSINL--SGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS-LRILNLNGNSLSGRVP 507
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
295-386 |
3.87e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 54.05 E-value: 3.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 295 LSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQLNGTL--HFGNISSpsnLQYLI 372
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIpeSLGQLTS---LRILN 496
|
90
....*....|....
gi 1063710750 373 IGSNNFIGTIPRSL 386
Cdd:PLN03150 497 LNGNSLSGRVPAAL 510
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
149-209 |
5.14e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.52 E-value: 5.14e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063710750 149 SHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQF 209
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
554-636 |
9.85e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 52.51 E-value: 9.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 554 NNNFTGKIPSFICGLRSLNTLDLSENNYNGSIPRCMEKLkSTLFVLNLRQNNLSGGLPKHIFE--SLRSLDVGHNLLVGK 631
Cdd:PLN03150 427 NQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSI-TSLEVLDLSYNSFNGSIPESLGQltSLRILNLNGNSLSGR 505
|
....*
gi 1063710750 632 LPRSL 636
Cdd:PLN03150 506 VPAAL 510
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
268-504 |
1.17e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.59 E-value: 1.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 268 LNQLIVLQVDSNKLSGN----VPISLLNLTRLSALLLSHNqFTGTIPNNISLL-------SNLMDFEASNNAFTGTLP-- 334
Cdd:cd00116 22 LLCLQVLRLEGNTLGEEaakaLASALRPQPSLKELCLSLN-ETGRIPRGLQSLlqgltkgCGLQELDLSDNALGPDGCgv 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 335 -SSLFNIPPLIRLDLSDNQLNGT----LHFGNISSPSNLQYLIIGSNNFIGTIPRSLS---------RFVNLTLFDLSHL 400
Cdd:cd00116 101 lESLLRSSSLQELKLNNNGLGDRglrlLAKGLKDLPPALEKLVLGRNRLEGASCEALAkalranrdlKELNLANNGIGDA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 401 NTQCRPVDFSIFSHLKSLDdLRLSYLTTT-TIDLNDILPYFKTLRSLDISGNLVSATNKSSVSS--DPPSQSIQSLYLSG 477
Cdd:cd00116 181 GIRALAEGLKANCNLEVLD-LNNNGLTDEgASALAETLASLKSLEVLNLGDNNLTDAGAAALASalLSPNISLLTLSLSC 259
|
250 260 270
....*....|....*....|....*....|..
gi 1063710750 478 CGITD-----FPEILRTQHELGFLDVSNNKIK 504
Cdd:cd00116 260 NDITDdgakdLAEVLAEKESLLELDLRGNKFG 291
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
125-185 |
1.18e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 46.36 E-value: 1.18e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063710750 125 QNLRVLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQF 185
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
545-719 |
2.81e-06 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 51.24 E-value: 2.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 545 PSMIHLFASNNNFTGKIPSFICGlrSLNTLDLSENNYNgSIPrcmEKLKSTLFVLNLRQNNLSGgLPKHIFESLRSLDVG 624
Cdd:PRK15370 198 PEQITTLILDNNELKSLPENLQG--NIKTLYANSNQLT-SIP---ATLPDTIQEMELSINRITE-LPERLPSALQSLDLF 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 625 HNLLVGkLPRSLIrfSNLEVLNVESNRI-----------------NDTFPFWLSSLS-KLQVLVLRSNAFHGpIHEATFP 686
Cdd:PRK15370 271 HNKISC-LPENLP--EELRYLSVYDNSIrtlpahlpsgithlnvqSNSLTALPETLPpGLKTLEAGENALTS-LPASLPP 346
|
170 180 190
....*....|....*....|....*....|....*....
gi 1063710750 687 ELRIIDISHNHFN---GTLP---TEYFVKWSAMSSLGKN 719
Cdd:PRK15370 347 ELQVLDVSKNQITvlpETLPptiTTLDVSRNALTNLPEN 385
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
274-357 |
6.81e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 49.81 E-value: 6.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 274 LQVDSNKLSGNVPISLLNLTRLSALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTLPSSLFNIPPLIRLDLSDNQL 353
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....
gi 1063710750 354 NGTL 357
Cdd:PLN03150 503 SGRV 506
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
246-305 |
7.70e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.05 E-value: 7.70e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 246 RLTYLYLSYNNFVGEIPSSFGNLNQLIVLQVDSNKLSGNVPISLLNLTRLSALLLSHNQF 305
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
599-685 |
1.59e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 48.66 E-value: 1.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 599 LNLRQNNLSGGLPKHI--FESLRSLDVGHNLLVGKLPRSLIRFSNLEVLNVESNRINDTFPFWLSSLSKLQVLVLRSNAF 676
Cdd:PLN03150 423 LGLDNQGLRGFIPNDIskLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
90
....*....|....*...
gi 1063710750 677 HG---------PIHEATF 685
Cdd:PLN03150 503 SGrvpaalggrLLHRASF 520
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
126-255 |
2.08e-05 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 48.25 E-value: 2.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 126 NLRVLDLTQNDLDGE----IPSSIGNLSHLTSLHLSYNQF-----LGLIPsSIENLSRLTSLHLSSNQFSGQ----IPSS 192
Cdd:COG5238 265 TVETLYLSGNQIGAEgaiaLAKALQGNTTLTSLDLSVNRIgdegaIALAE-GLQGNKTLHTLNLAYNGIGAQgaiaLAKA 343
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063710750 193 IGNLSHLTSLELSSNQFSGQ----IPSSIGNLSNLTFLSLPSNDFFGQ-----IPSSIGNlaRLTYLYLSYN 255
Cdd:COG5238 344 LQENTTLHSLDLSDNQIGDEgaiaLAKYLEGNTTLRELNLGKNNIGKQgaealIDALQTN--RLHTLILDGN 413
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
173-233 |
2.10e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.90 E-value: 2.10e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063710750 173 SRLTSLHLSSNQFSGQIPSSIGNLSHLTSLELSSNQFSGQIPSSIGNLSNLTFLSLPSNDF 233
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
172-458 |
4.41e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.55 E-value: 4.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 172 LSRLTSLHLSSNQFSgqipsSIGNLSHLTSLE---LSSNQFSgqipsSIGNLSNLTflslpsndffgqipssignlaRLT 248
Cdd:cd21340 1 LKRITHLYLNDKNIT-----KIDNLSLCKNLKvlyLYDNKIT-----KIENLEFLT---------------------NLT 49
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 249 YLYLSyNNFVGEIPSsFGNLNQLIVLQVDSNKLSgnVPISLLNLTRLSALLLSHNQftgtIPNNISLLSNlmdfeasnna 328
Cdd:cd21340 50 HLYLQ-NNQIEKIEN-LENLVNLKKLYLGGNRIS--VVEGLENLTNLEELHIENQR----LPPGEKLTFD---------- 111
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 329 ftgtlPSSLFNIPP-LIRLDLSDNqlngtlhfgNISSPSNLQYLiigsnnfigtiprslsrfVNLTLFDLSHlNTqcrpv 407
Cdd:cd21340 112 -----PRSLAALSNsLRVLNISGN---------NIDSLEPLAPL------------------RNLEQLDASN-NQ----- 153
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1063710750 408 dfsifshlksLDDLRlsylttttiDLNDILPYFKTLRSLDISGNLVSATNK 458
Cdd:cd21340 154 ----------ISDLE---------ELLDLLSSWPSLRELDLTGNPVCKKPK 185
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
473-652 |
6.20e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 45.16 E-value: 6.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 473 LYLSGCGITDFPEILRTQHeLGFLDVSNNKIKgQVPGwLWTLPNLFYLNLSNNtFISfesssKKHGLSSVRKpsMIHLFA 552
Cdd:cd21340 7 LYLNDKNITKIDNLSLCKN-LKVLYLYDNKIT-KIEN-LEFLTNLTHLYLQNN-QIE-----KIENLENLVN--LKKLYL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 553 SNNnftgKIpSFICGL---RSLNTLDLSENNY-NGSI----PRCMEKLKSTLFVLNLRQNNLSGGLPKHIFESLRSLDVG 624
Cdd:cd21340 76 GGN----RI-SVVEGLenlTNLEELHIENQRLpPGEKltfdPRSLAALSNSLRVLNISGNNIDSLEPLAPLRNLEQLDAS 150
|
170 180 190
....*....|....*....|....*....|
gi 1063710750 625 HNLL--VGKLPRSLIRFSNLEVLNVESNRI 652
Cdd:cd21340 151 NNQIsdLEELLDLLSSWPSLRELDLTGNPV 180
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
640-698 |
6.75e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 41.36 E-value: 6.75e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063710750 640 SNLEVLNVESNRINDTFPFWLSSLSKLQVLVLRSNAFHGpIHEATF---PELRIIDISHNHF 698
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT-LSPGAFsglPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
543-696 |
1.69e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 44.65 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 543 RKPSMIHLFASNNnFTGKIPSF----ICGLRS---LNTLDLSENNYNGSIPRCMEKL--KSTLFVLNLRQNNLSGGLPKH 613
Cdd:cd00116 49 PQPSLKELCLSLN-ETGRIPRGlqslLQGLTKgcgLQELDLSDNALGPDGCGVLESLlrSSSLQELKLNNNGLGDRGLRL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 614 IFESL-------RSLDVGHNLLVGKLPRS----LIRFSNLEVLNVESNRIND----TFPFWLSSLSKLQVLVLRSNAFHg 678
Cdd:cd00116 128 LAKGLkdlppalEKLVLGRNRLEGASCEAlakaLRANRDLKELNLANNGIGDagirALAEGLKANCNLEVLDLNNNGLT- 206
|
170 180
....*....|....*....|....*..
gi 1063710750 679 piHE---------ATFPELRIIDISHN 696
Cdd:cd00116 207 --DEgasalaetlASLKSLEVLNLGDN 231
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
413-680 |
4.33e-04 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 44.00 E-value: 4.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 413 SHLKSLDDLRLSYLTTTTIDLNDI--LPYFK-TLRSLDISGNLVSATN-------KSSVSSDP-------PSqSIQSLYL 475
Cdd:PRK15387 211 SGLTTLPDCLPAHITTLVIPDNNLtsLPALPpELRTLEVSGNQLTSLPvlppgllELSIFSNPlthlpalPS-GLCKLWI 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 476 SGCGITDFPEILRTQHELgflDVSNNKIKGqvpgwLWTLPN-LFYLNLSNNTFISF--------ESSSKKHGLSSVRK-P 545
Cdd:PRK15387 290 FGNQLTSLPVLPPGLQEL---SVSDNQLAS-----LPALPSeLCKLWAYNNQLTSLptlpsglqELSVSDNQLASLPTlP 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 546 SMIH-LFASNNNFTgKIPSFICGLRSLntldLSENNYNGSIPRCMEKLKStlfvLNLRQNNLSGgLPKhIFESLRSLDVG 624
Cdd:PRK15387 362 SELYkLWAYNNRLT-SLPALPSGLKEL----IVSGNRLTSLPVLPSELKE----LMVSGNRLTS-LPM-LPSGLLSLSVY 430
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1063710750 625 HNLLVgKLPRSLIRFSNLEVLNVESNRINDtfpfwlsslSKLQVL--VLRSNAFHGPI 680
Cdd:PRK15387 431 RNQLT-RLPESLIHLSSETTVNLEGNPLSE---------RTLQALreITSAPGYSGPI 478
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
118-241 |
1.44e-03 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 42.08 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 118 NSSLFRLQNLRVLDLTQNDLDGE----IPSSIGNLSHLTSLHLSYNQFLG----LIPSSIENLSRLTSLHLSSNQFSGQ- 188
Cdd:COG5238 285 AKALQGNTTLTSLDLSVNRIGDEgaiaLAEGLQGNKTLHTLNLAYNGIGAqgaiALAKALQENTTLHSLDLSDNQIGDEg 364
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063710750 189 ---IPSSIGNLSHLTSLELSSNQFSGQ-----IPSSIGNlsNLTFLSLPSNDFFGQIPSSI 241
Cdd:COG5238 365 aiaLAKYLEGNTTLRELNLGKNNIGKQgaealIDALQTN--RLHTLILDGNLIGAEAQQRL 423
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
617-674 |
1.59e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.50 E-value: 1.59e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1063710750 617 SLRSLDVGHNLLVGKLPRSLIRFSNLEVLNVESNRINDTFPFWLSSLSKLQVLVLRSN 674
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
594-652 |
2.59e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 2.59e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063710750 594 STLFVLNLRQNNLSGgLPKHIF---ESLRSLDVGHNLLVGKLPRSLIRFSNLEVLNVESNRI 652
Cdd:pfam13855 1 PNLRSLDLSNNRLTS-LDDGAFkglSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
465-628 |
2.88e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 40.80 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 465 PPSQSIQSLYLSGCGITDFP-----EILRTQHELGFLDVSNNKIKGQ-----VPGwLWTLPNLFYLNLSNNTFISFESSS 534
Cdd:cd00116 134 DLPPALEKLVLGRNRLEGAScealaKALRANRDLKELNLANNGIGDAgiralAEG-LKANCNLEVLDLNNNGLTDEGASA 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 535 KKHGLSSVRKPSMIHLfaSNNNFTGKI-----PSFICGLRSLNTLDLSENN--YNGSIPRCmEKL--KSTLFVLNLRQNN 605
Cdd:cd00116 213 LAETLASLKSLEVLNL--GDNNLTDAGaaalaSALLSPNISLLTLSLSCNDitDDGAKDLA-EVLaeKESLLELDLRGNK 289
|
170 180 190
....*....|....*....|....*....|
gi 1063710750 606 LSGGLPKHIFESL-------RSLDVGHNLL 628
Cdd:cd00116 290 FGEEGAQLLAESLlepgnelESLWVKDDSF 319
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
196-455 |
3.82e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 40.42 E-value: 3.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 196 LSHLTSLELSSNQFSG----QIPSSIGNLSNLTFLSLPSNdFFGQIPSSIG-------NLARLTYLYLSYNNFVGEIPSS 264
Cdd:cd00116 22 LLCLQVLRLEGNTLGEeaakALASALRPQPSLKELCLSLN-ETGRIPRGLQsllqgltKGCGLQELDLSDNALGPDGCGV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 265 FGNLNQ---LIVLQVDSNKLSGN-VPI---SLLNLT-RLSALLLSHNQFTGT----IPNNISLLSNLMDFEASNNAFTGT 332
Cdd:cd00116 101 LESLLRsssLQELKLNNNGLGDRgLRLlakGLKDLPpALEKLVLGRNRLEGAsceaLAKALRANRDLKELNLANNGIGDA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 333 LPSSLFNIPP----LIRLDLSDNQLN---GTLHFGNISSPSNLQYLIIGSNnfigtiprslsrfvNLTLFDLSHLNTQCR 405
Cdd:cd00116 181 GIRALAEGLKancnLEVLDLNNNGLTdegASALAETLASLKSLEVLNLGDN--------------NLTDAGAAALASALL 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1063710750 406 pvdfsifSHLKSLDDLRLSYLTTTT---IDLNDILPYFKTLRSLDISGNLVSA 455
Cdd:cd00116 247 -------SPNISLLTLSLSCNDITDdgaKDLAEVLAEKESLLELDLRGNKFGE 292
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
273-525 |
4.96e-03 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 40.54 E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 273 VLQVDSNKLSGNVPISLLNLTRL-----SALLLSHNQFTGTIPNNISLLSNLMDFEASNNAFTGTlpsslfnIPPLIRLD 347
Cdd:COG5238 89 LLVVDWEGAEEVSPVALAETATAvatppPDLRRIMAKTLEDSLILYLALPRRINLIQVLKDPLGG-------NAVHLLGL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 348 LSDNQLNGTLHFGNISSPSNLQYLIIGSNNF----IGTIPRSLSRFVNLTLFDLSHLNTQCRPVDFsIFSHLKSLDDLRL 423
Cdd:COG5238 162 AARLGLLAAISMAKALQNNSVETVYLGCNQIgdegIEELAEALTQNTTVTTLWLKRNPIGDEGAEI-LAEALKGNKSLTT 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063710750 424 SYLTTTTID------LNDILPYFKTLRSLDISGNLVSATNKSSVSSD-PPSQSIQSLYLSGCGITD-----FPEILRTQH 491
Cdd:COG5238 241 LDLSNNQIGdegviaLAEALKNNTTVETLYLSGNQIGAEGAIALAKAlQGNTTLTSLDLSVNRIGDegaiaLAEGLQGNK 320
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1063710750 492 ELGFLDVSNNKIKGQvpGW------LWTLPNLFYLNLSNN 525
Cdd:COG5238 321 TLHTLNLAYNGIGAQ--GAialakaLQENTTLHSLDLSDN 358
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
645-703 |
6.20e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.18 E-value: 6.20e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063710750 645 LNVESNRINDTFPFWLSSLSKLQVLVLRSNAFHG--PIHEATFPELRIIDISHNHFNGTLP 703
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGniPPSLGSITSLEVLDLSYNSFNGSIP 483
|
|
| |
