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L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis thaliana]
Protein Classification
fkp and Fucokinase domain-containing protein ( domain architecture ID 13490766 )
fkp and Fucokinase domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
Fucokinase
pfam07959 L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated ...
24-422
1.73e-153
L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalyzed by GDP-L-fucose pyrophosphorylase.
Pssm-ID: 462323
Cd Length: 405
Bit Score: 458.65
E-value: 1.73e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 24 AGG D S K R V P W A NPM GK V F LP LP Y laa D DP D GPV PL L F D HI LAI A S CARQ af QDQG G LFIMTG DV LPC FDA FKMTLPEDAA 103
Cdd:pfam07959 1 AGG Y S Q R L P S A SAL GK I F TA LP L --- E DP G GPV YQ L L D LK LAI Y S DFPS -- RMKP G VLVCST DV ILL FDA NEISFDKPGV 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 104 SIVTV P IT L D I AS NHGV I V TSKSE S LAESYTVS L VN D L L Q KP TV E D L VKKD A I L H DG RTL LD T GI ISAR G RAWSD L V AL G 183
Cdd:pfam07959 76 TALAH P SS L A I GT NHGV F V LDPQG S SEKDLEIG L CR D F L H KP SE E E L QASG A V L K DG FVY LD S GI VFFD G KTAEK L L AL Y 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 184 C S CQ P MIL E LIGSKKEMS LY E D LVA A WV P SRHDWLRT ------------ RP LG E L L VNS L GRQKMYSY C TYDLQ F L HFGT 251
Cdd:pfam07959 156 V S PG P LDC E TYLGPLQID LY G D FLQ A LG P GATLEYFL ntanvgkeeasl RP AR E E L WKL L RGTPLNVI C LPNSK F Y HFGT 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 252 SS E V L D HL S GD A S GI V GR rhlc SIPA T TV S D IA ------ A SSVILS S EIA PGVS I G ED S L I YDSTVS G A V Q IGS QS I VV G 325
Cdd:pfam07959 236 TA E Y L E HL T GD C S LR V EL ---- GLTS T AF S V IA narqlk A GASVIN S VLE PGVS V G PG S V I EYCHLG G P V S IGS GC I LS G 311
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 326 IHIP S ED lgtpes F R FM LPD RHC L WEV PL VGHK G -- R V I V YC G L HDN P K N S IH - KDG TF C GKPLE KV L FDL GI EES DLW S 402
Cdd:pfam07959 312 LDLS S SL ------ A R LE LPD DTF L HTL PL KLGG G kl Y V T V VF G I HDN L K S S VS d GNL TF L GKPLE DF L SLT GI QPE DLW F 385
410 420
....*....|....*....|
gi 1063679130 403 S YVAQDRC LWNA K LFP ILTY 422
Cdd:pfam07959 386 S GEPREKS LWNA R LFP VCHD 405
fkp super family
cl36248 bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
19-935
9.49e-99
bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
PRK13412 :Pssm-ID: 237379 [Multi-domain]
Cd Length: 974
Bit Score: 332.18
E-value: 9.49e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 19 VLM LHAGG D S K R V P WAN P M GK VFL P L P YLAA ddpd GPVPL L FDHI L AIASCARQAFQDQG ---- GLF I MT GDV LPCFDAF 94
Cdd:PRK13412 94 RIL LHAGG Q S R R L P GYA P S GK ILT P V P VFRW ---- ERGQR L SQNL L SLQLPLYERIMSKA pegl HTL I AS GDV YIRSEQP 169
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 95 KMTL PE da A SI V TVPITL D -- I A S NHGV I V T S KS eslaesy TVSLVNDL LQKP TV E D L vkk DAILHDGRT L L D T GI ISAR 172
Cdd:PRK13412 170 LQDI PE -- A DV V CYGLWV D ps L A T NHGV F V S S RK ------- SPERLDFM LQKP SL E E L --- GGLSKTHLF L M D I GI WLLS 237
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 173 G RA WSD L VALG cscqpm IL E LI G SK K EMS LY E D LVA A ---- WVPSRHD wlrtrp L GE L L V NS L GRQKM ysyctydl Q F L H 248
Cdd:PRK13412 238 D RA VEL L MKRS ------ GK E DG G KL K YYD LY S D FGL A lgth PRIGDDE ------ L NA L S V AI L PLPGG -------- E F Y H 297
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 249 F GTS S E VLD ------ H L SG D ASG I VG R R hlcsipattv SDIAASSVILSSEIAPGVSIGEDS L - I YD S T V SGAVQIG S Q S 321
Cdd:PRK13412 298 Y GTS R E LIS stlavq N L VT D QRR I MH R K ---------- VKPHPAMFVQNAVLSGKLTAENAT L w I EN S H V GEGWKLA S R S 367
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 322 I VV G I hipsedlgt PE - S FRFM LP DRH C LWE VP l VG HK G R V IVYC GL H D NP K NSIHKD - G T FC G K P LEKVLFDL G IEES D 399
Cdd:PRK13412 368 I IT G V --------- PE n S WNLD LP EGV C IDV VP - VG DR G F V ARPY GL D D VF K GALADG k T T WF G R P FLEWMEAR G LSWP D 437
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 400 L wssy VAQDRC L WN A K LFP IL T YS E M L - KLAS W LMGLDDS rn K E KIKL W RS S QRV S LE E L hgsinfpemcngss NHQ A D L 478
Cdd:PRK13412 438 L ---- KGRTDD L QA A H LFP VV T SV E E L g AVLR W MLSEPSL -- E E GKEI W LR S EKL S AD E I -------------- SAY A N L 497
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 479 A GGI A KAC ---- M N YGM L GR N LSQLCHEI L QKESLGLEICKNF LD QCPKFQ E QN ski LPKS R ayqvevdl LRACGDE A KA 554
Cdd:PRK13412 498 A RLY A QRE afrk A N WRA L AA N HEKSVFYQ L DLADAAEDFVRLL LD MPEILP E DA --- PLML R -------- IHNRMFR A RI 566
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 555 IE L EHK vwg AVA EE TAS A V R Y g F R EH LL ESSGKSHSENHIS hpdr V FQPRRTKVEL PVR V D FV GGW S DTPP WS L ERA G Y V 634
Cdd:PRK13412 567 LK L SGA --- RYR EE EQA A F R L - L R DG LL DGAYPRKQTPKLE ---- V YSDQIVWGRS PVR I D LA GGW T DTPP YC L YSG G N V 638
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 635 L N M AI T L E G SL P IGTIIETTNQMG I SIQ - D D A G NELHIEDPISIKTPFE V ND PF RLV K S AL LVT G IVQENFVD S ------ 707
Cdd:PRK13412 639 V N L AI E L N G QP P LQVYVKPCSEPH I VLR s I D L G AMEVVRTNEELRDYKK V GS PF SIP K A AL CLA G FAPRFSAE S yaslee 718
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 708 ------ T G LA I KTW A NV P R GSGLGTSSILAA A V VKGLLQIS n G DESNE N - I ARLV LVLEQL MG TGGGWQDQ I GG LY PG I K 780
Cdd:PRK13412 719 qlkafg S G IE I TLL A AI P A GSGLGTSSILAA T V LGAISDFC - G LAWDK N e I CNRT LVLEQL LT TGGGWQDQ Y GG VL PG V K 797
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 781 FTSSFP G IPMRLQ V VP L LA S PQLIS E LEQRL L VVF TG QV R L A HQV L HKV V TRYLQRDNLLISSIKRLTEL A KSGR EA LMN 860
Cdd:PRK13412 798 LLQTGA G FAQSPL V RW L PD S LFTQP E YRDCH L LYY TG IT R T A KGI L AEI V RSMFLNSTAHLQLLHEMKAH A LDMY EA IQR 877
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063679130 861 C E VD E V G DIMSEA W RLHQE LD PYCSNEF V DKLF E FSQP Y SS G F KL V GAGGGG FSLIL AKD AEK A KEL R QR L E E H A 935
Cdd:PRK13412 878 G E FE E F G RLVGKT W EQNKA LD SGTNPAA V EAII E LIKD Y TL G Y KL P GAGGGG YLYMV AKD PGA A ERI R KI L T E N A 952
Name
Accession
Description
Interval
E-value
Fucokinase
pfam07959 L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated ...
24-422
1.73e-153
L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalyzed by GDP-L-fucose pyrophosphorylase.
Pssm-ID: 462323
Cd Length: 405
Bit Score: 458.65
E-value: 1.73e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 24 AGG D S K R V P W A NPM GK V F LP LP Y laa D DP D GPV PL L F D HI LAI A S CARQ af QDQG G LFIMTG DV LPC FDA FKMTLPEDAA 103
Cdd:pfam07959 1 AGG Y S Q R L P S A SAL GK I F TA LP L --- E DP G GPV YQ L L D LK LAI Y S DFPS -- RMKP G VLVCST DV ILL FDA NEISFDKPGV 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 104 SIVTV P IT L D I AS NHGV I V TSKSE S LAESYTVS L VN D L L Q KP TV E D L VKKD A I L H DG RTL LD T GI ISAR G RAWSD L V AL G 183
Cdd:pfam07959 76 TALAH P SS L A I GT NHGV F V LDPQG S SEKDLEIG L CR D F L H KP SE E E L QASG A V L K DG FVY LD S GI VFFD G KTAEK L L AL Y 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 184 C S CQ P MIL E LIGSKKEMS LY E D LVA A WV P SRHDWLRT ------------ RP LG E L L VNS L GRQKMYSY C TYDLQ F L HFGT 251
Cdd:pfam07959 156 V S PG P LDC E TYLGPLQID LY G D FLQ A LG P GATLEYFL ntanvgkeeasl RP AR E E L WKL L RGTPLNVI C LPNSK F Y HFGT 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 252 SS E V L D HL S GD A S GI V GR rhlc SIPA T TV S D IA ------ A SSVILS S EIA PGVS I G ED S L I YDSTVS G A V Q IGS QS I VV G 325
Cdd:pfam07959 236 TA E Y L E HL T GD C S LR V EL ---- GLTS T AF S V IA narqlk A GASVIN S VLE PGVS V G PG S V I EYCHLG G P V S IGS GC I LS G 311
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 326 IHIP S ED lgtpes F R FM LPD RHC L WEV PL VGHK G -- R V I V YC G L HDN P K N S IH - KDG TF C GKPLE KV L FDL GI EES DLW S 402
Cdd:pfam07959 312 LDLS S SL ------ A R LE LPD DTF L HTL PL KLGG G kl Y V T V VF G I HDN L K S S VS d GNL TF L GKPLE DF L SLT GI QPE DLW F 385
410 420
....*....|....*....|
gi 1063679130 403 S YVAQDRC LWNA K LFP ILTY 422
Cdd:pfam07959 386 S GEPREKS LWNA R LFP VCHD 405
fkp
PRK13412 bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
19-935
9.49e-99
bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
Pssm-ID: 237379 [Multi-domain]
Cd Length: 974
Bit Score: 332.18
E-value: 9.49e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 19 VLM LHAGG D S K R V P WAN P M GK VFL P L P YLAA ddpd GPVPL L FDHI L AIASCARQAFQDQG ---- GLF I MT GDV LPCFDAF 94
Cdd:PRK13412 94 RIL LHAGG Q S R R L P GYA P S GK ILT P V P VFRW ---- ERGQR L SQNL L SLQLPLYERIMSKA pegl HTL I AS GDV YIRSEQP 169
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 95 KMTL PE da A SI V TVPITL D -- I A S NHGV I V T S KS eslaesy TVSLVNDL LQKP TV E D L vkk DAILHDGRT L L D T GI ISAR 172
Cdd:PRK13412 170 LQDI PE -- A DV V CYGLWV D ps L A T NHGV F V S S RK ------- SPERLDFM LQKP SL E E L --- GGLSKTHLF L M D I GI WLLS 237
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 173 G RA WSD L VALG cscqpm IL E LI G SK K EMS LY E D LVA A ---- WVPSRHD wlrtrp L GE L L V NS L GRQKM ysyctydl Q F L H 248
Cdd:PRK13412 238 D RA VEL L MKRS ------ GK E DG G KL K YYD LY S D FGL A lgth PRIGDDE ------ L NA L S V AI L PLPGG -------- E F Y H 297
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 249 F GTS S E VLD ------ H L SG D ASG I VG R R hlcsipattv SDIAASSVILSSEIAPGVSIGEDS L - I YD S T V SGAVQIG S Q S 321
Cdd:PRK13412 298 Y GTS R E LIS stlavq N L VT D QRR I MH R K ---------- VKPHPAMFVQNAVLSGKLTAENAT L w I EN S H V GEGWKLA S R S 367
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 322 I VV G I hipsedlgt PE - S FRFM LP DRH C LWE VP l VG HK G R V IVYC GL H D NP K NSIHKD - G T FC G K P LEKVLFDL G IEES D 399
Cdd:PRK13412 368 I IT G V --------- PE n S WNLD LP EGV C IDV VP - VG DR G F V ARPY GL D D VF K GALADG k T T WF G R P FLEWMEAR G LSWP D 437
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 400 L wssy VAQDRC L WN A K LFP IL T YS E M L - KLAS W LMGLDDS rn K E KIKL W RS S QRV S LE E L hgsinfpemcngss NHQ A D L 478
Cdd:PRK13412 438 L ---- KGRTDD L QA A H LFP VV T SV E E L g AVLR W MLSEPSL -- E E GKEI W LR S EKL S AD E I -------------- SAY A N L 497
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 479 A GGI A KAC ---- M N YGM L GR N LSQLCHEI L QKESLGLEICKNF LD QCPKFQ E QN ski LPKS R ayqvevdl LRACGDE A KA 554
Cdd:PRK13412 498 A RLY A QRE afrk A N WRA L AA N HEKSVFYQ L DLADAAEDFVRLL LD MPEILP E DA --- PLML R -------- IHNRMFR A RI 566
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 555 IE L EHK vwg AVA EE TAS A V R Y g F R EH LL ESSGKSHSENHIS hpdr V FQPRRTKVEL PVR V D FV GGW S DTPP WS L ERA G Y V 634
Cdd:PRK13412 567 LK L SGA --- RYR EE EQA A F R L - L R DG LL DGAYPRKQTPKLE ---- V YSDQIVWGRS PVR I D LA GGW T DTPP YC L YSG G N V 638
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 635 L N M AI T L E G SL P IGTIIETTNQMG I SIQ - D D A G NELHIEDPISIKTPFE V ND PF RLV K S AL LVT G IVQENFVD S ------ 707
Cdd:PRK13412 639 V N L AI E L N G QP P LQVYVKPCSEPH I VLR s I D L G AMEVVRTNEELRDYKK V GS PF SIP K A AL CLA G FAPRFSAE S yaslee 718
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 708 ------ T G LA I KTW A NV P R GSGLGTSSILAA A V VKGLLQIS n G DESNE N - I ARLV LVLEQL MG TGGGWQDQ I GG LY PG I K 780
Cdd:PRK13412 719 qlkafg S G IE I TLL A AI P A GSGLGTSSILAA T V LGAISDFC - G LAWDK N e I CNRT LVLEQL LT TGGGWQDQ Y GG VL PG V K 797
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 781 FTSSFP G IPMRLQ V VP L LA S PQLIS E LEQRL L VVF TG QV R L A HQV L HKV V TRYLQRDNLLISSIKRLTEL A KSGR EA LMN 860
Cdd:PRK13412 798 LLQTGA G FAQSPL V RW L PD S LFTQP E YRDCH L LYY TG IT R T A KGI L AEI V RSMFLNSTAHLQLLHEMKAH A LDMY EA IQR 877
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063679130 861 C E VD E V G DIMSEA W RLHQE LD PYCSNEF V DKLF E FSQP Y SS G F KL V GAGGGG FSLIL AKD AEK A KEL R QR L E E H A 935
Cdd:PRK13412 878 G E FE E F G RLVGKT W EQNKA LD SGTNPAA V EAII E LIKD Y TL G Y KL P GAGGGG YLYMV AKD PGA A ERI R KI L T E N A 952
COG2605
COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction ...
611-934
7.02e-62
Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only];
Pssm-ID: 442017 [Multi-domain]
Cd Length: 328
Bit Score: 213.12
E-value: 7.02e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 611 P V R VD F V GG WS D T PP WS LE RA G Y VLN M AI tleg SLPIGTII E TTNQMG I SIQ - D D AGNELHIEDPIS I ktpfevnd P FRL 689
Cdd:COG2605 6 P L R IS F A GG GT D L PP YY LE HG G A VLN A AI ---- DKYAYVTL E PRFDGK I RLS s S D TERVETVDEDDD I -------- P HPV 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 690 VKS AL LVT GI vqenfvd ST GL A I K T WANV P R GSGLG T SS I L AA A VVKG L LQISNGDE S NENI ARL VLVL E Q - LM G TG GG W 768
Cdd:COG2605 74 IRE AL KLF GI ------- GD GL E I T T DSDA P A GSGLG S SS A L TV A LLNA L HALLGLPL S PYDL ARL AYEI E R n DL G EP GG K 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 769 QDQ IGGLYP G IK F TSSF P G ip M R LQ V V PL LA SP QLIS ELE QR LL VVF TG QV R LAHQV L HKV V TRYLQR D NLLISSIKRLT 848
Cdd:COG2605 147 QDQ YAAAFG G FN F IEFG P D -- G R VI V N PL RI SP EILN ELE SN LL LFY TG IT R ESSDI L KEQ V KNVEDG D EATLEALHEMK 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 849 ELA KSGR EAL MNCEV DE V G DIMS E A W R L HQE L DPYC SN EFV D KLF E FS - QPYSS G F KL V GAGGGGF S L IL A KD a E KAKEL 927
Cdd:COG2605 225 ELA LEMK EAL LKGDL DE F G ELLN E G W E L KKR L ASGI SN PAI D EIY E LA r KAGAL G G KL L GAGGGGF L L FY A PP - E RREAV 303
....*..
gi 1063679130 928 R QR L EEH 934
Cdd:COG2605 304 R EA L SKA 310
mevalon_kin
TIGR00549 mevalonate kinase; This model represents mevalonate kinase, the third step in the mevalonate ...
717-917
5.44e-10
mevalonate kinase; This model represents mevalonate kinase, the third step in the mevalonate pathway of isopentanyl pyrophosphate (IPP) biosynthesis. IPP is a common intermediate for a number of pathways including cholesterol biosynthesis. This model covers enzymes from eukaryotes, archaea and bacteria. The related enzyme from the same pathway, phosphmevalonate kinase, serves as an outgroup for this clade. Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped. [Central intermediary metabolism, Other]
Pssm-ID: 273130 [Multi-domain]
Cd Length: 273
Bit Score: 61.15
E-value: 5.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 717 NV P R G S GLG T S SIL A A A VVKG L LQISNGDE S N E NI A R L VLVL E QLM - G TGG G WQDQI --- GG L ypg IK F TSSFP gipmrl 792
Cdd:TIGR00549 86 EI P P G R GLG S S AAV A V A LIRA L ADYFGSEL S K E EL A E L ANEA E KIA h G KPS G IDTAT sts GG P --- VY F EKGEG ------ 156
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 793 q VVPL L A S PQL iseleq RLLVVF TG QVRLAHQVLHK V VTRYLQRDN L LI S SIKRLT EL AKSGRE AL MNCE V DEV G DI M SE 872
Cdd:TIGR00549 157 - EFTK L I S LDG ------ YFVIAD TG VSGSTKEAVAR V RQLLERFPE L ID S IMDAIG EL TLEAKA AL QDGD V ESL G EL M NI 229
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1063679130 873 AWR L HQE L D py C S NEFV D K L F E FSQPYSS - G F KL V GAGGGG FSLI L 917
Cdd:TIGR00549 230 NQG L LKA L G -- V S HPKL D Q L V E IARKAGA l G A KL T GAGGGG CMIA L 273
GHMP_kinases_C
pfam08544 GHMP kinases C terminal; This family includes homoserine kinases, galactokinases and ...
855-936
3.85e-09
GHMP kinases C terminal; This family includes homoserine kinases, galactokinases and mevalonate kinases.
Pssm-ID: 430063 [Multi-domain]
Cd Length: 85
Bit Score: 54.40
E-value: 3.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 855 R EAL MNCEVD E V G DIMS E AWRLHQE L DPY - CSNEFV D K L F E FSQPYSS G F KL V G A GGG GFSLI L A KD AEK A K E LRQR L E E 933
Cdd:pfam08544 2 L EAL LRGDLE E L G KLLT E SAESLEP L LVV g ILPPEL D E L L E ALLELGL G A KL S G S GGG PTVFA L F KD EDD A E E VARA L R E 81
...
gi 1063679130 934 HAE 936
Cdd:pfam08544 82 AGK 84
Name
Accession
Description
Interval
E-value
Fucokinase
pfam07959 L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated ...
24-422
1.73e-153
L-fucokinase; In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalyzed by GDP-L-fucose pyrophosphorylase.
Pssm-ID: 462323
Cd Length: 405
Bit Score: 458.65
E-value: 1.73e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 24 AGG D S K R V P W A NPM GK V F LP LP Y laa D DP D GPV PL L F D HI LAI A S CARQ af QDQG G LFIMTG DV LPC FDA FKMTLPEDAA 103
Cdd:pfam07959 1 AGG Y S Q R L P S A SAL GK I F TA LP L --- E DP G GPV YQ L L D LK LAI Y S DFPS -- RMKP G VLVCST DV ILL FDA NEISFDKPGV 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 104 SIVTV P IT L D I AS NHGV I V TSKSE S LAESYTVS L VN D L L Q KP TV E D L VKKD A I L H DG RTL LD T GI ISAR G RAWSD L V AL G 183
Cdd:pfam07959 76 TALAH P SS L A I GT NHGV F V LDPQG S SEKDLEIG L CR D F L H KP SE E E L QASG A V L K DG FVY LD S GI VFFD G KTAEK L L AL Y 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 184 C S CQ P MIL E LIGSKKEMS LY E D LVA A WV P SRHDWLRT ------------ RP LG E L L VNS L GRQKMYSY C TYDLQ F L HFGT 251
Cdd:pfam07959 156 V S PG P LDC E TYLGPLQID LY G D FLQ A LG P GATLEYFL ntanvgkeeasl RP AR E E L WKL L RGTPLNVI C LPNSK F Y HFGT 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 252 SS E V L D HL S GD A S GI V GR rhlc SIPA T TV S D IA ------ A SSVILS S EIA PGVS I G ED S L I YDSTVS G A V Q IGS QS I VV G 325
Cdd:pfam07959 236 TA E Y L E HL T GD C S LR V EL ---- GLTS T AF S V IA narqlk A GASVIN S VLE PGVS V G PG S V I EYCHLG G P V S IGS GC I LS G 311
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 326 IHIP S ED lgtpes F R FM LPD RHC L WEV PL VGHK G -- R V I V YC G L HDN P K N S IH - KDG TF C GKPLE KV L FDL GI EES DLW S 402
Cdd:pfam07959 312 LDLS S SL ------ A R LE LPD DTF L HTL PL KLGG G kl Y V T V VF G I HDN L K S S VS d GNL TF L GKPLE DF L SLT GI QPE DLW F 385
410 420
....*....|....*....|
gi 1063679130 403 S YVAQDRC LWNA K LFP ILTY 422
Cdd:pfam07959 386 S GEPREKS LWNA R LFP VCHD 405
fkp
PRK13412 bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
19-935
9.49e-99
bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
Pssm-ID: 237379 [Multi-domain]
Cd Length: 974
Bit Score: 332.18
E-value: 9.49e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 19 VLM LHAGG D S K R V P WAN P M GK VFL P L P YLAA ddpd GPVPL L FDHI L AIASCARQAFQDQG ---- GLF I MT GDV LPCFDAF 94
Cdd:PRK13412 94 RIL LHAGG Q S R R L P GYA P S GK ILT P V P VFRW ---- ERGQR L SQNL L SLQLPLYERIMSKA pegl HTL I AS GDV YIRSEQP 169
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 95 KMTL PE da A SI V TVPITL D -- I A S NHGV I V T S KS eslaesy TVSLVNDL LQKP TV E D L vkk DAILHDGRT L L D T GI ISAR 172
Cdd:PRK13412 170 LQDI PE -- A DV V CYGLWV D ps L A T NHGV F V S S RK ------- SPERLDFM LQKP SL E E L --- GGLSKTHLF L M D I GI WLLS 237
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 173 G RA WSD L VALG cscqpm IL E LI G SK K EMS LY E D LVA A ---- WVPSRHD wlrtrp L GE L L V NS L GRQKM ysyctydl Q F L H 248
Cdd:PRK13412 238 D RA VEL L MKRS ------ GK E DG G KL K YYD LY S D FGL A lgth PRIGDDE ------ L NA L S V AI L PLPGG -------- E F Y H 297
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 249 F GTS S E VLD ------ H L SG D ASG I VG R R hlcsipattv SDIAASSVILSSEIAPGVSIGEDS L - I YD S T V SGAVQIG S Q S 321
Cdd:PRK13412 298 Y GTS R E LIS stlavq N L VT D QRR I MH R K ---------- VKPHPAMFVQNAVLSGKLTAENAT L w I EN S H V GEGWKLA S R S 367
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 322 I VV G I hipsedlgt PE - S FRFM LP DRH C LWE VP l VG HK G R V IVYC GL H D NP K NSIHKD - G T FC G K P LEKVLFDL G IEES D 399
Cdd:PRK13412 368 I IT G V --------- PE n S WNLD LP EGV C IDV VP - VG DR G F V ARPY GL D D VF K GALADG k T T WF G R P FLEWMEAR G LSWP D 437
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 400 L wssy VAQDRC L WN A K LFP IL T YS E M L - KLAS W LMGLDDS rn K E KIKL W RS S QRV S LE E L hgsinfpemcngss NHQ A D L 478
Cdd:PRK13412 438 L ---- KGRTDD L QA A H LFP VV T SV E E L g AVLR W MLSEPSL -- E E GKEI W LR S EKL S AD E I -------------- SAY A N L 497
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 479 A GGI A KAC ---- M N YGM L GR N LSQLCHEI L QKESLGLEICKNF LD QCPKFQ E QN ski LPKS R ayqvevdl LRACGDE A KA 554
Cdd:PRK13412 498 A RLY A QRE afrk A N WRA L AA N HEKSVFYQ L DLADAAEDFVRLL LD MPEILP E DA --- PLML R -------- IHNRMFR A RI 566
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 555 IE L EHK vwg AVA EE TAS A V R Y g F R EH LL ESSGKSHSENHIS hpdr V FQPRRTKVEL PVR V D FV GGW S DTPP WS L ERA G Y V 634
Cdd:PRK13412 567 LK L SGA --- RYR EE EQA A F R L - L R DG LL DGAYPRKQTPKLE ---- V YSDQIVWGRS PVR I D LA GGW T DTPP YC L YSG G N V 638
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 635 L N M AI T L E G SL P IGTIIETTNQMG I SIQ - D D A G NELHIEDPISIKTPFE V ND PF RLV K S AL LVT G IVQENFVD S ------ 707
Cdd:PRK13412 639 V N L AI E L N G QP P LQVYVKPCSEPH I VLR s I D L G AMEVVRTNEELRDYKK V GS PF SIP K A AL CLA G FAPRFSAE S yaslee 718
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 708 ------ T G LA I KTW A NV P R GSGLGTSSILAA A V VKGLLQIS n G DESNE N - I ARLV LVLEQL MG TGGGWQDQ I GG LY PG I K 780
Cdd:PRK13412 719 qlkafg S G IE I TLL A AI P A GSGLGTSSILAA T V LGAISDFC - G LAWDK N e I CNRT LVLEQL LT TGGGWQDQ Y GG VL PG V K 797
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 781 FTSSFP G IPMRLQ V VP L LA S PQLIS E LEQRL L VVF TG QV R L A HQV L HKV V TRYLQRDNLLISSIKRLTEL A KSGR EA LMN 860
Cdd:PRK13412 798 LLQTGA G FAQSPL V RW L PD S LFTQP E YRDCH L LYY TG IT R T A KGI L AEI V RSMFLNSTAHLQLLHEMKAH A LDMY EA IQR 877
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063679130 861 C E VD E V G DIMSEA W RLHQE LD PYCSNEF V DKLF E FSQP Y SS G F KL V GAGGGG FSLIL AKD AEK A KEL R QR L E E H A 935
Cdd:PRK13412 878 G E FE E F G RLVGKT W EQNKA LD SGTNPAA V EAII E LIKD Y TL G Y KL P GAGGGG YLYMV AKD PGA A ERI R KI L T E N A 952
COG2605
COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction ...
611-934
7.02e-62
Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only];
Pssm-ID: 442017 [Multi-domain]
Cd Length: 328
Bit Score: 213.12
E-value: 7.02e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 611 P V R VD F V GG WS D T PP WS LE RA G Y VLN M AI tleg SLPIGTII E TTNQMG I SIQ - D D AGNELHIEDPIS I ktpfevnd P FRL 689
Cdd:COG2605 6 P L R IS F A GG GT D L PP YY LE HG G A VLN A AI ---- DKYAYVTL E PRFDGK I RLS s S D TERVETVDEDDD I -------- P HPV 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 690 VKS AL LVT GI vqenfvd ST GL A I K T WANV P R GSGLG T SS I L AA A VVKG L LQISNGDE S NENI ARL VLVL E Q - LM G TG GG W 768
Cdd:COG2605 74 IRE AL KLF GI ------- GD GL E I T T DSDA P A GSGLG S SS A L TV A LLNA L HALLGLPL S PYDL ARL AYEI E R n DL G EP GG K 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 769 QDQ IGGLYP G IK F TSSF P G ip M R LQ V V PL LA SP QLIS ELE QR LL VVF TG QV R LAHQV L HKV V TRYLQR D NLLISSIKRLT 848
Cdd:COG2605 147 QDQ YAAAFG G FN F IEFG P D -- G R VI V N PL RI SP EILN ELE SN LL LFY TG IT R ESSDI L KEQ V KNVEDG D EATLEALHEMK 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 849 ELA KSGR EAL MNCEV DE V G DIMS E A W R L HQE L DPYC SN EFV D KLF E FS - QPYSS G F KL V GAGGGGF S L IL A KD a E KAKEL 927
Cdd:COG2605 225 ELA LEMK EAL LKGDL DE F G ELLN E G W E L KKR L ASGI SN PAI D EIY E LA r KAGAL G G KL L GAGGGGF L L FY A PP - E RREAV 303
....*..
gi 1063679130 928 R QR L EEH 934
Cdd:COG2605 304 R EA L SKA 310
ERG12
COG1577 Mevalonate kinase [Lipid transport and metabolism]; Mevalonate kinase is part of the Pathway ...
659-918
1.97e-17
Mevalonate kinase [Lipid transport and metabolism]; Mevalonate kinase is part of the Pathway/BioSystem: Isoprenoid biosynthesis
Pssm-ID: 441185 [Multi-domain]
Cd Length: 277
Bit Score: 83.35
E-value: 1.97e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 659 ISIQ DD AGNELHIE D - PISIKTPFEVNDPF R LV K S A L lvt GIVQ E NF - VDST G LA I KTWANV PR GS GLG T S SIL A A AV VK 736
Cdd:COG1577 32 VEPS DD DKLRIESP D l GGTLDLDPLADAAL R YI K A A I --- EAAL E YL g LPLK G FD I EIDSEI PR KR GLG S S AAV A V AV IR 108
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 737 G L LQISNGDE S N E NIAR L V L VL E QLM - G TGG G w Q D Q igglypgik FT S SFP G i P MRL Q vvplla SPQLISE LE Q ---- R L 811
Cdd:COG1577 109 A L AAFYGVEL S K E ELFK L A L EA E KIV h G NPS G - L D T --------- AA S TYG G - P IYY Q ------ RGDRAEP LE L pknl P L 171
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 812 L V VF TG QVRLAHQVLH KV VTRYLQRDN L LISSIKRLTE L AKSGR EAL MNCEVDEV G DI M S E AWR L HQE L D py C S NEFV D K 891
Cdd:COG1577 172 V V GD TG VPASTKELVA KV RKLKERNPE L YEAFLEEIGD L VEEAI EAL EEGDLEAL G EL M N E NHG L LRA L G -- V S TPEL D R 249
250 260
....*....|....*....|....*...
gi 1063679130 892 L F E FSQPYS - S G F KL V GAGGGG FSLI LA 918
Cdd:COG1577 250 L V E AARKAG a L G A KL T GAGGGG CVIA LA 277
mevalon_kin
TIGR00549 mevalonate kinase; This model represents mevalonate kinase, the third step in the mevalonate ...
717-917
5.44e-10
mevalonate kinase; This model represents mevalonate kinase, the third step in the mevalonate pathway of isopentanyl pyrophosphate (IPP) biosynthesis. IPP is a common intermediate for a number of pathways including cholesterol biosynthesis. This model covers enzymes from eukaryotes, archaea and bacteria. The related enzyme from the same pathway, phosphmevalonate kinase, serves as an outgroup for this clade. Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped. [Central intermediary metabolism, Other]
Pssm-ID: 273130 [Multi-domain]
Cd Length: 273
Bit Score: 61.15
E-value: 5.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 717 NV P R G S GLG T S SIL A A A VVKG L LQISNGDE S N E NI A R L VLVL E QLM - G TGG G WQDQI --- GG L ypg IK F TSSFP gipmrl 792
Cdd:TIGR00549 86 EI P P G R GLG S S AAV A V A LIRA L ADYFGSEL S K E EL A E L ANEA E KIA h G KPS G IDTAT sts GG P --- VY F EKGEG ------ 156
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 793 q VVPL L A S PQL iseleq RLLVVF TG QVRLAHQVLHK V VTRYLQRDN L LI S SIKRLT EL AKSGRE AL MNCE V DEV G DI M SE 872
Cdd:TIGR00549 157 - EFTK L I S LDG ------ YFVIAD TG VSGSTKEAVAR V RQLLERFPE L ID S IMDAIG EL TLEAKA AL QDGD V ESL G EL M NI 229
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1063679130 873 AWR L HQE L D py C S NEFV D K L F E FSQPYSS - G F KL V GAGGGG FSLI L 917
Cdd:TIGR00549 230 NQG L LKA L G -- V S HPKL D Q L V E IARKAGA l G A KL T GAGGGG CMIA L 273
GHMP_kinases_C
pfam08544 GHMP kinases C terminal; This family includes homoserine kinases, galactokinases and ...
855-936
3.85e-09
GHMP kinases C terminal; This family includes homoserine kinases, galactokinases and mevalonate kinases.
Pssm-ID: 430063 [Multi-domain]
Cd Length: 85
Bit Score: 54.40
E-value: 3.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 855 R EAL MNCEVD E V G DIMS E AWRLHQE L DPY - CSNEFV D K L F E FSQPYSS G F KL V G A GGG GFSLI L A KD AEK A K E LRQR L E E 933
Cdd:pfam08544 2 L EAL LRGDLE E L G KLLT E SAESLEP L LVV g ILPPEL D E L L E ALLELGL G A KL S G S GGG PTVFA L F KD EDD A E E VARA L R E 81
...
gi 1063679130 934 HAE 936
Cdd:pfam08544 82 AGK 84
PRK03817
PRK03817 galactokinase; Provisional
606-933
8.46e-08
galactokinase; Provisional
Pssm-ID: 235163 [Multi-domain]
Cd Length: 351
Bit Score: 55.39
E-value: 8.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 606 T KV EL P V RV DFV G GWS D tpp WSL era GYVL NM AI T L egslpi G T II E TTNQMGISIQDDAG NE lhiedpisi KTP FE VND 685
Cdd:PRK03817 1 M KV KS P G RV NLI G EHT D --- YND --- GYVL PF AI N L ------ Y T FL E IEKSEKFIFYSENF NE --------- EKT FE LDK 59
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 686 PFR L VKS A LLVT G I --- VQENFVDST G LAI K TWA N V P R G S GL GT S SI L AA AV VKG L LQIS N GDE S NENI A R L VLVL E - QL 761
Cdd:PRK03817 60 LEK L NSW A DYIK G V iwv LEKRGYEVG G VKG K VSS N L P I G A GL SS S AS L EV AV AYA L NEAY N LNL S KLEL A L L AREA E n EF 139
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 762 M G TGG G WQ DQ igglypgik F TSS F --------- PGIPMRLQV VP L las P QLIS eleqr L LV VF TG --------------- 817
Cdd:PRK03817 140 V G VPC G IM DQ --------- F AVA F gkkdhaifl DTMTLEYEY VP F --- P EDYE ----- I LV FD TG vkrelasseynerrq 202
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 818 QVRL A HQV L H K VVTRYLQRDN L -- L ISSIKR ----- L T E LAK -- SG R E AL MNCEVDEV G DIMS E A wrl H QE L - D P Y - C S N 886
Cdd:PRK03817 203 ECEE A LKI L G K KSSKEVTEED L sk L PPLLRK ragyv L R E NER vl KV R D AL KEGDIETL G ELLT E S --- H WD L a D N Y e V S C 279
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1063679130 887 E FV D KLF EF SQPYSS - G FK L V GAG G GG f S L I LAK D AE K AKELRQR L E E 933
Cdd:PRK03817 280 E EL D FFV EF ALELGA y G AR L T GAG F GG - S A I ALV D KG K FESIGEE L L E 326
GHMP_kinases_N
pfam00288 GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and ...
712-778
1.09e-07
GHMP kinases N terminal domain; This family includes homoserine kinases, galactokinases and mevalonate kinases.
Pssm-ID: 395225 [Multi-domain]
Cd Length: 64
Bit Score: 49.47
E-value: 1.09e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063679130 712 I KTWA N V P R G S GLG T S SI LA A A VVKG L LQI sngde SNENI A R L V L VL E Q L M G T G - GG WQ D QIGG LY P G 778
Cdd:pfam00288 2 I EIES N I P L G A GLG S S AA LA V A LLLA L NEL ----- FGLPL A K L A L EA E E L A G G G r GG GM D VAAS LY G G 64
PTZ00298
PTZ00298 mevalonate kinase; Provisional
846-947
5.02e-03
mevalonate kinase; Provisional
Pssm-ID: 240351 [Multi-domain]
Cd Length: 328
Bit Score: 40.22
E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063679130 846 RLTELAKSGR EAL MNCEVDE VG DI M SEAWR L H Q E L DPY C SN ef V D KLFEFSQP Y SS - G F K LV G A G G GG FSLI LA KDAEK - 923
Cdd:PTZ00298 222 NYNACVSEAK EAL QKGNLFR VG EL M NANHD L C Q K L TVS C RE -- L D SIVQTCRT Y GA l G A K MS G T G R GG LVVA LA ASEDQ r 299
90 100
....*....|....*....|....*..
gi 1063679130 924 --- AK EL R Q R LE E h A E F dvk V YNWSIC 947
Cdd:PTZ00298 300 dai AK AV R A R CP E - A K F --- V WRYTVQ 322
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
