|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1-1262 |
1.01e-132 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 437.00 E-value: 1.01e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1 MASSSSSPIWKYDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKkLELGDSISEEISRAIQNSTYALVILSENYASS 80
Cdd:PLN03210 2 ASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNE-IERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 81 SWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQTGSF--TFDKYQDSKMPNKVTTWREALTQIASLAGKDFETCEDE 158
Cdd:PLN03210 81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFgeAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 159 ASMIEEIVKDISKKLLIMQPVDFSDIVGMNAHMERLSPLLSMDSEnEVRMIGIWGMGGIGKTTIAKCLFDQFSQGFPA-- 236
Cdd:PLN03210 161 AKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSsv 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 237 ---RCFLENVSKIYRKGGVSS------LAEKFLSTTLGlsKKKMKGSgvKLGPQEikARFGCRKVFVVLDNVDDMRQMHA 307
Cdd:PLN03210 240 fidRAFISKSMEIYSSANPDDynmklhLQRAFLSEILD--KKDIKIY--HLGAME--ERLKHRKVLIFIDDLDDQDVLDA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 308 FAQESSWFGPGSRIIITTRDKGLLNTYGVRTVYEVKCMDNDAALQLFNQLAFKGALPPSELYEkLSIRASWLAQGLPVAI 387
Cdd:PLN03210 314 LAGQTQWFGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFME-LASEVALRAGNLPLGL 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 388 EAYGLFFRRMtSLKEWDDALCRFIEAPDESVMEILKISYDGL-EETDKNVFLHVACLFNGEPLRRATTLLDDGVLQGCLG 466
Cdd:PLN03210 393 NVLGSYLRGR-DKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLnNKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIG 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 467 LKILAEKSLIEITASgYIKMHNLVDQTARAIVNQESMQRRHgRGVLWNPYEIYELLKRNTTSEPTNCMALHM--CDMVYa 544
Cdd:PLN03210 472 LKNLVDKSLIHVRED-IVEMHSLLQEMGKEIVRAQSNEPGE-REFLVDAKDICDVLEDNTGTKKVLGITLDIdeIDELH- 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 545 LHLGGYTAYHDTLkFLKIY---------------KHSNHIKSKLLFsgddtnllssrlrlLHWDAFPLTTFPCRFQPQDL 609
Cdd:PLN03210 549 IHENAFKGMRNLL-FLKFYtkkwdqkkevrwhlpEGFDYLPPKLRL--------------LRWDKYPLRCMPSNFRPENL 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 610 VEIILHRSNLTSFWKETVGMPNLRRLDLSDSENLEQLPDLSMAVNLEELITQGCKRLKKIPESISYLTRLTTLDVSYCEE 689
Cdd:PLN03210 614 VKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCEN 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 690 LASYITIRELNRSGRqiaLYFSGkevetrsIANLSIGGNIHIQMFWLDgnvdhLSFTTEQQGPDKLtkkekqqapgeltk 769
Cdd:PLN03210 694 LEILPTGINLKSLYR---LNLSG-------CSRLKSFPDISTNISWLD-----LDETAIEEFPSNL-------------- 744
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 770 reqQQEPRKKTILCGFGSlmrkgrkvkatsefldhewmmqrdqlapdnqqalefstrtrqalqflpefhgqesvKKAQGK 849
Cdd:PLN03210 745 ---RLENLDELILCEMKS--------------------------------------------------------EKLWER 765
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 850 SQPTSKFHGFTSVDISRFrYSSDGASFLcfslsmfpcvkelilinlnikvipddvcglkflekldwsgndfeTLPETMNQ 929
Cdd:PLN03210 766 VQPLTPLMTMLSPSLTRL-FLSDIPSLV--------------------------------------------ELPSSIQN 800
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 930 LPRLKYASFRNCCRLKALPalvqletiklSGcINLQSLLELSYAeqdcgrfqwlelwvdGCKSIRSILDQLRHfikLSYL 1009
Cdd:PLN03210 801 LHKLEHLEIENCINLETLP----------TG-INLESLESLDLS---------------GCSRLRTFPDISTN---ISDL 851
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1010 DLSSHEFEKLPSSIEVLSSLRTLCLNKCKKLKSIEGLPLCLKSLYA---HGCEILETVSL-------PLNHSVKH----- 1074
Cdd:PLN03210 852 NLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETvdfSDCGALTEASWngspsevAMATDNIHsklps 931
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1075 ---LDLSHCFGLKRDEHLIAQFLnegeneeesLGFAFFPGTEVPSYFDHIDKGKSLT-IDLPQIWPSPKLLGFDACVVIA 1150
Cdd:PLN03210 932 tvcINFINCFNLDQEALLQQQSI---------FKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPFFRFRACAVVD 1002
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1151 CER------PFDIQFSPFSYDwdwgyeRYFCLYLKPDFHSTDPSTEdeeevvKSDHLLIIRGLKNFSNQINKLGI----K 1220
Cdd:PLN03210 1003 SESffiisvSFDIQVCCRFID------RLGNHFDSPYQPHVFSVTK------KGSHLVIFDCCFPLNEDNAPLAElnydH 1070
|
1290 1300 1310 1320
....*....|....*....|....*....|....*....|..
gi 1063696589 1221 SDLQFSEELKSPSAKLQSCGIRLIWEVGQADKSIEGEELPLS 1262
Cdd:PLN03210 1071 VDIQFRLTNKNSQLKLKGCGIRLSEDDSSLNNTLPNVEEADD 1112
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
12-176 |
5.23e-55 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 188.73 E-value: 5.23e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 12 YDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALVILSENYASSSWCLDELRMVM 91
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 92 DLHLKNKIKVVPIFYGVDPSHVRHQTGSF--TFDKYQDSKMPNKVTTWREALTQIASLagKDFETCEDEASMIEEIVKDI 169
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFgkAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*..
gi 1063696589 170 SKKLLIM 176
Cdd:pfam01582 159 SNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
11-147 |
2.73e-36 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 133.99 E-value: 2.73e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 11 KYDVFLSFRG-EDTRKNIVSHLHKQLVDKGVVTFKDDKklELGDSISEEISRAIQNSTYALVILSENYASSSWCLDELRM 89
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDF--EPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063696589 90 VMDLHLK-NKIKVVPIFYGVDPSHVRHQTGSFTFDK---YQDSKMPNKVTTWREALTQIASL 147
Cdd:smart00255 79 ALENALEeGGLRVIPIFYEVIPSDVRKQPGKFRKVFkknYLKWPEDEKEQFWKKALYAVPSK 140
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
878-1079 |
3.21e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 3.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 878 CFSLSMFPCVKELILINLNIKVIPDDVCGLKFLEKLDWSGNDFETLPETMNQLPRLKYASFRNcCRLKALPAlvqletiK 957
Cdd:COG4886 106 NEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSN-NQLTDLPE-------E 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 958 LSGCINLQsllelsyaeqdcgrfqwlELWVDGCKsIRSILDQLRHFIKLSYLDLSSHEFEKLPSSIEVLSSLRTLCLNKC 1037
Cdd:COG4886 178 LGNLTNLK------------------ELDLSNNQ-ITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNN 238
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1063696589 1038 K--KLKSIEGLPLcLKSLYAHGCEILETVSLPLNHSVKHLDLSH 1079
Cdd:COG4886 239 QltDLPELGNLTN-LEELDLSNNQLTDLPPLANLTNLKTLDLSN 281
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
1-1262 |
1.01e-132 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 437.00 E-value: 1.01e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1 MASSSSSPIWKYDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKkLELGDSISEEISRAIQNSTYALVILSENYASS 80
Cdd:PLN03210 2 ASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNE-IERSQSLDPELKQAIRDSRIAVVVFSKNYASS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 81 SWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQTGSF--TFDKYQDSKMPNKVTTWREALTQIASLAGKDFETCEDE 158
Cdd:PLN03210 81 SWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFgeAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPNE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 159 ASMIEEIVKDISKKLLIMQPVDFSDIVGMNAHMERLSPLLSMDSEnEVRMIGIWGMGGIGKTTIAKCLFDQFSQGFPA-- 236
Cdd:PLN03210 161 AKMIEEIANDVLGKLNLTPSNDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSsv 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 237 ---RCFLENVSKIYRKGGVSS------LAEKFLSTTLGlsKKKMKGSgvKLGPQEikARFGCRKVFVVLDNVDDMRQMHA 307
Cdd:PLN03210 240 fidRAFISKSMEIYSSANPDDynmklhLQRAFLSEILD--KKDIKIY--HLGAME--ERLKHRKVLIFIDDLDDQDVLDA 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 308 FAQESSWFGPGSRIIITTRDKGLLNTYGVRTVYEVKCMDNDAALQLFNQLAFKGALPPSELYEkLSIRASWLAQGLPVAI 387
Cdd:PLN03210 314 LAGQTQWFGSGSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFME-LASEVALRAGNLPLGL 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 388 EAYGLFFRRMtSLKEWDDALCRFIEAPDESVMEILKISYDGL-EETDKNVFLHVACLFNGEPLRRATTLLDDGVLQGCLG 466
Cdd:PLN03210 393 NVLGSYLRGR-DKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLnNKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIG 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 467 LKILAEKSLIEITASgYIKMHNLVDQTARAIVNQESMQRRHgRGVLWNPYEIYELLKRNTTSEPTNCMALHM--CDMVYa 544
Cdd:PLN03210 472 LKNLVDKSLIHVRED-IVEMHSLLQEMGKEIVRAQSNEPGE-REFLVDAKDICDVLEDNTGTKKVLGITLDIdeIDELH- 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 545 LHLGGYTAYHDTLkFLKIY---------------KHSNHIKSKLLFsgddtnllssrlrlLHWDAFPLTTFPCRFQPQDL 609
Cdd:PLN03210 549 IHENAFKGMRNLL-FLKFYtkkwdqkkevrwhlpEGFDYLPPKLRL--------------LRWDKYPLRCMPSNFRPENL 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 610 VEIILHRSNLTSFWKETVGMPNLRRLDLSDSENLEQLPDLSMAVNLEELITQGCKRLKKIPESISYLTRLTTLDVSYCEE 689
Cdd:PLN03210 614 VKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCEN 693
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 690 LASYITIRELNRSGRqiaLYFSGkevetrsIANLSIGGNIHIQMFWLDgnvdhLSFTTEQQGPDKLtkkekqqapgeltk 769
Cdd:PLN03210 694 LEILPTGINLKSLYR---LNLSG-------CSRLKSFPDISTNISWLD-----LDETAIEEFPSNL-------------- 744
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 770 reqQQEPRKKTILCGFGSlmrkgrkvkatsefldhewmmqrdqlapdnqqalefstrtrqalqflpefhgqesvKKAQGK 849
Cdd:PLN03210 745 ---RLENLDELILCEMKS--------------------------------------------------------EKLWER 765
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 850 SQPTSKFHGFTSVDISRFrYSSDGASFLcfslsmfpcvkelilinlnikvipddvcglkflekldwsgndfeTLPETMNQ 929
Cdd:PLN03210 766 VQPLTPLMTMLSPSLTRL-FLSDIPSLV--------------------------------------------ELPSSIQN 800
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 930 LPRLKYASFRNCCRLKALPalvqletiklSGcINLQSLLELSYAeqdcgrfqwlelwvdGCKSIRSILDQLRHfikLSYL 1009
Cdd:PLN03210 801 LHKLEHLEIENCINLETLP----------TG-INLESLESLDLS---------------GCSRLRTFPDISTN---ISDL 851
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1010 DLSSHEFEKLPSSIEVLSSLRTLCLNKCKKLKSIEGLPLCLKSLYA---HGCEILETVSL-------PLNHSVKH----- 1074
Cdd:PLN03210 852 NLSRTGIEEVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETvdfSDCGALTEASWngspsevAMATDNIHsklps 931
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1075 ---LDLSHCFGLKRDEHLIAQFLnegeneeesLGFAFFPGTEVPSYFDHIDKGKSLT-IDLPQIWPSPKLLGFDACVVIA 1150
Cdd:PLN03210 932 tvcINFINCFNLDQEALLQQQSI---------FKQLILSGEEVPSYFTHRTTGASLTnIPLLHISPCQPFFRFRACAVVD 1002
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1151 CER------PFDIQFSPFSYDwdwgyeRYFCLYLKPDFHSTDPSTEdeeevvKSDHLLIIRGLKNFSNQINKLGI----K 1220
Cdd:PLN03210 1003 SESffiisvSFDIQVCCRFID------RLGNHFDSPYQPHVFSVTK------KGSHLVIFDCCFPLNEDNAPLAElnydH 1070
|
1290 1300 1310 1320
....*....|....*....|....*....|....*....|..
gi 1063696589 1221 SDLQFSEELKSPSAKLQSCGIRLIWEVGQADKSIEGEELPLS 1262
Cdd:PLN03210 1071 VDIQFRLTNKNSQLKLKGCGIRLSEDDSSLNNTLPNVEEADD 1112
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
12-176 |
5.23e-55 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 188.73 E-value: 5.23e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 12 YDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALVILSENYASSSWCLDELRMVM 91
Cdd:pfam01582 1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 92 DLHLKNKIKVVPIFYGVDPSHVRHQTGSF--TFDKYQDSKMPNKVTTWREALTQIASLagKDFETCEDEASMIEEIVKDI 169
Cdd:pfam01582 81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFgkAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDI 158
|
....*..
gi 1063696589 170 SKKLLIM 176
Cdd:pfam01582 159 SNKLNGT 165
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
11-147 |
2.73e-36 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 133.99 E-value: 2.73e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 11 KYDVFLSFRG-EDTRKNIVSHLHKQLVDKGVVTFKDDKklELGDSISEEISRAIQNSTYALVILSENYASSSWCLDELRM 89
Cdd:smart00255 1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDF--EPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063696589 90 VMDLHLK-NKIKVVPIFYGVDPSHVRHQTGSFTFDK---YQDSKMPNKVTTWREALTQIASL 147
Cdd:smart00255 79 ALENALEeGGLRVIPIFYEVIPSDVRKQPGKFRKVFkknYLKWPEDEKEQFWKKALYAVPSK 140
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
14-112 |
3.02e-19 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 84.67 E-value: 3.02e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 14 VFLSFRGEDtrKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALVILSENYASSSWCLDELRMVMDL 93
Cdd:pfam13676 1 VFISYAGED--RAWAEWLADALEAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78
|
90
....*....|....*....
gi 1063696589 94 HLKNKiKVVPIFYGVDPSH 112
Cdd:pfam13676 79 PEGRK-RLIPVRLECDLEL 96
|
|
| PLN03194 |
PLN03194 |
putative disease resistance protein; Provisional |
4-114 |
2.02e-16 |
|
putative disease resistance protein; Provisional
Pssm-ID: 215626 [Multi-domain] Cd Length: 187 Bit Score: 78.71 E-value: 2.02e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 4 SSSSPIWKYDVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALVILSENYASSSWC 83
Cdd:PLN03194 19 SSSSSAKPCDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKNMKPGDKLFDKINSAIRNCKVGVAVFSPRYCESYFC 98
|
90 100 110
....*....|....*....|....*....|.
gi 1063696589 84 LDELRMVMdlhlKNKIKVVPIFYGVDPSHVR 114
Cdd:PLN03194 99 LHELALIM----ESKKRVIPIFCDVKPSQLR 125
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
878-1079 |
3.21e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.51 E-value: 3.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 878 CFSLSMFPCVKELILINLNIKVIPDDVCGLKFLEKLDWSGNDFETLPETMNQLPRLKYASFRNcCRLKALPAlvqletiK 957
Cdd:COG4886 106 NEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSN-NQLTDLPE-------E 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 958 LSGCINLQsllelsyaeqdcgrfqwlELWVDGCKsIRSILDQLRHFIKLSYLDLSSHEFEKLPSSIEVLSSLRTLCLNKC 1037
Cdd:COG4886 178 LGNLTNLK------------------ELDLSNNQ-ITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNN 238
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1063696589 1038 K--KLKSIEGLPLcLKSLYAHGCEILETVSLPLNHSVKHLDLSH 1079
Cdd:COG4886 239 QltDLPELGNLTN-LEELDLSNNQLTDLPPLANLTNLKTLDLSN 281
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
851-1095 |
2.60e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 70.35 E-value: 2.60e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 851 QPTSKFHGFTSVDISRFRYSSdgasfLCFSLSMFPCVKELILINLNIKVIPDDVCGLKFLEKLDWSGNDFETLPETMNQL 930
Cdd:COG4886 107 EELSNLTNLESLDLSGNQLTD-----LPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 931 PRLKYASFRNcCRLKALPAlvqletiKLSGCINLQSLL----ELSYAEQDCGRFQWLE-LWVDGCKsIRSiLDQLRHFIK 1005
Cdd:COG4886 182 TNLKELDLSN-NQITDLPE-------PLGNLTNLEELDlsgnQLTDLPEPLANLTNLEtLDLSNNQ-LTD-LPELGNLTN 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1006 LSYLDLSSHEFEKLPSSIEvLSSLRTLCLNKCK----KLKSIEGL-PLCLKSLYAHGCEILETVSLPLNHSVKHLDLSHC 1080
Cdd:COG4886 252 LEELDLSNNQLTDLPPLAN-LTNLKTLDLSNNQltdlKLKELELLlGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLL 330
|
250
....*....|....*
gi 1063696589 1081 FGLKRDEHLIAQFLN 1095
Cdd:COG4886 331 KGLLVTLTTLALSLS 345
|
|
| COG4916 |
COG4916 |
Uncharacterized conserved protein [Function unknown]; |
12-129 |
8.33e-12 |
|
Uncharacterized conserved protein [Function unknown];
Pssm-ID: 443944 [Multi-domain] Cd Length: 236 Bit Score: 66.68 E-value: 8.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 12 YDVFLSFRGEDtrKNIVSHLHKQLVDKGVVTFKD-DKKLEL-GDSISEEISRAIQN-STYALVILSENYASSSWCLDELR 88
Cdd:COG4916 1 YDVALSFAGED--REFVERVAEALKARGIKVFYDeNEEAELwGKDLDEYLQDIYRSeSRFVVVFLSKDYVEKKWTGLERR 78
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1063696589 89 MVMDLHLKNKIK-VVPIFygVDPSHVrhqTGSFTFDKYQDSK 129
Cdd:COG4916 79 AALARAMQRKKEyILPIR--LDDTEI---PGILATIGYIDLR 115
|
|
| C-JID |
pfam20160 |
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ... |
1109-1246 |
1.34e-10 |
|
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.
Pssm-ID: 466313 Cd Length: 108 Bit Score: 59.77 E-value: 1.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 1109 FPGTEVPSYFDHIDKGKSLTIDLPQIWPSPKLLGFDACVViacerpFDIQFSPFSYDWdwgyerYFCLYLKPDFHSTDPS 1188
Cdd:pfam20160 1 LPGSQIPEWFNHQSTGSSISIKLPENWYNDNFLGFAVCAV------GSLIPSLHNFLG------YIHFFLIPLVSLWDTS 68
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1063696589 1189 TEDEeevvksdhlliirglKNFSNQINklgiksdLQFSEELKSPSAKLQSCGIRLIWE 1246
Cdd:pfam20160 69 KANG---------------KTPNDYGR-------IEASFEFPSDLHEIKQCGVRLIYK 104
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
888-1080 |
6.71e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.56 E-value: 6.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 888 KELILINLNIKVIPDDVCGLKFLEKLDWSGNDFETLPETMNQLPRLKYASFRNCCRLKALPALVQLETIKLSGCiNLQSL 967
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGN-QLTDL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 968 lelsyaEQDCGRFQWLE-LWVDGCKsIRSILDQLRHFIKLSYLDLSSHEFEKLPSSIEVLSSLRTLCLNKCKklksIEGL 1046
Cdd:COG4886 129 ------PEELANLTNLKeLDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQ----ITDL 197
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1063696589 1047 PLC------LKSLYAHGCEIlETVSLPLN--HSVKHLDLSHC 1080
Cdd:COG4886 198 PEPlgnltnLEELDLSGNQL-TDLPEPLAnlTNLETLDLSNN 238
|
|
| NB-ARC |
pfam00931 |
NB-ARC domain; |
219-427 |
2.03e-08 |
|
NB-ARC domain;
Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 56.62 E-value: 2.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 219 KTTIAKCLFDQFSQ---GFPARCFLEnVSKIYRKGGV-SSLAEKFLSTTLGLSKKkmkgsgvklgPQEIKARFGCR---- 290
Cdd:pfam00931 31 KTTLAAQIFNDFDEvegHFDSVAWVV-VSKTFTISTLqQTILQNLGLSEDDWDNK----------EEGELARKIRRallt 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 291 -KVFVVLDNVDDMRQMHAFAQESSWFGPGSRIIITTRDKGLLNTYGVR-TVYEVKCMDNDAALQLFNQLAFKGALPPSEL 368
Cdd:pfam00931 100 kRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTRSEEVAGRVGGPsDPHEVELLEPDEAWELFENKVFPKTLGECEL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063696589 369 YEKLSIRASWLAQGLPVAIEAYGLFFRRMTSLKEWD---DALCRFIEAPD---ESVMEILKISYD 427
Cdd:pfam00931 180 LEDVAKEIVEKCRGLPLALKVLGGLLSCKKTVEEWKhvyDVLQSELKSNSyslNSVRSILQLSYE 244
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
604-706 |
1.89e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 54.94 E-value: 1.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 604 FQPQDLVEIILHRSNLTSFWKETVGMPNLRRLDLSDSeNLEQLPD-LSMAVNLEELITQGCKrLKKIPESISYLTRLTTL 682
Cdd:COG4886 110 SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNN-QLTDLPEpLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKEL 187
|
90 100 110
....*....|....*....|....*....|
gi 1063696589 683 DVSYC------EELASYITIRELNRSGRQI 706
Cdd:COG4886 188 DLSNNqitdlpEPLGNLTNLEELDLSGNQL 217
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
609-757 |
4.13e-07 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 54.17 E-value: 4.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 609 LVEIILHRSNLTSFWKETVGMPNLRRLDLSDSeNLEQLPD-LSMAVNLEELITQGCKrLKKIPESISYLTRLTTLDVSYC 687
Cdd:COG4886 161 LKSLDLSNNQLTDLPEELGNLTNLKELDLSNN-QITDLPEpLGNLTNLEELDLSGNQ-LTDLPEPLANLTNLETLDLSNN 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 688 E-----ELASYITIRELNRSGRQIA-------------LYFSGKEVETRSIANLSIGGNIHIQMFWLDGNVDHLSFTTEQ 749
Cdd:COG4886 239 QltdlpELGNLTNLEELDLSNNQLTdlpplanltnlktLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLL 318
|
....*...
gi 1063696589 750 QGPDKLTK 757
Cdd:COG4886 319 LLTTLLLL 326
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
613-706 |
2.03e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 45.31 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063696589 613 ILHRSNLTSFWKETVGMPNLRRLDLSDSENLEQLPdlsmavNLEELITQGCKrLKKIPESISYLTRLTTLDVSYC----- 687
Cdd:COG4886 79 LLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLT------NLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNqltdl 151
|
90 100
....*....|....*....|
gi 1063696589 688 -EELASYITIRELNRSGRQI 706
Cdd:COG4886 152 pEPLGNLTNLKSLDLSNNQL 171
|
|
| |
