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Conserved domains on  [gi|1063695566|ref|NP_001323263|]
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glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Arabidopsis thaliana]

Protein Classification

CBM_4_9 and Glyco_10 domain-containing protein( domain architecture ID 10488353)

CBM_4_9 and Glyco_10 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glyco_10 smart00633
Glycosyl hydrolase family 10;
635-881 1.60e-83

Glycosyl hydrolase family 10;


:

Pssm-ID: 214750  Cd Length: 263  Bit Score: 269.87  E-value: 1.60e-83
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  635 LKWYWTEPEQGKLNYQDADDMLNLCSSNNIETRGHCIFWEVQatVQQWIQNMNQT---DLNNAVQNRLTDLLNRYKGKFK 711
Cdd:smart00633   1 MKWDSTEPSRGQFNFSGADAIVNFAKENGIKVRGHTLVWHSQ--TPDWVFNLNISgkeTLLARLENHIKTVVGRYKGKIY 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  712 HYDVNNEMLHG--------SFYQDKLGKDIRVNMFKTAHQLDPSATLFVNDYHIEDGcDPKScpEKYTEQILDLQEKGAP 783
Cdd:smart00633  79 AWDVVNEAIHDngsglrrsSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEP-NAKR--QAIYELVKKLKAKGVP 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  784 VGGIGIQGHI--DSPVGPIVCSALDKLGILGLPIWFTELDVS-----SVNEHIRADDLEVMMWEAFGHPAVEGIMLWGFW 856
Cdd:smart00633 156 IDGIGLQSHLslGGPNIAEIRAALDRFASLGLEIWITELDISgppnpEENLQAQAADYEEVFKACLAHPAVTGVTVWGVT 235
                          250       260
                   ....*....|....*....|....*...
gi 1063695566  857 ELFMSRDNS---HLVNAEGDVNEAGKRF 881
Cdd:smart00633 236 DGYSWLDGFgapLLFDANYQPKPAYWAI 263
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
396-542 1.31e-22

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


:

Pssm-ID: 396553  Cd Length: 134  Bit Score: 94.44  E-value: 1.31e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 396 VNILTNSHLSDDTTNGWFSLGNCTLSVAEGSPrilppmardslgaHErlSGRYILVTNRTQTWMGPAQMITDKLKLFLTY 475
Cdd:pfam02018   1 GNLIKNGTFEDGGLDGWKARGGSGKATVDVTS-------------YN--GTYSLKVSGRTATWDGQIIDITIRLEKGTTY 65
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063695566 476 QISVWVKVGSGinSPQNVNVALGIDS-----QWVNGGQVEINDDrWHEIGGSFRIEKNPSKALVYVQGPSSG 542
Cdd:pfam02018  66 TVSFWVKASSG--PPQTVSVTLQITDasgnyDTVADEKVVLTGE-WTKLEGTFTIPKTASTVELYVELPDST 134
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
227-365 9.36e-18

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


:

Pssm-ID: 396553  Cd Length: 134  Bit Score: 80.57  E-value: 9.36e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 227 IVVNPNFED-GLNNWSGR--SCKIVLHDSMADGKIVpesgkvfASATERTQNWNGIQQEITGKVQRKRVYEATAVVriYG 303
Cdd:pfam02018   3 LIKNGTFEDgGLDGWKARggSGKATVDVTSYNGTYS-------LKVSGRTATWDGQIIDITIRLEKGTTYTVSFWV--KA 73
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063695566 304 NNVTTATVQATlwVQNPNQRDQYIGISTVQ-ATDKEWIHLKGKFLLNGSASRVVIYIEGPPPG 365
Cdd:pfam02018  74 SSGPPQTVSVT--LQITDASGNYDTVADEKvVLTGEWTKLEGTFTIPKTASTVELYVELPDST 134
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
57-199 1.53e-17

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


:

Pssm-ID: 396553  Cd Length: 134  Bit Score: 79.80  E-value: 1.53e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  57 NVIVNHDFSS-GMHSWHPNCCEAFVVTAESNVShgvldpskcGSYVV-VKNRKETWQGLEQDITNRVKPCSLYKVSATV- 133
Cdd:pfam02018   2 NLIKNGTFEDgGLDGWKARGGSGKATVDVTSYN---------GTYSLkVSGRTATWDGQIIDITIRLEKGTTYTVSFWVk 72
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063695566 134 AVSGPvhgLVEVMATLKLESqQSQTNYQFIAKTCVFKEKWVRLEGMFSLPSLPEKVVFYLEGPSPG 199
Cdd:pfam02018  73 ASSGP---PQTVSVTLQITD-ASGNYDTVADEKVVLTGEWTKLEGTFTIPKTASTVELYVELPDST 134
 
Name Accession Description Interval E-value
Glyco_10 smart00633
Glycosyl hydrolase family 10;
635-881 1.60e-83

Glycosyl hydrolase family 10;


Pssm-ID: 214750  Cd Length: 263  Bit Score: 269.87  E-value: 1.60e-83
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  635 LKWYWTEPEQGKLNYQDADDMLNLCSSNNIETRGHCIFWEVQatVQQWIQNMNQT---DLNNAVQNRLTDLLNRYKGKFK 711
Cdd:smart00633   1 MKWDSTEPSRGQFNFSGADAIVNFAKENGIKVRGHTLVWHSQ--TPDWVFNLNISgkeTLLARLENHIKTVVGRYKGKIY 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  712 HYDVNNEMLHG--------SFYQDKLGKDIRVNMFKTAHQLDPSATLFVNDYHIEDGcDPKScpEKYTEQILDLQEKGAP 783
Cdd:smart00633  79 AWDVVNEAIHDngsglrrsSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEP-NAKR--QAIYELVKKLKAKGVP 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  784 VGGIGIQGHI--DSPVGPIVCSALDKLGILGLPIWFTELDVS-----SVNEHIRADDLEVMMWEAFGHPAVEGIMLWGFW 856
Cdd:smart00633 156 IDGIGLQSHLslGGPNIAEIRAALDRFASLGLEIWITELDISgppnpEENLQAQAADYEEVFKACLAHPAVTGVTVWGVT 235
                          250       260
                   ....*....|....*....|....*...
gi 1063695566  857 ELFMSRDNS---HLVNAEGDVNEAGKRF 881
Cdd:smart00633 236 DGYSWLDGFgapLLFDANYQPKPAYWAI 263
XynA COG3693
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism];
589-857 4.07e-70

Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism];


Pssm-ID: 442908  Cd Length: 328  Bit Score: 235.95  E-value: 4.07e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 589 SGASVRVRQIRNSFPVGTCISRSNIDNEDFVDFFLKNFNWAVFANELKWYWTEPEQGKLNYQDADDMLNLCSSNNIETRG 668
Cdd:COG3693    14 GAASLKDLAADKGFLFGTAVNAGQLDDPAYRELLAREFNSVTPENEMKWGSIEPERGEFNFSAADAIVAFAKANGMKVRG 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 669 HCIFWEVQatVQQWI--QNMNQTDLNNAVQNRLTDLLNRYKGKFKHYDVNNEMLH------GSFYQDKLGKDIRVNMFKT 740
Cdd:COG3693    94 HTLVWHSQ--TPDWVfeDALSKEELRARLEEHITTVVGRYKGKIYAWDVVNEAIDddgslrNSPWYQALGPDYIADAFRW 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 741 AHQLDPSATLFVNDYHIEDGcDPKScpEKYTEQILDLQEKGAPVGGIGIQGHI--DSPVGPIVCSALDKLGILGLPIWFT 818
Cdd:COG3693   172 AREADPDAKLFYNDYNIEGG-PAKR--DAYLELVKDLKARGVPIDGVGLQGHLglDYPSPEEIEAALDRFAALGLPIHIT 248
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063695566 819 ELDVS--------SVNEHIRADDLEVMMWEAFGHPAVEGIMLWGFWE 857
Cdd:COG3693   249 ELDVRvlplpdltEEDDAAQADRYRDLFDAFLSHPAVTGVTFWGLTD 295
Glyco_hydro_10 pfam00331
Glycosyl hydrolase family 10;
603-855 7.01e-45

Glycosyl hydrolase family 10;


Pssm-ID: 425613  Cd Length: 310  Bit Score: 164.39  E-value: 7.01e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 603 PVGTCISRSNIDNED-FVDFFLKNFNWAVFANELKWYWTEPEQGKLNYQDADDMLNLCSSNNIETRGHCIFWEVQATvqQ 681
Cdd:pfam00331  11 YFGTAVSAGELLGNSqYTAILKAEFNQVTPENEMKWDALEPSRGNFTFANADRIVNFAKQNGMAVRGHTLVWHSQLP--D 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 682 WIQNMN--QTDLNNAVQNRLTDLLNRYKGKFKHYDVNNEMLH--------GSFYQDKLGKDIRVNMFKTAHQLDPSATLF 751
Cdd:pfam00331  89 WVFNINgsKADLLQVLENHITTVVGHYKGKIYAWDVVNEAFDddgsgglrSSVWYQVLGEDYIEIAFRAAREADPDAKLY 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 752 VNDYHIEDGcDPKScpEKYTEQILDLQEKGAPVGGIGIQGHIDSPVGPI--VCSALDKLGILGLPIWFTELDVSSVNEHI 829
Cdd:pfam00331 169 YNDYNIEED-GAKR--DAVYNLVKDLKAKGVPIDGIGFQSHLSAGGPSIsnIRAALQRFAALGLEVAITELDIRGPDPSD 245
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1063695566 830 RADD-------LEVMmwEAF-GHPAVEGIMLWGF 855
Cdd:pfam00331 246 EEALqaqaaryKEVF--KAClAVPNCTGITVWGV 277
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
396-542 1.31e-22

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


Pssm-ID: 396553  Cd Length: 134  Bit Score: 94.44  E-value: 1.31e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 396 VNILTNSHLSDDTTNGWFSLGNCTLSVAEGSPrilppmardslgaHErlSGRYILVTNRTQTWMGPAQMITDKLKLFLTY 475
Cdd:pfam02018   1 GNLIKNGTFEDGGLDGWKARGGSGKATVDVTS-------------YN--GTYSLKVSGRTATWDGQIIDITIRLEKGTTY 65
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063695566 476 QISVWVKVGSGinSPQNVNVALGIDS-----QWVNGGQVEINDDrWHEIGGSFRIEKNPSKALVYVQGPSSG 542
Cdd:pfam02018  66 TVSFWVKASSG--PPQTVSVTLQITDasgnyDTVADEKVVLTGE-WTKLEGTFTIPKTASTVELYVELPDST 134
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
227-365 9.36e-18

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


Pssm-ID: 396553  Cd Length: 134  Bit Score: 80.57  E-value: 9.36e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 227 IVVNPNFED-GLNNWSGR--SCKIVLHDSMADGKIVpesgkvfASATERTQNWNGIQQEITGKVQRKRVYEATAVVriYG 303
Cdd:pfam02018   3 LIKNGTFEDgGLDGWKARggSGKATVDVTSYNGTYS-------LKVSGRTATWDGQIIDITIRLEKGTTYTVSFWV--KA 73
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063695566 304 NNVTTATVQATlwVQNPNQRDQYIGISTVQ-ATDKEWIHLKGKFLLNGSASRVVIYIEGPPPG 365
Cdd:pfam02018  74 SSGPPQTVSVT--LQITDASGNYDTVADEKvVLTGEWTKLEGTFTIPKTASTVELYVELPDST 134
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
57-199 1.53e-17

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


Pssm-ID: 396553  Cd Length: 134  Bit Score: 79.80  E-value: 1.53e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  57 NVIVNHDFSS-GMHSWHPNCCEAFVVTAESNVShgvldpskcGSYVV-VKNRKETWQGLEQDITNRVKPCSLYKVSATV- 133
Cdd:pfam02018   2 NLIKNGTFEDgGLDGWKARGGSGKATVDVTSYN---------GTYSLkVSGRTATWDGQIIDITIRLEKGTTYTVSFWVk 72
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063695566 134 AVSGPvhgLVEVMATLKLESqQSQTNYQFIAKTCVFKEKWVRLEGMFSLPSLPEKVVFYLEGPSPG 199
Cdd:pfam02018  73 ASSGP---PQTVSVTLQITD-ASGNYDTVADEKVVLTGEWTKLEGTFTIPKTASTVELYVELPDST 134
 
Name Accession Description Interval E-value
Glyco_10 smart00633
Glycosyl hydrolase family 10;
635-881 1.60e-83

Glycosyl hydrolase family 10;


Pssm-ID: 214750  Cd Length: 263  Bit Score: 269.87  E-value: 1.60e-83
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  635 LKWYWTEPEQGKLNYQDADDMLNLCSSNNIETRGHCIFWEVQatVQQWIQNMNQT---DLNNAVQNRLTDLLNRYKGKFK 711
Cdd:smart00633   1 MKWDSTEPSRGQFNFSGADAIVNFAKENGIKVRGHTLVWHSQ--TPDWVFNLNISgkeTLLARLENHIKTVVGRYKGKIY 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  712 HYDVNNEMLHG--------SFYQDKLGKDIRVNMFKTAHQLDPSATLFVNDYHIEDGcDPKScpEKYTEQILDLQEKGAP 783
Cdd:smart00633  79 AWDVVNEAIHDngsglrrsSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEP-NAKR--QAIYELVKKLKAKGVP 155
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  784 VGGIGIQGHI--DSPVGPIVCSALDKLGILGLPIWFTELDVS-----SVNEHIRADDLEVMMWEAFGHPAVEGIMLWGFW 856
Cdd:smart00633 156 IDGIGLQSHLslGGPNIAEIRAALDRFASLGLEIWITELDISgppnpEENLQAQAADYEEVFKACLAHPAVTGVTVWGVT 235
                          250       260
                   ....*....|....*....|....*...
gi 1063695566  857 ELFMSRDNS---HLVNAEGDVNEAGKRF 881
Cdd:smart00633 236 DGYSWLDGFgapLLFDANYQPKPAYWAI 263
XynA COG3693
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism];
589-857 4.07e-70

Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism];


Pssm-ID: 442908  Cd Length: 328  Bit Score: 235.95  E-value: 4.07e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 589 SGASVRVRQIRNSFPVGTCISRSNIDNEDFVDFFLKNFNWAVFANELKWYWTEPEQGKLNYQDADDMLNLCSSNNIETRG 668
Cdd:COG3693    14 GAASLKDLAADKGFLFGTAVNAGQLDDPAYRELLAREFNSVTPENEMKWGSIEPERGEFNFSAADAIVAFAKANGMKVRG 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 669 HCIFWEVQatVQQWI--QNMNQTDLNNAVQNRLTDLLNRYKGKFKHYDVNNEMLH------GSFYQDKLGKDIRVNMFKT 740
Cdd:COG3693    94 HTLVWHSQ--TPDWVfeDALSKEELRARLEEHITTVVGRYKGKIYAWDVVNEAIDddgslrNSPWYQALGPDYIADAFRW 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 741 AHQLDPSATLFVNDYHIEDGcDPKScpEKYTEQILDLQEKGAPVGGIGIQGHI--DSPVGPIVCSALDKLGILGLPIWFT 818
Cdd:COG3693   172 AREADPDAKLFYNDYNIEGG-PAKR--DAYLELVKDLKARGVPIDGVGLQGHLglDYPSPEEIEAALDRFAALGLPIHIT 248
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1063695566 819 ELDVS--------SVNEHIRADDLEVMMWEAFGHPAVEGIMLWGFWE 857
Cdd:COG3693   249 ELDVRvlplpdltEEDDAAQADRYRDLFDAFLSHPAVTGVTFWGLTD 295
Glyco_hydro_10 pfam00331
Glycosyl hydrolase family 10;
603-855 7.01e-45

Glycosyl hydrolase family 10;


Pssm-ID: 425613  Cd Length: 310  Bit Score: 164.39  E-value: 7.01e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 603 PVGTCISRSNIDNED-FVDFFLKNFNWAVFANELKWYWTEPEQGKLNYQDADDMLNLCSSNNIETRGHCIFWEVQATvqQ 681
Cdd:pfam00331  11 YFGTAVSAGELLGNSqYTAILKAEFNQVTPENEMKWDALEPSRGNFTFANADRIVNFAKQNGMAVRGHTLVWHSQLP--D 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 682 WIQNMN--QTDLNNAVQNRLTDLLNRYKGKFKHYDVNNEMLH--------GSFYQDKLGKDIRVNMFKTAHQLDPSATLF 751
Cdd:pfam00331  89 WVFNINgsKADLLQVLENHITTVVGHYKGKIYAWDVVNEAFDddgsgglrSSVWYQVLGEDYIEIAFRAAREADPDAKLY 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 752 VNDYHIEDGcDPKScpEKYTEQILDLQEKGAPVGGIGIQGHIDSPVGPI--VCSALDKLGILGLPIWFTELDVSSVNEHI 829
Cdd:pfam00331 169 YNDYNIEED-GAKR--DAVYNLVKDLKAKGVPIDGIGFQSHLSAGGPSIsnIRAALQRFAALGLEVAITELDIRGPDPSD 245
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1063695566 830 RADD-------LEVMmwEAF-GHPAVEGIMLWGF 855
Cdd:pfam00331 246 EEALqaqaaryKEVF--KAClAVPNCTGITVWGV 277
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
396-542 1.31e-22

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


Pssm-ID: 396553  Cd Length: 134  Bit Score: 94.44  E-value: 1.31e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 396 VNILTNSHLSDDTTNGWFSLGNCTLSVAEGSPrilppmardslgaHErlSGRYILVTNRTQTWMGPAQMITDKLKLFLTY 475
Cdd:pfam02018   1 GNLIKNGTFEDGGLDGWKARGGSGKATVDVTS-------------YN--GTYSLKVSGRTATWDGQIIDITIRLEKGTTY 65
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1063695566 476 QISVWVKVGSGinSPQNVNVALGIDS-----QWVNGGQVEINDDrWHEIGGSFRIEKNPSKALVYVQGPSSG 542
Cdd:pfam02018  66 TVSFWVKASSG--PPQTVSVTLQITDasgnyDTVADEKVVLTGE-WTKLEGTFTIPKTASTVELYVELPDST 134
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
227-365 9.36e-18

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


Pssm-ID: 396553  Cd Length: 134  Bit Score: 80.57  E-value: 9.36e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566 227 IVVNPNFED-GLNNWSGR--SCKIVLHDSMADGKIVpesgkvfASATERTQNWNGIQQEITGKVQRKRVYEATAVVriYG 303
Cdd:pfam02018   3 LIKNGTFEDgGLDGWKARggSGKATVDVTSYNGTYS-------LKVSGRTATWDGQIIDITIRLEKGTTYTVSFWV--KA 73
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063695566 304 NNVTTATVQATlwVQNPNQRDQYIGISTVQ-ATDKEWIHLKGKFLLNGSASRVVIYIEGPPPG 365
Cdd:pfam02018  74 SSGPPQTVSVT--LQITDASGNYDTVADEKvVLTGEWTKLEGTFTIPKTASTVELYVELPDST 134
CBM_4_9 pfam02018
Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.
57-199 1.53e-17

Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.


Pssm-ID: 396553  Cd Length: 134  Bit Score: 79.80  E-value: 1.53e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063695566  57 NVIVNHDFSS-GMHSWHPNCCEAFVVTAESNVShgvldpskcGSYVV-VKNRKETWQGLEQDITNRVKPCSLYKVSATV- 133
Cdd:pfam02018   2 NLIKNGTFEDgGLDGWKARGGSGKATVDVTSYN---------GTYSLkVSGRTATWDGQIIDITIRLEKGTTYTVSFWVk 72
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063695566 134 AVSGPvhgLVEVMATLKLESqQSQTNYQFIAKTCVFKEKWVRLEGMFSLPSLPEKVVFYLEGPSPG 199
Cdd:pfam02018  73 ASSGP---PQTVSVTLQITD-ASGNYDTVADEKVVLTGEWTKLEGTFTIPKTASTVELYVELPDST 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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