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Conserved domains on  [gi|1063721519|ref|NP_001328045|]
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DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]

Protein Classification

DnaJ and zf-CSL domain-containing protein( domain architecture ID 10446348)

DnaJ and zf-CSL domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 11-76 1.17e-20

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


:

Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 80.21  E-value: 1.17e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDK---NPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
zf-CSL super family cl21704
CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which ...
 90-164 3.57e-06

CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which chelate zinc. This domain is often found associated with a pfam00226 domain. This domain is named after the conserved motif of the final cysteine.


The actual alignment was detected with superfamily member pfam05207:

Pssm-ID: 419794  Cd Length: 55  Bit Score: 42.23  E-value: 3.57e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  90 DEISIEDMSVEITGDVidLFYQCRCGDYFCVDSSElgtmgfalLRDGDfvyvkrlgafvasVVLPCGSCSLKTRV 164
Cdd:pfam05207   1 DEVELEDFEFDEEEES--YYYPCRCGDEFEITEED--------LEEGE-------------VVVQCPSCSLWIKV 52
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 11-76 1.17e-20

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 80.21  E-value: 1.17e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDK---NPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ smart00271
DnaJ molecular chaperone homology domain;
10-70 6.37e-19

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 75.73  E-value: 6.37e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063721519   10 ETYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnNTSRSSSDDEKFLKIQKAWEVLSDAE 70
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDK--NPGDKEEAEEKFKEINEAYEVLSDPE 59
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
10-90 8.41e-17

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 71.29  E-value: 8.41e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721519  10 ETYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnNTSRSSSDDEKFLKIQKAWEVLSDAELRVVYDNDLRSSRHDGITA 89
Cdd:COG2214     5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDR--GGELKALAEELFQRLNEAYEVLSDPERRAEYDRELGQSGKGSASQ 82


                  .
gi 1063721519  90 D 90
Cdd:COG2214    83 P 83
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 11-68 4.29e-16

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 68.34  E-value: 4.29e-16
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSssdDEKFLKIQKAWEVLSD 68
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEA---EEKFKEINEAYEVLSD 55
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 12-76 1.02e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 70.59  E-value: 1.02e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnNTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14282    6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDR--HPENRKEAEQKFKEIQEAYEVLSDPQKRAMYD 68
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 12-76 2.40e-13

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 66.47  E-value: 2.40e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnntSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDR----NKDKEAEEKFKEINEAYEVLSDPEKRAQYD 62
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
12-87 8.63e-09

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 53.67  E-value: 8.63e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnntsRSSSDD--EKFLKIQKAWEVLSDAELRVVYDNdlrsSRHDGI 87
Cdd:NF037946    7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPD------RNKAPDaaEIFAEINEAYEVLSNPEKRANYDK----YGHDGV 74
zf-CSL pfam05207
CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which ...
 90-164 3.57e-06

CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which chelate zinc. This domain is often found associated with a pfam00226 domain. This domain is named after the conserved motif of the final cysteine.


Pssm-ID: 398744  Cd Length: 55  Bit Score: 42.23  E-value: 3.57e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  90 DEISIEDMSVEITGDVidLFYQCRCGDYFCVDSSElgtmgfalLRDGDfvyvkrlgafvasVVLPCGSCSLKTRV 164
Cdd:pfam05207   1 DEVELEDFEFDEEEES--YYYPCRCGDEFEITEED--------LEEGE-------------VVVQCPSCSLWIKV 52
 
Name Accession Description Interval E-value
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 11-76 1.17e-20

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 80.21  E-value: 1.17e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDK---NPGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ smart00271
DnaJ molecular chaperone homology domain;
10-70 6.37e-19

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 75.73  E-value: 6.37e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063721519   10 ETYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnNTSRSSSDDEKFLKIQKAWEVLSDAE 70
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDK--NPGDKEEAEEKFKEINEAYEVLSDPE 59
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
10-90 8.41e-17

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 71.29  E-value: 8.41e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721519  10 ETYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnNTSRSSSDDEKFLKIQKAWEVLSDAELRVVYDNDLRSSRHDGITA 89
Cdd:COG2214     5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDR--GGELKALAEELFQRLNEAYEVLSDPERRAEYDRELGQSGKGSASQ 82


                  .
gi 1063721519  90 D 90
Cdd:COG2214    83 P 83
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 11-76 3.18e-16

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 71.27  E-value: 3.18e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSssdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPEA---EEKFKEINEAYEVLSDPEKRAAYD 63
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 11-68 4.29e-16

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 68.34  E-value: 4.29e-16
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSssdDEKFLKIQKAWEVLSD 68
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEA---EEKFKEINEAYEVLSD 55
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 12-76 1.02e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 70.59  E-value: 1.02e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnNTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14282    6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDR--HPENRKEAEQKFKEIQEAYEVLSDPQKRAMYD 68
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 12-110 2.07e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 69.49  E-value: 2.07e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnntSRSSSDDEKFLKIQKAWEVLSDAELRVVYDNdlrsSRHDGITaDE 91
Cdd:PRK14298    7 YYEILGLSKDASVEDIKKAYRKLAMKYHPDK----NKEPDAEEKFKEISEAYAVLSDAEKRAQYDR----FGHAGID-NQ 77

                          90       100
                  ....*....|....*....|...
gi 1063721519  92 ISIEDM--SVEIT--GDVIDLFY 110
Cdd:PRK14298   78 YSAEDIfrGADFGgfGDIFEMFF 100
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 10-76 1.22e-13

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 67.54  E-value: 1.22e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063721519  10 ETYYEILSVKEDASYEEIRNSYRS-AILHsHPDKlnntsrsSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PTZ00037   28 EKLYEVLNLSKDCTTSEIKKAYRKlAIKH-HPDK-------GGDPEKFKEISRAYEVLSDPEKRKIYD 87
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 12-76 2.40e-13

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 66.47  E-value: 2.40e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnntSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDR----NKDKEAEEKFKEINEAYEVLSDPEKRAQYD 62
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 12-76 2.01e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 64.02  E-value: 2.01e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlNNTSRSSsdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDR-NPGDKEA--EELFKEAAEAYEVLSDPKKRGIYD 67
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 12-108 2.79e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 63.64  E-value: 2.79e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDkLNntsRSSSDDEKFLKIQKAWEVLSDAELRVVYDNdlrsSRHDGITADE 91
Cdd:PRK14291    5 YYEILGVSRNATQEEIKKAYRRLARKYHPD-FN---KNPEAEEKFKEINEAYQVLSDPEKRKLYDQ----FGHAAFSGSG 76

                          90
                  ....*....|....*..
gi 1063721519  92 ISIEDMSVEITGDVIDL 108
Cdd:PRK14291   77 QQQQGQEGFSDFGGGNI 93
PRK14280 PRK14280
molecular chaperone DnaJ;
12-76 2.99e-12

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 63.59  E-value: 2.99e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14280    6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPD----INKEEGADEKFKEISEAYEVLSDDQKRAQYD 66
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 12-76 1.05e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 61.70  E-value: 1.05e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlNNTSRSSsdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDR-NPGDKEA--EEKFKEIKEAYEVLSDPQKRAAYD 67
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 12-76 2.98e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 60.63  E-value: 2.98e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14284    3 YYTILGVSKTASPEEIKKAYRKLAVKYHPDK---NPGDAEAEKRFKEVSEAYEVLSDAQKRESYD 64
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 10-76 3.08e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 60.49  E-value: 3.08e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063721519  10 ETYYEILSVKEDASYEEIRNSYRSAILHSHPDkLNntsRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14276    4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPD-IN---KEPGAEEKYKEVQEAYETLSDPQKRAAYD 66
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 12-76 3.20e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 60.67  E-value: 3.20e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnntSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14292    4 YYELLGVSRTASADEIKSAYRKLALKYHPDR----NKEKGAAEKFAQINEAYAVLSDAEKRAHYD 64
PRK14293 PRK14293
molecular chaperone DnaJ;
12-76 3.53e-11

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 60.39  E-value: 3.53e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14293    5 YYEILGVSRDADKDELKRAYRRLARKYHPD----VNKEPGAEDRFKEINRAYEVLSDPETRARYD 65
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 12-76 5.07e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 59.81  E-value: 5.07e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDkLNNTSRSSsdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14277    7 YYEILGVDRNATEEEIKKAYRRLAKKYHPD-LNPGDKEA--EQKFKEINEAYEILSDPQKRAQYD 68
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 11-118 6.77e-11

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 59.62  E-value: 6.77e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKlNNTSRSSsdDEKFLKIQKAWEVLSDAELRVVYDNDLRSSRHDGITA- 89
Cdd:PRK14286    5 SYYDILGVSKSANDEEIKSAYRKLAIKYHPDK-NKGNKES--EEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGf 81

                          90       100
                  ....*....|....*....|....*....
gi 1063721519  90 DEISIEDMSvEITGDVIDLFyqcrcGDYF 118
Cdd:PRK14286   82 GQGAYTDFS-DIFGDFGDIF-----GDFF 104
PRK10266 PRK10266
curved DNA-binding protein;
12-85 6.80e-11

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 59.45  E-value: 6.80e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYDNdLRSSRHD 85
Cdd:PRK10266    6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPD----VSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQ-LWQHRND 74
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 8-76 1.23e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 58.99  E-value: 1.23e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063721519   8 VHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSssdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14301    2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEA---EQKFKEAAEAYEVLRDAEKRARYD 67
PRK14289 PRK14289
molecular chaperone DnaJ;
12-76 1.49e-10

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 58.69  E-value: 1.49e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlNNTSRSSsdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14289    7 YYEVLGVSKTATVDEIKKAYRKKAIQYHPDK-NPGDKEA--EEKFKEAAEAYDVLSDPDKRSRYD 68
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 12-109 5.11e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 57.14  E-value: 5.11e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYDNdLRSSRHDGITADE 91
Cdd:PRK14283    7 YYEVLGVDRNADKKEIKKAYRKLARKYHPD----VSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQ-FGHAGMDGFSQED 81

                          90       100
                  ....*....|....*....|..
gi 1063721519  92 I----SIEDMSVEITGDVIDLF 109
Cdd:PRK14283   82 IfnniNFEDIFQGFGFGIGNIF 103
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 12-76 6.16e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 56.74  E-value: 6.16e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSssdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14281    5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEA---EEHFKEVNEAYEVLSNDDKRRRYD 66
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 12-76 7.25e-10

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 56.49  E-value: 7.25e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14299    6 YYAILGVPKNASQDEIKKAFKKLARKYHPD----VNKSPGAEEKFKEINEAYTVLSDPEKRRIYD 66
PRK14297 PRK14297
molecular chaperone DnaJ;
12-76 1.19e-09

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 55.94  E-value: 1.19e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSssdDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14297    6 YYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEA---EEKFKEINEAYQVLSDPQKKAQYD 67
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 12-76 1.19e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 56.09  E-value: 1.19e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlnNTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14290    5 YYKILGVDRNASQEDIKKAFRELAKKWHPDL--HPGNKAEAEEKFKEISEAYEVLSDPQKRRQYD 67
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 12-76 2.07e-09

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 55.44  E-value: 2.07e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDkLNNTSRSSsddEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14278    5 YYGLLGVSRNASDAEIKRAYRKLARELHPD-VNPDEEAQ---EKFKEISVAYEVLSDPEKRRIVD 65
PRK14295 PRK14295
molecular chaperone DnaJ;
8-77 2.73e-09

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 54.85  E-value: 2.73e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063721519   8 VHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSssdDEKFLKIQKAWEVLSDAELRVVYDN 77
Cdd:PRK14295    7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKA---EERFKEISEAYDVLSDEKKRKEYDE 73
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
12-87 8.63e-09

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 53.67  E-value: 8.63e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnntsRSSSDD--EKFLKIQKAWEVLSDAELRVVYDNdlrsSRHDGI 87
Cdd:NF037946    7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPD------RNKAPDaaEIFAEINEAYEVLSNPEKRANYDK----YGHDGV 74
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 12-76 2.18e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 52.26  E-value: 2.18e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDkLNntsRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14296    6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPD-LN---KSPDAHDKMVEINEAADVLLDKDKRKQYD 66
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 12-76 5.48e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 51.15  E-value: 5.48e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSddeKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14285    5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAES---IFKEATEAYEVLIDDNKRAQYD 66
PRK14288 PRK14288
molecular chaperone DnaJ;
11-76 7.53e-08

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 50.84  E-value: 7.53e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721519  11 TYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14288    4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDR---NAGDKEAEEKFKLINEAYGVLSDEKKRALYD 66
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 12-76 9.37e-08

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 50.39  E-value: 9.37e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDklnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14287    6 YYEVLGVDRNASVDEVKKAYRKLARKYHPD----VNKAPDAEDKFKEVKEAYDTLSDPQKKAHYD 66
PRK14279 PRK14279
molecular chaperone DnaJ;
8-76 2.65e-07

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 49.35  E-value: 2.65e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1063721519   8 VHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKlnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14279    7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDA---NPGDPAAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 10-76 5.21e-07

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 48.47  E-value: 5.21e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1063721519  10 ETYYEILSVKEDASYEEIRNSYRSAILHSHPDklnnTSRSSSDDEKFLKIQKAWEVLSDAELRVVYD 76
Cdd:PRK14300    3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPD----TTDAKDAEKKFKEINAAYDVLKDEQKRAAYD 65
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 12-87 5.93e-07

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 48.27  E-value: 5.93e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKlNNTSRSSSddeKFLKIQKAWEVLSDAELRVVYDNdlrsSRHDGI 87
Cdd:TIGR03835   4 YYEVLGIDRDADEQEIKKAFRKLAKKYHPDR-NKAPDAAS---IFAEINEANDVLSNPKKRANYDK----YGHDGV 71
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
12-69 8.36e-07

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 44.40  E-value: 8.36e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063721519  12 YYEILSVKEDASYEEIRNSYRSAILHSHPDKLnnTSRSSSDD-----EKFLKIQKAWEVLSDA 69
Cdd:COG1076     6 AFELLGLPPDADDAELKRAYRKLQREHHPDRL--AAGLPEEEqrlalQKAAAINEAYETLKDP 66
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 22-77 3.37e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 45.79  E-value: 3.37e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1063721519  22 ASYEEIRNSYRSAILHSHPDKlNNTSRSSSDDEKFLKIQKAWEVLSDAELRVVYDN 77
Cdd:COG5269    58 AIPPQILKAHKKKVYKYHPDK-TAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDS 112
zf-CSL pfam05207
CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which ...
 90-164 3.57e-06

CSL zinc finger; This is a zinc binding motif which contains four cysteine residues which chelate zinc. This domain is often found associated with a pfam00226 domain. This domain is named after the conserved motif of the final cysteine.


Pssm-ID: 398744  Cd Length: 55  Bit Score: 42.23  E-value: 3.57e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1063721519  90 DEISIEDMSVEITGDVidLFYQCRCGDYFCVDSSElgtmgfalLRDGDfvyvkrlgafvasVVLPCGSCSLKTRV 164
Cdd:pfam05207   1 DEVELEDFEFDEEEES--YYYPCRCGDEFEITEED--------LEEGE-------------VVVQCPSCSLWIKV 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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