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Conserved domains on  [gi|1063736194|ref|NP_001330960|]
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Disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

disease resistance family protein( domain architecture ID 1000118)

disease resistance family protein similar to Nicotiana glutinosa TMV resistance protein N; resistance proteins guard the plant against pathogens that contain an appropriate avirulence protein via a direct or indirect interaction with this avirulence protein

Gene Ontology:  GO:0006952

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 2-1082 1.05e-111

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 376.14  E-value: 1.05e-111
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    2 AASSSSTGLPPQHQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADKGEPLETLLTK-IHDSKIALAIFSGKYTES 80
Cdd:PLN03210     1 MASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQaIRDSRIAVVVFSKNYASS 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194   81 TWCLRELAMIKDCVEK-GKLVaIPIFYKVDPSTVRGVRGQFGDAF-RDLEERDVIKKKEWKQALKWIPGLIGITVHDKSP 158
Cdd:PLN03210    81 SWCLNELLEIVRCKEElGQLV-IPVFYGLDPSHVRKQTGDFGEAFeKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPN 159

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  159 ESEILNEIVKEVKKVlkkvslegsqkvVSVDPSQSIDTLssvggekdktFGIKQRLKELEEKLDLvKYKGTRVIGVVGMP 238
Cdd:PLN03210   160 EAKMIEEIANDVLGK------------LNLTPSNDFEDF----------VGIEDHIAKMSSLLHL-ESEEVRMVGIWGSS 216

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  239 GIGKTTLVKELYKTWQGKFSRYALIDQI----------RGKSNNFRLECLPTLLLEKLLPELNNPQLDSIEEPYKThkgl 308
Cdd:PLN03210   217 GIGKTTIARALFSRLSRQFQSSVFIDRAfisksmeiysSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEER---- 292

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  309 LRERKVLVVLDDVSRREQIYALLGKYdlhskhEWIKDGSRIIIATNDISSLK--GLVHdTYVVRQLNHRDGLQLFRYHAF 386
Cdd:PLN03210   293 LKHRKVLIFIDDLDDQDVLDALAGQT------QWFGSGSRIIVITKDKHFLRahGIDH-IYEVCLPSNELALEMFCRSAF 365

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  387 HydQATPPKvDFMKLSDEFVHYARGHPLALKILGRELYEKNMKHWETKLIILAQSPTTYIGEVVQVSYDELSLAQKDA-F 465
Cdd:PLN03210   366 K--KNSPPD-GFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNNKKDKAiF 442

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  466 LDIAC-FRSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYRFSRELDLKASTQGGSKQRrLWVRQDI 544
Cdd:PLN03210   443 RHIAClFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKEIVRAQSNEPGEREF-LVDAKDI 521

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  545 INVQQKTMGAANVRGIFLDLSEVKvETSLDREHFKNMRNLRYLKLYNSHCPHEclTNNKINMPDGLE-LPLKeVRCLHWL 623
Cdd:PLN03210   522 CDVLEDNTGTKKVLGITLDIDEID-ELHIHENAFKGMRNLLFLKFYTKKWDQK--KEVRWHLPEGFDyLPPK-LRLLRWD 597

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  624 KFPLEELPNDFDPINLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLESLRD-- 701
Cdd:PLN03210   598 KYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSsi 677

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  702 -----------------------VNLTSLKTLTLSNCSNFKEFPLIPENLKALYLDGTSISQLPDN-------------- 744
Cdd:PLN03210   678 qylnkledldmsrcenleilptgINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNlrlenldelilcem 757

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  745 ----------------------------------------VGNLKRLVLLNMKDCKVLETIPTCVSeLKTLQKLVLSGCS 784
Cdd:PLN03210   758 kseklwervqpltplmtmlspsltrlflsdipslvelpssIQNLHKLEHLEIENCINLETLPTGIN-LESLESLDLSGCS 836

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  785 KLKEFPEINkSSLKILLLDGTSIKTMP----QLPSVQYLCLSRNDHLIYLPAGINQVSQLTRLDLKYCTKLTyvpelppt 860
Cdd:PLN03210   837 RLRTFPDIS-TNISDLNLSRTGIEEVPwwieKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGALT-------- 907

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  861 lqylDAHGCSSLKNVAKPLARIMSTVQNHYTFNFTNCGNLEQAAkeeitsyaqrkcqlLSDARKHYNegsealfSTCFPG 940
Cdd:PLN03210   908 ----EASWNGSPSEVAMATDNIHSKLPSTVCINFINCFNLDQEA--------------LLQQQSIFK-------QLILSG 962

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  941 CEVPSWFGHEAVGSLLQRKLLPHWH-DKRLSGIALCAVVSFpDSQDQLSCFS---VTCTFKikaedkswvpftcpvgiwT 1016
Cdd:PLN03210   963 EEVPSYFTHRTTGASLTNIPLLHISpCQPFFRFRACAVVDS-ESFFIISVSFdiqVCCRFI------------------D 1023

                         1130      1140      1150      1160      1170      1180      1190
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063736194 1017 REGNKKDRIESDHVFIAYISSPHSI--RC---LEEKNSD--KCNFSEASLEFTVTSDTSGigvFKVLKCGLSL 1082
Cdd:PLN03210  1024 RLGNHFDSPYQPHVFSVTKKGSHLVifDCcfpLNEDNAPlaELNYDHVDIQFRLTNKNSQ---LKLKGCGIRL 1093
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 2-1082 1.05e-111

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 376.14  E-value: 1.05e-111
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    2 AASSSSTGLPPQHQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADKGEPLETLLTK-IHDSKIALAIFSGKYTES 80
Cdd:PLN03210     1 MASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQaIRDSRIAVVVFSKNYASS 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194   81 TWCLRELAMIKDCVEK-GKLVaIPIFYKVDPSTVRGVRGQFGDAF-RDLEERDVIKKKEWKQALKWIPGLIGITVHDKSP 158
Cdd:PLN03210    81 SWCLNELLEIVRCKEElGQLV-IPVFYGLDPSHVRKQTGDFGEAFeKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPN 159

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  159 ESEILNEIVKEVKKVlkkvslegsqkvVSVDPSQSIDTLssvggekdktFGIKQRLKELEEKLDLvKYKGTRVIGVVGMP 238
Cdd:PLN03210   160 EAKMIEEIANDVLGK------------LNLTPSNDFEDF----------VGIEDHIAKMSSLLHL-ESEEVRMVGIWGSS 216

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  239 GIGKTTLVKELYKTWQGKFSRYALIDQI----------RGKSNNFRLECLPTLLLEKLLPELNNPQLDSIEEPYKThkgl 308
Cdd:PLN03210   217 GIGKTTIARALFSRLSRQFQSSVFIDRAfisksmeiysSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEER---- 292

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  309 LRERKVLVVLDDVSRREQIYALLGKYdlhskhEWIKDGSRIIIATNDISSLK--GLVHdTYVVRQLNHRDGLQLFRYHAF 386
Cdd:PLN03210   293 LKHRKVLIFIDDLDDQDVLDALAGQT------QWFGSGSRIIVITKDKHFLRahGIDH-IYEVCLPSNELALEMFCRSAF 365

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  387 HydQATPPKvDFMKLSDEFVHYARGHPLALKILGRELYEKNMKHWETKLIILAQSPTTYIGEVVQVSYDELSLAQKDA-F 465
Cdd:PLN03210   366 K--KNSPPD-GFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNNKKDKAiF 442

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  466 LDIAC-FRSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYRFSRELDLKASTQGGSKQRrLWVRQDI 544
Cdd:PLN03210   443 RHIAClFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKEIVRAQSNEPGEREF-LVDAKDI 521

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  545 INVQQKTMGAANVRGIFLDLSEVKvETSLDREHFKNMRNLRYLKLYNSHCPHEclTNNKINMPDGLE-LPLKeVRCLHWL 623
Cdd:PLN03210   522 CDVLEDNTGTKKVLGITLDIDEID-ELHIHENAFKGMRNLLFLKFYTKKWDQK--KEVRWHLPEGFDyLPPK-LRLLRWD 597

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  624 KFPLEELPNDFDPINLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLESLRD-- 701
Cdd:PLN03210   598 KYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSsi 677

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  702 -----------------------VNLTSLKTLTLSNCSNFKEFPLIPENLKALYLDGTSISQLPDN-------------- 744
Cdd:PLN03210   678 qylnkledldmsrcenleilptgINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNlrlenldelilcem 757

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  745 ----------------------------------------VGNLKRLVLLNMKDCKVLETIPTCVSeLKTLQKLVLSGCS 784
Cdd:PLN03210   758 kseklwervqpltplmtmlspsltrlflsdipslvelpssIQNLHKLEHLEIENCINLETLPTGIN-LESLESLDLSGCS 836

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  785 KLKEFPEINkSSLKILLLDGTSIKTMP----QLPSVQYLCLSRNDHLIYLPAGINQVSQLTRLDLKYCTKLTyvpelppt 860
Cdd:PLN03210   837 RLRTFPDIS-TNISDLNLSRTGIEEVPwwieKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGALT-------- 907

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  861 lqylDAHGCSSLKNVAKPLARIMSTVQNHYTFNFTNCGNLEQAAkeeitsyaqrkcqlLSDARKHYNegsealfSTCFPG 940
Cdd:PLN03210   908 ----EASWNGSPSEVAMATDNIHSKLPSTVCINFINCFNLDQEA--------------LLQQQSIFK-------QLILSG 962

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  941 CEVPSWFGHEAVGSLLQRKLLPHWH-DKRLSGIALCAVVSFpDSQDQLSCFS---VTCTFKikaedkswvpftcpvgiwT 1016
Cdd:PLN03210   963 EEVPSYFTHRTTGASLTNIPLLHISpCQPFFRFRACAVVDS-ESFFIISVSFdiqVCCRFI------------------D 1023

                         1130      1140      1150      1160      1170      1180      1190
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063736194 1017 REGNKKDRIESDHVFIAYISSPHSI--RC---LEEKNSD--KCNFSEASLEFTVTSDTSGigvFKVLKCGLSL 1082
Cdd:PLN03210  1024 RLGNHFDSPYQPHVFSVTKKGSHLVifDCcfpLNEDNAPlaELNYDHVDIQFRLTNKNSQ---LKLKGCGIRL 1093
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 14-166 5.40e-36

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 134.03  E-value: 5.40e-36
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194   14 HQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNY-ADKGEPLETLLTK-IHDSKIALAIFSGKYTESTWCLRELAMIK 91
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdLEPGEAIAPELLSaIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063736194   92 DCVEKGKLVAIPIFYKVDPSTVRGVRGQFGDAFRDLEER-DVIKKKEWKQALKWIPGLIGItvHDKSPESEILNEI 166
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVlTEEKVLKWRGALNEVANIWHS--KSVSDESKFWKKI 154
TIR smart00255
Toll - interleukin 1 - resistance;
13-148 1.59e-29

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 114.73  E-value: 1.59e-29
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    13 QHQVFINFRG-EDLRLGFVSHLVEALENDNIKVFIDNYADKGEPLETLLTKIHDSKIALAIFSGKYTESTWCLRELAMIK 91
Cdd:smart00255    1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    92 DCVEK-GKLVAIPIFYKVDPSTVRGVRGQFGDAFRD--LEERDVIKKKEWKQALKWIPGL 148
Cdd:smart00255   81 ENALEeGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKnyLKWPEDEKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
637-868 5.70e-22

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 100.01  E-value: 5.70e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  637 INLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLEslrdvNLTSLKTLTLSNCs 716
Cdd:COG4886     50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELS-----NLTNLESLDLSGN- 123

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  717 NFKEFPLI---PENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKvLETIPTCVSELKTLQKLVLSGCsKLKEFP-EI 792
Cdd:COG4886    124 QLTDLPEElanLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKELDLSNN-QITDLPePL 201

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  793 NK-SSLKILLLDGTSIKTMP----QLPSVQYLCLSRNdHLIYLPAgINQVSQLTRLDLKYcTKLTYVPELP--PTLQYLD 865
Cdd:COG4886    202 GNlTNLEELDLSGNQLTDLPeplaNLTNLETLDLSNN-QLTDLPE-LGNLTNLEELDLSN-NQLTDLPPLAnlTNLKTLD 278


                   ...
gi 1063736194  866 AHG 868
Cdd:COG4886    279 LSN 281
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 2-1082 1.05e-111

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 376.14  E-value: 1.05e-111
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    2 AASSSSTGLPPQHQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADKGEPLETLLTK-IHDSKIALAIFSGKYTES 80
Cdd:PLN03210     1 MASSSSSSRNWVYDVFPSFSGEDVRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQaIRDSRIAVVVFSKNYASS 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194   81 TWCLRELAMIKDCVEK-GKLVaIPIFYKVDPSTVRGVRGQFGDAF-RDLEERDVIKKKEWKQALKWIPGLIGITVHDKSP 158
Cdd:PLN03210    81 SWCLNELLEIVRCKEElGQLV-IPVFYGLDPSHVRKQTGDFGEAFeKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPN 159

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  159 ESEILNEIVKEVKKVlkkvslegsqkvVSVDPSQSIDTLssvggekdktFGIKQRLKELEEKLDLvKYKGTRVIGVVGMP 238
Cdd:PLN03210   160 EAKMIEEIANDVLGK------------LNLTPSNDFEDF----------VGIEDHIAKMSSLLHL-ESEEVRMVGIWGSS 216

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  239 GIGKTTLVKELYKTWQGKFSRYALIDQI----------RGKSNNFRLECLPTLLLEKLLPELNNPQLDSIEEPYKThkgl 308
Cdd:PLN03210   217 GIGKTTIARALFSRLSRQFQSSVFIDRAfisksmeiysSANPDDYNMKLHLQRAFLSEILDKKDIKIYHLGAMEER---- 292

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  309 LRERKVLVVLDDVSRREQIYALLGKYdlhskhEWIKDGSRIIIATNDISSLK--GLVHdTYVVRQLNHRDGLQLFRYHAF 386
Cdd:PLN03210   293 LKHRKVLIFIDDLDDQDVLDALAGQT------QWFGSGSRIIVITKDKHFLRahGIDH-IYEVCLPSNELALEMFCRSAF 365

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  387 HydQATPPKvDFMKLSDEFVHYARGHPLALKILGRELYEKNMKHWETKLIILAQSPTTYIGEVVQVSYDELSLAQKDA-F 465
Cdd:PLN03210   366 K--KNSPPD-GFMELASEVALRAGNLPLGLNVLGSYLRGRDKEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNNKKDKAiF 442

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  466 LDIAC-FRSQDVDYVESLLVSSDPGSAEAIKALKNKFLIDTCDGRVEMHDLLYRFSRELDLKASTQGGSKQRrLWVRQDI 544
Cdd:PLN03210   443 RHIAClFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVREDIVEMHSLLQEMGKEIVRAQSNEPGEREF-LVDAKDI 521

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  545 INVQQKTMGAANVRGIFLDLSEVKvETSLDREHFKNMRNLRYLKLYNSHCPHEclTNNKINMPDGLE-LPLKeVRCLHWL 623
Cdd:PLN03210   522 CDVLEDNTGTKKVLGITLDIDEID-ELHIHENAFKGMRNLLFLKFYTKKWDQK--KEVRWHLPEGFDyLPPK-LRLLRWD 597

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  624 KFPLEELPNDFDPINLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLESLRD-- 701
Cdd:PLN03210   598 KYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSsi 677

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  702 -----------------------VNLTSLKTLTLSNCSNFKEFPLIPENLKALYLDGTSISQLPDN-------------- 744
Cdd:PLN03210   678 qylnkledldmsrcenleilptgINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIEEFPSNlrlenldelilcem 757

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  745 ----------------------------------------VGNLKRLVLLNMKDCKVLETIPTCVSeLKTLQKLVLSGCS 784
Cdd:PLN03210   758 kseklwervqpltplmtmlspsltrlflsdipslvelpssIQNLHKLEHLEIENCINLETLPTGIN-LESLESLDLSGCS 836

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  785 KLKEFPEINkSSLKILLLDGTSIKTMP----QLPSVQYLCLSRNDHLIYLPAGINQVSQLTRLDLKYCTKLTyvpelppt 860
Cdd:PLN03210   837 RLRTFPDIS-TNISDLNLSRTGIEEVPwwieKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGALT-------- 907

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  861 lqylDAHGCSSLKNVAKPLARIMSTVQNHYTFNFTNCGNLEQAAkeeitsyaqrkcqlLSDARKHYNegsealfSTCFPG 940
Cdd:PLN03210   908 ----EASWNGSPSEVAMATDNIHSKLPSTVCINFINCFNLDQEA--------------LLQQQSIFK-------QLILSG 962

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  941 CEVPSWFGHEAVGSLLQRKLLPHWH-DKRLSGIALCAVVSFpDSQDQLSCFS---VTCTFKikaedkswvpftcpvgiwT 1016
Cdd:PLN03210   963 EEVPSYFTHRTTGASLTNIPLLHISpCQPFFRFRACAVVDS-ESFFIISVSFdiqVCCRFI------------------D 1023

                         1130      1140      1150      1160      1170      1180      1190
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063736194 1017 REGNKKDRIESDHVFIAYISSPHSI--RC---LEEKNSD--KCNFSEASLEFTVTSDTSGigvFKVLKCGLSL 1082
Cdd:PLN03210  1024 RLGNHFDSPYQPHVFSVTKKGSHLVifDCcfpLNEDNAPlaELNYDHVDIQFRLTNKNSQ---LKLKGCGIRL 1093
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 14-166 5.40e-36

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 134.03  E-value: 5.40e-36
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194   14 HQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNY-ADKGEPLETLLTK-IHDSKIALAIFSGKYTESTWCLRELAMIK 91
Cdd:pfam01582    1 YDVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRdLEPGEAIAPELLSaIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063736194   92 DCVEKGKLVAIPIFYKVDPSTVRGVRGQFGDAFRDLEER-DVIKKKEWKQALKWIPGLIGItvHDKSPESEILNEI 166
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVlTEEKVLKWRGALNEVANIWHS--KSVSDESKFWKKI 154
TIR smart00255
Toll - interleukin 1 - resistance;
13-148 1.59e-29

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 114.73  E-value: 1.59e-29
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    13 QHQVFINFRG-EDLRLGFVSHLVEALENDNIKVFIDNYADKGEPLETLLTKIHDSKIALAIFSGKYTESTWCLRELAMIK 91
Cdd:smart00255    1 EYDVFISYSGkEDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    92 DCVEK-GKLVAIPIFYKVDPSTVRGVRGQFGDAFRD--LEERDVIKKKEWKQALKWIPGL 148
Cdd:smart00255   81 ENALEeGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKnyLKWPEDEKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
637-868 5.70e-22

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 100.01  E-value: 5.70e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  637 INLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLEslrdvNLTSLKTLTLSNCs 716
Cdd:COG4886     50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELS-----NLTNLESLDLSGN- 123

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  717 NFKEFPLI---PENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKvLETIPTCVSELKTLQKLVLSGCsKLKEFP-EI 792
Cdd:COG4886    124 QLTDLPEElanLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQ-LTDLPEELGNLTNLKELDLSNN-QITDLPePL 201

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  793 NK-SSLKILLLDGTSIKTMP----QLPSVQYLCLSRNdHLIYLPAgINQVSQLTRLDLKYcTKLTYVPELP--PTLQYLD 865
Cdd:COG4886    202 GNlTNLEELDLSGNQLTDLPeplaNLTNLETLDLSNN-QLTDLPE-LGNLTNLEELDLSN-NQLTDLPPLAnlTNLKTLD 278


                   ...
gi 1063736194  866 AHG 868
Cdd:COG4886    279 LSN 281
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
627-847 2.66e-21

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 98.08  E-value: 2.66e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  627 LEELPNDFDPINLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGcTSLESLRDV--NL 704
Cdd:COG4886     57 LRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSG-NQLTDLPEElaNL 135

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  705 TSLKTLTLSNCsNFKEFPL-IPE--NLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKvLETIPTCVSELKTLQKLVLS 781
Cdd:COG4886    136 TNLKELDLSNN-QLTDLPEpLGNltNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQ-ITDLPEPLGNLTNLEELDLS 213

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063736194  782 GCsKLKEFPE--INKSSLKILLLDGTSIKTMP---QLPSVQYLCLSRNdHLIYLPAgINQVSQLTRLDLKY 847
Cdd:COG4886    214 GN-QLTDLPEplANLTNLETLDLSNNQLTDLPelgNLTNLEELDLSNN-QLTDLPP-LANLTNLKTLDLSN 281
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 16-132 1.61e-12

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 65.41  E-value: 1.61e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194   16 VFINFRGEDLRlgFVSHLVEALENDNIKVFIDNY-ADKGEPLETLLTK-IHDSKIALAIFSGKYTESTWCLRELAMIKDC 93
Cdd:pfam13676    1 VFISYAGEDRA--WAEWLADALEAAGYRVWLDRWdIRPGDDWVEEIEEaIENSDRVLVVLSPNYLESPWCRAEWEAALAD 78

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1063736194   94 VEKGKLVaIPIFYKVDPSTVRGVRGQFGDAFRDLEERDV 132
Cdd:pfam13676   79 PEGRKRL-IPVRLECDLELPGLAGLQYIDLRDGDEFDAF 116
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
637-869 1.99e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 70.73  E-value: 1.99e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  637 INLVDLKLPYSEIERLWDGVKDTPVLKWVDLNHSSKLCSLSGLSKAQNLQRLNLEGCTSLESLRDVNLTSLKTLTLSNCS 716
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  717 NFKEFPLIPENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKvLETIPTCVSELKTLQKLVLSGCsKLKEFPEI--NK 794
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNN-QLTDLPEPlgNL 158

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  795 SSLKILLLDGTSIKTMP----QLPSVQYLCLSRNdHLIYLPAGINQVSQLTRLDLkYCTKLTYVP-ELP--PTLQYLDAH 867
Cdd:COG4886    159 TNLKSLDLSNNQLTDLPeelgNLTNLKELDLSNN-QITDLPEPLGNLTNLEELDL-SGNQLTDLPePLAnlTNLETLDLS 236


                   ..
gi 1063736194  868 GC 869
Cdd:COG4886    237 NN 238
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
562-813 2.84e-12

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 70.35  E-value: 2.84e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  562 LDLSEVKVeTSLDrEHFKNMRNLRYLKLYnshcphecltNNKINmpdglELPLkevrclhwlkfPLEELPndfdpiNLVD 641
Cdd:COG4886    118 LDLSGNQL-TDLP-EELANLTNLKELDLS----------NNQLT-----DLPE-----------PLGNLT------NLKS 163

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  642 LKLPYSEIERLWDGVKDTPVLKWVDLNHsSKLCSLSG-LSKAQNLQRLNLEGC--TSL-ESLRdvNLTSLKTLTLSNCsN 717
Cdd:COG4886    164 LDLSNNQLTDLPEELGNLTNLKELDLSN-NQITDLPEpLGNLTNLEELDLSGNqlTDLpEPLA--NLTNLETLDLSNN-Q 239

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  718 FKEFPLIPE--NLKALYLDGTSISQLPDNvGNLKRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSKLKEFPEINKS 795
Cdd:COG4886    240 LTDLPELGNltNLEELDLSNNQLTDLPPL-ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLL 318

                          250
                   ....*....|....*...
gi 1063736194  796 SLKILLLDGTSIKTMPQL 813
Cdd:COG4886    319 LLTTLLLLLLLLKGLLVT 336
PLN03194 PLN03194
putative disease resistance protein; Provisional
 6-114 2.39e-11

putative disease resistance protein; Provisional


Pssm-ID: 215626 [Multi-domain]  Cd Length: 187  Bit Score: 64.07  E-value: 2.39e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194    6 SSTGLPPQHQVFINFRGEDLRLGFVSHLVEALENDNIKVFIDNYADK-GEPL-ETLLTKIHDSKIALAIFSGKYTESTWC 83
Cdd:PLN03194    19 SSSSSAKPCDVFINHRGIDTKRTIATLLYDHLSRLNLRPFLDNKNMKpGDKLfDKINSAIRNCKVGVAVFSPRYCESYFC 98

                           90       100       110
                   ....*....|....*....|....*....|.
gi 1063736194   84 LRELAMIkdcVEKGKLVaIPIFYKVDPSTVR 114
Cdd:PLN03194    99 LHELALI---MESKKRV-IPIFCDVKPSQLR 125
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
724-891 3.57e-10

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 64.33  E-value: 3.57e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  724 IPENLKALYLDGTSISQLPDNV-GNLKRLVLLNMKDCKVLETIPtcvselKTLQKLVLSgCSKLKEFPEINKSSLKILLL 802
Cdd:PRK15370   197 IPEQITTLILDNNELKSLPENLqGNIKTLYANSNQLTSIPATLP------DTIQEMELS-INRITELPERLPSALQSLDL 269

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  803 DGTSIKTMPQ-LP-SVQYLCLSRNDhLIYLPAGINqvSQLTRLDLkYCTKLTYVPE-LPPTLQYLDA--HGCSSLKNVAK 877
Cdd:PRK15370   270 FHNKISCLPEnLPeELRYLSVYDNS-IRTLPAHLP--SGITHLNV-QSNSLTALPEtLPPGLKTLEAgeNALTSLPASLP 345

                          170
                   ....*....|....
gi 1063736194  878 PLARIMSTVQNHYT 891
Cdd:PRK15370   346 PELQVLDVSKNQIT 359
C-JID pfam20160
C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron ...
 938-1087 1.30e-09

C-JID domain; C-terminal jelly roll/Ig-like domain (C-JID) was defined in cryogenic electron microscopy (cryoEM) structures of plant intracellular immune receptors containing Toll/interleukin-1 receptor (TIR, PF01582), nucleotide-binding (NB-ARC, PF00931) and leucine-rich repeat (LRR) domains (TIR-NLRs). Structurally, the C-JID core is represented by a beta-sandwich made up of 8 to 9 beta-strands. C-JID matches the so-called post LRR domain originally detected via a set of MEME motifs. The domain showed a strong distribution bias towards TIR-NLRs of dicotyledonous plant species despite broader taxonomic distribution of TIR-NLR in plant groups. Structure-function analyses of cryoEM structures suggest that C-JID domains play a role in substrate-recognition, such as binding to effector proteins from pathogens, and thus are involved in the initiation of signaling by TIR-NLR receptors. Presence of C-JID (or post-LRR) and its importance for the function of Arabidopsis TIR-NLR RPS4 that partners with RRS1 for effector recognition suggest that C-JID has additional functions.


Pssm-ID: 466313  Cd Length: 108  Bit Score: 56.69  E-value: 1.30e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  938 FPGCEVPSWFGHEAVGSLLQRKLLPHWHDKRLSGIALCAVVSFPDSqdqLSCFS-VTCTFKIkaedkswvPFtcpVGIWT 1016
Cdd:pfam20160    1 LPGSQIPEWFNHQSTGSSISIKLPENWYNDNFLGFAVCAVGSLIPS---LHNFLgYIHFFLI--------PL---VSLWD 66

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063736194 1017 REGNKkdriesdhvfiayissphsircleEKNSDKCNFSEASLEFtvtsdtsGIGVFKVLKCGLSLVYEND 1087
Cdd:pfam20160   67 TSKAN------------------------GKTPNDYGRIEASFEF-------PSDLHEIKQCGVRLIYKDE 106
NB-ARC pfam00931
NB-ARC domain;
210-456 8.82e-09

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 57.39  E-value: 8.82e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  210 IKQRLKELEEKLDlvKYKGTRVIGVVGMPGIGKTTLVKELYK---TWQGKFSRYALIDQIRGKSNNFRLECLPTLLLEKL 286
Cdd:pfam00931    1 REDMVEKVIGKLS--EKDEPGIVGIHGMGGVGKTTLAAQIFNdfdEVEGHFDSVAWVVVSKTFTISTLQQTILQNLGLSE 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  287 LPELNNPQLDSIEEPYKthkgLLRERKVLVVLDDVSRR---EQIYALLGKYDLhskhewikdGSRIIIAT--NDISSLKG 361
Cdd:pfam00931   79 DDWDNKEEGELARKIRR----ALLTKRFLLVLDDVWDEedwDKIGIPLPDREN---------GCRVLLTTrsEEVAGRVG 145

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  362 LVHDTYVVRQLNHRDGLQLFRYHAFHYDQATPPKVDfmKLSDEFVHYARGHPLALKILGRELYEKNMKH-WETKLIILAQ 440
Cdd:pfam00931  146 GPSDPHEVELLEPDEAWELFENKVFPKTLGECELLE--DVAKEIVEKCRGLPLALKVLGGLLSCKKTVEeWKHVYDVLQS 223

                          250       260
                   ....*....|....*....|..
gi 1063736194  441 SPTT------YIGEVVQVSYDE 456
Cdd:pfam00931  224 ELKSnsyslnSVRSILQLSYEN 245
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 638-657 7.90e-06

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 43.48  E-value: 7.90e-06
                           10        20
                   ....*....|....*....|
gi 1063736194  638 NLVDLKLPYSEIERLWDGVK 657
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGVK 20
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
562-802 4.07e-05

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 47.62  E-value: 4.07e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  562 LDLSEVKVeTSLDREhFKNMRNLRYLklynshcpheCLTNNKINmpdglELPLkevrclhwlkfPLEELPndfdpiNLVD 641
Cdd:COG4886    164 LDLSNNQL-TDLPEE-LGNLTNLKEL----------DLSNNQIT-----DLPE-----------PLGNLT------NLEE 209

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  642 LKLPYSEIERLWDGVKDTPVLKWVDLNHsSKLCSLSGLSKAQNLQRLNLEGC--TSLESLrdVNLTSLKTLTLSNCsnfk 719
Cdd:COG4886    210 LDLSGNQLTDLPEPLANLTNLETLDLSN-NQLTDLPELGNLTNLEELDLSNNqlTDLPPL--ANLTNLKTLDLSNN---- 282

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  720 efPLIPENLKALYLDGTSISQLPDNVGNLKRLVLLNMKDCKVLETIPTCVSELKTLQKLVLSGCSKLKEFPEINKSSLKI 799
Cdd:COG4886    283 --QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLS 360


                   ...
gi 1063736194  800 LLL 802
Cdd:COG4886    361 LLL 363
PRK15387 PRK15387
type III secretion system effector E3 ubiquitin transferase SspH2;
698-846 4.42e-05

type III secretion system effector E3 ubiquitin transferase SspH2;


Pssm-ID: 185285 [Multi-domain]  Cd Length: 788  Bit Score: 47.85  E-value: 4.42e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  698 SLRDVNLTSLKTLTLSNC------SNFKEFPLIPENLKALYLDGTSISQLPDNVGNLKRLVLLNMKdckvLETIPTCVSE 771
Cdd:PRK15387   308 SVSDNQLASLPALPSELCklwaynNQLTSLPTLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNR----LTSLPALPSG 383

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1063736194  772 LKtlqKLVLSGcSKLKEFPeINKSSLKILLLDGTSIKTMPQLPS-VQYLCLSRNdHLIYLPAGINQVSQLTRLDLK 846
Cdd:PRK15387   384 LK---ELIVSG-NRLTSLP-VLPSELKELMVSGNRLTSLPMLPSgLLSLSVYRN-QLTRLPESLIHLSSETTVNLE 453
AAA smart00382
ATPases associated with a variety of cellular activities; AAA - ATPases associated with a ...
 230-361 4.95e-05

ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.


Pssm-ID: 214640 [Multi-domain]  Cd Length: 148  Bit Score: 44.67  E-value: 4.95e-05
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194   230 RVIGVVGMPGIGKTTLVKELYKTWQGKFSRYALIDqirgkSNNFRLEclPTLLLEKLLPELNNPQLDSIEEPYKTHKGLL 309
Cdd:smart00382    3 EVILIVGPPGSGKTTLARALARELGPPGGGVIYID-----GEDILEE--VLDQLLLIIVGGKKASGSGELRLRLALALAR 75

                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*
gi 1063736194   310 RERKVLVVLDDVSR---REQIYALLGKYDLHSKHEWIKDGSRIIIATNDISSLKG 361
Cdd:smart00382   76 KLKPDVLILDEITSlldAEQEALLLLLEELRLLLLLKSEKNLTVILTTNDEKDLG 130
PRK15387 PRK15387
type III secretion system effector E3 ubiquitin transferase SspH2;
704-868 8.22e-04

type III secretion system effector E3 ubiquitin transferase SspH2;


Pssm-ID: 185285 [Multi-domain]  Cd Length: 788  Bit Score: 43.61  E-value: 8.22e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  704 LTSLKTL-----TLSNCSN-FKEFPLIPENLKALYLDGTSISQLPDNVGNLKRLVLLNMKdckvLETIPTCVSELKTLqk 777
Cdd:PRK15387   254 LTSLPVLppgllELSIFSNpLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQ----LASLPALPSELCKL-- 327

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  778 lvLSGCSKLKEFPEInKSSLKILLLDGTSIKTMPQLPSVQYLCLSRNDHLIYLPAGINQVSQLtrldLKYCTKLTYVPEL 857
Cdd:PRK15387   328 --WAYNNQLTSLPTL-PSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKEL----IVSGNRLTSLPVL 400

                          170
                   ....*....|.
gi 1063736194  858 PPTLQYLDAHG 868
Cdd:PRK15387   401 PSELKELMVSG 411
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 703-871 1.47e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 42.91  E-value: 1.47e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  703 NLTSLKTLTLSNCSNFKEFPL---IPENLKALYLDGTSIS-------------------------QLPDNVGNLKRLVLL 754
Cdd:PLN00113   186 NLTSLEFLTLASNQLVGQIPRelgQMKSLKWIYLGYNNLSgeipyeiggltslnhldlvynnltgPIPSSLGNLKNLQYL 265

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  755 NMKDCKVLETIPTCVSELKTLQKLVLSGCSKLKEFPE--INKSSLKILLL-----DGTSIKTMPQLPSVQYLCLSRNDHL 827
Cdd:PLN00113   266 FLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPElvIQLQNLEILHLfsnnfTGKIPVALTSLPRLQVLQLWSNKFS 345

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....
gi 1063736194  828 IYLPAGINQVSQLTRLDLKyCTKLTyvPELPPTLqyldahgCSS 871
Cdd:PLN00113   346 GEIPKNLGKHNNLTVLDLS-TNNLT--GEIPEGL-------CSS 379
COG3899 COG3899
Predicted ATPase [General function prediction only];
214-471 5.34e-03

Predicted ATPase [General function prediction only];


Pssm-ID: 443106 [Multi-domain]  Cd Length: 1244  Bit Score: 41.00  E-value: 5.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  214 LKELEEKLDLVKYKGTRVIGVVGMPGIGKTTLVKELYK--------TWQGKFSRY-------ALIDQIRGKSNNFRLECL 278
Cdd:COG3899    296 LAALLAALERARAGRGELVLVSGEAGIGKSRLVRELARrararggrVLRGKCDQLergvpyaPLAQALRALLGQLPEDEL 375

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  279 PTLLLEKLLPELNN-----------------PQLDSIEEPYKTHKGLLR-------ERKVLVVLDDV------------- 321
Cdd:COG3899    376 AAWRARLLAALGANgrlladllpelelqpapPELDPEEARNRLFRALLRllralaaERPLVLVLDDLhwadpaslellef 455

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  322 --SRREQIY-ALLGKY---DLHSKHewikdgsRIIIATNDISSLKGLVHdTYVVRQLNHRDGLQLFRyHAFHYDQATPPk 395
Cdd:COG3899    456 llRRLRDLPlLLVGTYrpeEVPPAH-------PLRLLLAELRRAGAGVT-RLELGPLSREEVAALVA-DLLGAAELPAE- 525

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063736194  396 vdfmkLSDEFVHYARGHPLALKILGRELYEKNM-----KHWETKLIILAQSPTTYIGEVVQVSYDELSLAQKDAFLDIAC 470
Cdd:COG3899    526 -----LAELLVERTGGNPFFLEELLRALLEEGLlrfdgGGWRWDAALAALALPDTVVDLLAARLDRLPPAARRVLRLAAV 600


                   .
gi 1063736194  471 F 471
Cdd:COG3899    601 L 601
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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