|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
103-378 |
1.15e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 1.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 103 QLQQKISSLEIKLKVSEEEKQRIKQDVESLMEKHNVLEKGFLKEKEQEAISfQDRYKELQEKHKQELEDMRKAGHEALSI 182
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL-LAELARLEQDIARLEERRRELEERLEEL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 183 IVDEYKALLQ-SSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRL-LEMLDTEKELLKEKIKEALIQQSQEQKEILEK 260
Cdd:COG1196 322 EEELAELEEElEELEEELEELEEELEEAEEELEEAEAELAEAEEALLeAEAELAEAEEELEELAEELLEALRAAAELAAQ 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 261 CLEEERQRNKEALVSAAKLEKEAVKDAVLKVVEEERKNLEKAhAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETV 340
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA-LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
250 260 270
....*....|....*....|....*....|....*...
gi 1200742260 341 KAAIIEEQKRSEKAVEEAVKRTRDELIEYIKEQKRLDQ 378
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
102-358 |
1.36e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 1.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 102 IQLQQKISSLEIKLKVSEEEKQRIKQDVESLMEKHNVLEKGfLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALS 181
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE-LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAE 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 182 IIVDEYKALLQSSVKQQVEAIEKQYISAIEKQAhkceellnAQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEkc 261
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAE--------EALLERLERLEEELEELEEALAELEEEEEEEEEALEE-- 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 262 LEEERQRNKEALVSAAKLEKEAVKDAVLKVVEEERKNLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVK 341
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAV 526
|
250
....*....|....*..
gi 1200742260 342 AAIIEEQKRSEKAVEEA 358
Cdd:COG1196 527 AVLIGVEAAYEAALEAA 543
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
144-409 |
1.18e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.17 E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 144 LKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAIEKQAHKCEELLNA 223
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 224 QHQRLLEMLDTEKELLKEkikealIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAVKDavlkvvEEERKNLEKAH 303
Cdd:COG1196 314 LEERLEELEEELAELEEE------LEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEA------EAELAEAEEEL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 304 AEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIEYIKEQKRLDQVIRQR 383
Cdd:COG1196 382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
250 260
....*....|....*....|....*.
gi 1200742260 384 SLSSLELFLSCAQKQLSALIATEPVD 409
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELA 487
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
114-382 |
1.35e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.79 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 114 KLKVSEEEKQRIKQDVESLMEKHNVLEKGfLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSIIVD-EYKALLQ 192
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAE-LAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDiARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 193 SSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQrlLEMLDTEKELLKEKIKEALIQQSQEQKEILEKclEEERQRNKEA 272
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEE--LEEAEEELEEAEAELAEAEEALLEAEAELAEA--EEELEELAEE 387
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 273 LVSAAKLEKEAVKD-AVLKVVEEERKNLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRS 351
Cdd:COG1196 388 LLEALRAAAELAAQlEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
250 260 270
....*....|....*....|....*....|.
gi 1200742260 352 EKAVEEAVKRTRDELIEYIKEQKRLDQVIRQ 382
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
105-398 |
2.59e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.75 E-value: 2.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 105 QQKISSLEIKLKVSEEEK-QRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAgHEALSII 183
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKaDEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA-DEAKKKA 1453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 184 VDEYKAllQSSVKQQVEAIEKQYISAIEKQAHKCEELlNAQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLE 263
Cdd:PTZ00121 1454 EEAKKA--EEAKKKAEEAKKADEAKKKAEEAKKADEA-KKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA 1530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 264 EERQRNKEALVSAAKLEKEAVKDAV-LKVVEEERKNLEKAHAEERELWKTEHA----KDQEKVSQEIQKAIQEQRKISQE 338
Cdd:PTZ00121 1531 EEAKKADEAKKAEEKKKADELKKAEeLKKAEEKKKAEEAKKAEEDKNMALRKAeeakKAEEARIEEVMKLYEEEKKMKAE 1610
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 339 TVKAAIIEEQKRSEKAVEEAVKRTRDELIEYIKEQKRLDQVIRQRSLSSLELFLSCAQKQ 398
Cdd:PTZ00121 1611 EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
119-411 |
6.52e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 48.20 E-value: 6.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 119 EEEKQRIKQ-DVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGhealsiIVDEYKALLQSSVKQ 197
Cdd:pfam17380 347 ERELERIRQeERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVK------ILEEERQRKIQQQKV 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 198 QVEAIEKQYISAIEKQAHKCEELLNAQHQRLlemldTEKELLKEKIKEALIQQSQEQKeilEKCLEEERQRNKEALVSaa 277
Cdd:pfam17380 421 EMEQIRAEQEEARQREVRRLEEERAREMERV-----RLEEQERQQQVERLRQQEEERK---RKKLELEKEKRDRKRAE-- 490
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 278 klekeavkdavlkvvEEERKNLEKAHAEERELWKTEHAKDQ--EKVSQEIQKAIQEQRkisqetvKAAIIEEQKRSEKAV 355
Cdd:pfam17380 491 ---------------EQRRKILEKELEERKQAMIEEERKRKllEKEMEERQKAIYEEE-------RRREAEEERRKQQEM 548
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1200742260 356 EEAvKRTRDELIEYIKEQKRLDQVIRQRSLSSLELFLSCAQKQLSAliATEPVDIE 411
Cdd:pfam17380 549 EER-RRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAEYEA--TTPITTIK 601
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
116-374 |
1.24e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 116 KVSEEEKQRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQEL---EDMRKAgHEALSIIVDEYKALLQ 192
Cdd:PTZ00121 1504 KAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELkkaEEKKKA-EEAKKAEEDKNMALRK 1582
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 193 SSVKQQVEA--IEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNK 270
Cdd:PTZ00121 1583 AEEAKKAEEarIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK 1662
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 271 EALVSAAKLEKEAVKDAVLKVVEEERKNLEKAHAEERELWKTEHAKDQE----KVSQEIQKAiQEQRKISQETVKAAIIE 346
Cdd:PTZ00121 1663 AAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEaeekKKAEELKKA-EEENKIKAEEAKKEAEE 1741
|
250 260
....*....|....*....|....*...
gi 1200742260 347 EQKRSEKAVEEAVKRTRDELIEYIKEQK 374
Cdd:PTZ00121 1742 DKKKAEEAKKDEEEKKKIAHLKKEEEKK 1769
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
112-377 |
1.33e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 112 EIKLKVSEEEKQRIKQDVESLmEKHNVLEKGFLKEKEQEAISFQDRyKELQEKHKQELEDMRKAGHEALSIIVDEYKALL 191
Cdd:PTZ00121 1531 EEAKKADEAKKAEEKKKADEL-KKAEELKKAEEKKKAEEAKKAEED-KNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK 1608
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 192 QSSVKQQVEA-IEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEALIQQSQEQ--KEILEKCLEEERQR 268
Cdd:PTZ00121 1609 AEEAKKAEEAkIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEdkKKAEEAKKAEEDEK 1688
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 269 NKEALVSAAKLEKEAVKDAVLKVVEEERKNLEKAHAEERELWKTEHAKDQE----KVSQEIQKAIQEQRKISQETVKAAI 344
Cdd:PTZ00121 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAeedkKKAEEAKKDEEEKKKIAHLKKEEEK 1768
|
250 260 270
....*....|....*....|....*....|....*
gi 1200742260 345 IEEQKRSEK--AVEEAVKRtRDELIEYIKEQKRLD 377
Cdd:PTZ00121 1769 KAEEIRKEKeaVIEEELDE-EDEKRRMEVDKKIKD 1802
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
135-382 |
6.11e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.43 E-value: 6.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 135 KHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEalsiivdeyKALLQSSVKQQVEAIEKQYISAIEKQA 214
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEE---------LSRQISALRKDLARLEAEVEQLEERIA 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 215 HKCEELLNAQHQRllEMLDTEKELLKEKIKEALIQQSQEQKEILEkcLEEERQRNKEALvSAAKLEKEAVKDAVLKVVEE 294
Cdd:TIGR02168 751 QLSKELTELEAEI--EELEERLEEAEEELAEAEAEIEELEAQIEQ--LKEELKALREAL-DELRAELTLLNEEAANLRER 825
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 295 ERKNLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKaVEEAVKRTRDELIEYIKEQK 374
Cdd:TIGR02168 826 LESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS-LEEALALLRSELEELSEELR 904
|
....*...
gi 1200742260 375 RLDQVIRQ 382
Cdd:TIGR02168 905 ELESKRSE 912
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
160-382 |
8.30e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 8.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 160 ELQEKHKQELEDMRKAGHEALSIIVDEYKAllQSSVKQQVEAIEKQyISAIEKQAHKCEELLNAQHQRLlemldTEKELL 239
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKE--EKALLKQLAALERR-IAALARRIRALEQELAALEAEL-----AELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 240 KEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAVKDAVLKVVEEERKNLEKAHAEER-ELWKTEHAKDQ 318
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLaELAALRAELEA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1200742260 319 EKVSQEIQKAIQEQRKISQETVKAaiieEQKRSEKAVEEAVKRTRDELIEYIKEQKRLDQVIRQ 382
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKA----ERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
103-377 |
2.72e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.51 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 103 QLQQKISSLEIKLKVSEEEKQRIKQDVESL------MEKHNVLEKGFLKEKEQEAISFQDRYkELQEKHKQELEDMRKAG 176
Cdd:TIGR02168 688 ELEEKIAELEKALAELRKELEELEEELEQLrkeleeLSRQISALRKDLARLEAEVEQLEERI-AQLSKELTELEAEIEEL 766
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 177 HEALSIIVDEYKALLQ--SSVKQQVEAIEKQyISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKI-KEALIQQSQE 253
Cdd:TIGR02168 767 EERLEEAEEELAEAEAeiEELEAQIEQLKEE-LKALREALDELRAELTLLNEEAANLRERLESLERRIAaTERRLEDLEE 845
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 254 QKEILEKCLEEERQRNKEALVSAAKLEKEavkdavLKVVEEERKNLEKAHAEERElwktehakDQEKVSQEIQKAIQEQR 333
Cdd:TIGR02168 846 QIEELSEDIESLAAEIEELEELIEELESE------LEALLNERASLEEALALLRS--------ELEELSEELRELESKRS 911
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1200742260 334 KISQETVKAaiiEEQKRSEKAVEEAVKRTRDELIEYIKEQKRLD 377
Cdd:TIGR02168 912 ELRRELEEL---REKLAQLELRLEGLEVRIDNLQERLSEEYSLT 952
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
114-375 |
2.93e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 2.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 114 KLKVSEEEKQRIKQDVESLMEKHNVLEKgflkekEQEAISFQDRYKELQEKHKQELEDMRKAghEALSIIVDEYKALLQS 193
Cdd:PTZ00121 1358 EAEAAEEKAEAAEKKKEEAKKKADAAKK------KAEEKKKADEAKKKAEEDKKKADELKKA--AAAKKKADEAKKKAEE 1429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 194 SVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEAL 273
Cdd:PTZ00121 1430 KKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAK 1509
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 274 VSAAKLEK--EAVKDAVLKVVEEERKNLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRS 351
Cdd:PTZ00121 1510 KKADEAKKaeEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKA 1589
|
250 260
....*....|....*....|....
gi 1200742260 352 EKAVEEAVKRTRDELIEYIKEQKR 375
Cdd:PTZ00121 1590 EEARIEEVMKLYEEEKKMKAEEAK 1613
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
115-301 |
4.98e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 4.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 115 LKVSEEEKQRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQELEDMR--KAGHEALSIIVDEYKALLQ 192
Cdd:COG4913 254 LEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELErlEARLDALREELDELEAQIR 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 193 SSVKQQVEAIEKQyISAIEKQAHKCEELLNAQHQRL----LEMLDTEKELlkekikEALIQQSQEQKEILEKCLEEERQR 268
Cdd:COG4913 334 GNGGDRLEQLERE-IERLERELEERERRRARLEALLaalgLPLPASAEEF------AALRAEAAALLEALEEELEALEEA 406
|
170 180 190
....*....|....*....|....*....|...
gi 1200742260 269 NKEALVSAAKLEKEavkdavLKVVEEERKNLEK 301
Cdd:COG4913 407 LAEAEAALRDLRRE------LRELEAEIASLER 433
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
103-374 |
5.34e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.35 E-value: 5.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 103 QLQQKISSLEIKLKVSEEEKQRIKQDVESLMEKHNVLEKGF-------------LKEKEQEAISFQDRYKELQEKHKQEL 169
Cdd:TIGR02168 243 ELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIeelqkelyalaneISRLEQQKQILRERLANLERQLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 170 EDMRKAGHEAlsiivDEYKALLQsSVKQQVEAIEKQYISAIEKQAHKCEELLNAqhQRLLEMLDTEKELLKEKIKEALIQ 249
Cdd:TIGR02168 323 AQLEELESKL-----DELAEELA-ELEEKLEELKEELESLEAELEELEAELEEL--ESRLEELEEQLETLRSKVAQLELQ 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 250 QSQEQKEILE-----KCLEEERQRNKEALVSAAKLEKEAVKDAVLKVVEEERKNLEKAHAEERELWKTEhakdqEKVSQE 324
Cdd:TIGR02168 395 IASLNNEIERlearlERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEAL-----EELREE 469
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1200742260 325 IQKAIQEQRKISQEtvkaaiiEEQKRSEKAVEEAVKRTRDELIEYIKEQK 374
Cdd:TIGR02168 470 LEEAEQALDAAERE-------LAQLQARLDSLERLQENLEGFSEGVKALL 512
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
157-383 |
5.72e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.36 E-value: 5.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 157 RYKELQEKhKQELEdmrkagheaLSIIVDEYKALLQssvkqQVEAIEKQyISAIEKQAHKCEELLNAQHQRLLEMLDTEK 236
Cdd:TIGR02169 212 RYQALLKE-KREYE---------GYELLKEKEALER-----QKEAIERQ-LASLEEELEKLTEEISELEKRLEEIEQLLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 237 ELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEAlvsAAKLEKEAVKDAVLKVVEEERKNLEKAHAEERELwkTEHAK 316
Cdd:TIGR02169 276 ELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIA---EKERELEDAEERLAKLEAEIDKLLAEIEELEREI--EEERK 350
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1200742260 317 DQEKVSQEIQKAIQEQRKISQEtvkaaiIEEqkrsekaVEEAVKRTRDELIEYikeQKRLDQVIRQR 383
Cdd:TIGR02169 351 RRDKLTEEYAELKEELEDLRAE------LEE-------VDKEFAETRDELKDY---REKLEKLKREI 401
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
159-382 |
1.07e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 159 KELQEKHKQELEDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKEL 238
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADE 1319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 239 LKEKIKEALiQQSQEQKEILEKCLEEERQRNKEALVSAAKLEK-EAVKDAVLKVVEEERKNLEKAHAEERELWKTEHAK- 316
Cdd:PTZ00121 1320 AKKKAEEAK-KKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAaEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKk 1398
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 317 ---DQEKVSQEIQKAIQEQRKISQETVKAaiiEEQKRSEKAVEEAV-KRTRDELIEYIKEQKRLDQVIRQ 382
Cdd:PTZ00121 1399 kaeEDKKKADELKKAAAAKKKADEAKKKA---EEKKKADEAKKKAEeAKKADEAKKKAEEAKKAEEAKKK 1465
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
135-379 |
1.10e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.28 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 135 KHNVLEKGFLKEKEQEAISFQDRYKelQEKHKQELEDMRKAghEALSIIVDEYKALLQSSVKQQVEAIEKQYISAIEKQA 214
Cdd:PTZ00121 1279 KADELKKAEEKKKADEAKKAEEKKK--ADEAKKKAEEAKKA--DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEA 1354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 215 HKcEELLNAQHQRLLEMLDTEKEllkEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAVKDAVLKVVEE 294
Cdd:PTZ00121 1355 AA-DEAEAAEEKAEAAEKKKEEA---KKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEK 1430
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 295 ERKNLEKAHAEERElwKTEHAK---DQEKVSQEIQKAIQEQRKISQETVKAaiiEEQKRSEKAVEEA--VKRTRDELIEY 369
Cdd:PTZ00121 1431 KKADEAKKKAEEAK--KADEAKkkaEEAKKAEEAKKKAEEAKKADEAKKKA---EEAKKADEAKKKAeeAKKKADEAKKA 1505
|
250
....*....|
gi 1200742260 370 IKEQKRLDQV 379
Cdd:PTZ00121 1506 AEAKKKADEA 1515
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
103-311 |
1.80e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 103 QLQQKISSLEIKLKVSEEEKQRIKQDVESLMEKhnvlekgfLKEKEQEAISFQDRYKELQEKHKQELEDMRKAGHEALSI 182
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLEELKEELESLEAE--------LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASL 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 183 ivdeykALLQSSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEaliqqsQEQKEILEKCL 262
Cdd:TIGR02168 399 ------NNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEE------LERLEEALEEL 466
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1200742260 263 EEERQRNKEALVSAAklEKEAVKDAVLKVVEEERKNLEKAHAEERELWK 311
Cdd:TIGR02168 467 REELEEAEQALDAAE--RELAQLQARLDSLERLQENLEGFSEGVKALLK 513
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
103-367 |
2.71e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 103 QLQQKISSLEIKLKVSEEEKQRIKQDVESLMEKHNVLEKgFLKEKEQEAISFQDRYKELQEKHKQeledmrkaghealsi 182
Cdd:COG4942 31 QLQQEIAELEKELAALKKEEKALLKQLAALERRIAALAR-RIRALEQELAALEAELAELEKEIAE--------------- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 183 ivdeykalLQSSVKQQVEAIEKQYISAIEKQAHKCEELL-----NAQHQRLLEMLDTEKELLKEKIKEalIQQSQEQKEI 257
Cdd:COG4942 95 --------LRAELEAQKEELAELLRALYRLGRQPPLALLlspedFLDAVRRLQYLKYLAPARREQAEE--LRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 258 LEKCLEEERQRnkealvsaaklekeavKDAVLKVVEEERKNLEKAHAEERELwKTEHAKDQEKVSQEIQKAIQEQRKIsQ 337
Cdd:COG4942 165 LRAELEAERAE----------------LEALLAELEEERAALEALKAERQKL-LARLEKELAELAAELAELQQEAEEL-E 226
|
250 260 270
....*....|....*....|....*....|
gi 1200742260 338 ETVKAAIIEEQKRSEKAVEEAVKRTRDELI 367
Cdd:COG4942 227 ALIARLEAEAAAAAERTPAAGFAALKGKLP 256
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
170-378 |
5.01e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.35 E-value: 5.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 170 EDMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQyisaieKQAHKCEELLNAQHQRLLEMLDTEKELLKekiKEALIQ 249
Cdd:PTZ00121 1173 EDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKA------EEERKAEEARKAEDAKKAEAVKKAEEAKK---DAEEAK 1243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 250 QSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAVKDAVLKVVEEERKNLEKAHAEERElwKTEHAK---DQEKVSQEIQ 326
Cdd:PTZ00121 1244 KAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKK--KADEAKkkaEEAKKADEAK 1321
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1200742260 327 KAIQEQRKISQETVKAAiiEEQKRSEKAVEEAVKRTRDELiEYIKEQKRLDQ 378
Cdd:PTZ00121 1322 KKAEEAKKKADAAKKKA--EEAKKAAEAAKAEAEAAADEA-EAAEEKAEAAE 1370
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
166-288 |
5.70e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 39.04 E-value: 5.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 166 KQELEDMrKAGHEALSIIVDEYKALLQSsVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKE 245
Cdd:PRK00409 515 KEKLNEL-IASLEELERELEQKAEEAEA-LLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEAQQAIKEAKKEADEIIKE 592
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1200742260 246 ALIQQSQEQKEILEKCLEEERQRNKEAL--VSAAKLEKEAVKDAV 288
Cdd:PRK00409 593 LRQLQKGGYASVKAHELIEARKRLNKANekKEKKKKKQKEKQEEL 637
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
109-295 |
8.81e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 38.22 E-value: 8.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 109 SSLEIKLKVSEEEKQRIKQDVESLMEKHNvlekgflKEKEQEAisfQDRYKELQEKHKQELEDMRKaghealsiivdEYK 188
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRILEEAKKEAEAIK-------KEALLEA---KEEIHKLRNEFEKELRERRN-----------ELQ 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 189 ALlQSSVKQQVEAIEKQyisaiekqahkcEELLNAQHQRLLEmldtekellKEKIKEALIQQSQEQKEILEKCLEEERQR 268
Cdd:PRK12704 86 KL-EKRLLQKEENLDRK------------LELLEKREEELEK---------KEKELEQKQQELEKKEEELEELIEEQLQE 143
|
170 180
....*....|....*....|....*..
gi 1200742260 269 nkeaLVSAAKLEKEAVKDAVLKVVEEE 295
Cdd:PRK12704 144 ----LERISGLTAEEAKEILLEKVEEE 166
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
114-330 |
9.20e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 38.18 E-value: 9.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 114 KLKVSEEEKQRIKQDVESLMEKhnvlekgfLKEKEQEAisFQDRYKELQEKHKQELEDMRKaghealsiivDEYKALLQS 193
Cdd:pfam17380 403 KVKILEEERQRKIQQQKVEMEQ--------IRAEQEEA--RQREVRRLEEERAREMERVRL----------EEQERQQQV 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 194 SVKQQVEAIEKQYISAIEKQAHKcEELLNAQHQRLLE--MLDTEKELLKEKIKEALIQQSQE--QKEILEkclEEERQRN 269
Cdd:pfam17380 463 ERLRQQEEERKRKKLELEKEKRD-RKRAEEQRRKILEkeLEERKQAMIEEERKRKLLEKEMEerQKAIYE---EERRREA 538
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1200742260 270 KEALVSAAKLEKEAVKDAVLKVVEEERKNLEkahAEERELWKTEHAKDQEKVSQEIQKAIQ 330
Cdd:pfam17380 539 EEERRKQQEMEERRRIQEQMRKATEERSRLE---AMEREREMMRQIVESEKARAEYEATTP 596
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
92-304 |
9.44e-03 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 38.20 E-value: 9.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 92 SEDPGANVSNIQLQQKISSLEIKLKV-SEEEKQRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQELE 170
Cdd:pfam09731 225 PEHLDNVEEKVEKAQSLAKLVDQYKElVASERIVFQQELVSIFPDIIPVLKEDNLLSNDDLNSLIAHAHREIDQLSKKLA 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1200742260 171 DMRKAGHEALSIIVDEYKALLQSSVKQQVEAIEKQYISAIEK----QAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEA 246
Cdd:pfam09731 305 ELKKREEKHIERALEKQKEELDKLAEELSARLEEVRAADEAQlrleFEREREEIRESYEEKLRTELERQAEAHEEHLKDV 384
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1200742260 247 LIQQSQE----QKEILEKCLEEERQRNKEALvSAAKLEKEAVKDAVLKVVEEERKNLeKAHA 304
Cdd:pfam09731 385 LVEQEIElqreFLQDIKEKVEEERAGRLLKL-NELLANLKGLEKATSSHSEVEDENR-KAQQ 444
|
|
| |
