|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
86-879 |
2.17e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 84.72 E-value: 2.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 86 ERVNDV-EQLKKQVSKLTTErtmwlskqqphdvnALLAEK-QELRKQLdrEQNEKQELFMQINSMIAKLADSgdQDEINR 163
Cdd:TIGR02168 189 DRLEDIlNELERQLKSLERQ--------------AEKAERyKELKAEL--RELELALLVLRLEELREELEEL--QEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 164 LKSDVNSLKRELEAEKIASNaEAARLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDS- 242
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLE-ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELe 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 243 SKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAIsvndvsrqnmDSLSEKLSEMDRTLREEQQQKSQLR 322
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRL----------EELEEQLETLRSKVAQLELQIASLN 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 323 SQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRESILFE-SGRIKELQQALSDEKDNNAILNVQLRE 401
Cdd:TIGR02168 400 NEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEElQEELERLEEALEELREELEEAEQALDA 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 402 KDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRrTEEKYQQAQKKI--ENLDETIKQQETQI 479
Cdd:TIGR02168 480 AERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELIS-VDEGYEAAIEAAlgGRLQAVVVENLNAA 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 480 RDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELT---EQR 556
Cdd:TIGR02168 559 KKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDnalELA 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 557 KVLESKASVADEFGTLM--------------SSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAE 622
Cdd:TIGR02168 639 KKLRPGYRIVTLDGDLVrpggvitggsaktnSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 623 EYIEKENHRVQNAssshDADITRLENEKTQMEEALEKADQEkDQAIREASESVRVMKREMTEASITSDRQIQSLKEKVDS 702
Cdd:TIGR02168 719 KELEELSRQISAL----RKDLARLEAEVEQLEERIAQLSKE-LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 703 LTRELESSRRRMEQLQEDQT---KFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKA 779
Cdd:TIGR02168 794 LKEELKALREALDELRAELTllnEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELES 873
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 780 QYEKADKKYEETKVQLREAEDLADrlqaaqilsgnveskfsdmqkeskiEMERILDNHNKELEKLREELKKSHTEHTSLE 859
Cdd:TIGR02168 874 ELEALLNERASLEEALALLRSELE-------------------------ELSEELRELESKRSELRRELEELREKLAQLE 928
|
810 820
....*....|....*....|
gi 1254044744 860 SVLEEQQNELAQLQDQLREE 879
Cdd:TIGR02168 929 LRLEGLEVRIDNLQERLSEE 948
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
159-888 |
1.42e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 82.04 E-value: 1.42e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 159 DEINRLKSDVNSLKRELEAEKIASNAEAarlkSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLA 238
Cdd:TIGR02169 198 QQLERLRREREKAERYQALLKEKREYEG----YELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 239 KSDSSK--TDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRqnmDSLSEKLSEMDRTLREEQQ 316
Cdd:TIGR02169 274 LEELNKkiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEI---DKLLAEIEELEREIEEERK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 317 QKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRESILFESGRIKELQQALSDEKDNNAiln 396
Cdd:TIGR02169 351 RRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNA--- 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 397 vqlrekdgKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSnnlLQDELRRTEEKYQQAQKKIENLDETIKQQE 476
Cdd:TIGR02169 428 --------AIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSK---YEQELYDLKEEYDRVEKELSKLQRELAEAE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 477 TQIRDLGRSLDEAK-----------------RQLQKMSEQRQNE-EVARQGEDSARSMEEKAT-KEEIKKLKSqvqlqqq 537
Cdd:TIGR02169 497 AQARASEERVRGGRaveevlkasiqgvhgtvAQLGSVGERYATAiEVAAGNRLNNVVVEDDAVaKEAIELLKR------- 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 538 leqdlelqkKRVQELT----EQRKVLESKASVADEFGTLMSSLNsLREENRQYE----------------EETRSLQTNI 597
Cdd:TIGR02169 570 ---------RKAGRATflplNKMRDERRDLSILSEDGVIGFAVD-LVEFDPKYEpafkyvfgdtlvvediEAARRLMGKY 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 598 R--TLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASsshdADITRLENEKTQMEEALEKADQEKDQAIREASESV 675
Cdd:TIGR02169 640 RmvTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLR----ERLEGLKRELSSLQSELRRIENRLDELSQELSDAS 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 676 RVMKREMTEASI------TSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDqtkflgshdetKAEMMKDLHEAQDEIEKL 749
Cdd:TIGR02169 716 RKIGEIEKEIEQleqeeeKLKERLEELEEDLSSLEQEIENVKSELKELEAR-----------IEELEEDLHKLEEALNDL 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 750 tnQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKI- 828
Cdd:TIGR02169 785 --EARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGk 862
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1254044744 829 --EMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLV 888
Cdd:TIGR02169 863 keELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKA 924
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
377-1091 |
3.70e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.87 E-value: 3.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 377 RIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAEsRAQQAEEDVRDMKERIITSKKDDdsnnlLQDELRRTEE 456
Cdd:TIGR02168 173 RRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAE-RYKELKAELRELELALLVLRLEE-----LREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 457 KYQQAQKKIENLDETIKQQETQIRDLgrslDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQ 536
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLEEL----RLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 537 QLEQDLELQKKRVQELTEQRKvlESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKN 616
Cdd:TIGR02168 323 AQLEELESKLDELAEELAELE--EKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNN 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 617 RAEKAEEYIEKENHRVQNASSshdaditRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSL 696
Cdd:TIGR02168 401 EIERLEARLERLEDRRERLQQ-------EIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 697 KEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMkdlheAQDEIEKLTNQAGQLKSKNETLTTELE-----DSQ 771
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLK-----NQSGLSGILGVLSELISVDEGYEAAIEaalggRLQ 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 772 NLCERLKAQYEKA---DKKYEETKV------QLREAEDLADRLQAAQILSG------NVESKFSDMQK------------ 824
Cdd:TIGR02168 549 AVVVENLNAAKKAiafLKQNELGRVtflpldSIKGTEIQGNDREILKNIEGflgvakDLVKFDPKLRKalsyllggvlvv 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 825 ---ESKIEMERILD-------------------------------NHNKELEKLREELKKSHTEHTSLESVLEEQQNELA 870
Cdd:TIGR02168 629 ddlDNALELAKKLRpgyrivtldgdlvrpggvitggsaktnssilERRREIEELEEKIEELEEKIAELEKALAELRKELE 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 871 QLQDQLREEKEQssnLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKtndllaldvqklskSLD 950
Cdd:TIGR02168 709 ELEEELEQLRKE---LEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEE--------------RLE 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 951 SKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGELLKSHSAAERSLQ--MEKEKISKQFEERLKTAN 1028
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERriAATERRLEDLEEQIEELS 851
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254044744 1029 LEKTRLASELQMADSRKNTLEKQVDELQSQVETAERNRRRDLHQLDMVREELHQVKNDNEKLK 1091
Cdd:TIGR02168 852 EDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELR 914
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
35-786 |
6.32e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.10 E-value: 6.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 35 EKEASLVVRLEQELTQAQICNHRLNQQLKVlANSSDKAIKIELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKqqp 114
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEE-LQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESK--- 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 115 hdvnallaeKQELRKQLDREQNEKQELFMQINSMIAKLadsgdqDEINRLKSDVNSLKRELEAEKIASNAEAARLKSELQ 194
Cdd:TIGR02168 332 ---------LDELAEELAELEEKLEELKEELESLEAEL------EELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 195 KAKNEIQDSikdgDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSdSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQ 274
Cdd:TIGR02168 397 SLNNEIERL----EARLERLEDRRERLQQEIEELLKKLEEAELKEL-QAELEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 275 DKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNAL 354
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVV 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 355 DlKNENAQMKTStreSILFESGRIKELQQALSDEKDNNaiLNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERI 434
Cdd:TIGR02168 552 V-ENLNAAKKAI---AFLKQNELGRVTFLPLDSIKGTE--IQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGV 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 435 ITSKKDDDSNNL------------LQDEL-----------RRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKR 491
Cdd:TIGR02168 626 LVVDDLDNALELakklrpgyrivtLDGDLvrpggvitggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRK 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 492 QLQKMSEQ----RQNEEVARQGEDSARSMEEKATKEEIK---KLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESK-A 563
Cdd:TIGR02168 706 ELEELEEEleqlRKELEELSRQISALRKDLARLEAEVEQleeRIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEiE 785
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 564 SVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSShdadI 643
Cdd:TIGR02168 786 ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE----I 861
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 644 TRLENEKTQMEEALEKADQEKDQaIREASESVRVMKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQ----- 718
Cdd:TIGR02168 862 EELEELIEELESELEALLNERAS-LEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEvridn 940
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1254044744 719 ------EDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADK 786
Cdd:TIGR02168 941 lqerlsEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTE 1014
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
398-1091 |
1.98e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.09 E-value: 1.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 398 QLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDdsnnlLQDELRRTEEKYQQAQKKIENLDETIKQQET 477
Cdd:TIGR02168 214 RYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEE-----LTAELQELEEKLEELRLEVSELEEEIEELQK 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 478 QIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRK 557
Cdd:TIGR02168 289 ELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELE 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 558 VLESKASVADEfgtlmsSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYI-EKENHRVQNAS 636
Cdd:TIGR02168 369 ELESRLEELEE------QLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLeEAELKELQAEL 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 637 SSHDADITRLENEKTQMEEALEKADQEkdqaIREASESVRVMKREMTEAS--ITSDRQIQSLKEKVDSLTRELESSRRRM 714
Cdd:TIGR02168 443 EELEEELEELQEELERLEEALEELREE----LEEAEQALDAAERELAQLQarLDSLERLQENLEGFSEGVKALLKNQSGL 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 715 EQLQEDQTKFLGSHDETKAEM------------MKDLHEAQDEIEKLTN--------------QAGQLKSKNETLTTELE 768
Cdd:TIGR02168 519 SGILGVLSELISVDEGYEAAIeaalggrlqavvVENLNAAKKAIAFLKQnelgrvtflpldsiKGTEIQGNDREILKNIE 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 769 DSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRLQAA---------------QILSGNVESKFSDMQKESKIEMERI 833
Cdd:TIGR02168 599 GFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAkklrpgyrivtldgdLVRPGGVITGGSAKTNSSILERRRE 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 834 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSN----LLVLNQKIEKSEKEKERLEEQIRS 909
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISAlrkdLARLEAEVEQLEERIAQLSKELTE 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 910 HTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTT 989
Cdd:TIGR02168 759 LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATER 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 990 ENARLAGEL------LKSHSAAERSLQMEKEKISKQFEErlktanLEKTRLASELQMAdsrknTLEKQVDELQSQVETAE 1063
Cdd:TIGR02168 839 RLEDLEEQIeelsedIESLAAEIEELEELIEELESELEA------LLNERASLEEALA-----LLRSELEELSEELRELE 907
|
730 740
....*....|....*....|....*...
gi 1254044744 1064 RNRRRDLHQLDMVREELHQVKNDNEKLK 1091
Cdd:TIGR02168 908 SKRSELRRELEELREKLAQLELRLEGLE 935
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
255-1064 |
2.16e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.63 E-value: 2.16e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 255 LKLKVEDLQKQVSSfMSQMQDKNSEIQKMKDAISVNDvsrqnMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALST 334
Cdd:TIGR02168 198 LERQLKSLERQAEK-AERYKELKAELRELELALLVLR-----LEELREELEELQEELKEAEEELEELTAELQELEEKLEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 335 SESTLSMLKDKLAQFEQNALDLKNENAQMKtstresilfesGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLL 414
Cdd:TIGR02168 272 LRLEVSELEEEIEELQKELYALANEISRLE-----------QQKQILRERLANLERQLEELEAQLEELESKLDELAEELA 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 415 AAESRAQQAEEDVRDMKERIITSKKD----DDSNNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAK 490
Cdd:TIGR02168 341 ELEEKLEELKEELESLEAELEELEAEleelESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQ 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 491 RQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEikklksqvqLQQQLEQDLELQKKRVQELTEQRKVLESKAsvaDEFG 570
Cdd:TIGR02168 421 QEIEELLKKLEEAELKELQAELEELEEELEELQE---------ELERLEEALEELREELEEAEQALDAAEREL---AQLQ 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 571 TLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAIT---EWKNRAEKAEEyiEKENHRVQNASSSHDADITRLE 647
Cdd:TIGR02168 489 ARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvdeGYEAAIEAALG--GRLQAVVVENLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 648 NEKTQMEEALE------KADQEKDQAIREASESVRVMKREMTEASITSDRQIQSL------KEKVDSLTRELESSRRRME 715
Cdd:TIGR02168 567 QNELGRVTFLPldsikgTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLlggvlvVDDLDNALELAKKLRPGYR 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 716 QLQEDQTKF------LGSHDETKAEMMkdlhEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYE 789
Cdd:TIGR02168 647 IVTLDGDLVrpggviTGGSAKTNSSIL----ERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 790 ETKVQLREAEDLADRLQAAQilsGNVESKFSDMQKESKiEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNEL 869
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEV---EQLEERIAQLSKELT-ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEEL 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 870 AQLQDQLREEKEQSSNL-----------LVLNQKIEKSEKEKERLEEQIR-------SHTSQNSDTSKTISDLEDKISEL 931
Cdd:TIGR02168 799 KALREALDELRAELTLLneeaanlrerlESLERRIAATERRLEDLEEQIEelsedieSLAAEIEELEELIEELESELEAL 878
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 932 LKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGELLKSHSAAER---S 1008
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEeaeA 958
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254044744 1009 LQMEKEKISKQFEERLKTANLEKTRLA-------SELQMADSRKNTLEKQVDELQSQVETAER 1064
Cdd:TIGR02168 959 LENKIEDDEEEARRRLKRLENKIKELGpvnlaaiEEYEELKERYDFLTAQKEDLTEAKETLEE 1021
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
377-882 |
3.74e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.74 E-value: 3.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 377 RIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNL---------- 446
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEErrreleerle 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 447 -LQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEI 525
Cdd:COG1196 320 eLEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 526 KKLKSQVQLQQQLEQDLELQKKRVQELTEQ-RKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEV 604
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEAlAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAAL 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 605 YQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTE 684
Cdd:COG1196 480 AELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVA 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 685 AsitsdRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETkaemmkDLHEAQDEIEKLTNQAGQLKSKNETLT 764
Cdd:COG1196 560 A-----AAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAV------DLVASDLREADARYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 765 TELEDSQNLcERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERILDNHNKELEKL 844
Cdd:COG1196 629 AARLEAALR-RAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEER 707
|
490 500 510
....*....|....*....|....*....|....*...
gi 1254044744 845 REELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQ 882
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEE 745
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
133-662 |
9.66e-12 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.68 E-value: 9.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 133 REQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELE----------------AEKIASNAEAARLKSELQKA 196
Cdd:PRK02224 180 RVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIEryeeqreqaretrdeaDEVLEEHEERREELETLEAE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 197 KNEIQDSIKDGDSEKDAMEQEIENLQRQL-NIKTASLQSLMLAKSDSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQD 275
Cdd:PRK02224 260 IEDLRETIAETEREREELAEEVRDLRERLeELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQA 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 276 KNSEIQKMKDAI----SVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQ 351
Cdd:PRK02224 340 HNEEAESLREDAddleERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELRE 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 352 NALDLKNENAQMKTSTRE--------SILFESGRIKELQQALSDEKDNNAILNvqlrekdgkiDRIQVDLLAAEsrAQQA 423
Cdd:PRK02224 420 ERDELREREAELEATLRTarerveeaEALLEAGKCPECGQPVEGSPHVETIEE----------DRERVEELEAE--LEDL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 424 EEDVRDMKERIITSKKDDDsnnlLQDELRRTEEKYQQAQKKIENLDETIKQQETQIrdlgRSLDEAKRQLQkmSEQRQNE 503
Cdd:PRK02224 488 EEEVEEVEERLERAEDLVE----AEDRIERLEERREDLEELIAERRETIEEKRERA----EELRERAAELE--AEAEEKR 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 504 EVARQGEDSArsmeeKATKEEIKKLKSqvqlqqqleqDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREEN 583
Cdd:PRK02224 558 EAAAEAEEEA-----EEAREEVAELNS----------KLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELN 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 584 RQYEEETRSLQTNIRTLQDEVyqHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHD---ADITRLENEKTQMEEALEKA 660
Cdd:PRK02224 623 DERRERLAEKRERKRELEAEF--DEARIEEAREDKERAEEYLEQVEEKLDELREERDdlqAEIGAVENELEELEELRERR 700
|
..
gi 1254044744 661 DQ 662
Cdd:PRK02224 701 EA 702
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
349-1060 |
2.10e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 68.63 E-value: 2.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 349 FEQNALDLKNENAQMKTSTRESILFESGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRaqQAEEDvr 428
Cdd:PTZ00121 1076 YKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEAR--KAEDA-- 1151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 429 dmkERIITSKKDDDSNNLlqDELRRTEE--KYQQAQKKIE--NLDETIKQQETQIRDLGRSLDEAKR--QLQKMSEQRQN 502
Cdd:PTZ00121 1152 ---KRVEIARKAEDARKA--EEARKAEDakKAEAARKAEEvrKAEELRKAEDARKAEAARKAEEERKaeEARKAEDAKKA 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 503 EEV-----ARQGEDSARSMEEKATKEEIKKLKSQVQL--QQQLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSS 575
Cdd:PTZ00121 1227 EAVkkaeeAKKDAEEAKKAEEERNNEEIRKFEEARMAhfARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADE 1306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 576 LNSLREENRQYEEetrsLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEE 655
Cdd:PTZ00121 1307 AKKKAEEAKKADE----AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADA 1382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 656 ALEKADQEK--DQAIREASESVR----VMKREMTEASITSDRQIQSLKEKVDSLTRELESSRR------RMEQLQEDQTK 723
Cdd:PTZ00121 1383 AKKKAEEKKkaDEAKKKAEEDKKkadeLKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKadeakkKAEEAKKAEEA 1462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 724 FLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQ-YEKAD--KKYEETKV--QLREA 798
Cdd:PTZ00121 1463 KKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEeAKKADeaKKAEEAKKadEAKKA 1542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 799 EDL--ADRLQAAQILSGNVESKFSDMQK---ESKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQ 873
Cdd:PTZ00121 1543 EEKkkADELKKAEELKKAEEKKKAEEAKkaeEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKA 1622
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 874 DQLREEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDS-- 951
Cdd:PTZ00121 1623 EELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEak 1702
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 952 KDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGELLKSHSAAERSLQMEKEKISKQFEERLKTANLEK 1031
Cdd:PTZ00121 1703 KAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE 1782
|
730 740
....*....|....*....|....*....
gi 1254044744 1032 TRLASElqmADSRKNTLEKQVDELQSQVE 1060
Cdd:PTZ00121 1783 EELDEE---DEKRRMEVDKKIKDIFDNFA 1808
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
150-941 |
5.44e-11 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 67.47 E-value: 5.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 150 AKLADSGDQDEINRLKSDVNSLKRELEAEKiASNAEAARLKSELQKAKN--EIQDSIKDGDSEKDAMEQEIENLQRQLNI 227
Cdd:PTZ00121 1145 ARKAEDAKRVEIARKAEDARKAEEARKAED-AKKAEAARKAEEVRKAEElrKAEDARKAEAARKAEEERKAEEARKAEDA 1223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 228 KTA-SLQSLMLAKSDSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSE 306
Cdd:PTZ00121 1224 KKAeAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKK 1303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 307 MDRTLR--EEQQQKSQLRSQTETLKNALSTSESTLSMLK--DKLAQFEQNALDLKNENAQMKTSTRESILFESGRIKELQ 382
Cdd:PTZ00121 1304 ADEAKKkaEEAKKADEAKKKAEEAKKKADAAKKKAEEAKkaAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAA 1383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 383 QALSDEKDNNAILNVQLREKDGKIDRIQvDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNllQDELRRTEEKYQQAQ 462
Cdd:PTZ00121 1384 KKKAEEKKKADEAKKKAEEDKKKADELK-KAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK--ADEAKKKAEEAKKAE 1460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 463 KKIENLDETIKQQETQIR-DLGRSLDEAKR----------QLQKMSEQRQNEEVARQGEDsARSMEEKATKEEIKKLKSQ 531
Cdd:PTZ00121 1461 EAKKKAEEAKKADEAKKKaEEAKKADEAKKkaeeakkkadEAKKAAEAKKKADEAKKAEE-AKKADEAKKAEEAKKADEA 1539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 532 VQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAi 611
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA- 1618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 612 tewknrAEKAEEYIEKENHRvqnassshdadiTRLENEKTQMEEALEKADQekdqaIREASESVRVMKREMTeasitsdR 691
Cdd:PTZ00121 1619 ------KIKAEELKKAEEEK------------KKVEQLKKKEAEEKKKAEE-----LKKAEEENKIKAAEEA-------K 1668
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 692 QIQSLKEKVDSLTRELESSRRRMEQLQEDQtkflgshdetkaemmkdlhEAQDEIEKLTNQAGQLKSKNETLTTELEDSQ 771
Cdd:PTZ00121 1669 KAEEDKKKAEEAKKAEEDEKKAAEALKKEA-------------------EEAKKAEELKKKEAEEKKKAEELKKAEEENK 1729
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 772 NLCERLKAQYEKADKKYEETKVQLREAEDLADrlqaaqiLSGNVESKFSDMQKESKIEMERILDnhnKELEKLREELKKS 851
Cdd:PTZ00121 1730 IKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAH-------LKKEEEKKAEEIRKEKEAVIEEELD---EEDEKRRMEVDKK 1799
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 852 HTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSHTS-----QNSDTSKTISDLED 926
Cdd:PTZ00121 1800 IKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENgedgnKEADFNKEKDLKED 1879
|
810
....*....|....*
gi 1254044744 927 KISELLKTNDLLALD 941
Cdd:PTZ00121 1880 DEEEIEEADEIEKID 1894
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
76-882 |
6.29e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.02 E-value: 6.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 76 ELANAKKQIKERVNDVEQLKKQVSKLTTERT------MWLSKQQPHDVNALLAEKQELRKQLDREQNEKQELFMQINSMI 149
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREkaeryqALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLT 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 150 AKLADSGDqdEINRLKSDVNSLKRELEAEkiaSNAEAARLKSELQKAKNEIQdSIKDGDSEKdamEQEIENLQRQLNIKT 229
Cdd:TIGR02169 258 EEISELEK--RLEEIEQLLEELNKKIKDL---GEEEQLRVKEKIGELEAEIA-SLERSIAEK---ERELEDAEERLAKLE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 230 ASLQSLMlaksdsSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAisvNDVSRQNMDSLSEKLSEMDR 309
Cdd:TIGR02169 329 AEIDKLL------AEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKE---FAETRDELKDYREKLEKLKR 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 310 TLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLknenaqmktstRESILFESGRIKELQQALSDEK 389
Cdd:TIGR02169 400 EINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDK-----------ALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 390 DNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQA-------- 461
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAievaagnr 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 462 ------------QKKIENLDETIKQQET-----QIRDLGRSLDEAKRQ------LQKMSEQRQNEEVARQGEDSA---RS 515
Cdd:TIGR02169 549 lnnvvveddavaKEAIELLKRRKAGRATflplnKMRDERRDLSILSEDgvigfaVDLVEFDPKYEPAFKYVFGDTlvvED 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 516 MEE-KATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQ 594
Cdd:TIGR02169 629 IEAaRRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELS 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 595 TNIRTLQDEvyqhqdaITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEaLEKADQEKDQAIREASES 674
Cdd:TIGR02169 709 QELSDASRK-------IGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE-LEARIEELEEDLHKLEEA 780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 675 VRVMKREMTEASItsdRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAG 754
Cdd:TIGR02169 781 LNDLEARLSHSRI---PEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE 857
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 755 QLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAED---------------LADRLQAAQILSGNVeSKF 819
Cdd:TIGR02169 858 NLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERkieeleaqiekkrkrLSELKAKLEALEEEL-SEI 936
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254044744 820 SDMQKESKIEMERILDnhnkeLEKLREELKKSHTEHTSLESV----------LEEQQNELAQLQDQLREEKEQ 882
Cdd:TIGR02169 937 EDPKGEDEEIPEEELS-----LEDVQAELQRVEEEIRALEPVnmlaiqeyeeVLKRLDELKEKRAKLEEERKA 1004
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
70-627 |
1.23e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 1.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 70 DKAIKIELANAKKQIKERVNDVEQLKKQVSKLTTERTmwlskQQPHDVNALLAEKQELRKQLDREQNEKQELFMQINSMI 149
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELE-----ELRLELEELELELEEAQAEEYELLAELARLEQDIARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 150 AKLADSgdQDEINRLKSDVNSLKRE---LEAEKIASNAEAARLKSELQKAKNEIQDSIKdgdSEKDAMEQEIENLQRQLN 226
Cdd:COG1196 309 ERRREL--EERLEELEEELAELEEEleeLEEELEELEEELEEAEEELEEAEAELAEAEE---ALLEAEAELAEAEEELEE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 227 IKTASLQSLMLAKSDSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSE 306
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 307 MDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRESILFESGRIKELQQALS 386
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 387 DEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQAQKKIE 466
Cdd:COG1196 544 LAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLL 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 467 NLDETIKQQETQIRDLGRSLDEAKRQLQKMseqrqnEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQK 546
Cdd:COG1196 624 GRTLVAARLEAALRRAVTLAGRLREVTLEG------EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 547 KRVQELTEQRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIE 626
Cdd:COG1196 698 ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
.
gi 1254044744 627 K 627
Cdd:COG1196 778 A 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
643-1070 |
1.43e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 1.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 643 ITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEAsitsDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQt 722
Cdd:COG1196 202 LEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEEL----EAELEELEAELEELEAELAELEAELEELRLEL- 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 723 kflgshdetkAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLA 802
Cdd:COG1196 277 ----------EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEEL 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 803 DRLQAAQILSGNVESKFSDMQKESKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQ 882
Cdd:COG1196 347 EEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 883 SSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSkdqqLKEAEDE 962
Cdd:COG1196 427 EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL----LLEAEAD 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 963 KNLMLEEVQALQNAT--PSDSAEIAELTTENARLAGELLKSHSAAERSLQMEKEKISKQFEERLKTANLEK-TRLASELQ 1039
Cdd:COG1196 503 YEGFLEGVKAALLLAglRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRaTFLPLDKI 582
|
410 420 430
....*....|....*....|....*....|.
gi 1254044744 1040 MADSRKNTLEKQVDELQSQVETAERNRRRDL 1070
Cdd:COG1196 583 RARAALAAALARGAIGAAVDLVASDLREADA 613
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
486-1090 |
1.83e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.34 E-value: 1.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 486 LDEAKRQLQKMSEQRqneEVARQgedsARSMEEKatkEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASV 565
Cdd:COG1196 195 LGELERQLEPLERQA---EKAER----YRELKEE---LKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 566 ADEfgtlmsSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADITR 645
Cdd:COG1196 265 LEA------ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 646 LENEKTQMEEALEKADQEKDQAIREASEsvrvmKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFL 725
Cdd:COG1196 339 LEELEEELEEAEEELEEAEAELAEAEEA-----LLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALL 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 726 GSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRL 805
Cdd:COG1196 414 ERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARL 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 806 QAAQILSGNVESKFSDMQKESKIEMERILDNHNKELEKLREELKK--SHTEHTSLESVLEEQQNELAQLQDQLREEKEQS 883
Cdd:COG1196 494 LLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAalEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGR 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 884 SNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEK 963
Cdd:COG1196 574 ATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEG 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 964 NLMLEEVQALQNATPSDSAEIAELTTENARLAGELLKSHSAAERSLQMEKEKISKQFEERLKTANLEKTRLASELQMADS 1043
Cdd:COG1196 654 EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1254044744 1044 RKNTLEKQVDELQSQVETAERNRRRDLhQLDMVREELHQVKNDNEKL 1090
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPP-DLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
445-995 |
8.51e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 8.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 445 NLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEE 524
Cdd:COG1196 228 ELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 525 IKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEfgTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEV 604
Cdd:COG1196 308 EERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE--ELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 605 YQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRvmKREMTE 684
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEE--EEALLE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 685 ASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAemmKDLHEAQDEIEKLTNQAGQLKSKNETLT 764
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKA---ALLLAGLRGLAGAVAVLIGVEAAYEAAL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 765 TELEDSQnlcerlkAQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERILDNHNKELEKL 844
Cdd:COG1196 541 EAALAAA-------LQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 845 REELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKE------QSSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTS 918
Cdd:COG1196 614 RYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTlegeggSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEEL 693
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1254044744 919 KTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLA 995
Cdd:COG1196 694 ELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
456-1092 |
1.12e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 1.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 456 EKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQ 535
Cdd:TIGR02168 172 ERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEA 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 536 QQLEQDLELQKKRVQELTEQRKVLesKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWK 615
Cdd:TIGR02168 252 EEELEELTAELQELEEKLEELRLE--VSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 616 NRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEaLEKADQEKDQAIREASESVRVMKREMTEASIT---SDRQ 692
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLETLRSKVAQLELQIASLNNEierLEAR 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 693 IQSLKEKVDSLTRELESSRRRMEQLQ-EDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQ 771
Cdd:TIGR02168 409 LERLEDRRERLQQEIEELLKKLEEAElKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQ 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 772 NLCERLKAQYEKADKKYEETKVQLREAEDLADRLQ-----------------------AAQILSGNVESKFSDMQKESKI 828
Cdd:TIGR02168 489 ARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGvlselisvdegyeaaieaalggrLQAVVVENLNAAKKAIAFLKQN 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 829 EMERIL-----DNHNKELEKLREELKKSHTEHTSLESVLEEQQNE-----------------LAQLQDQLREEKEQSSNL 886
Cdd:TIGR02168 569 ELGRVTflpldSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKlrkalsyllggvlvvddLDNALELAKKLRPGYRIV 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 887 L----------VLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQL 956
Cdd:TIGR02168 649 TldgdlvrpggVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQI 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 957 KEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGELLKSHSAAER------SLQMEKEKISKQF---EERLKTA 1027
Cdd:TIGR02168 729 SALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEaeaeieELEAQIEQLKEELkalREALDEL 808
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1254044744 1028 NLEKTRLASELQMADSRKNTLEKQVDELQSQVETAERNRRRDLHQLDMVREELHQVKNDNEKLKS 1092
Cdd:TIGR02168 809 RAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELES 873
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
464-800 |
1.70e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.39 E-value: 1.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 464 KIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRqneEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLE 543
Cdd:TIGR02169 171 KKEKALEELEEVEENIERLDLIIDEKRQQLERLRRER---EKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 544 LQKKRVQELTEQRKVLEskasvaDEFGTLMSSLNSLREE-NRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAE 622
Cdd:TIGR02169 248 SLEEELEKLTEEISELE------KRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 623 EYIEK---ENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASEsvrvmkrEMTEASITSDRQIQsLKEK 699
Cdd:TIGR02169 322 ERLAKleaEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEE-------VDKEFAETRDELKD-YREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 700 VDSLTRELESSRRRMEQLQEDQTKF----------LGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELED 769
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLseeladlnaaIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYD 473
|
330 340 350
....*....|....*....|....*....|.
gi 1254044744 770 SQNLCERLKAQYEKADKKYEETKVQLREAED 800
Cdd:TIGR02169 474 LKEEYDRVEKELSKLQRELAEAEAQARASEE 504
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
71-315 |
4.95e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.85 E-value: 4.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 71 KAIKIELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKQQPHDVN--ALLAEKQELRKQLDREQNEKQELFMQINSM 148
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEieNVKSELKELEARIEELEEDLHKLEEALNDL 784
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 149 IAKLADSGDQdEINRLKSDVNSLKRELEAEKIASNAEAARLKSE---LQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQL 225
Cdd:TIGR02169 785 EARLSHSRIP-EIQAELSKLEEEVSRIEARLREIEQKLNRLTLEkeyLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKK 863
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 226 NIKTASLQSLMLAKSDssktdkLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNmdsLSEKLS 305
Cdd:TIGR02169 864 EELEEELEELEAALRD------LESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEA---LEEELS 934
|
250
....*....|
gi 1254044744 306 EMDRTLREEQ 315
Cdd:TIGR02169 935 EIEDPKGEDE 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
86-682 |
2.84e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.41 E-value: 2.84e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 86 ERVNDV-EQLKKQVSKLTTER------TMWLSKQQPHDVNALLAEKQELRKQLDREQNEKQELFMQINSMIAKLAD---- 154
Cdd:COG1196 189 ERLEDIlGELERQLEPLERQAekaeryRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAEleae 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 155 --------SGDQDEINRLKSDVNSLKRE---LEAEKIASNAEAARLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQR 223
Cdd:COG1196 269 leelrlelEELELELEEAQAEEYELLAElarLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 224 QLNIKTASLQSLmlaksdSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEK 303
Cdd:COG1196 349 AEEELEEAEAEL------AEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 304 LSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAQmktsTRESILFESGRIKELQQ 383
Cdd:COG1196 423 LEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE----LLEELAEAAARLLLLLE 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 384 AL-SDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDmkeriitskkdddsnNLLQDELRRTEEkyqQAQ 462
Cdd:COG1196 499 AEaDYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALA---------------AALQNIVVEDDE---VAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 463 KKIENLDETIKQQETQIrdlgRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDL 542
Cdd:COG1196 561 AAIEYLKAAKAGRATFL----PLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAAL 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 543 ELQKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAE 622
Cdd:COG1196 637 RRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEER 716
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 623 EYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREM 682
Cdd:COG1196 717 LEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
554-931 |
3.65e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 3.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 554 EQRKVLESKASVADEFGTLMSSLNSLREENRQYEEetrslqtnIRTLQDEVYQHQDAITEWKNRAEK----AEEYIEKEN 629
Cdd:TIGR02169 154 ERRKIIDEIAGVAEFDRKKEKALEELEEVEENIER--------LDLIIDEKRQQLERLRREREKAERyqalLKEKREYEG 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 630 HRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSLKEKVDSLTRELES 709
Cdd:TIGR02169 226 YELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIAS 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 710 SRRRMEQLQEDQTKFlgshDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYE 789
Cdd:TIGR02169 306 LERSIAEKERELEDA----EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFA 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 790 ETKVQLREAEDladRLQAAQILSGNVESKFSDMQKESKIEMERILDnHNKELEKLREELKKSHTEHTSLESVLEEQQNEL 869
Cdd:TIGR02169 382 ETRDELKDYRE---KLEKLKREINELKRELDRLQEELQRLSEELAD-LNAAIAGIEAKINELEEEKEDKALEIKKQEWKL 457
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1254044744 870 AQLQDQLREEKEQSSNLlvlnqkieksekekerleeqirshtsqnsdtSKTISDLEDKISEL 931
Cdd:TIGR02169 458 EQLAADLSKYEQELYDL-------------------------------KEEYDRVEKELSKL 488
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
158-888 |
1.04e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 56.67 E-value: 1.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 158 QDEINRLKSDVNSLKRELEAEKIASNAEAARLKSELQKAKNEIQDSIKDGDSEKDAM-------EQEIENLQRQLNIKTA 230
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMadirrreSQSQEDLRNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 231 SLQSLMLAKSDSSKTDKLS-EENETLKLKVEDLQKQVSSFMSQMQDKNSeiQKMKDAISVNDVSRQNMDS-LSEKLSEMD 308
Cdd:pfam15921 153 ELEAAKCLKEDMLEDSNTQiEQLRKMMLSHEGVLQEIRSILVDFEEASG--KKIYEHDSMSTMHFRSLGSaISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 309 RTLREEQQQKSQLRSQTETLKN-ALSTSESTLSMLKDKLAQF------EQNALDLKNENAQMKTSTRES---ILFESGRI 378
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEALKSeSQNKIELLLQQHQDRIEQLisehevEITGLTEKASSARSQANSIQSqleIIQEQARN 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 379 KE--LQQALSDEKDNNAILNVQLREK----DGKIDRIQVDLLAAESRAQQAEEDVRDMKERiiTSKKDDDSNNLLQDELR 452
Cdd:pfam15921 311 QNsmYMRQLSDLESTVSQLRSELREAkrmyEDKIEELEKQLVLANSELTEARTERDQFSQE--SGNLDDQLQKLLADLHK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 453 RTEEKYQQAQKKIENLDETIKQQETqIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQV 532
Cdd:pfam15921 389 REKELSLEKEQNKRLWDRDTGNSIT-IDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLT 467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 533 QLQQQLEQDLelqKKRVQELTEQRKVLESKASVadefgtlMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQdait 612
Cdd:pfam15921 468 AQLESTKEML---RKVVEELTAKKMTLESSERT-------VSDLTASLQEKERAIEATNAEITKLRSRVDLKLQEL---- 533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 613 ewknraekaeEYIEKENHRVQNASSSHDADITRLEnEKTQMEEALEKADQEKDQAIREASESVRVMKREMT--EASITSD 690
Cdd:pfam15921 534 ----------QHLKNEGDHLRNVQTECEALKLQMA-EKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAqlEKEINDR 602
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 691 R----QIQSLKEKVDSLTRELESsrrRMEQLQEDQTKFLGSHDE----------TKAEMMKDLHEAQDEIEKLTNQAGQL 756
Cdd:pfam15921 603 RlelqEFKILKDKKDAKIRELEA---RVSDLELEKVKLVNAGSErlravkdikqERDQLLNEVKTSRNELNSLSEDYEVL 679
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 757 KSKNETLTTELEDSQNlceRLKAQYEKADKKYEETKVQLREAEDL-ADRLQAAQILSGNVESKFSDMQK-ESKIE-MERI 833
Cdd:pfam15921 680 KRNFRNKSEEMETTTN---KLKMQLKSAQSELEQTRNTLKSMEGSdGHAMKVAMGMQKQITAKRGQIDAlQSKIQfLEEA 756
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1254044744 834 LDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLV 888
Cdd:pfam15921 757 MTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEV 811
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
577-1092 |
1.76e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.43 E-value: 1.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 577 NSLREENRQYEE-ETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDAdITRLENEKTQMEE 655
Cdd:PRK02224 187 GSLDQLKAQIEEkEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREE-LETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 656 ALEKADQEKD------QAIREASESVRVMKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFlGSHD 729
Cdd:PRK02224 266 TIAETEREREelaeevRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAH-NEEA 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 730 ETKAEMMKDLHEaqdEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQ 809
Cdd:PRK02224 345 ESLREDADDLEE---RAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 810 ilsGNVESKFSDMQKESKIEMERIldnhnKELEKLREELK----KSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSN 885
Cdd:PRK02224 422 ---DELREREAELEATLRTARERV-----EEAEALLEAGKcpecGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEE 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 886 LlvlnQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNL 965
Cdd:PRK02224 494 V----EERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEE 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 966 MLEEVQAL-----QNATPSDS----AEIAELTTENARLAGELLKSHSAAERSLQMEKEKISKQFE-----------ERLK 1025
Cdd:PRK02224 570 AREEVAELnsklaELKERIESleriRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRErkreleaefdeARIE 649
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1254044744 1026 TANLEKTRLASELQMADSRKNTLEKQVDELQSQVETAErnrrRDLHQLDMVREELHQVKNDNEKLKS 1092
Cdd:PRK02224 650 EAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVE----NELEELEELRERREALENRVEALEA 712
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
728-1072 |
2.17e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 2.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 728 HDETKAEMMKDLHEAQDEIEKLtnqagqlksknETLTTELEdsQNLcERLKAQYEKAdKKYEETKVQLREAEDladRLQA 807
Cdd:COG1196 170 YKERKEEAERKLEATEENLERL-----------EDILGELE--RQL-EPLERQAEKA-ERYRELKEELKELEA---ELLL 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 808 AQILsgnveskfsdmqkeskiEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQssnLL 887
Cdd:COG1196 232 LKLR-----------------ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAE---EY 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 888 VLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLML 967
Cdd:COG1196 292 ELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 968 EEVQALQNATPSDSAEIAELTTENARLAGELLKSHSAAERSLQMEKEKISKQFEERLKTANLEKTRLASELQMADSRKNT 1047
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE 451
|
330 340
....*....|....*....|....*
gi 1254044744 1048 LEKQVDELQSQVETAERNRRRDLHQ 1072
Cdd:COG1196 452 AELEEEEEALLELLAELLEEAALLE 476
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
256-871 |
2.84e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.05 E-value: 2.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 256 KLKVEDLQKQVSSFMSQMQdknSEIQKMKDAisvNDVSRQNmdSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTS 335
Cdd:PRK02224 175 RLGVERVLSDQRGSLDQLK---AQIEEKEEK---DLHERLN--GLESELAELDEEIERYEEQREQARETRDEADEVLEEH 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 336 ESTLsmlkDKLAQFEQNALDLKNENAQMKTsTRESIlfeSGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLA 415
Cdd:PRK02224 247 EERR----EELETLEAEIEDLRETIAETER-EREEL---AEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 416 AESRAQQAEEDVRDMKERIITSKKDDDSnnlLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQK 495
Cdd:PRK02224 319 LEDRDEELRDRLEECRVAAQAHNEEAES---LREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 496 MSEQRQNEEVARQGEDSARSMEEkatkEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEfgTLMSS 575
Cdd:PRK02224 396 LRERFGDAPVDLGNAEDFLEELR----EERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGS--PHVET 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 576 LNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAItEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEE 655
Cdd:PRK02224 470 IEEDRERVEELEAELEDLEEEVEEVEERLERAEDLV-EAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAE 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 656 ALEKADQEKDQA--IREASESVRVMKREMTEASITSDRQIQSLkEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKa 733
Cdd:PRK02224 549 LEAEAEEKREAAaeAEEEAEEAREEVAELNSKLAELKERIESL-ERIRTLLAAIADAEDEIERLREKREALAELNDERR- 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 734 EMMKDLHEAQDEIEKltnqagqlksknetlttELEDSQnlCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAqilSG 813
Cdd:PRK02224 627 ERLAEKRERKRELEA-----------------EFDEAR--IEEAREDKERAEEYLEQVEEKLDELREERDDLQAE---IG 684
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 1254044744 814 NVESKFSdmqkeskiEMERILDNHnKELEKLREELKKSHTEHTSLESVLEEQQNELAQ 871
Cdd:PRK02224 685 AVENELE--------ELEELRERR-EALENRVEALEALYDEAEELESMYGDLRAELRQ 733
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
379-1070 |
3.17e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.07 E-value: 3.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 379 KELQQALSDEKDNNA--ILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELrrTEE 456
Cdd:TIGR02169 210 AERYQALLKEKREYEgyELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL--GEE 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 457 KYQQAQKKIENLdetikqqETQIRDLGRSLDEAKRQLQKMSEQRQNEEVarqgedsarsmEEKATKEEIKKLKsqvQLQQ 536
Cdd:TIGR02169 288 EQLRVKEKIGEL-------EAEIASLERSIAEKERELEDAEERLAKLEA-----------EIDKLLAEIEELE---REIE 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 537 QLEQDLELQKKRVQELTEQRKVLESKA-SVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQH-------- 607
Cdd:TIGR02169 347 EERKRRDKLTEEYAELKEELEDLRAELeEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLseeladln 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 608 ------QDAITEWKNRAEKAEEYIEKENHRVQNASSSHD----------ADITRLENEKTQMEEALEKADQEKDQAIREA 671
Cdd:TIGR02169 427 aaiagiEAKINELEEEKEDKALEIKKQEWKLEQLAADLSkyeqelydlkEEYDRVEKELSKLQRELAEAEAQARASEERV 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 672 SESVRVmkREMTEASI--------------------------------------TSDRQIQSLKEKVDSLTRELESSRRR 713
Cdd:TIGR02169 507 RGGRAV--EEVLKASIqgvhgtvaqlgsvgeryataievaagnrlnnvvveddaVAKEAIELLKRRKAGRATFLPLNKMR 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 714 MEQLQEDQTKFLGSHD--------ETKAE-----------MMKDLHEAQDEIEK--LTNQAGQLKSKNETLTTELEDSQN 772
Cdd:TIGR02169 585 DERRDLSILSEDGVIGfavdlvefDPKYEpafkyvfgdtlVVEDIEAARRLMGKyrMVTLEGELFEKSGAMTGGSRAPRG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 773 LCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKiEMERILDNHNKELEKLREELKKSH 852
Cdd:TIGR02169 665 GILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIG-EIEKEIEQLEQEEEKLKERLEELE 743
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 853 TEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLlvlnqKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISEll 932
Cdd:TIGR02169 744 EDLSSLEQEIENVKSELKELEARIEELEEDLHKL-----EEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLRE-- 816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 933 ktndllaldvqkLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGElLKSHSAAERSLQME 1012
Cdd:TIGR02169 817 ------------IEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE-LEELEAALRDLESR 883
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1254044744 1013 KEKISKQFEER---LKTANLEKTRLASELQMADSRKNTLEKQVDELQSQVETAERNRRRDL 1070
Cdd:TIGR02169 884 LGDLKKERDELeaqLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDE 944
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
450-1091 |
6.15e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.91 E-value: 6.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 450 ELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIK--- 526
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESleg 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 527 KLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVyq 606
Cdd:PRK03918 253 SKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERI-- 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 607 hqDAITEWKNRAEKAEEYIEKENHRVQNASSSHDA--DITRLENEKTQMEEalEKADQEKDQAIREAsESVRVMKREMTE 684
Cdd:PRK03918 331 --KELEEKEERLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERLKK--RLTGLTPEKLEKEL-EELEKAKEEIEE 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 685 ASITSDRQIQSLKEKVDSLTR---ELESSRRRMEQLQEDQTkflgshDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNE 761
Cdd:PRK03918 406 EISKITARIGELKKEIKELKKaieELKKAKGKCPVCGRELT------EEHRKELLEEYTAELKRIEKELKEIEEKERKLR 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 762 TLTTELEDSQNLCERLKAQYEKADkkyeetkvQLREAEdladrlqaaqilsgnveskfsdmQKESKIEMERiLDNHNKEL 841
Cdd:PRK03918 480 KELRELEKVLKKESELIKLKELAE--------QLKELE-----------------------EKLKKYNLEE-LEKKAEEY 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 842 EKLREELKKSHTEHTSLESVLEEQQ---NELAQLQDQLREEKEQSSNLlvlnqkieksekekerleeqirsHTSQNSDTS 918
Cdd:PRK03918 528 EKLKEKLIKLKGEIKSLKKELEKLEelkKKLAELEKKLDELEEELAEL-----------------------LKELEELGF 584
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 919 KTISDLEDKISELlktndllaldvqklsKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGEL 998
Cdd:PRK03918 585 ESVEELEERLKEL---------------EPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEL 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 999 lkshsaaerslqmeKEKISKQFEERLKTANLEKTRLASELQMADSRKNTLEKQVDELQSQVEtaerNRRRDLHQLDMVRE 1078
Cdd:PRK03918 650 --------------EELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLE----KLKEELEEREKAKK 711
|
650
....*....|...
gi 1254044744 1079 ELHQVKNDNEKLK 1091
Cdd:PRK03918 712 ELEKLEKALERVE 724
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
250-971 |
6.24e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.90 E-value: 6.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 250 EENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDaisvnDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLk 329
Cdd:TIGR00606 258 EHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKME-----KVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKL- 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 330 nalsTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRESILFESGRIKEL----QQALSDEKDNNAILNVQLREKDGK 405
Cdd:TIGR00606 332 ----NKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELdgfeRGPFSERQIKNFHTLVIERQEDEA 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 406 --IDRIQVDLLAAESRAQQAEEDVRDMKE---RIITSKKDDDSNNllQDELRRTEEKYQQAQ---KKIENLDETIKQQET 477
Cdd:TIGR00606 408 ktAAQLCADLQSKERLKQEQADEIRDEKKglgRTIELKKEILEKK--QEELKFVIKELQQLEgssDRILELDQELRKAER 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 478 QIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEK-ATKEEIKKLKSQVQLQQQLEQDLELQKKR-VQELTEQ 555
Cdd:TIGR00606 486 ELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLnHHTTTRTQMEMLTKDKMDKDEQIRKIKSRhSDELTSL 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 556 RKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNirtlqdevyQHQdaiteWKNRAEKAEEYIEKENHRVQNA 635
Cdd:TIGR00606 566 LGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQN---------KNH-----INNELESKEEQLSSYEDKLFDV 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 636 SSSHDADiTRLENEKTQMEEAlEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSLKEkVDSLTRELESSRRRME 715
Cdd:TIGR00606 632 CGSQDEE-SDLERLKEEIEKS-SKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAE-LQEFISDLQSKLRLAP 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 716 QLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQL 795
Cdd:TIGR00606 709 DKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCL 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 796 REAedlaDRLQAAQILSGNVESKFSDMQKESK-IEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQD 874
Cdd:TIGR00606 789 TDV----TIMERFQMELKDVERKIAQQAAKLQgSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKS 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 875 QLREEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLaldvqklsksLDSKDQ 954
Cdd:TIGR00606 865 KTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEEL----------ISSKET 934
|
730
....*....|....*..
gi 1254044744 955 QLKEAEDEKNLMLEEVQ 971
Cdd:TIGR00606 935 SNKKAQDKVNDIKEKVK 951
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
186-512 |
9.90e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 53.38 E-value: 9.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 186 AARLKSELQKAKneiqdSIKDGDSEKDAMEQEIENLQRQLNiktaslqslmlaksdssKTDKLSEENEtlklkveDLQKQ 265
Cdd:PRK11281 38 EADVQAQLDALN-----KQKLLEAEDKLVQQDLEQTLALLD-----------------KIDRQKEETE-------QLKQQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 266 VSSFMSQMQDKNSEIQKMKDaiSVNDVSRQNMDSLSeklsemdrtLREEQQQKSQLRSQTETLKNALSTSESTLSMLkdk 345
Cdd:PRK11281 89 LAQAPAKLRQAQAELEALKD--DNDEETRETLSTLS---------LRQLESRLAQTLDQLQNAQNDLAEYNSQLVSL--- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 346 laqfeQNALdlknENAQmktstreSILFE-SGRIKELQQALSDEKDNNAILNVQLRekdgkidriqvDLLAAESRAQQAE 424
Cdd:PRK11281 155 -----QTQP----ERAQ-------AALYAnSQRLQQIRNLLKGGKVGGKALRPSQR-----------VLLQAEQALLNAQ 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 425 EDVRdmkeriitsKKDDDSNNLLQDELrrteekyqqaQKKIENLDETIKQQETQIRDLGRSLDEAKRQL--QKMSEQRQN 502
Cdd:PRK11281 208 NDLQ---------RKSLEGNTQLQDLL----------QKQRDYLTARIQRLEHQLQLLQEAINSKRLTLseKTVQEAQSQ 268
|
330
....*....|
gi 1254044744 503 EEVARQGEDS 512
Cdd:PRK11281 269 DEAARIQANP 278
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
840-1094 |
1.44e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 840 ELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQssnllvlnqkieksekeKERLEEQIRSHTSQNSDTSK 919
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE-----------------LEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 920 TISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGELL 999
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 1000 KSHSAAERSLQMEKEKISKQFEERLKTANLEKT--RLASELQMADSRKNTLEKQVDELQSQVETAERNRRRDLHQLDMVR 1077
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAELAAQLEELEEAeeALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELE 455
|
250
....*....|....*..
gi 1254044744 1078 EELHQVKNDNEKLKSST 1094
Cdd:COG1196 456 EEEEALLELLAELLEEA 472
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
368-881 |
1.68e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.37 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 368 RESILFESGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLL 447
Cdd:PRK03918 171 IKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 448 QDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKAT--KEEI 525
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINgiEERI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 526 KKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEF------------GTLMSSLNSLREENRQYEEETRSL 593
Cdd:PRK03918 331 KELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELerlkkrltgltpEKLEKELEELEKAKEEIEEEISKI 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 594 QTNIRTLQDEVYQHQDAITEWKNRAEKAEEY-IEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREAS 672
Cdd:PRK03918 411 TARIGELKKEIKELKKAIEELKKAKGKCPVCgRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLK 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 673 ESVRVMK-REMTEasitsdrQIQSLKEKVDSLTRE-LESSRRRMEQLQEDQTKfLGSHDETKAEMMKDLHEAQDEIEKLT 750
Cdd:PRK03918 491 KESELIKlKELAE-------QLKELEEKLKKYNLEeLEKKAEEYEKLKEKLIK-LKGEIKSLKKELEKLEELKKKLAELE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 751 NQAGQLKSKNETLTTEL-----EDSQNLCERLKaQYEKADKKYEETKVQLREAEDLADRLQAAQ-----------ILSGN 814
Cdd:PRK03918 563 KKLDELEEELAELLKELeelgfESVEELEERLK-ELEPFYNEYLELKDAEKELEREEKELKKLEeeldkafeelaETEKR 641
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1254044744 815 VESKFSDMQKESKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKE 881
Cdd:PRK03918 642 LEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
183-749 |
2.09e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.99 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 183 NAEAARLKSELqKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLmlaKSDSSKTDKLSEENETLKLKVEDL 262
Cdd:PRK03918 175 KRRIERLEKFI-KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKL---EKEVKELEELKEEIEELEKELESL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 263 QKQVSSFMSQMQDKNSEIQKMKDAISVndvsrqnmdsLSEKLSEMDRtLREEQQQKSQLRSQTETLKNALSTSESTLSML 342
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELKKEIEE----------LEEKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIEKRLSRL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 343 KDKLAQFEQNALDLKNENAQMK--TSTRESILFESGRIKELQQALSDEKDNNAIL-NVQLREKDGKIDRIQVDLLAAESR 419
Cdd:PRK03918 320 EEEINGIEERIKELEEKEERLEelKKKLKELEKRLEELEERHELYEEAKAKKEELeRLKKRLTGLTPEKLEKELEELEKA 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 420 AQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRTEEK----------------YQQAQKKIENLDETIKQQETQIRDLG 483
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgrelteehrkelLEEYTAELKRIEKELKEIEEKERKLR 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 484 RSLDEAKRQLQKMSEQRQNEEVARQgedsARSMEEKATKEEIKKLKsqvqlqqQLEQDLELQKKRVQELTEQRKVLESKA 563
Cdd:PRK03918 480 KELRELEKVLKKESELIKLKELAEQ----LKELEEKLKKYNLEELE-------KKAEEYEKLKEKLIKLKGEIKSLKKEL 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 564 SVADEfgtLMSSLNSLREENRQYEEETRSLQTNIRTLQDEvyqhqdAITEWKNRAEKAEEYIEKENhRVQNASSSHDADI 643
Cdd:PRK03918 549 EKLEE---LKKKLAELEKKLDELEEELAELLKELEELGFE------SVEELEERLKELEPFYNEYL-ELKDAEKELEREE 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 644 TRLENEKTQMEEALEKADqEKDQAIREASESVRVMKREMTEasitsdRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTK 723
Cdd:PRK03918 619 KELKKLEEELDKAFEELA-ETEKRLEELRKELEELEKKYSE------EEYEELREEYLELSRELAGLRAELEELEKRREE 691
|
570 580
....*....|....*....|....*.
gi 1254044744 724 FLGSHDETKAEmMKDLHEAQDEIEKL 749
Cdd:PRK03918 692 IKKTLEKLKEE-LEEREKAKKELEKL 716
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
692-886 |
4.55e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 4.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 692 QIQSLKEKVDSLTR---ELESSRRRMEQLQEdqtkfLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQ-----LKSKNETL 763
Cdd:COG4913 226 AADALVEHFDDLERaheALEDAREQIELLEP-----IRELAERYAAARERLAELEYLRAALRLWFAQrrlelLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 764 TTELEDSQNLCERLKAQYEKADKKYEETKVQLREA-----EDLADRLQAAQILSGNVESKFSDMQK----------ESKI 828
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNggdrlEQLEREIERLERELEERERRRARLEAllaalglplpASAE 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1254044744 829 EMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNL 886
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNI 438
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
253-1062 |
5.19e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.89 E-value: 5.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 253 ETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAIsvndvsRQNMDSLSEKLSEMDR-------TLREEQQQKSQLRSQT 325
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYL------RQSVIDLQTKLQEMQMerdamadIRRRESQSQEDLRNQL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 326 ETLKNALSTSESTLS-MLKDKLAQFEQnaldlknenaqmktsTRESILFESGRIKELQQALSDEKDNNAilnVQLREKDG 404
Cdd:pfam15921 148 QNTVHELEAAKCLKEdMLEDSNTQIEQ---------------LRKMMLSHEGVLQEIRSILVDFEEASG---KKIYEHDS 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 405 KIDRIQVDLLAAESRA-QQAEEDVRDMKERIITSkkDDDSNNLLQDELRRTEEKYQQAQKKIENLdetIKQQETQIRDLG 483
Cdd:pfam15921 210 MSTMHFRSLGSAISKIlRELDTEISYLKGRIFPV--EDQLEALKSESQNKIELLLQQHQDRIEQL---ISEHEVEITGLT 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 484 RSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSqvqlqqqleqdlelqkkrvqELTEQRKVLESKA 563
Cdd:pfam15921 285 EKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRS--------------------ELREAKRMYEDKI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 564 SVADEFGTLMSS-LNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITewknraekaeeyIEKENHRvqnassshdad 642
Cdd:pfam15921 345 EELEKQLVLANSeLTEARTERDQFSQESGNLDDQLQKLLADLHKREKELS------------LEKEQNK----------- 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 643 itRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSLK------EKVDSLTRELESSRRRMEQ 716
Cdd:pfam15921 402 --RLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQgkneslEKVSSLTAQLESTKEMLRK 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 717 LQEDQTK---FLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELE----------DSQNLCERLKAQYEK 783
Cdd:pfam15921 480 VVEELTAkkmTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQhlknegdhlrNVQTECEALKLQMAE 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 784 ADKKYEETKVQLREAEDLADR----LQAAQILSGNVESKFSDMQKESKiEMERILDNHNKELEKLREELKKSHTEHTSLE 859
Cdd:pfam15921 560 KDKVIEILRQQIENMTQLVGQhgrtAGAMQVEKAQLEKEINDRRLELQ-EFKILKDKKDAKIRELEARVSDLELEKVKLV 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 860 SVLEEQQ---NELAQLQDQLREEKEQSSNLLvlnqkieksekekerleeqirshTSQNSDTSKTISDLEDKISELLKTND 936
Cdd:pfam15921 639 NAGSERLravKDIKQERDQLLNEVKTSRNEL-----------------------NSLSEDYEVLKRNFRNKSEEMETTTN 695
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 937 LLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAgELLKSHSAAERSLQMEKEKI 1016
Cdd:pfam15921 696 KLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLE-EAMTNANKEKHFLKEEKNKL 774
|
810 820 830 840
....*....|....*....|....*....|....*....|....*.
gi 1254044744 1017 SKQfeerLKTANLEKTRLASELQMADSRKNTLEKQVDELQSQVETA 1062
Cdd:pfam15921 775 SQE----LSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKA 816
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
113-797 |
5.19e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.79 E-value: 5.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 113 QPHDVNALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADSgdQDEINRLKSDVNSLKRELEAEKIASNaeaarlksE 192
Cdd:TIGR04523 31 QDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNS--NNKIKILEQQIKDLNDKLKKNKDKIN--------K 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 193 LQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLN-IKTASLQSLMLAKSDSSKTDKLSEENETLKLKVEDLQKQVSSFMS 271
Cdd:TIGR04523 101 LNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKeNKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEK 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 272 QMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQ 351
Cdd:TIGR04523 181 EKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 352 NALDLKN---ENAQMKTSTRESILFESGRIKELQQALSD-----EKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQA 423
Cdd:TIGR04523 261 EQNKIKKqlsEKQKELEQNNKKIKELEKQLNQLKSEISDlnnqkEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 424 EEDVRDMKERIITSKKDddsNNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNE 503
Cdd:TIGR04523 341 NEQISQLKKELTNSESE---NSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKL 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 504 EvarqgedsarsMEEKATKEEIKKLKSQVQLQqqleqdlelqKKRVQELTEQRKVLEskasvadefgTLMSSLNSLREEN 583
Cdd:TIGR04523 418 Q-----------QEKELLEKEIERLKETIIKN----------NSEIKDLTNQDSVKE----------LIIKNLDNTRESL 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 584 RQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQE 663
Cdd:TIGR04523 467 ETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDE 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 664 KDqaireaSESVRVMKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQ---TKFLGSHDETKAEMMKDLH 740
Cdd:TIGR04523 547 LN------KDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKkdlIKEIEEKEKKISSLEKELE 620
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 1254044744 741 EAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLRE 797
Cdd:TIGR04523 621 KAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDD 677
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
692-886 |
1.02e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 692 QIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMM---KDLHEAQDEIEKLTNQAGQLKSKNETLTTELE 768
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAalaRRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 769 DSQN-LCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKiEMERILDNHNKELEKLREE 847
Cdd:COG4942 101 AQKEeLAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA-ELAALRAELEAERAELEAL 179
|
170 180 190
....*....|....*....|....*....|....*....
gi 1254044744 848 LKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNL 886
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAEL 218
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
554-1087 |
1.40e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 554 EQRKVLESKASVADEFGTLMSSLNSLREENRQYE---------EETRSLQTNIRTLQD-----EVYQHQDAITEWKNRAE 619
Cdd:COG4913 219 EEPDTFEAADALVEHFDDLERAHEALEDAREQIEllepirelaERYAAARERLAELEYlraalRLWFAQRRLELLEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 620 KAEEYIEKENHRVQNAssshDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSLKEK 699
Cdd:COG4913 299 ELRAELARLEAELERL----EARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLP 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 700 VDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQN-LCERLK 778
Cdd:COG4913 375 LPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDaLAEALG 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 779 -----------------------------------------AQYEKADKKYEETK----VQLREAEDLADRLQAAQI--- 810
Cdd:COG4913 455 ldeaelpfvgelievrpeeerwrgaiervlggfaltllvppEHYAAALRWVNRLHlrgrLVYERVRTGLPDPERPRLdpd 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 811 -LSGNVESKFSDMQKESKIEMERI-----------LDNH----------------------------------NKE-LEK 843
Cdd:COG4913 535 sLAGKLDFKPHPFRAWLEAELGRRfdyvcvdspeeLRRHpraitragqvkgngtrhekddrrrirsryvlgfdNRAkLAA 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 844 LREELKKSHTEHTSLESVLEEQQNELAQLQDQLReekeqssnllvlnqkieksekekerLEEQIRSHTSQNSDTS---KT 920
Cdd:COG4913 615 LEAELAELEEELAEAEERLEALEAELDALQERRE-------------------------ALQRLAEYSWDEIDVAsaeRE 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 921 ISDLEDKISELLKTNDllalDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNatpsdsaEIAELTTENARLAGELlk 1000
Cdd:COG4913 670 IAELEAELERLDASSD----DLAALEEQLEELEAELEELEEELDELKGEIGRLEK-------ELEQAEEELDELQDRL-- 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 1001 sHSAAERSLQMEKEKISKQFEERLKTANLEKTR--LASELQMADSRKNTLEKQVDELQSQV----ETAERNRRRDLHQLD 1074
Cdd:COG4913 737 -EAAEDLARLELRALLEERFAAALGDAVERELRenLEERIDALRARLNRAEEELERAMRAFnrewPAETADLDADLESLP 815
|
650
....*....|...
gi 1254044744 1075 MVREELHQVKNDN 1087
Cdd:COG4913 816 EYLALLDRLEEDG 828
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
730-933 |
2.94e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 730 ETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREA----------- 798
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELekeiaelrael 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 799 ----EDLADRLQAAQILSGNVESKFSDMQKESK--IEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQL 872
Cdd:COG4942 100 eaqkEELAELLRALYRLGRQPPLALLLSPEDFLdaVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1254044744 873 QDQLREEKEQssnllvLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLK 933
Cdd:COG4942 180 LAELEEERAA------LEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
413-627 |
4.16e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 4.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 413 LLAAESRAQQAEEDVRDMKERIITSKKDDDSN----NLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDE 488
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALkkeeKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 489 AKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLksqVQLQQQLEQDLELQKKRVQELTEQRKVLES-KASVAD 567
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDA---VRRLQYLKYLAPARREQAEELRADLAELAAlRAELEA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 568 EFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEK 627
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
167-501 |
4.19e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 48.13 E-value: 4.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 167 DVNSLKRELEAEKIASNAEAARLKSELQKAKNEIQDSiKDGDSEKDAMEQEIENLQRQlnikTASLQSLMLAKSDSSKTD 246
Cdd:PRK10929 24 DEKQITQELEQAKAAKTPAQAEIVEALQSALNWLEER-KGSLERAKQYQQVIDNFPKL----SAELRQQLNNERDEPRSV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 247 KLseenetlKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAisvndvSRQNMDSLSeklsemdrTLREEQQQKSQLRSQTE 326
Cdd:PRK10929 99 PP-------NMSTDALEQEILQVSSQLLEKSRQAQQEQDR------AREISDSLS--------QLPQQQTEARRQLNEIE 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 327 TLKNALSTSESTLSMLKDKLAQFEQNALDLKN---ENAQMKTSTResilfesgrikelqQALSdekdnnailnvqlrekd 403
Cdd:PRK10929 158 RRLQTLGTPNTPLAQAQLTALQAESAALKALVdelELAQLSANNR--------------QELA----------------- 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 404 gkidRIQVDLlaAESRAQQAEEDVRDMKERIitskkdddsNNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLG 483
Cdd:PRK10929 207 ----RLRSEL--AKKRSQQLDAYLQALRNQL---------NSQRQREAERALESTELLAEQSGDLPKSIVAQFKINRELS 271
|
330 340
....*....|....*....|..
gi 1254044744 484 RSLDEakrQLQKM----SEQRQ 501
Cdd:PRK10929 272 QALNQ---QAQRMdliaSQQRQ 290
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
824-1090 |
4.34e-05 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 47.37 E-value: 4.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 824 KESKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLVLnqkieksekekerl 903
Cdd:pfam19220 47 KSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIE-------------- 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 904 eeqIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAE 983
Cdd:pfam19220 113 ---LRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQAAE 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 984 IAELTTENARLAGeLLKSHSAAERSL-------QMEKEKISKQFEERLKTANLEKTRLASELQMADSRKNTLEK------ 1050
Cdd:pfam19220 190 LAELTRRLAELET-QLDATRARLRALegqlaaeQAERERAEAQLEEAVEAHRAERASLRMKLEALTARAAATEQllaear 268
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1254044744 1051 -QVDELQSQVETAERNRRRDLHQLDMVREELHQVKNDNEKL 1090
Cdd:pfam19220 269 nQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERR 309
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
73-752 |
4.64e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 4.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 73 IKIELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKQqphdvnalLAEKQELRKQLDREQNEKQELFMQINSMIAKL 152
Cdd:TIGR02169 256 LTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEK--------IGELEAEIASLERSIAEKERELEDAEERLAKL 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 153 adsgdQDEINRLKSDVNSLKRELEA---EKIASNAEAARLKSELQKAKNEIQDSIKDGDS---EKDAMEQEIENLQRQLN 226
Cdd:TIGR02169 328 -----EAEIDKLLAEIEELEREIEEerkRRDKLTEEYAELKEELEDLRAELEEVDKEFAEtrdELKDYREKLEKLKREIN 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 227 iktaSLQSLMLAKSDSSKtdKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEI----QKMKDAISVNDVSRQNMDSLSE 302
Cdd:TIGR02169 403 ----ELKRELDRLQEELQ--RLSEELADLNAAIAGIEAKINELEEEKEDKALEIkkqeWKLEQLAADLSKYEQELYDLKE 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 303 KLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKD----------KLAQFEQ-----------NALD------ 355
Cdd:TIGR02169 477 EYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAsiqgvhgtvaQLGSVGEryataievaagNRLNnvvved 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 356 ----------LKNENA---------QMKTSTRE-SILFESGRIKELQQALS-DEKDNNAI-------------------- 394
Cdd:TIGR02169 557 davakeaielLKRRKAgratflplnKMRDERRDlSILSEDGVIGFAVDLVEfDPKYEPAFkyvfgdtlvvedieaarrlm 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 395 -------LNVQLREKDGKI-------DRIQVDLLAAESRAQQAEEDVRDMKeriitskkddDSNNLLQDELRRTEEKYQQ 460
Cdd:TIGR02169 637 gkyrmvtLEGELFEKSGAMtggsrapRGGILFSRSEPAELQRLRERLEGLK----------RELSSLQSELRRIENRLDE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 461 AQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARqgEDSARSMEEKATKEEIKKLKSQVQLQQQLEQ 540
Cdd:TIGR02169 707 LSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEI--ENVKSELKELEARIEELEEDLHKLEEALNDL 784
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 541 DLELQKKRVQELTEQ-RKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAE 619
Cdd:TIGR02169 785 EARLSHSRIPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKE 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 620 KAEEYIEKENHRVQNASSSH---DADITRLENEKTQMEEALEKAD---QEKDQAIREASESVRVMKREMTE--------- 684
Cdd:TIGR02169 865 ELEEELEELEAALRDLESRLgdlKKERDELEAQLRELERKIEELEaqiEKKRKRLSELKAKLEALEEELSEiedpkgede 944
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1254044744 685 ---ASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQ 752
Cdd:TIGR02169 945 eipEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
412-934 |
5.63e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 5.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 412 DLLAAESRAQQAEE------DVRDMKERIITSKKDDDSNNLLQDELR--RTEEKYQQAQKKIENLDETIKQQETQIRDLG 483
Cdd:COG4913 236 DLERAHEALEDAREqiellePIRELAERYAAARERLAELEYLRAALRlwFAQRRLELLEAELEELRAELARLEAELERLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 484 RSLDEAKRQLQKMSEQRQN------EEVARQGEDSARSMEEKATKEEI--KKLKSQVQLQQQLEQDLELQKKRVQELTEQ 555
Cdd:COG4913 316 ARLDALREELDELEAQIRGnggdrlEQLEREIERLERELEERERRRARleALLAALGLPLPASAEEFAALRAEAAALLEA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 556 RKvlESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEK----AEEYIE-KENH 630
Cdd:COG4913 396 LE--EELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGLDEAelpfVGELIEvRPEE 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 631 RV-QNA--------------SSSHDADITR-LENEKTQMEEALEKADQEKDQAIREASES---VRVMKREMTEASITSDR 691
Cdd:COG4913 474 ERwRGAiervlggfaltllvPPEHYAAALRwVNRLHLRGRLVYERVRTGLPDPERPRLDPdslAGKLDFKPHPFRAWLEA 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 692 QIQSLK--EKVDSlTRELESSRRRMeqLQEDQTK------------------FLGSHDETK-AEMMKDLHEAQDEIEKLT 750
Cdd:COG4913 554 ELGRRFdyVCVDS-PEELRRHPRAI--TRAGQVKgngtrhekddrrrirsryVLGFDNRAKlAALEAELAELEEELAEAE 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 751 NQAGQLKSKNETLTTELEDSQNLcerlkAQYEKADKKYEETKVQLREAEDladrlQAAQILSGNVESKfsdmqkeskiEM 830
Cdd:COG4913 631 ERLEALEAELDALQERREALQRL-----AEYSWDEIDVASAEREIAELEA-----ELERLDASSDDLA----------AL 690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 831 ERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSH 910
Cdd:COG4913 691 EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELREN 770
|
570 580
....*....|....*....|....*
gi 1254044744 911 TSQNSDTSKT-ISDLEDKISELLKT 934
Cdd:COG4913 771 LEERIDALRArLNRAEEELERAMRA 795
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
375-720 |
8.23e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 46.87 E-value: 8.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 375 SGRIKELQQALSDEKDNNAILNVQLREKdGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQDELRRT 454
Cdd:PRK04863 320 NEAESDLEQDYQAASDHLNLVQTALRQQ-EKIERYQADLEELEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQ 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 455 EEKYQQA----QKK------------------------IENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVA 506
Cdd:PRK04863 399 LADYQQAldvqQTRaiqyqqavqalerakqlcglpdltADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQA 478
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 507 RQ-----GEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLEskasVADEFGtlmSSLNSLRE 581
Cdd:PRK04863 479 YQlvrkiAGEVSRSEAWDVARELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAER----LLAEFC---KRLGKNLD 551
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 582 ENRQYEEETRSLQTNIRTLQDEVyqhqdaitewknrAEKAEEYIEKENHRVQnasssHDADITRLENEKTQMEEALEKAD 661
Cdd:PRK04863 552 DEDELEQLQEELEARLESLSESV-------------SEARERRMALRQQLEQ-----LQARIQRLAARAPAWLAAQDALA 613
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1254044744 662 QEKDQAIREASESVRVMK---------REMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQED 720
Cdd:PRK04863 614 RLREQSGEEFEDSQDVTEymqqllereRELTVERDELAARKQALDEEIERLSQPGGSEDPRLNALAER 681
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
682-886 |
8.24e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.36 E-value: 8.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 682 MTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDqtkflgshdetKAEMMKDLHEAQDEIEKLTNQAGQLKSKNE 761
Cdd:COG3883 7 AAPTPAFADPQIQAKQKELSELQAELEAAQAELDALQAE-----------LEELNEEYNELQAELEALQAEIDKLQAEIA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 762 TLTTELEDSQN-LCERLKAQYEK-ADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDmQKESKIEMERILDNHNK 839
Cdd:COG3883 76 EAEAEIEERREeLGERARALYRSgGSVSYLDVLLGSESFSDFLDRLSALSKIADADADLLEE-LKADKAELEAKKAELEA 154
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1254044744 840 ELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNL 886
Cdd:COG3883 155 KLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAEL 201
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
615-1092 |
1.56e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 615 KNRAEKAEEYIEKENHRVQNASSshdaDITRLENEKTQMEEALEKADQ--EKDQAIREASESVRVMKREMTEASITSDRQ 692
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISS----ELPELREELEKLEKEVKELEElkEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 693 IQSLKEKVdsltRELESSRRRMEQLQEDQTKFLgshdetkaEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQN 772
Cdd:PRK03918 268 IEELKKEI----EELEEKVKELKELKEKAEEYI--------KLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 773 LCERLkaqyEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERILDNHNKELEKLREELKKSH 852
Cdd:PRK03918 336 KEERL----EELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKIT 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 853 TEHTSLEsvleeqqNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKErleeqIRSHTSQNSDTSKTISDLEDKISELL 932
Cdd:PRK03918 412 ARIGELK-------KEIKELKKAIEELKKAKGKCPVCGRELTEEHRKEL-----LEEYTAELKRIEKELKEIEEKERKLR 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 933 KTNDLLALDVQKLSKSLDSKD--QQLKEAEDE-KNLMLEEVQAlqnatpsDSAEIAELTTENARLAGELLKSHSAAERSL 1009
Cdd:PRK03918 480 KELRELEKVLKKESELIKLKElaEQLKELEEKlKKYNLEELEK-------KAEEYEKLKEKLIKLKGEIKSLKKELEKLE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 1010 QMEKEKisKQFEERLKTANLEKTRLASEL-QMADSRKNTLEKQVDELQ-------------SQVETAERNRRRDLHQLDM 1075
Cdd:PRK03918 553 ELKKKL--AELEKKLDELEEELAELLKELeELGFESVEELEERLKELEpfyneylelkdaeKELEREEKELKKLEEELDK 630
|
490
....*....|....*..
gi 1254044744 1076 VREELHQVKNDNEKLKS 1092
Cdd:PRK03918 631 AFEELAETEKRLEELRK 647
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
248-508 |
1.80e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.39 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 248 LSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAIsvNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTET 327
Cdd:PHA02562 165 LSEMDKLNKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNI--EEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 328 LKNALSTSESTLSMLKDklaqFEQNALDLKNenaQMKTSTRESILFESG--------RIKELQQALSDEKDNNAILNVQL 399
Cdd:PHA02562 243 LLNLVMDIEDPSAALNK----LNTAAAKIKS---KIEQFQKVIKMYEKGgvcptctqQISEGPDRITKIKDKLKELQHSL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 400 REKDGKIDRIQVdllaAESRAQQAEEDVRDMKERIITSKKDddsnnllqdeLRRTEEKYQQAQKKIENLDETIKQQETQI 479
Cdd:PHA02562 316 EKLDTAIDELEE----IMDEFNEQSKKLLELKNKISTNKQS----------LITLVDKAKKVKAAIEELQAEFVDNAEEL 381
|
250 260
....*....|....*....|....*....
gi 1254044744 480 RDLGRSLDEAKRQLQKMSEQRQNEEVARQ 508
Cdd:PHA02562 382 AKLQDELDKIVKTKSELVKEKYHRGIVTD 410
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
640-885 |
2.24e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 640 DADITRLENEKTQMEEALEKADQEKDQAIREASESVRVmkREMTEASItsdrqiqslkeKVDSLTRELESSRRRMEQLQE 719
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDALQERREALQRL--AEYSWDEI-----------DVASAEREIAELEAELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 720 DQTKFlgshdetkAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETkvqlrEAE 799
Cdd:COG4913 683 SSDDL--------AALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE-----LRA 749
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 800 DLADRLQAAQIlsGNVESKFSDMQKESKIEMERILDNHNKELEKLREELKKSHTEHT--------SLESVLEE----QQN 867
Cdd:COG4913 750 LLEERFAAALG--DAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETadldadleSLPEYLALldrlEED 827
|
250
....*....|....*...
gi 1254044744 868 ELAQLQDQLREEKEQSSN 885
Cdd:COG4913 828 GLPEYEERFKELLNENSI 845
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
77-884 |
2.69e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.42 E-value: 2.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 77 LANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKQQPHDVNALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADSG 156
Cdd:TIGR00606 274 LKSRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQ 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 157 DQDEINRlksdVNSLKRELEAEKIASNAEAARLKSEL---QKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQ 233
Cdd:TIGR00606 354 LQADRHQ----EHIRARDSLIQSLATRLELDGFERGPfseRQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQAD 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 234 SLMLAKSDSS-----KTDKLSEENETLKLKVEDLQkQVSSFMSQMQDKNSEIQK------MKDAISVNDVSRQNMDSLSE 302
Cdd:TIGR00606 430 EIRDEKKGLGrtielKKEILEKKQEELKFVIKELQ-QLEGSSDRILELDQELRKaerelsKAEKNSLTETLKKEVKSLQN 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 303 KLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDL---------KNENAQMKTSTRESILF 373
Cdd:TIGR00606 509 EKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELtsllgyfpnKKQLEDWLHSKSKEINQ 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 374 ESGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESrAQQAEEDVRDMKERIITSKKD-----------DD 442
Cdd:TIGR00606 589 TRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCG-SQDEESDLERLKEEIEKSSKQramlagatavySQ 667
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 443 SNNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEKATK 522
Cdd:TIGR00606 668 FITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIP 747
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 523 EEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQrkvLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQT-----NI 597
Cdd:TIGR00606 748 ELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPE---EESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGsdldrTV 824
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 598 RTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSShdadITRLENEKTQMEEALEKADQEKDQAIrEASESVRV 677
Cdd:TIGR00606 825 QQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSK----TNELKSEKLQIGTNLQRRQQFEEQLV-ELSTEVQS 899
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 678 MKREMTEASiTSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKltNQAGQLK 757
Cdd:TIGR00606 900 LIREIKDAK-EQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKD--DYLKQKE 976
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 758 SKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREaedLADRLQAAQILSGNVESKFSDMQKESKIEMERILDNH 837
Cdd:TIGR00606 977 TELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERW---LQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMK 1053
|
810 820 830 840
....*....|....*....|....*....|....*....|....*..
gi 1254044744 838 NkELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSS 884
Cdd:TIGR00606 1054 Q-EHQKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDA 1099
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
246-882 |
3.11e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.89 E-value: 3.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 246 DKLSEENETLKLKVEDLQKQVSSF---MSQMQDKNSEIQKMKDAISvndvsrQNMDSLSEKLSEMDRTLREEQQQKSQLR 322
Cdd:PRK01156 162 NSLERNYDKLKDVIDMLRAEISNIdylEEKLKSSNLELENIKKQIA------DDEKSHSITLKEIERLSIEYNNAMDDYN 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 323 SQTETLKNaLSTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRESILFESGRIKELQQALSDE-KDNNAILNvqlre 401
Cdd:PRK01156 236 NLKSALNE-LSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYfKYKNDIEN----- 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 402 KDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSNNLLqDELRRTEEKYQQAQKKIENLDETIKQQETQIRD 481
Cdd:PRK01156 310 KKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSRYDDLNNQI-LELEGYEMDYNSYLKSIESLKKKIEEYSKNIER 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 482 LGRSLDEAkrqlqkmseqrqneevarQGEDSARSMEEKATKEEIK-KLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLE 560
Cdd:PRK01156 389 MSAFISEI------------------LKIQEIDPDAIKKELNEINvKLQDISSKVSSLNQRIRALRENLDELSRNMEMLN 450
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 561 SKaSVADEFGTLMSSLNSLREENrQYEEETRSLQTNIRTLQDEVyqhqDAITEWKNRAEKAEEYIEKENHRVQNAS---- 636
Cdd:PRK01156 451 GQ-SVCPVCGTTLGEEKSNHIIN-HYNEKKSRLEEKIREIEIEV----KDIDEKIVDLKKRKEYLESEEINKSINEynki 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 637 SSHDADITRLENEKTQMEEALEKADQEKDQaireasesVRVMKREMTEASITSDRQIQSLKEKVDsltreLESSRRRMEQ 716
Cdd:PRK01156 525 ESARADLEDIKIKINELKDKHDKYEEIKNR--------YKSLKLEDLDSKRTSWLNALAVISLID-----IETNRSRSNE 591
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 717 LQEDQTkflgshdetkaEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLR 796
Cdd:PRK01156 592 IKKQLN-----------DLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIA 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 797 EAEDLADRlqaaqilsgnveskfsdmQKESKIEMERILDNHNKeLEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQL 876
Cdd:PRK01156 661 EIDSIIPD------------------LKEITSRINDIEDNLKK-SRKALDDAKANRARLESTIEILRTRINELSDRINDI 721
|
....*.
gi 1254044744 877 REEKEQ 882
Cdd:PRK01156 722 NETLES 727
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
587-881 |
4.58e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.56 E-value: 4.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 587 EEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADIT-RLENEKTQMEEALEKAD--QE 663
Cdd:COG3096 835 EAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQANLLADETLAdRLEELREELDAAQEAQAfiQQ 914
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 664 KDQAIREASESVRVMkremteasitsdrqiQSLKEKVDSLTRELESSRRRMEQLQedqtkflgshdeTKAEMMKDL---- 739
Cdd:COG3096 915 HGKALAQLEPLVAVL---------------QSDPEQFEQLQADYLQAKEQQRRLK------------QQIFALSEVvqrr 967
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 740 -HEAQDEIEKLTNQAGQLkskNETLTTELEDSQNLCERLKAQYEKADKKYEETkvqLREAEDLADRLQAAQILSGNVESK 818
Cdd:COG3096 968 pHFSYEDAVGLLGENSDL---NEKLRARLEQAEEARREAREQLRQAQAQYSQY---NQVLASLKSSRDAKQQTLQELEQE 1041
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254044744 819 FSDMQKESKIEMERILDNHNKELEklrEELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKE 881
Cdd:COG3096 1042 LEELGVQADAEAEERARIRRDELH---EELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAER 1101
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
803-1019 |
4.62e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.23 E-value: 4.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 803 DRLQAAQILSGNVESKFSDMQKESKIEMERILDNHNKELEKL----REELKKSHTEHTSLESVLEEQQNEL-AQLQDQLR 877
Cdd:PHA02562 169 DKLNKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKngenIARKQNKYDELVEEAKTIKAEIEELtDELLNLVM 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 878 EEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSH---------TSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKS 948
Cdd:PHA02562 249 DIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYekggvcptcTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEI 328
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1254044744 949 LDSKDQQLKEAEDEKNLMLEEVQALQNATPSDS---AEIAELTTENARLAGELLKshsaaersLQMEKEKISKQ 1019
Cdd:PHA02562 329 MDEFNEQSKKLLELKNKISTNKQSLITLVDKAKkvkAAIEELQAEFVDNAEELAK--------LQDELDKIVKT 394
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
174-328 |
4.78e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 43.59 E-value: 4.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 174 ELEAEKIASNAEAARLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLmlaksdsskTDKLSEENE 253
Cdd:pfam09787 51 ELRQERDLLREEIQKLRGQIQQLRTELQELEAQQQEEAESSREQLQELEEQLATERSARREA---------EAELERLQE 121
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1254044744 254 TLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETL 328
Cdd:pfam09787 122 ELRYLEEELRRSKATLQSRIKDREAEIEKLRNQLTSKSQSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSL 196
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
557-1091 |
5.02e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.34 E-value: 5.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 557 KVLESKASVADEFGTLMSSLNSLREENRQY-EEETRSLQTNIRTLQDEvyqhQDAITEWKNRAEKAEEYIEKE-NHRVQN 634
Cdd:pfam15921 78 RVLEEYSHQVKDLQRRLNESNELHEKQKFYlRQSVIDLQTKLQEMQME----RDAMADIRRRESQSQEDLRNQlQNTVHE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 635 ASSSHDADITRLENEKTQMEEaLEKADQEKDQAIREASESV----RVMKREMTEASITSDRQIQSLKEKVDSLTRELESS 710
Cdd:pfam15921 154 LEAAKCLKEDMLEDSNTQIEQ-LRKMMLSHEGVLQEIRSILvdfeEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTE 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 711 RRRMEQL---QEDQTKFLGSHDETKAEMMKDLH---------EAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLK 778
Cdd:pfam15921 233 ISYLKGRifpVEDQLEALKSESQNKIELLLQQHqdrieqlisEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQN 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 779 AQYEKADKKYEETKVQLREA--------EDLADRLQAAQIL------------------SGNVESKFSDM-------QKE 825
Cdd:pfam15921 313 SMYMRQLSDLESTVSQLRSElreakrmyEDKIEELEKQLVLanseltearterdqfsqeSGNLDDQLQKLladlhkrEKE 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 826 SKIEME---RILDN---HNKELEKLREELKKSHTEHTSLESVLE----EQQNELAQLQDQLREEKEQSSNLLVLNQKIEK 895
Cdd:pfam15921 393 LSLEKEqnkRLWDRdtgNSITIDHLRRELDDRNMEVQRLEALLKamksECQGQMERQMAAIQGKNESLEKVSSLTAQLES 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 896 SEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNlMLEEVQALQN 975
Cdd:pfam15921 473 TKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGD-HLRNVQTECE 551
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 976 ATPSDSAE---IAELTTENARLAGELLKSHSAAERSLQMEKEKISKQFEER---LKTANLEKTRLASELQMADSRKNTLE 1049
Cdd:pfam15921 552 ALKLQMAEkdkVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRrleLQEFKILKDKKDAKIRELEARVSDLE 631
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 1254044744 1050 KQVDELQS-------QVETAERNRRRDLHQLDMVREELHQVKNDNEKLK 1091
Cdd:pfam15921 632 LEKVKLVNagserlrAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLK 680
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
563-787 |
5.79e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 5.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 563 ASVADEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDAD 642
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 643 ITRLENEKTQMEEALEKADQEKDQAI-------REASESVRVMK--REMTEASITSDRQIQSLKEKVDSLTRELESSRRR 713
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPlalllspEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1254044744 714 MEQLQEDQTkflgshdETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKK 787
Cdd:COG4942 176 LEALLAELE-------EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
680-886 |
6.40e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.85 E-value: 6.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 680 REMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIE------------ 747
Cdd:PHA02562 177 RELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLnlvmdiedpsaa 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 748 --KLTNQAGQLKSKNETLTTELE--DSQNLCERLKAQYEKADKKYEETKVQLREaedLADRLQAAQILSGNVESKFSDMQ 823
Cdd:PHA02562 257 lnKLNTAAAKIKSKIEQFQKVIKmyEKGGVCPTCTQQISEGPDRITKIKDKLKE---LQHSLEKLDTAIDELEEIMDEFN 333
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1254044744 824 KESK--IEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNL 886
Cdd:PHA02562 334 EQSKklLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSEL 398
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
455-976 |
7.02e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.74 E-value: 7.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 455 EEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQgEDSARSMEEKATKEEIKKLKSQVQL 534
Cdd:PRK01156 189 EEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALN-ELSSLEDMKNRYESEIKTAESDLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 535 QQQLEQDLELQKKRVQELTEQrKVLESKASVADEFgTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEW 614
Cdd:PRK01156 268 ELEKNNYYKELEERHMKIIND-PVYKNRNYINDYF-KYKNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 615 KNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESVRVMKREMTEASITS-DRQI 693
Cdd:PRK01156 346 SRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDiSSKV 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 694 QSLKEKVDSLTRELESSRRRMEQLQ--------------EDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSK 759
Cdd:PRK01156 426 SSLNQRIRALRENLDELSRNMEMLNgqsvcpvcgttlgeEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKR 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 760 NETLTTE----LEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQIlsGNVESKFSD----MQKESKIEME 831
Cdd:PRK01156 506 KEYLESEeinkSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKL--EDLDSKRTSwlnaLAVISLIDIE 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 832 RILDNHNKELEKLREELKKSHT-------EHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKERLE 904
Cdd:PRK01156 584 TNRSRSNEIKKQLNDLESRLQEieigfpdDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEID 663
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1254044744 905 EQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLAlDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNA 976
Cdd:PRK01156 664 SIIPDLKEITSRINDIEDNLKKSRKALDDAKANRA-RLESTIEILRTRINELSDRINDINETLESMKKIKKA 734
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
301-709 |
7.53e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.74 E-value: 7.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 301 SEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRESILFESGRIKE 380
Cdd:PLN02939 27 SRRRLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 381 LQQALSDE-----KDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVrdmkERIITSKKDddsnnlLQDELRRTE 455
Cdd:PLN02939 107 AIAAIDNEqqtnsKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDL----EKILTEKEA------LQGKINILE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 456 EKYQQAQKKIENLDEtiKQQETQIRDlgrsldeakRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQ 535
Cdd:PLN02939 177 MRLSETDARIKLAAQ--EKIHVEILE---------EQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 536 QQLEQDLELQKKRVQELTEQRKVLEskASVAD-EFGTLMSSLNSLREENRQYE---EETRSLQTNIRTLQDEV------- 604
Cdd:PLN02939 246 KAELIEVAETEERVFKLEKERSLLD--ASLRElESKFIVAQEDVSKLSPLQYDcwwEKVENLQDLLDRATNQVekaalvl 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 605 YQHQDaiteWKNRAEKAEEYIEKENhrvQNASSSHDADItrLENEKTQMEEALEKADQEKDQAIREASESVRVMKRemTE 684
Cdd:PLN02939 324 DQNQD----LRDKVDKLEASLKEAN---VSKFSSYKVEL--LQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQD--TL 392
|
410 420
....*....|....*....|....*
gi 1254044744 685 ASITSDRQIQSLKEKVDSLTRELES 709
Cdd:PLN02939 393 SKLKEESKKRSLEHPADDMPSEFWS 417
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
215-520 |
8.26e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 8.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 215 EQEIENLQRQLNIKTASLQSLmlaksdSSKTDKLSEENETLKLKVEDLQKQVSSFM----SQMQDKNSEIQKMKDAISVN 290
Cdd:PRK04863 836 EAELRQLNRRRVELERALADH------ESQEQQQRSQLEQAKEGLSALNRLLPRLNlladETLADRVEEIREQLDEAEEA 909
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 291 DVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFE----QNALDLKNENAQMKTS 366
Cdd:PRK04863 910 KRFVQQHGNALAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAhfsyEDAAEMLAKNSDLNEK 989
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 367 TREsilfesgRIKELQQALSDEKDnnailnvQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERI--ITSKKDDDSN 444
Cdd:PRK04863 990 LRQ-------RLEQAEQERTRARE-------QLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELqdLGVPADSGAE 1055
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 445 NL-------LQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQL--QKMS-------------EQRQN 502
Cdd:PRK04863 1056 ERararrdeLHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVvnAKAGwcavlrlvkdngvERRLH 1135
|
330
....*....|....*....
gi 1254044744 503 -EEVARQGEDSARSMEEKA 520
Cdd:PRK04863 1136 rRELAYLSADELRSMSDKA 1154
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
43-790 |
8.40e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.81 E-value: 8.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 43 RLEQELTQAQICNHRLNQQLKVLANSSDKAIKIELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKQQPHDVNALLA 122
Cdd:pfam02463 247 RDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 123 EKQELRKQLDREQNEKQELFMQINS--MIAKLADSGDQDEINRLKSDVNSLKRELEAEKIASNAE--------------A 186
Cdd:pfam02463 327 EKELKKEKEEIEELEKELKELEIKReaEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKlkeeelelkseeekE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 187 ARLKSELQKAKNEIQDSIKDGDSEKDAMEQE-IENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKLKVEDLQKQ 265
Cdd:pfam02463 407 AQLLLELARQLEDLLKEEKKEELEILEEEEEsIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 266 vssfmsqmQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDK 345
Cdd:pfam02463 487 --------ELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATAD 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 346 LAQFEQNALDLKNENAQMKTSTRESILFESGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEE 425
Cdd:pfam02463 559 EVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLK 638
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 426 DVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEV 505
Cdd:pfam02463 639 ESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLE 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 506 ARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREENRQ 585
Cdd:pfam02463 719 AEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKA 798
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 586 YEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQE-- 663
Cdd:pfam02463 799 QEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEee 878
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 664 -KDQAIREASESVRVMKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEA 742
Cdd:pfam02463 879 lEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEE 958
|
730 740 750 760
....*....|....*....|....*....|....*....|....*...
gi 1254044744 743 QDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEE 790
Cdd:pfam02463 959 EERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKK 1006
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
163-712 |
8.43e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 43.67 E-value: 8.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 163 RLKSDVNSLKRELEAEKIASNAEAARLKSELQKAKNEIQDSIKDGDSE----KDAMEQEIENLQRQLNIKTASLQSLMLA 238
Cdd:pfam12128 387 QNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEfneeEYRLKSRLGELKLRLNQATATPELLLQL 466
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 239 KSDSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISvndVSRQNMDSLSEKLSEMDRTLREEQQQK 318
Cdd:pfam12128 467 ENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLE---ERQSALDELELQLFPQAGTLLHFLRKE 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 319 SQLRSQ-------TETLKNALSTSESTLSMLKDKLAQFEQNaLDLK----NENAQMKTSTREsilfesgRIKELQQALSD 387
Cdd:pfam12128 544 APDWEQsigkvisPELLHRTDLDPEVWDGSVGGELNLYGVK-LDLKridvPEWAASEEELRE-------RLDKAEEALQS 615
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 388 EKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRdmkeriitskkdddsnnllqdelRRTEEKYQQAQKKIEN 467
Cdd:pfam12128 616 AREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLR-----------------------RLFDEKQSEKDKKNKA 672
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 468 LDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNE--------EVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLE 539
Cdd:pfam12128 673 LAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQkreartekQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKAL 752
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 540 QDLELQK--------KRVQELTEQRKVLESKASVADEFGTLMSSLNSLREEnrQYEEETRSLQTNIRTLQDEVYQHQDAI 611
Cdd:pfam12128 753 ETWYKRDlaslgvdpDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQE--TWLQRRPRLATQLSNIERAISELQQQL 830
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 612 TEWKNRAEKAEEYIEKENHrvqnassSHDADITRLENEKTQMEEALEK-ADQEKDQAIREASESVRVMKREMTEASITSD 690
Cdd:pfam12128 831 ARLIADTKLRRAKLEMERK-------ASEKQQVRLSENLRGLRCEMSKlATLKEDANSEQAQGSIGERLAQLEDLKLKRD 903
|
570 580
....*....|....*....|..
gi 1254044744 691 RQIQSLKEKVDSLTRELESSRR 712
Cdd:pfam12128 904 YLSESVKKYVEHFKNVIADHSG 925
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
742-1008 |
8.48e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 8.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 742 AQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEdladrlqaaqilsgnveskfsd 821
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALE---------------------- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 822 mqkeskiemerildnhnKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKE 901
Cdd:COG4942 76 -----------------QELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 902 RLEEQIrshtsqNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDS 981
Cdd:COG4942 139 QYLKYL------APARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELA 212
|
250 260
....*....|....*....|....*..
gi 1254044744 982 AEIAELTTENARLAGELLKSHSAAERS 1008
Cdd:COG4942 213 AELAELQQEAEELEALIARLEAEAAAA 239
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
652-779 |
9.06e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 9.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 652 QMEEALEKADQEKDQAIREASESVRVMKREMTEasitSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLgshDET 731
Cdd:COG2433 385 LIEKELPEEEPEAEREKEHEERELTEEEEEIRR----LEEQVERLEAEVEELEAELEEKDERIERLERELSEAR---SEE 457
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1254044744 732 KAEMMKDlheaqDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKA 779
Cdd:COG2433 458 RREIRKD-----REISRLDREIERLERELEEERERIEELKRKLERLKE 500
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
279-799 |
1.02e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.17 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 279 EIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALstsestlsmlKDKLAQFEQNALDLKN 358
Cdd:pfam05483 139 EIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNI----------EKMILAFEELRVQAEN 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 359 ENAQMKTSTRESILFESGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIitsK 438
Cdd:pfam05483 209 ARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENL---K 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 439 KDDDSNNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLgrsLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEE 518
Cdd:pfam05483 286 ELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQL---TEEKEAQMEELNKAKAAHSFVVTEFEATTCSLE 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 519 KATKEEIKKLKSQVQLQQQLEQDLelqKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREENRQYEEETRSLQTN-- 596
Cdd:pfam05483 363 ELLRTEQQRLEKNEDQLKIITMEL---QKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKeq 439
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 597 -----IRTLQDEVYQHQDAITEWKNRAEKAEEYIEK-----ENHRVQNASSSHDADITRLENEKTQMEEA---LEKADQE 663
Cdd:pfam05483 440 eliflLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDlktelEKEKLKNIELTAHCDKLLLENKELTQEASdmtLELKKHQ 519
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 664 KDqAIREASESVRVMKremteasitsdrQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQ 743
Cdd:pfam05483 520 ED-IINCKKQEERMLK------------QIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKE 586
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1254044744 744 DEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAE 799
Cdd:pfam05483 587 KQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLE 642
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
184-886 |
1.06e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.17 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 184 AEAARLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQlnIKTASLQSLMLAKSDSSKTDKLSEEnetLKLKVEDLQ 263
Cdd:pfam05483 165 ARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQ--AENARLEMHFKLKEDHEKIQHLEEE---YKKEINDKE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 264 KQVSSFMSQMQDKNSeiqKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLK 343
Cdd:pfam05483 240 KQVSLLLIQITEKEN---KMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALE 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 344 DKLAQFEQNALDLKNENAQMKTSTRESILFESGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQA 423
Cdd:pfam05483 317 EDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEM 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 424 EEDVRDMKERIITSKKDDDSNNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLgrsldEAKRQLQKMSEQRQNE 503
Cdd:pfam05483 397 TKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDL-----EIQLTAIKTSEEHYLK 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 504 EVarqgedsaRSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEFGTLMSSLNSLREEN 583
Cdd:pfam05483 472 EV--------EDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKE 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 584 RQYEEETRSLQTNIRTLQDEVyqhqdaitewKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEalekadqe 663
Cdd:pfam05483 544 MNLRDELESVREEFIQKGDEV----------KCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIEN-------- 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 664 KDQAIREASESVRVMKREMTEASitsdRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKflgshdetkaemmkdlheaq 743
Cdd:pfam05483 606 KNKNIEELHQENKALKKKGSAEN----KQLNAYEIKVNKLELELASAKQKFEEIIDNYQK-------------------- 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 744 deiekltnqagqlksknetlttELEDSQNLCERLKAQYEKADKKYEETkVQLREAEDLADRLQAAQILSgnveskfsdMQ 823
Cdd:pfam05483 662 ----------------------EIEDKKISEEKLLEEVEKAKAIADEA-VKLQKEIDKRCQHKIAEMVA---------LM 709
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254044744 824 KESKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNL 886
Cdd:pfam05483 710 EKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKL 772
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
181-369 |
1.31e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 181 ASNAEAARLKSELQKAKNEI---QDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKT-DKLSEENETLK 256
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIaelEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAElAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 257 LKVEDLQKQVSSFMSQMQdKNSEIQKMKDAISVNDVS----------------RQNMDSLSEKLSEMDRTLREEQQQKSQ 320
Cdd:COG4942 97 AELEAQKEELAELLRALY-RLGRQPPLALLLSPEDFLdavrrlqylkylaparREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1254044744 321 LRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRE 369
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
109-1022 |
1.33e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.12 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 109 LSKQQPHDVNALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEAEKIASNAEAAR 188
Cdd:TIGR01612 665 LSKIYEDDIDALYNELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNELLDIIVEIKKH 744
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 189 LKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKL-KVEDLQKQVS 267
Cdd:TIGR01612 745 IHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNYdKSKEYIKTIS 824
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 268 SFMSQMQDKNSEIQKMKDA--------ISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKsqlrsQTETLKNALSTSESTL 339
Cdd:TIGR01612 825 IKEDEIFKIINEMKFMKDDflnkvdkfINFENNCKEKIDSEHEQFAELTNKIKAEISDD-----KLNDYEKKFNDSKSLI 899
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 340 SMLKDKLAQFEQNALDLKNENAQMKT--STRESI---------LFE--SGRIKELQQALSDEKDNNAILNVQLREKDGKI 406
Cdd:TIGR01612 900 NEINKSIEEEYQNINTLKKVDEYIKIceNTKESIekfhnkqniLKEilNKNIDTIKESNLIEKSYKDKFDNTLIDKINEL 979
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 407 DRI--QVDLLAAESRAQQAEEDVRDMKERIITSKKdddsnNLLQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGR 484
Cdd:TIGR01612 980 DKAfkDASLNDYEAKNNELIKYFNDLKANLGKNKE-----NMLYHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIY 1054
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 485 SLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEEkaTKEEIKKLKsqvqlqqqleqdlelqkkrvqelteqrkvleskas 564
Cdd:TIGR01612 1055 NIIDEIEKEIGKNIELLNKEILEEAEINITNFNE--IKEKLKHYN----------------------------------- 1097
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 565 vADEFGtlmsslnslREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNraeKAEEYIEKENHRVQNASSSHDADIT 644
Cdd:TIGR01612 1098 -FDDFG---------KEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKK---KSENYIDEIKAQINDLEDVADKAIS 1164
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 645 rleNEKTqmeEALEKADQEKDQAIREASESVRVMKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKf 724
Cdd:TIGR01612 1165 ---NDDP---EEIEKKIENIVTKIDKKKNIYDEIKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGKLFLEKIDEEKKK- 1237
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 725 lgSHDETKA--EMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTeledsQNLCERLKAQYEKADKKYEETKVQLREaedla 802
Cdd:TIGR01612 1238 --SEHMIKAmeAYIEDLDEIKEKSPEIENEMGIEMDIKAEMET-----FNISHDDDKDHHIISKKHDENISDIRE----- 1305
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 803 drlQAAQILSGNV-ESKFSDMQKEskiemeriLDNHNKELEKLREELKKSHTEHTSLESVLeeqqnELAQLQDQLREEKE 881
Cdd:TIGR01612 1306 ---KSLKIIEDFSeESDINDIKKE--------LQKNLLDAQKHNSDINLYLNEIANIYNIL-----KLNKIKKIIDEVKE 1369
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 882 QSSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDK-ISELLKTNDLLALDVQKLSKSLDSKDQQLKEAE 960
Cdd:TIGR01612 1370 YTKEIEENNKNIKDELDKSEKLIKKIKDDINLEECKSKIESTLDDKdIDECIKKIKELKNHILSEESNIDTYFKNADENN 1449
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1254044744 961 DEKNLMLEEVQALQNATPSDSAEIAELTTENARLAGELLKSHSAAERSLQMEKEKISKQFEE 1022
Cdd:TIGR01612 1450 ENVLLLFKNIEMADNKSQHILKIKKDNATNDHDFNINELKEHIDKSKGCKDEADKNAKAIEK 1511
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
76-602 |
1.40e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 76 ELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKQQphdVNALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADS 155
Cdd:COG4913 259 ELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAE---LEELRAELARLEAELERLEARLDALREELDELEAQIRGN 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 156 GdQDEINRLKSDVNSLKRELEA----------------EKIASNAEA-ARLKSELQKAKNEIQDSIKDGDSEKDAMEQEI 218
Cdd:COG4913 336 G-GDRLEQLEREIERLERELEErerrrarleallaalgLPLPASAEEfAALRAEAAALLEALEEELEALEEALAEAEAAL 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 219 ENLQRQLNIKTASLQSLMLAKSD-SSKTDKLSEE-NETLKLKVEDLQkqvssFMSQMQDKNSEIQKMKDAI--------- 287
Cdd:COG4913 415 RDLRRELRELEAEIASLERRKSNiPARLLALRDAlAEALGLDEAELP-----FVGELIEVRPEEERWRGAIervlggfal 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 288 ----------SVNDVSRQNmdslseKLSEMDRTLREEQQQKSQLRSQTE--TLKNALSTSESTLSM-LKDKLAQFE---- 350
Cdd:COG4913 490 tllvppehyaAALRWVNRL------HLRGRLVYERVRTGLPDPERPRLDpdSLAGKLDFKPHPFRAwLEAELGRRFdyvc 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 351 -QNALDLKNE------NAQMKTSTResiLFESGRIKELQQALSDEKDNNAilnvQLREKDGKIDRIQVDLLAAESRAQQA 423
Cdd:COG4913 564 vDSPEELRRHpraitrAGQVKGNGT---RHEKDDRRRIRSRYVLGFDNRA----KLAALEAELAELEEELAEAEERLEAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 424 EEDVRDMKERIITSKKDDDSNNLLQDeLRRTEEKYQQAQKKIENLDET---IKQQETQIRDLGRSLDEAKRQLQKMSEQR 500
Cdd:COG4913 637 EAELDALQERREALQRLAEYSWDEID-VASAEREIAELEAELERLDASsddLAALEEQLEELEAELEELEEELDELKGEI 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 501 ----QNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASvadefgTLMSSL 576
Cdd:COG4913 716 grleKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLN------RAEEEL 789
|
570 580
....*....|....*....|....*..
gi 1254044744 577 NSLREE-NRQYEEETRSLQTNIRTLQD 602
Cdd:COG4913 790 ERAMRAfNREWPAETADLDADLESLPE 816
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
297-433 |
1.49e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 42.26 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 297 MDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLknenaqmktstresilfeSG 376
Cdd:PRK09039 55 LDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAA------------------EG 116
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1254044744 377 RIKELQQALSDEKDNNA-------ILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKER 433
Cdd:PRK09039 117 RAGELAQELDSEKQVSAralaqveLLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRR 180
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
613-998 |
1.77e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 613 EWKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQaireasesvrvmkREMTEASITSDRQ 692
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQL-------------LPLYQELEALEAE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 693 IQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQN 772
Cdd:COG4717 141 LAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 773 LCERLKAQYEKADKKYEETKVQLREAEDLADRLQAAQILS--------------------------------GNVESKFS 820
Cdd:COG4717 221 ELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLAllglggsllsliltiagvlflvlgllallfllLAREKASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 821 DMQKESKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEK 900
Cdd:COG4717 301 GKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 901 ERLEEQIRS---HTSQNSDTSKTISDLEDKISELLKT--NDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQN 975
Cdd:COG4717 381 VEDEEELRAaleQAEEYQELKEELEELEEQLEELLGEleELLEALDEEELEEELEELEEELEELEEELEELREELAELEA 460
|
410 420
....*....|....*....|....*
gi 1254044744 976 --ATPSDSAEIAELTTENARLAGEL 998
Cdd:COG4717 461 elEQLEEDGELAELLQELEELKAEL 485
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
158-264 |
1.89e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 158 QDEINRLKSDVNSLKRELEAEKiasnAEAARLKSELQKAKNEIQDSIKDgDSEKDAMEQEIENLQRQLniktaslqslml 237
Cdd:COG2433 419 EEQVERLEAEVEELEAELEEKD----ERIERLERELSEARSEERREIRK-DREISRLDREIERLEREL------------ 481
|
90 100
....*....|....*....|....*..
gi 1254044744 238 aksdssktDKLSEENETLKLKVEDLQK 264
Cdd:COG2433 482 --------EEERERIEELKRKLERLKE 500
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
272-1089 |
2.03e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 42.47 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 272 QMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTS----ESTLSMLKDKLA 347
Cdd:pfam01576 6 EMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARkqelEEILHELESRLE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 348 QFEQNALDLKNENAQMKTstresilfesgRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDV 427
Cdd:pfam01576 86 EEEERSQQLQNEKKKMQQ-----------HIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKER 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 428 RDMKERIIT-----SKKDDDSNNL-------------LQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEA 489
Cdd:pfam01576 155 KLLEERISEftsnlAEEEEKAKSLsklknkheamisdLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAEL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 490 KRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEF 569
Cdd:pfam01576 235 RAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 570 GTLMSSLNSLREE-----NRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYIEKENHRVQNASSSHDADIT 644
Cdd:pfam01576 315 TAAQQELRSKREQevtelKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELR 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 645 RLENEKTQMEEALEKADQEKDQAIREASESvrvmkremteasitsDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKF 724
Cdd:pfam01576 395 TLQQAKQDSEHKRKKLEGQLQELQARLSES---------------ERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKL 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 725 lgSHDETKAEmmKDLHEAQDEIEKLTNQAGQLKSK-----------NETLTTELEDSQNL---CERLKAQYEKADKKYEE 790
Cdd:pfam01576 460 --SKDVSSLE--SQLQDTQELLQEETRQKLNLSTRlrqledernslQEQLEEEEEAKRNVerqLSTLQAQLSDMKKKLEE 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 791 TKVQLREAEDLADRLQA-AQILSGNVESKFSDMQK--ESKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQQN 867
Cdd:pfam01576 536 DAGTLEALEEGKKRLQReLEALTQQLEEKAAAYDKleKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKA 615
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 868 ELAQLQDQL----REEKEQSSNLLVLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQ 943
Cdd:pfam01576 616 ISARYAEERdraeAEAREKETRALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVE 695
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 944 KLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLageLLKSHSAAERSLQMEKEKISKQFEER 1023
Cdd:pfam01576 696 EMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQ---LVKQVRELEAELEDERKQRAQAVAAK 772
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1254044744 1024 lKTANLEKTRLASELQMADSRKNTLEKQVDELQSQVetaeRNRRRDLHQLDMVREELHQVKNDNEK 1089
Cdd:pfam01576 773 -KKLELDLKELEAQIDAANKGREEAVKQLKKLQAQM----KDLQRELEEARASRDEILAQSKESEK 833
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
45-315 |
2.04e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.59 E-value: 2.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 45 EQELTQAQicnhrLNQQLKVLAN-----SSDKAIKIELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLS----KQQPH 115
Cdd:PRK11281 57 EDKLVQQD-----LEQTLALLDKidrqkEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSlrqlESRLA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 116 DVNALLAEKQE-----------LRKQLDREQNE---KQELFMQINSMIAKLADSGdqdeinrlKSDVNSLKRELEAEKIA 181
Cdd:PRK11281 132 QTLDQLQNAQNdlaeynsqlvsLQTQPERAQAAlyaNSQRLQQIRNLLKGGKVGG--------KALRPSQRVLLQAEQAL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 182 SNAEAARLKSELQkAKNEIQDSikdGDSEKDAMEQEIENLQRQLNIktasLQSLMlaksdSSKTDKLSEENETLKLKVED 261
Cdd:PRK11281 204 LNAQNDLQRKSLE-GNTQLQDL---LQKQRDYLTARIQRLEHQLQL----LQEAI-----NSKRLTLSEKTVQEAQSQDE 270
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1254044744 262 LQK-QVSSFMSQMQDKNSEIQK--MKDAISVNDVSRQN--MDSLSEKLSEMDRTLrEEQ 315
Cdd:PRK11281 271 AARiQANPLVAQELEINLQLSQrlLKATEKLNTLTQQNlrVKNWLDRLTQSERNI-KEQ 328
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
67-439 |
2.05e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 42.34 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 67 NSSDKAIKIELANAKKQIKERVN-DVEQLKKQVSKLTTErTMWLSK-----QQPHDVNALLAEKQELRkqLDREQNEKQE 140
Cdd:PTZ00108 923 YSTANTVHFTVKLNDGVLEQWEEeGIEKVFKLKSTISTT-NMVLFDengkiKKYSDALDILKEFYLVR--LDLYKKRKEY 999
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 141 LFMQINSMIAKLADSGD------QDEINRLKSDVNSLKRELEAEKIASNAEAARLKSELQKAKNEIQDSIKDGDSEKDAM 214
Cdd:PTZ00108 1000 LLGKLERELARLSNKVRfikhviNGELVITNAKKKDLVKELKKLGYVRFKDIIKKKSEKITAEEEEGAEEDDEADDEDDE 1079
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 215 EQE---------------------IENLQRQLNIKTASLQSL---------------MLAKSDSSKTDKLSEENETLKLK 258
Cdd:PTZ00108 1080 EELgaavsydyllsmpiwsltkekVEKLNAELEKKEKELEKLknttpkdmwledldkFEEALEEQEEVEEKEIAKEQRLK 1159
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 259 VEDLQKQ-----VSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALS 333
Cdd:PTZ00108 1160 SKTKGKAsklrkPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSS 1239
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 334 TSESTLSMLKDKL---AQFEQNALDLKNENAQMKTSTRESILFESGriKELQQALSDEKDNNAILNVQLREKDGKIDRIQ 410
Cdd:PTZ00108 1240 VKRLKSKKNNSSKsseDNDEFSSDDLSKEGKPKNAPKRVSAVQYSP--PPPSKRPDGESNGGSKPSSPTKKKVKKRLEGS 1317
|
410 420
....*....|....*....|....*....
gi 1254044744 411 VDLLAAESRAQQAEEDVRDMKERIITSKK 439
Cdd:PTZ00108 1318 LAALKKKKKSEKKTARKKKSKTRVKQASA 1346
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
113-275 |
2.28e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 41.49 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 113 QPHDVNALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADSgdQDEINRLKSdvnslkreLEAEKIASNAEAARLKSE 192
Cdd:PRK09039 51 KDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAA--EAERSRLQA--------LLAELAGAGAAAEGRAGE 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 193 LQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLniktASLQSLMLA--KSDSSKTDKL----SEENETLKLKVEDLQKQV 266
Cdd:PRK09039 121 LAQELDSEKQVSARALAQVELLNQQIAALRRQL----AALEAALDAseKRDRESQAKIadlgRRLNVALAQRVQELNRYR 196
|
....*....
gi 1254044744 267 SSFMSQMQD 275
Cdd:PRK09039 197 SEFFGRLRE 205
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
459-675 |
2.34e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 459 QQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQNEEVARQGEDSARSMEekATKEEIKKLKSQVQLQQQL 538
Cdd:COG4913 606 FDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVA--SAEREIAELEAELERLDAS 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 539 EQDLELQKKRVQELTEQRKVLEskasvaDEFGTLMSSLNSLREENRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRA 618
Cdd:COG4913 684 SDDLAALEEQLEELEAELEELE------EELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAA 757
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1254044744 619 EKAEeyiEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASESV 675
Cdd:COG4913 758 ALGD---AVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADL 811
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
424-882 |
3.22e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 3.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 424 EEDVRDMKERIITSKKDDDSNNLLQ-DELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSEQRQN 502
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKElKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 503 EEVARQGEDSARSMEEKAtkEEIKKLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEfgtlmSSLNSLREE 582
Cdd:COG4717 128 LPLYQELEALEAELAELP--ERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATE-----EELQDLAEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 583 NRQYEEETRSLQTNIRTLQDEVYQHQDAITEWKNRAEKAEEYiekenHRVQNASSSHDADITRLenektqmeeALEKADQ 662
Cdd:COG4717 201 LEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALE-----ERLKEARLLLLIAAALL---------ALLGLGG 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 663 EKDQAIREASESVRVMKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHEA 742
Cdd:COG4717 267 SLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRI 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 743 QdEIEKLTNQAGQLKSKNETLTTELEdSQNLCERLKA----QYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESK 818
Cdd:COG4717 347 E-ELQELLREAEELEEELQLEELEQE-IAALLAEAGVedeeELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEA 424
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1254044744 819 FSDMQKESKI-EMERILDNHNKELEKLREELKKSHTEHTSLES--VLEEQQNELAQLQDQLREEKEQ 882
Cdd:COG4717 425 LDEEELEEELeELEEELEELEEELEELREELAELEAELEQLEEdgELAELLQELEELKAELRELAEE 491
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
565-1064 |
3.29e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.81 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 565 VADEFGTLMSSLNSLREENRQYEEEtrsLQTNIRTLQDEVYQHQDAITEWKnraEKAEEYIEKENHRVQNASSSHDadIT 644
Cdd:PRK01156 174 VIDMLRAEISNIDYLEEKLKSSNLE---LENIKKQIADDEKSHSITLKEIE---RLSIEYNNAMDDYNNLKSALNE--LS 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 645 RLENEKTQMEEALEKADQEKDQAIREASE-------------SVRVMKREMTEASITSDRQIQSLKEKVDSLTREL---E 708
Cdd:PRK01156 246 SLEDMKNRYESEIKTAESDLSMELEKNNYykeleerhmkiinDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEInkyH 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 709 SSRRRMEQLQEDQTKFL--GSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELED-SQNLCERLKAQYEKAD 785
Cdd:PRK01156 326 AIIKKLSVLQKDYNDYIkkKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERmSAFISEILKIQEIDPD 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 786 ---KKYEETKVQLREAEDLADRLQAAQilsGNVESKFSDMQKESKI-----------------EMERILDNHNKELEKLR 845
Cdd:PRK01156 406 aikKELNEINVKLQDISSKVSSLNQRI---RALRENLDELSRNMEMlngqsvcpvcgttlgeeKSNHIINHYNEKKSRLE 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 846 EELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLL--VLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISD 923
Cdd:PRK01156 483 EKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIesARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLED 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 924 LEDKISELLKTNDLLAL-DVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAE----------LTTENA 992
Cdd:PRK01156 563 LDSKRTSWLNALAVISLiDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENeannlnnkynEIQENK 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 993 RLAGEL------LKSHSAAERSLQMEKEKIS----------KQFEERLKTANLEKTRLASELQMADSRKNTLEKQVDELQ 1056
Cdd:PRK01156 643 ILIEKLrgkidnYKKQIAEIDSIIPDLKEITsrindiednlKKSRKALDDAKANRARLESTIEILRTRINELSDRINDIN 722
|
....*...
gi 1254044744 1057 SQVETAER 1064
Cdd:PRK01156 723 ETLESMKK 730
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
655-961 |
3.30e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 41.76 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 655 EALEKADQEKDQAIREASESVRV------MKREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFlgsh 728
Cdd:PLN03229 462 EMIEKLKKEIDLEYTEAVIAMGLqerlenLREEFSKANSQDQLMHPVLMEKIEKLKDEFNKRLSRAPNYLSLKYKL---- 537
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 729 detkaEMMKDLHEAQDEIEKltnqagqlKSKNETLTTELEDsqnlceRLKAQYEKADKKyeeTKVQLREAEDLADRLQAA 808
Cdd:PLN03229 538 -----DMLNEFSRAKALSEK--------KSKAEKLKAEINK------KFKEVMDRPEIK---EKMEALKAEVASSGASSG 595
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 809 QILSGNVESKFSDMQKESKIEMERILDNHNKELEKLREELKKshtehTSLESVLEEQQNELAQLQDQLREEKEQSSNLLV 888
Cdd:PLN03229 596 DELDDDLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKD-----TAEQTPPPNLQEKIESLNEEINKKIERVIRSSD 670
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1254044744 889 LNQKIEKSEKEKErleeqiRSHTSQNSDTSKTISDLEDKISELLKTndllALDVQKLSKSLDSKDQQLKEAED 961
Cdd:PLN03229 671 LKSKIELLKLEVA------KASKTPDVTEKEKIEALEQQIKQKIAE----ALNSSELKEKFEELEAELAAARE 733
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
775-886 |
3.55e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 3.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 775 ERLKAQYEKADKKYEETKVQ-LREAEDLADRLQAAqiLSGNVESKFSDMQK-ESKIEM-ERILDNHNKELEKLREELKKS 851
Cdd:PRK12704 38 EEAKRILEEAKKEAEAIKKEaLLEAKEEIHKLRNE--FEKELRERRNELQKlEKRLLQkEENLDRKLELLEKREEELEKK 115
|
90 100 110
....*....|....*....|....*....|....*
gi 1254044744 852 HTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNL 886
Cdd:PRK12704 116 EKELEQKQQELEKKEEELEELIEEQLQELERISGL 150
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
729-882 |
3.68e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.29 E-value: 3.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 729 DETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKVQLREAEDLADRLQaA 808
Cdd:COG1579 2 MPEDLRALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYE-E 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1254044744 809 QILSGNVESKFSDMQKEskiemeriLDNHNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQ 882
Cdd:COG1579 81 QLGNVRNNKEYEALQKE--------IESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
679-1084 |
4.61e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 679 KREMTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQtkflgshdetkaemmKDLHEAQDEIEKLTNQAGQLKS 758
Cdd:COG4717 52 EKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQ---------------EELEELEEELEELEAELEELRE 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 759 KNETLTTELEDSQNLCER--LKAQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERILDN 836
Cdd:COG4717 117 ELEKLEKLLQLLPLYQELeaLEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 837 HNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEqssnllvlnQKIEKSEKEKERLEEQIRSHTSQNSD 916
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAAL---------EERLKEARLLLLIAAALLALLGLGGS 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 917 TSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQALQNATPSDSAEIAELTTENARLAG 996
Cdd:COG4717 268 LLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 997 ELLKSHS-AAERSLQMEKEKISKQFEERLKTANLEKTRLASELQMADSRKNTLEKQVDELQSQVETAERNRRRDLHQLD- 1074
Cdd:COG4717 348 ELQELLReAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDe 427
|
410
....*....|.
gi 1254044744 1075 -MVREELHQVK 1084
Cdd:COG4717 428 eELEEELEELE 438
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
239-770 |
4.63e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 41.22 E-value: 4.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 239 KSDSSKTDKLSEENETLKLKVEDLQKQV-SSFMSQMQDKNSEIQKMKDAISVNDVSRQ---NMDSLSE--KLSEMDRTLR 312
Cdd:COG5022 888 KIDVKSISSLKLVNLELESEIIELKKSLsSDLIENLEFKTELIARLKKLLNNIDLEEGpsiEYVKLPElnKLHEVESKLK 967
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 313 EEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAQMKTSTRE--------SILFESGRIKELQQA 384
Cdd:COG5022 968 ETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEvaelqsasKIISSESTELSILKP 1047
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 385 LSDEKDNN---------AILNVQLREKDGKIDRIQVDLL-AAESRAQQAEEDVRDMKERIITSKKDDDSNNLLQ----DE 450
Cdd:COG5022 1048 LQKLKGLLllennqlqaRYKALKLRRENSLLDDKQLYQLeSTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQmiklNL 1127
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 451 LRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDE----AKRQLQKMSEQRQNEEVARQGEDSARSMEEKATKEEIK 526
Cdd:COG5022 1128 LQEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLealpSPPPFAALSEKRLYQSALYDEKSKLSSSEVNDLKNELI 1207
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 527 KLKSQVQLQQQLEQDLELQKKRVQELTEQRKVLESKASVADEFGT-----------LMSSLNSLREE-NRQYEEETRSLQ 594
Cdd:COG5022 1208 ALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNNLNKKFDTpasmsnekllsLLNSIDNLLSSyKLEEEVLPATIN 1287
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 595 TNIRTLQDEVYQ---HQDAITEWKNRAEKAEEYIEKENHRVQnaSSSHDADITRLENEKTQMEEALEKADQEKDQAIREA 671
Cdd:COG5022 1288 SLLQYINVGLFNalrTKASSLRWKSATEVNYNSEELDDWCRE--FEISDVDEELEELIQAVKVLQLLKDDLNKLDELLDA 1365
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 672 SESVrvmkremteasitSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKF-LGSHDETKAEMMKDLHEAQDEIEKLT 750
Cdd:COG5022 1366 CYSL-------------NPAEIQNLKSRYDPADKENNLPKEILKKIEALLIKQeLQLSLEGKDETEVHLSEIFSEEKSLI 1432
|
570 580
....*....|....*....|
gi 1254044744 751 NQAGQLKSKNETLTTELEDS 770
Cdd:COG5022 1433 SLDRNSIYKEEVLSSLSALL 1452
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
181-423 |
5.37e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 5.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 181 ASNAEAARLKSELQKAKNEIQDSIKDGDSEKDAMEQEIENLQRQLNIKTASLQSLmlaksdSSKTDKLSEENETLKLKVE 260
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAAL------ARRIRALEQELAALEAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 261 DLQKQVSSFMSQMQDKNSEIQKMKDAISVNdvSRQNMDSL---SEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSES 337
Cdd:COG4942 87 ELEKEIAELRAELEAQKEELAELLRALYRL--GRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 338 TLSMLKDKLAQFEQNALDLKNENAQMKTSTREsilfESGRIKELQQALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAE 417
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAE----RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
....*.
gi 1254044744 418 SRAQQA 423
Cdd:COG4942 241 ERTPAA 246
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
64-198 |
5.91e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 40.61 E-value: 5.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 64 VLANSSDKAIKIELANAKKQIKERVNDVEQLKKQVSKLTTErtmwlskqqphdVNALLAEKQELRKQLDREQNEKQELFM 143
Cdd:COG2433 381 ALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQ------------VERLEAEVEELEAELEEKDERIERLER 448
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1254044744 144 QINSM-IAKLADSGDQDEINRLKSDVNSLKRELEAEKiasnAEAARLKSELQKAKN 198
Cdd:COG2433 449 ELSEArSEERREIRKDREISRLDREIERLERELEEER----ERIEELKRKLERLKE 500
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
482-766 |
6.04e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.68 E-value: 6.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 482 LGRSLDEAKRQLQKMS----EQRQNEEVARQGEDSARSMEEkaTKEEIKKLKSQVQLQQQLEQDLElqKKRVQELTEQRK 557
Cdd:PRK05771 14 LKSYKDEVLEALHELGvvhiEDLKEELSNERLRKLRSLLTK--LSEALDKLRSYLPKLNPLREEKK--KVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 558 VLESKASVADEfgtlmsSLNSLREENRQYEEETRSLQTNIRTLQdevyqhqdaitEWKNRAEKAEEYIEKENHRVQNASS 637
Cdd:PRK05771 90 DVEEELEKIEK------EIKELEEEISELENEIKELEQEIERLE-----------PWGNFDLDLSLLLGFKYVSVFVGTV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 638 SHDADItRLENEKTQMEEALEKADQEKDQAI----REASESVRVMKREM------TEASITSDRQIQSLKEKVDSLTREL 707
Cdd:PRK05771 153 PEDKLE-ELKLESDVENVEYISTDKGYVYVVvvvlKELSDEVEEELKKLgferleLEEEGTPSELIREIKEELEEIEKER 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1254044744 708 ESSRRRMEQLQEDQTKFLGSHDetkaemmkdlheaqdeiEKLTNQAGQLKSKNETLTTE 766
Cdd:PRK05771 232 ESLLEELKELAKKYLEELLALY-----------------EYLEIELERAEALSKFLKTD 273
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
71-489 |
6.20e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.77 E-value: 6.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 71 KAIKIELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKQQphDVNALLAEKQELRKQLDREQNEKQELFMQINSMIA 150
Cdd:TIGR04523 317 KNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENS--EKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIN 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 151 KLADSGDQDEINRLKSDVNSLKRELEAEKIASnaEAARLKSELQKAKNEIQD----------SIKDGDSEKDAMEQEIEN 220
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEK--EIERLKETIIKNNSEIKDltnqdsvkelIIKNLDNTRESLETQLKV 472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 221 LQRQLN-IKTASLQSLMLAKSDSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISvndvsrqnmdS 299
Cdd:TIGR04523 473 LSRSINkIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIS----------D 542
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 300 LSEKLSEMDRTLREEQ--QQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNALDLKNENAqMKTSTRESILFESGR 377
Cdd:TIGR04523 543 LEDELNKDDFELKKENleKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIE-EKEKKISSLEKELEK 621
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 378 IKELQQALSDEKDN----NAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDD-------SNNL 446
Cdd:TIGR04523 622 AKKENEKLSSIIKNikskKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLKELSlhykkyiTRMI 701
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1254044744 447 LQDELRRTEEKYQQAQKKIENLDETIKQQETQIRDLGRSLDEA 489
Cdd:TIGR04523 702 RIKDLPKLEEKYKEIEKELKKLDEFSKELENIIKNFNKKFDDA 744
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
303-987 |
7.19e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 7.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 303 KLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQFEQnalDLKNENAQMKTSTRESILFESGRIKELQ 382
Cdd:TIGR02169 224 EGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQ---LLEELNKKIKDLGEEEQLRVKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 383 QALSDEKDNNAILNVQLREKDGKIDRIQVDLLAAESRAQQAEEDVRDMKERIITSKKDDDSnnlLQDELRRTEEKYQQAQ 462
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAE---LKEELEDLRAELEEVD 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 463 KKIENLDETIKQQETQIRDLGRSLDEAKRQLQKMSE--QRQNEEVARQGEDSARSMEEKATKEEIKKLKsqvqlqqqleq 540
Cdd:TIGR02169 378 KEFAETRDELKDYREKLEKLKREINELKRELDRLQEelQRLSEELADLNAAIAGIEAKINELEEEKEDK----------- 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 541 dlelqKKRVQELTEQRKvleskaSVADEFGTLMSSLNSLREENRQYEEETRSLQTNIrtlqDEVYQHQDAITEWKNRAEK 620
Cdd:TIGR02169 447 -----ALEIKKQEWKLE------QLAADLSKYEQELYDLKEEYDRVEKELSKLQREL----AEAEAQARASEERVRGGRA 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 621 AEEYIEKENHRVQNAssshdadITRLENEKTQMEEALEKADQEKDQAIREASESV---------------------RVMK 679
Cdd:TIGR02169 512 VEEVLKASIQGVHGT-------VAQLGSVGERYATAIEVAAGNRLNNVVVEDDAVakeaiellkrrkagratflplNKMR 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 680 REMTEASITS--------------DRQIQSLKEKVDSLT---RELESSRRRMEQ---------LQEDQTKFLGSHDETKA 733
Cdd:TIGR02169 585 DERRDLSILSedgvigfavdlvefDPKYEPAFKYVFGDTlvvEDIEAARRLMGKyrmvtlegeLFEKSGAMTGGSRAPRG 664
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 734 EMMKDLHEaQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCERLKAQYEKADKKYEETKvqlREAEDLADRLQAAQILSG 813
Cdd:TIGR02169 665 GILFSRSE-PAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIE---KEIEQLEQEEEKLKERLE 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 814 NVESKFSDMQKEsKIEMERILDNHNKELEKLREELKKSHTEHTSLESVLEEQ--QNELAQLQDQLREEKEQSSNLLVLNQ 891
Cdd:TIGR02169 741 ELEEDLSSLEQE-IENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSriPEIQAELSKLEEEVSRIEARLREIEQ 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 892 KIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDVQKLSKSLDSKDQQLKEAEDEKNLMLEEVQ 971
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLR 899
|
730
....*....|....*.
gi 1254044744 972 ALQNATPSDSAEIAEL 987
Cdd:TIGR02169 900 ELERKIEELEAQIEKK 915
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
20-345 |
8.42e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.27 E-value: 8.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 20 SSSAPEDTTTNSLMAEKEASLVVRLEQELTQAQICNHRLNQQLKVLANSSDKAIK--IELANAKKQIKERVNDVEQLKKQ 97
Cdd:PLN02939 88 QKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKniLLLNQARLQALEDLEKILTEKEA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 98 VSKLTTERTMWLSKQqphDVNALLAEKQELRKQLDREQNEKQELFMQINSMIAKLADSGDQDEINRLKSDVNSLKRELEA 177
Cdd:PLN02939 168 LQGKINILEMRLSET---DARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQF 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 178 ekiasnaeaarLKSELqkakneiqDSIKDGDSEKDAMEQE---IENLQRQLNIKTASLQSLMLaKSDSSKTDKLSEENET 254
Cdd:PLN02939 245 -----------LKAEL--------IEVAETEERVFKLEKErslLDASLRELESKFIVAQEDVS-KLSPLQYDCWWEKVEN 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 255 LKLKVEDLQKQVSSF---MSQMQDKNSEIQKMKDAISVNDVSR---QNMDSLSEKLsemdrTLREEQQQKS--QLRSQTE 326
Cdd:PLN02939 305 LQDLLDRATNQVEKAalvLDQNQDLRDKVDKLEASLKEANVSKfssYKVELLQQKL-----KLLEERLQASdhEIHSYIQ 379
|
330
....*....|....*....
gi 1254044744 327 TLKNALSTSESTLSMLKDK 345
Cdd:PLN02939 380 LYQESIKEFQDTLSKLKEE 398
|
|
| PRK10884 |
PRK10884 |
SH3 domain-containing protein; Provisional |
213-280 |
8.92e-03 |
|
SH3 domain-containing protein; Provisional
Pssm-ID: 182809 [Multi-domain] Cd Length: 206 Bit Score: 38.87 E-value: 8.92e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1254044744 213 AMEQEIENLQRQL-------NIKTASLQSlMLAKSDSSKTDkLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEI 280
Cdd:PRK10884 97 DLENQVKTLTDKLnnidntwNQRTAEMQQ-KVAQSDSVING-LKEENQKLKNQLIVAQKKVDAANLQLDDKQRTI 169
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
43-227 |
9.06e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 9.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 43 RLEQELTQAQICNHRLNQQLKVLAnssDKAIKIELANAKKQIKERVNDVEQLKKQVSKLTTERTMWLSKQQPHDVNALLA 122
Cdd:COG4913 266 AARERLAELEYLRAALRLWFAQRR---LELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQ 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 123 EKQELRkQLDREQNEKQELFMQINSMIA--KLADSGDQDEINRLKSDVNSLKRELEAEKIASNAEAARLKSELQKAKNEi 200
Cdd:COG4913 343 LEREIE-RLERELEERERRRARLEALLAalGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRE- 420
|
170 180
....*....|....*....|....*...
gi 1254044744 201 qdsikdgdseKDAMEQEIENL-QRQLNI 227
Cdd:COG4913 421 ----------LRELEAEIASLeRRKSNI 438
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
66-268 |
9.51e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 9.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 66 ANSSDKAIKIELANAKKQIKERVNDVEQLKKQVSKL-----TTERTMWLSKQQPHDVNALLAEKQ----ELRKQLDREQN 136
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALlkqlaALERRIAALARRIRALEQELAALEaelaELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 137 EKQELFMQINSMIAKLADSGDQDEINRLKS--DVNSLKRELEAEKIASNAEAARLKS------ELQKAKNEIQDSIKDGD 208
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSpeDFLDAVRRLQYLKYLAPARREQAEElradlaELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1254044744 209 SEKDAMEQEIENLQRQLNIKTASLQSLmlaksdSSKTDKLSEENETLKLKVEDLQKQVSS 268
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARL------EKELAELAAELAELQQEAEELEALIAR 231
|
|
| |
