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Conserved domains on  [gi|1734323508|ref|NP_001359771|]
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BTB domain-containing protein [Caenorhabditis elegans]

Protein Classification

DUF1265 domain-containing protein( domain architecture ID 10536424)

DUF1265 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1265 pfam06887
Protein of unknown function (DUF1265); This family represents a conserved region approximately ...
 201-246 9.01e-26

Protein of unknown function (DUF1265); This family represents a conserved region approximately 50 residues long within a number of proteins of unknown function that seem to be restricted to C. elegans. The GO annotation for this protein indicate that its a protein involved in nematode larval development and has a positive regulation on growth rate.


:

Pssm-ID: 462030  Cd Length: 46  Bit Score: 96.28  E-value: 9.01e-26
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1734323508 201 EELKKNHGDLEYVCNMLIVAEDAKFPNVQSCCIATLVYYHFNDFMR 246
Cdd:pfam06887   1 EELVKNHEDLMYVCNMLIVAEDARFGNLQNCCHATIIFYHFADFIR 46
 
Name Accession Description Interval E-value
DUF1265 pfam06887
Protein of unknown function (DUF1265); This family represents a conserved region approximately ...
 201-246 9.01e-26

Protein of unknown function (DUF1265); This family represents a conserved region approximately 50 residues long within a number of proteins of unknown function that seem to be restricted to C. elegans. The GO annotation for this protein indicate that its a protein involved in nematode larval development and has a positive regulation on growth rate.


Pssm-ID: 462030  Cd Length: 46  Bit Score: 96.28  E-value: 9.01e-26
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1734323508 201 EELKKNHGDLEYVCNMLIVAEDAKFPNVQSCCIATLVYYHFNDFMR 246
Cdd:pfam06887   1 EELVKNHEDLMYVCNMLIVAEDARFGNLQNCCHATIIFYHFADFIR 46
 
Name Accession Description Interval E-value
DUF1265 pfam06887
Protein of unknown function (DUF1265); This family represents a conserved region approximately ...
 201-246 9.01e-26

Protein of unknown function (DUF1265); This family represents a conserved region approximately 50 residues long within a number of proteins of unknown function that seem to be restricted to C. elegans. The GO annotation for this protein indicate that its a protein involved in nematode larval development and has a positive regulation on growth rate.


Pssm-ID: 462030  Cd Length: 46  Bit Score: 96.28  E-value: 9.01e-26
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1734323508 201 EELKKNHGDLEYVCNMLIVAEDAKFPNVQSCCIATLVYYHFNDFMR 246
Cdd:pfam06887   1 EELVKNHEDLMYVCNMLIVAEDARFGNLQNCCHATIIFYHFADFIR 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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