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Conserved domains on  [gi|1767286465|ref|NP_001362007|]
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SPK domain-containing protein [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
53-164 1.13e-45

domain in SET and PHD domain containing proteins and protein kinases;


:

Pssm-ID: 214732  Cd Length: 114  Bit Score: 155.03  E-value: 1.13e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767286465   53 DDVRLMTFLVEKTKEANEPL-VATKVFMEFGKKENARC-SDGAYYRKFHKKLAPNMDQLDNYSIESRLRVMLGLVGEVSD 130
Cdd:smart00583   1 ELTRFMDFLVEKTKDAIEPLvVPLKVFEEFSKLEGNSLlSYETYYKRFHNKLAPNMIKLNNYSIEERIRMMFALSGKVED 80

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1767286465  131 DFLTQVQTEGIVVLNDGKRICEYASRDGKLKLEA 164
Cdd:smart00583  81 DFLERIRTIGTVELDEKRRICKYKSNDGKLKLEG 114
SPK super family cl11619
Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region ...
 1-31 5.35e-07

Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region represented by this family can is found to be repeated up to four time in some proteins.


The actual alignment was detected with superfamily member smart00583:

Pssm-ID: 472233  Cd Length: 114  Bit Score: 48.33  E-value: 5.35e-07
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1767286465    1 MTLIKSTGTVKIDKKMRICNYKSRDGKLTLE 31
Cdd:smart00583  83 LERIRTIGTVELDEKRRICKYKSNDGKLKLE 113
 
Name Accession Description Interval E-value
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
53-164 1.13e-45

domain in SET and PHD domain containing proteins and protein kinases;


Pssm-ID: 214732  Cd Length: 114  Bit Score: 155.03  E-value: 1.13e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767286465   53 DDVRLMTFLVEKTKEANEPL-VATKVFMEFGKKENARC-SDGAYYRKFHKKLAPNMDQLDNYSIESRLRVMLGLVGEVSD 130
Cdd:smart00583   1 ELTRFMDFLVEKTKDAIEPLvVPLKVFEEFSKLEGNSLlSYETYYKRFHNKLAPNMIKLNNYSIEERIRMMFALSGKVED 80

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1767286465  131 DFLTQVQTEGIVVLNDGKRICEYASRDGKLKLEA 164
Cdd:smart00583  81 DFLERIRTIGTVELDEKRRICKYKSNDGKLKLEG 114
SPK pfam04435
Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region ...
 57-161 3.06e-29

Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region represented by this family can is found to be repeated up to four time in some proteins.


Pssm-ID: 461308  Cd Length: 104  Bit Score: 110.69  E-value: 3.06e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767286465  57 LMTFLVEKTKEANEPLVATKVFMEFGKKENARCSDGAYYRKFHKKLApNMDQLDNYSIESRLRVMLGLVGEVSDDFLTQV 136
Cdd:pfam04435   1 LLKFLAEKTKNATEPLSLTQLCREFKEKTGSKLSVSTLRKRFRRILA-KIHKLEEYDLETKVRMLFALSAPVDEDFLKEL 79

                          90       100
                  ....*....|....*....|....*
gi 1767286465 137 QTEGIVVLNDGKRICEYASRDGKLK 161
Cdd:pfam04435  80 RKDATVELDEKNRIIKYKSNDGSLE 104
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
1-31 5.35e-07

domain in SET and PHD domain containing proteins and protein kinases;


Pssm-ID: 214732  Cd Length: 114  Bit Score: 48.33  E-value: 5.35e-07
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1767286465    1 MTLIKSTGTVKIDKKMRICNYKSRDGKLTLE 31
Cdd:smart00583  83 LERIRTIGTVELDEKRRICKYKSNDGKLKLE 113
SPK pfam04435
Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region ...
 4-29 1.12e-03

Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region represented by this family can is found to be repeated up to four time in some proteins.


Pssm-ID: 461308  Cd Length: 104  Bit Score: 38.27  E-value: 1.12e-03
                          10        20
                  ....*....|....*....|....*.
gi 1767286465   4 IKSTGTVKIDKKMRICNYKSRDGKLT 29
Cdd:pfam04435  79 LRKDATVELDEKNRIIKYKSNDGSLE 104
 
Name Accession Description Interval E-value
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
53-164 1.13e-45

domain in SET and PHD domain containing proteins and protein kinases;


Pssm-ID: 214732  Cd Length: 114  Bit Score: 155.03  E-value: 1.13e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767286465   53 DDVRLMTFLVEKTKEANEPL-VATKVFMEFGKKENARC-SDGAYYRKFHKKLAPNMDQLDNYSIESRLRVMLGLVGEVSD 130
Cdd:smart00583   1 ELTRFMDFLVEKTKDAIEPLvVPLKVFEEFSKLEGNSLlSYETYYKRFHNKLAPNMIKLNNYSIEERIRMMFALSGKVED 80

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1767286465  131 DFLTQVQTEGIVVLNDGKRICEYASRDGKLKLEA 164
Cdd:smart00583  81 DFLERIRTIGTVELDEKRRICKYKSNDGKLKLEG 114
SPK pfam04435
Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region ...
 57-161 3.06e-29

Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region represented by this family can is found to be repeated up to four time in some proteins.


Pssm-ID: 461308  Cd Length: 104  Bit Score: 110.69  E-value: 3.06e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1767286465  57 LMTFLVEKTKEANEPLVATKVFMEFGKKENARCSDGAYYRKFHKKLApNMDQLDNYSIESRLRVMLGLVGEVSDDFLTQV 136
Cdd:pfam04435   1 LLKFLAEKTKNATEPLSLTQLCREFKEKTGSKLSVSTLRKRFRRILA-KIHKLEEYDLETKVRMLFALSAPVDEDFLKEL 79

                          90       100
                  ....*....|....*....|....*
gi 1767286465 137 QTEGIVVLNDGKRICEYASRDGKLK 161
Cdd:pfam04435  80 RKDATVELDEKNRIIKYKSNDGSLE 104
SPK smart00583
domain in SET and PHD domain containing proteins and protein kinases;
1-31 5.35e-07

domain in SET and PHD domain containing proteins and protein kinases;


Pssm-ID: 214732  Cd Length: 114  Bit Score: 48.33  E-value: 5.35e-07
                           10        20        30
                   ....*....|....*....|....*....|.
gi 1767286465    1 MTLIKSTGTVKIDKKMRICNYKSRDGKLTLE 31
Cdd:smart00583  83 LERIRTIGTVELDEKRRICKYKSNDGKLKLE 113
SPK pfam04435
Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region ...
 4-29 1.12e-03

Domain of unknown function (DUF545); Family of uncharacterized C. elegans proteins. The region represented by this family can is found to be repeated up to four time in some proteins.


Pssm-ID: 461308  Cd Length: 104  Bit Score: 38.27  E-value: 1.12e-03
                          10        20
                  ....*....|....*....|....*.
gi 1767286465   4 IKSTGTVKIDKKMRICNYKSRDGKLT 29
Cdd:pfam04435  79 LRKDATVELDEKNRIIKYKSNDGSLE 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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