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Conserved domains on  [gi|1831511181|ref|NP_001366677|]
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Small ribosomal subunit protein eS24 [Caenorhabditis elegans]

Protein Classification

eS24 family ribosomal protein( domain architecture ID 10472682)

eS24 family ribosomal protein such as archaea 30S ribosomal protein S24, and fungi 40S ribosomal protein S24

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ribosomal_S24e pfam01282
Ribosomal protein S24e;
2-80 6.35e-15

Ribosomal protein S24e;


:

Pssm-ID: 460147  Cd Length: 79  Bit Score: 63.28  E-value: 6.35e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831511181  2 VAEVILPGRPTTLKADIREKIANFYNINPDTMAKNTPLSQDDKVAKTVEQRRKDAAAHKEAYNAMPEAERRHLNSEKYA 80
Cdd:pfam01282  1 VFDVLHPGKATPSRKEIREKLAAMYNVDPDLVVVFGLRTHFGGGKSTGFAKIYDSLEAAKKFEPKHRLARNGLAEKKKA 79
 
Name Accession Description Interval E-value
Ribosomal_S24e pfam01282
Ribosomal protein S24e;
2-80 6.35e-15

Ribosomal protein S24e;


Pssm-ID: 460147  Cd Length: 79  Bit Score: 63.28  E-value: 6.35e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831511181  2 VAEVILPGRPTTLKADIREKIANFYNINPDTMAKNTPLSQDDKVAKTVEQRRKDAAAHKEAYNAMPEAERRHLNSEKYA 80
Cdd:pfam01282  1 VFDVLHPGKATPSRKEIREKLAAMYNVDPDLVVVFGLRTHFGGGKSTGFAKIYDSLEAAKKFEPKHRLARNGLAEKKKA 79
 
Name Accession Description Interval E-value
Ribosomal_S24e pfam01282
Ribosomal protein S24e;
2-80 6.35e-15

Ribosomal protein S24e;


Pssm-ID: 460147  Cd Length: 79  Bit Score: 63.28  E-value: 6.35e-15
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831511181  2 VAEVILPGRPTTLKADIREKIANFYNINPDTMAKNTPLSQDDKVAKTVEQRRKDAAAHKEAYNAMPEAERRHLNSEKYA 80
Cdd:pfam01282  1 VFDVLHPGKATPSRKEIREKLAAMYNVDPDLVVVFGLRTHFGGGKSTGFAKIYDSLEAAKKFEPKHRLARNGLAEKKKA 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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