|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
352-820 |
9.04e-22 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 101.76 E-value: 9.04e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 352 ELAKPNTEVSVLAELKKPLEAGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQ 431
Cdd:PTZ00121 1221 EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEE 1300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 432 PTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPApikstEIKPKAPKLK--E 509
Cdd:PTZ00121 1301 KKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA-----EEKAEAAEKKkeE 1375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 510 PEKPAEP----KPESIKSTEIKPKAPKL-KEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPK 584
Cdd:PTZ00121 1376 AKKKADAakkkAEEKKKADEAKKKAEEDkKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEE 1455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 585 LKEPEKPAEPKPESIKSTEIKPKApklKEPEKPAEPKPesiKSTEIKPKAPKLKEPEKpAEPKPESIKSTEIKPKAPKLK 664
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKA---EEAKKADEAKK---KAEEAKKKADEAKKAAE-AKKKADEAKKAEEAKKADEAK 1528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 665 EPEKptEDKPAPIKSTENKPEAPKLQKPKQPTepKPESIKSTEnkpEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKA 744
Cdd:PTZ00121 1529 KAEE--AKKADEAKKAEEKKKADELKKAEELK--KAEEKKKAE---EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLY 1601
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 745 PKPKTAKLAEPAKSVEFMPKASQLREPvkptvVEPEQNLKLLDKPAQPEIAKLDEPHKPTEEVLERCKALDKLWEQ 820
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAKIKAEELKKA-----EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEE 1672
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
428-796 |
1.51e-10 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 64.65 E-value: 1.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 428 KPKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKP-----------KVPKLKEPEKPTEAKPAPIK 496
Cdd:NF033838 112 EAELTSKTKKELDAAFEQFKKDTLEPGKKVAEATKKVEEAEKKAKDQKEedrrnyptntyKTLELEIAESDVEVKKAELE 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 497 STEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKapKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKST 576
Cdd:NF033838 192 LVKEEAKEPRDEEKIKQAKAKVESKKAEATRLE--KIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRRAKRGV 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 577 EIKPKAPKLKE-PEKPAEPKP--ESIKSTEIKPKApKLKEPEKpaepkpesiKSTEIKPKAPKLKEPEKPAEPKPE---- 649
Cdd:NF033838 270 LGEPATPDKKEnDAKSSDSSVgeETLPSPSLKPEK-KVAEAEK---------KVEEAKKKAKDQKEEDRRNYPTNTyktl 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 650 --SIKSTEIKPKAPKL-------KEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIK---STENKPEAPKLQK 717
Cdd:NF033838 340 elEIAESDVKVKEAELelvkeeaKEPRNEEKIKQAKAKVESKKAEATRLEKIKTDRKKAEEEAKrkaAEEDKVKEKPAEQ 419
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831518509 718 PKQPTEVKPEVPKPTEPRKTVGDKPKAPKPKTAKLAEPAKSVEFMPKASQlREPVKPtvvepeqnlkllDKPAQPEIAK 796
Cdd:NF033838 420 PQPAPAPQPEKPAPKPEKPAEQPKAEKPADQQAEEDYARRSEEEYNRLTQ-QQPPKT------------EKPAQPSTPK 485
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
399-766 |
2.56e-10 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 64.02 E-value: 2.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 399 EVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQPTE-VKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPK 477
Cdd:NF033839 165 ENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEkAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELKKQA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 478 VPKLKEPEKPTEAKPAPIKS-TEIKPKAPKLKEPEKPAEPKPESIKSTEI-KPKAPKLKEPEKLAEPKPESIKWTEIKPK 555
Cdd:NF033839 245 LSEIDNVNTKVEIENTVHKIfADMDAVVTKFKKGLTQDTPKEPGNKKPSApKPGMQPSPQPEKKEVKPEPETPKPEVKPQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 556 APKLKEPEKPAEPKPESikSTEIKPKAPKLKEPEKPAEPKPEsiksTEIKPKAPKLKEPEKPAEPKPESIKSTEiKPKAP 635
Cdd:NF033839 325 LEKPKPEVKPQPEKPKP--EVKPQLETPKPEVKPQPEKPKPE----VKPQPEKPKPEVKPQPETPKPEVKPQPE-KPKPE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 636 KLKEPEKP---AEPKPESIKStEIKPKAPKLKEPEKPTEDKPAPIKSTEnkPEAPKLQKPKQPTEPKPESikstenkpeA 712
Cdd:NF033839 398 VKPQPEKPkpeVKPQPEKPKP-EVKPQPEKPKPEVKPQPEKPKPEVKPQ--PEKPKPEVKPQPETPKPEV---------K 465
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 713 PKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPKPKTAKLAEPAKSVEFMPKAS 766
Cdd:NF033839 466 PQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKAT 519
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
396-699 |
7.14e-10 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 62.72 E-value: 7.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 396 AKAEVPKPKQPTEPKPESIKSTEIKPKApKLQKPKQPTEVKPEVPKP-TEPRKTVGDKPKAPEPKTAKLAEPAKSVETEI 474
Cdd:NF033838 216 KKAEATRLEKIKTDREKAEEEAKRRADA-KLKEAVEKNVATSEQDKPkRRAKRGVLGEPATPDKKENDAKSSDSSVGEET 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 475 KPKvPKLKEPEKPTEAKPapiKSTEIKPKAPKLKEPEKPAEPKpESIKSTEIKPKAPKLKEPEKLAEPKPEsikwteiKP 554
Cdd:NF033838 295 LPS-PSLKPEKKVAEAEK---KVEEAKKKAKDQKEEDRRNYPT-NTYKTLELEIAESDVKVKEAELELVKE-------EA 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 555 KAPKLKEPEKPAEPKPESIKSteIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPEsiksteiKPkA 634
Cdd:NF033838 363 KEPRNEEKIKQAKAKVESKKA--EATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKPAEQPQPAPAPQPE-------KP-A 432
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1831518509 635 PKlkePEKPAE-PKPEsiksteiKPKAPKLKEPE-KPTEDKPAPIksTENKPeaPKLQKPKQPTEPK 699
Cdd:NF033838 433 PK---PEKPAEqPKAE-------KPADQQAEEDYaRRSEEEYNRL--TQQQP--PKTEKPAQPSTPK 485
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
355-730 |
1.12e-08 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 58.87 E-value: 1.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 355 KPNTEVSVLAELKKPLEAGPKL--PDALEPE--IPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPK 430
Cdd:NF033838 108 KEKSEAELTSKTKKELDAAFEQfkKDTLEPGkkVAEATKKVEEAEKKAKDQKEEDRRNYPTNTYKTLELEIAESDVEVKK 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 431 QPTE-VKPEVPKPTEPRKTVGDKPKAPEPKT-AKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKA-PKL 507
Cdd:NF033838 188 AELElVKEEAKEPRDEEKIKQAKAKVESKKAeATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrAKR 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 508 KEPEKPAEP--KPESIKST-----EIKPKAPKLKEPEKLAEPKPesiKWTEIKPKAPKLKEPEKPAEPKpESIKSTEIKP 580
Cdd:NF033838 268 GVLGEPATPdkKENDAKSSdssvgEETLPSPSLKPEKKVAEAEK---KVEEAKKKAKDQKEEDRRNYPT-NTYKTLELEI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 581 KAPKLKEPEKPAEPKPESIKST--EIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEpeKPAEPKPESIKSTEIKP 658
Cdd:NF033838 344 AESDVKVKEAELELVKEEAKEPrnEEKIKQAKAKVESKKAEATRLEKIKTDRKKAEEEAKR--KAAEEDKVKEKPAEQPQ 421
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1831518509 659 KAPKlkepekPTEDKPAPikSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPK 730
Cdd:NF033838 422 PAPA------PQPEKPAP--KPEKPAEQPKAEKPADQQAEEDYARRSEEEYNRLTQQQPPKTEKPAQPSTPK 485
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
377-806 |
2.83e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 53.91 E-value: 2.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 377 PDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPK-- 454
Cdd:COG5180 20 NAARPVLSPELWAAANNDAVSQGDRSALASSPTRPYARKIFEPLDIKLALGKPQLPSVAEPEAYLDPAPPKSSPDTPEeq 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 455 ----APEPKTAKLAEPAKSVETEIKPKVPKLKEPeKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKP------------ 518
Cdd:COG5180 100 lgapAGDLLVLPAAKTPELAAGALPAPAAAAALP-KAKVTREATSASAGVALAAALLQRSDPILAKDPdgdsastlpppa 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 519 ESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKA----PKLKEPE---KPAEPKPESIKSTEIKPKAPKLKEPEKP 591
Cdd:COG5180 179 EKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAQEEPPDltggADHPRPEaasSPKVDPPSTSEARSRPATVDAQPEMRPP 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 592 AEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKE-PEKPAEPKPESIKSTEIKPKAPKLKEPEKPT 670
Cdd:COG5180 259 ADAKERRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARPIDVKGvASAPPATRPVRPPGGARDPGTPRPGQPTERP 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 671 EDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKS--------TENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKp 742
Cdd:COG5180 339 AGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRpgssggdgAPFQPPNGAPQPGLGRRGAPGPPMGAGDLVQAALDG- 417
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 743 kaPKPKTAKLAEPAKSVEFMPKAsqlrEPVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHKPTEE 806
Cdd:COG5180 418 --GGRETASLGGAAGGAGQGPKA----DFVPGDAESVSGPAGLADQAGAAASTAMADFVAPVTD 475
|
|
| CDC27 |
pfam09507 |
DNA polymerase subunit Cdc27; This protein forms the C subunit of DNA polymerase delta. It ... |
437-748 |
5.62e-07 |
|
DNA polymerase subunit Cdc27; This protein forms the C subunit of DNA polymerase delta. It carries the essential residues for binding to the Pol1 subunit of polymerase alpha, from residues 293-332, which are characterized by the motif D--G--VT, referred to as the DPIM motif. The first 160 residues of the protein form the minimal domain for binding to the B subunit, Cdc1, of polymerase delta, the final 10 C-terminal residues, 362-372, being the DNA sliding clamp, PCNA, binding motif.
Pssm-ID: 462819 [Multi-domain] Cd Length: 427 Bit Score: 52.90 E-value: 5.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 437 PEVPKPTEPRKTVGDKPKAPEPKTAKlaepaksveteIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEP 516
Cdd:pfam09507 123 PIVNPNVKRRSGLGIPPPPPPASPPL-----------ETTAPGKTPPVGKPSAAPETSPAKSEKKKKSAAKSQDASKETT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 517 KPESIKSTEIKPKAPKLKEPEKlaepKPESIKWTEIKPKAPKLKEPEKPAEPKPESiksTEIKPKAPKLKEPEKPAEPKP 596
Cdd:pfam09507 192 PEKAEKAPSVKAPSLKRSPSAK----SNIMSAFFKAKPKNKKKKTSASEQKVQEES---AEESGKEDVTLEDDSAAEEEE 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 597 ESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE----KPAEPKPESIKSTEIKPKAPKLKEPEKPTEd 672
Cdd:pfam09507 265 DEQLPTKKDKRRQKRGESSDSEESTRESRKEKRERLKKMMEDDSDddemEDVPESPVATEEEETGSPPPLLKKEVEKEE- 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 673 kpapIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPKPK 748
Cdd:pfam09507 344 ----VTESGDGRRRKRRKVMKKKTFKDEEGYMVTEKVYEWESFSEDEDEPPVKPKPAVSTPASPAAAKKGKAPKAN 415
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
509-803 |
4.66e-06 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 50.15 E-value: 4.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 509 EPEKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEP 588
Cdd:NF033839 158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKEL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 589 EKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEiKPKAPKLKEPEK 668
Cdd:NF033839 238 DELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQ-PEKKEVKPEPET 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 669 PTEDKpapikstENKPEAPKLQKPKQPTEPKPEsiksTENKPEAPKLQKPKQPTEVKPEV-PKPTEPRKTVGDKPKAPKP 747
Cdd:NF033839 317 PKPEV-------KPQLEKPKPEVKPQPEKPKPE----VKPQLETPKPEVKPQPEKPKPEVkPQPEKPKPEVKPQPETPKP 385
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 748 KTAKLAEPAKSvEFMPKASQLREPVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHKP 803
Cdd:NF033839 386 EVKPQPEKPKP-EVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKP 440
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
386-603 |
3.06e-05 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 47.47 E-value: 3.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 386 KPVKTVNLVVAKaEVPKPKQPTEPKPESIKSTEIK----PKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKapepKTA 461
Cdd:NF040676 169 EEAKTQKVAKAK-ETTKAQEIVKPKEEVKVQEVVKpkeePKVQEIVKPKEEVKVQEEVKPKEEEKVQEIVKPK----EEA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 462 KLAEPAKSVETEIKPKVPKLKEPEKPTEAkpAPIKSTEIKPKAPKLKEPEKPAE--PKPESIKSTEIKpKAPKLKEPEKL 539
Cdd:NF040676 244 KVQEEVKVKEEAKVQEIAKAKEEAKAQEI--AKAKEEAKAQEIAKAKEEAKAQEiaKAKEEEKAQEIA-KAKEEAKAREI 320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 540 AEPKPESiKWTEIKpkapKLKEPEKPAEPKpeSIKSTEIKPKAPKLKEPEKPAEPKPESIKSTE 603
Cdd:NF040676 321 AKAKEEE-KAREIA----KAKEEAKAREIA--KAKEEAKAREIAKAKEEERAKEASKNNIQSAK 377
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
404-629 |
1.30e-04 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 45.54 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 404 KQPTEPKPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKapepKTAKLAEPAKSVETEIKPKVPKLKE 483
Cdd:NF040676 166 KAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQEVVKPKEEPKVQEIVKPK----EEVKVQEEVKPKEEEKVQEIVKPKE 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 484 PEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIkPKAPKLKEPEKLAEPKPESiKWTEIKpkapKLKEPE 563
Cdd:NF040676 242 EAKVQEEVKVKEEAKVQEIAKAKEEAKAQEIAKAKEEAKAQEI-AKAKEEAKAQEIAKAKEEE-KAQEIA----KAKEEA 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831518509 564 KPAE--PKPESIKSTEIKpkapKLKEPEKPAEPKpeSIKSTEIKPKAPKLKEPEKPAEPKPESIKSTE 629
Cdd:NF040676 316 KAREiaKAKEEEKAREIA----KAKEEAKAREIA--KAKEEAKAREIAKAKEEERAKEASKNNIQSAK 377
|
|
| ftsN |
TIGR02223 |
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ... |
513-701 |
1.74e-04 |
|
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 44.30 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 513 PAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESiKWTEIKPKAPKLKEPEKPAEP--KPESIKSTEIKPKAPKLKEPEK 590
Cdd:TIGR02223 48 LTESKQANEPETLQPKNQTENGETAADLPPKPEE-RWSYIEELEAREVLINDPEEPsnGGGVEESAQLTAEQRQLLEQMQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 591 PAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPkapklkePEKPAEPKPESIKSteikpKAPKLKEPEKPT 670
Cdd:TIGR02223 127 ADMRAAEKVLATAPSEQTVAVEARKQTAEKKPQKARTAEAQK-------TPVETEKIASKVKE-----AKQKQKALPKQT 194
|
170 180 190
....*....|....*....|....*....|.
gi 1831518509 671 EDKPAPIKSTENKPEAPKLQKPKQPTEPKPE 701
Cdd:TIGR02223 195 AETQSNSKPIETAPKADKADKTKPKPKEKAE 225
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
352-556 |
4.53e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.60 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 352 ELAKPNTEVSVLAELKKPLEAGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKsteiKPKAPKLQKPKQ 431
Cdd:NF033839 293 SAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKP----QPEKPKPEVKPQ 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 432 PTEVKPEV-PKPTEPRKTVGDKPKAPEPKTAKLAEPAKSvetEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEP 510
Cdd:NF033839 369 PEKPKPEVkPQPETPKPEVKPQPEKPKPEVKPQPEKPKP---EVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ 445
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1831518509 511 EKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKA 556
Cdd:NF033839 446 PEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQA 491
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
352-820 |
9.04e-22 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 101.76 E-value: 9.04e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 352 ELAKPNTEVSVLAELKKPLEAGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQ 431
Cdd:PTZ00121 1221 EDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEE 1300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 432 PTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPApikstEIKPKAPKLK--E 509
Cdd:PTZ00121 1301 KKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA-----EEKAEAAEKKkeE 1375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 510 PEKPAEP----KPESIKSTEIKPKAPKL-KEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPK 584
Cdd:PTZ00121 1376 AKKKADAakkkAEEKKKADEAKKKAEEDkKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEE 1455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 585 LKEPEKPAEPKPESIKSTEIKPKApklKEPEKPAEPKPesiKSTEIKPKAPKLKEPEKpAEPKPESIKSTEIKPKAPKLK 664
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKA---EEAKKADEAKK---KAEEAKKKADEAKKAAE-AKKKADEAKKAEEAKKADEAK 1528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 665 EPEKptEDKPAPIKSTENKPEAPKLQKPKQPTepKPESIKSTEnkpEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKA 744
Cdd:PTZ00121 1529 KAEE--AKKADEAKKAEEKKKADELKKAEELK--KAEEKKKAE---EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLY 1601
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 745 PKPKTAKLAEPAKSVEFMPKASQLREPvkptvVEPEQNLKLLDKPAQPEIAKLDEPHKPTEEVLERCKALDKLWEQ 820
Cdd:PTZ00121 1602 EEEKKMKAEEAKKAEEAKIKAEELKKA-----EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEE 1672
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
348-784 |
5.77e-18 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 89.43 E-value: 5.77e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 348 RNAVELAKPNTEVSVLAELKKPLEAGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQ 427
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 428 KPKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKtaKLAEPAKSVETEIKPKV---PKLKEPEKPTEAKPA-PIKSTEIKPK 503
Cdd:PTZ00121 1458 KAEEAKKKAEEAKKADEAKKKAEEAKKADEAK--KKAEEAKKKADEAKKAAeakKKADEAKKAEEAKKAdEAKKAEEAKK 1535
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 504 APKLKEPEKpaEPKPESIKSTEIKPKApklKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAP 583
Cdd:PTZ00121 1536 ADEAKKAEE--KKKADELKKAEELKKA---EEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAE 1610
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 584 KLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPesiKSTEIKpkapkl 663
Cdd:PTZ00121 1611 EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKK---KAEEAK------ 1681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 664 KEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTE--NKPEAPKLQKPKQPTEVKPEVPKPTEPRKtvgDK 741
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEeeNKIKAEEAKKEAEEDKKKAEEAKKDEEEK---KK 1758
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1831518509 742 PKAPKPKTAKLAEPAKSVEFMPKASQLREPVKPTVVEPEQNLK 784
Cdd:PTZ00121 1759 IAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIK 1801
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
369-759 |
1.55e-16 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 84.99 E-value: 1.55e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 369 PLEAGPKLPD-ALEPEIPKPVKTVNLVVAKAEVPK-PKQPTEPK---------PESIKSTEIKPKAPKLQKP-----KQP 432
Cdd:PHA03247 2556 PPAAPPAAPDrSVPPPRPAPRPSEPAVTSRARRPDaPPQSARPRapvddrgdpRGPAPPSPLPPDTHAPDPPppspsPAA 2635
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 433 TEVKPEVPKPTEPRKTVGDKPKAPEP----KTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLK 508
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGRVsrprRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHAL 2715
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 509 EPEKPAEPKPESIKSTEIKPKApklkEPEKLAEPKPESIKWTEIKPKAPKLkePEKPAEPKPESIKSTEIKPKAPklKEP 588
Cdd:PHA03247 2716 VSATPLPPGPAAARQASPALPA----APAPPAVPAGPATPGGPARPARPPT--TAGPPAPAPPAAPAAGPPRRLT--RPA 2787
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 589 EKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIK-STEIKPKAPKLKepe 667
Cdd:PHA03247 2788 VASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPlGGSVAPGGDVRR--- 2864
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 668 KPTEDKPAPIKSTENKPEAPKLQKP--KQPTEPKPESIKSTENKPEAPKLQKPK-QPTEVKPEVPKPTEPRKTVGDKPKA 744
Cdd:PHA03247 2865 RPPSRSPAAKPAAPARPPVRRLARPavSRSTESFALPPDQPERPPQPQAPPPPQpQPQPPPPPQPQPPPPPPPRPQPPLA 2944
|
410
....*....|....*
gi 1831518509 745 PKPKTAKLAEPAKSV 759
Cdd:PHA03247 2945 PTTDPAGAGEPSGAV 2959
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
416-748 |
7.72e-15 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 78.96 E-value: 7.72e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 416 STEIKpKAPKLQKPKQPTEVKPEVPKPTEPRK---TVGDKPKAPEPKTA--KLAEPAKSVETEIKPKVPK-------LKE 483
Cdd:PTZ00449 482 TQEIK-KLIKKSKKKLAPIEEEDSDKHDEPPEgpeASGLPPKAPGDKEGeeGEHEDSKESDEPKEGGKPGetkegevGKK 560
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 484 PEKPTEAKPAPIKSTEIKPKAPK----LKEPEKPAEPKPESIKSTEIKPKAPKLkePEKLAEPKPESIKWTEIKPKAPkl 559
Cdd:PTZ00449 561 PGPAKEHKPSKIPTLSKKPEFPKdpkhPKDPEEPKKPKRPRSAQRPTRPKSPKL--PELLDIPKSPKRPESPKSPKRP-- 636
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 560 KEPEKPAEP-KPESIKSTEiKPKAPklKEPEKPAEPKPESIKSTEIKPKAPKLKEpEKPAEPKPESIKSTEIKPKAPKLK 638
Cdd:PTZ00449 637 PPPQRPSSPeRPEGPKIIK-SPKPP--KSPKPPFDPKFKEKFYDDYLDAAAKSKE-TKTTVVLDESFESILKETLPETPG 712
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 639 EPEKPAEPKPESIKSTEIKPKAPklkePEKPTEDKPAPI--------KSTENKPEAPKLQKPKQPTEP-KPESIKSTENK 709
Cdd:PTZ00449 713 TPFTTPRPLPPKLPRDEEFPFEP----IGDPDAEQPDDIefftppeeERTFFHETPADTPLPDILAEEfKEEDIHAETGE 788
|
330 340 350
....*....|....*....|....*....|....*....
gi 1831518509 710 PEAPkLQKPKQPTEVKPEVPkpteprktvGDKPKAPKPK 748
Cdd:PTZ00449 789 PDEA-MKRPDSPSEHEDKPP---------GDHPSLPKKR 817
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
354-805 |
3.53e-14 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 77.29 E-value: 3.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 354 AKPNTEVSVLAELKKPLEAGPKLPD--ALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQ 431
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSPLPPDthAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQ 2675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 432 PTEvKPEVPKPTEPRKTVGD-----KPKAPEPKTAKLAEPAKS-VETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAP 505
Cdd:PHA03247 2676 ASS-PPQRPRRRAARPTVGSltslaDPPPPPPTPEPAPHALVSaTPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGP 2754
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 506 KlkepeKPAEPKPESIKSTEIKPKAPKLKEPEKLaePKPESIKWTEIKPKAPKLKEPEKPAEPKPesiksteikPKAPKL 585
Cdd:PHA03247 2755 A-----RPARPPTTAGPPAPAPPAAPAAGPPRRL--TRPAVASLSESRESLPSPWDPADPPAAVL---------APAAAL 2818
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 586 KEPEKPAEPKPESIKSTEIKPkaPKLKEPEKPAEPKPESIK-STEIKPKAPKLKEPEKPAEPKPESIKSTEiKPKAPKLK 664
Cdd:PHA03247 2819 PPAASPAGPLPPPTSAQPTAP--PPPPGPPPPSLPLGGSVApGGDVRRRPPSRSPAAKPAAPARPPVRRLA-RPAVSRST 2895
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 665 EPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPEsikstenKPEAPKLQKPKQPTEVKPEVPKPT----EPRKTVGD 740
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPP-------PPPPPRPQPPLAPTTDPAGAGEPSgavpQPWLGALV 2968
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 741 KPKAPKPKTaKLAEPAKSVEF-MPKASQLREPVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHKPTE 805
Cdd:PHA03247 2969 PGRVAVPRF-RVPQPAPSREApASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPPDD 3033
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
286-802 |
9.43e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.95 E-value: 9.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 286 DFDKEMKSLKLERDEKDKGKQQKKKKKVVvtpswgfrsdsyvpSNLEKNREKKNRKKEKRMARNAVELAKpntevsvlAE 365
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTET--------------GKAEEARKAEEAKKKAEDARKAEEARK--------AE 1137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 366 LKKPLEAGPKLPDALEPEIPKPVKTVNlvvaKAEVPKPKQPTEPKPESIKSTEIKpKAPKLQKPKQPTevKPEVPKPTEP 445
Cdd:PTZ00121 1138 DARKAEEARKAEDAKRVEIARKAEDAR----KAEEARKAEDAKKAEAARKAEEVR-KAEELRKAEDAR--KAEAARKAEE 1210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 446 RKTVGDKPKAPEPKTA---KLAEPAKSVETEIKpKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAE-PKPESI 521
Cdd:PTZ00121 1211 ERKAEEARKAEDAKKAeavKKAEEAKKDAEEAK-KAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADElKKAEEK 1289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 522 KSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPE------SIKSTEIKPKAPKLKEPEKPAEpk 595
Cdd:PTZ00121 1290 KKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEeakkaaEAAKAEAEAAADEAEAAEEKAE-- 1367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 596 PESIKSTEIKPKAPKLK----EPEKPAEPKPesiKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPTE 671
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKkkaeEKKKADEAKK---KAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAK 1444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 672 DKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKapKPKTAK 751
Cdd:PTZ00121 1445 KADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAK--KAEEAK 1522
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 752 LAEPAKSVEFMPKASQLR---EPVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHK 802
Cdd:PTZ00121 1523 KADEAKKAEEAKKADEAKkaeEKKKADELKKAEELKKAEEKKKAEEAKKAEEDK 1576
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
347-705 |
9.39e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 69.40 E-value: 9.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 347 ARNAVELAKPNTEVSVLAELKKPLEAGPKLPDAlepeipkpVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKL 426
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEEAKKADEA--------KKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEA 1527
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 427 QKPKQPTEV----KPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKP 502
Cdd:PTZ00121 1528 KKAEEAKKAdeakKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 503 KAPKLKEPEKpaepkpESIKSTEIKPKAPKLKEPEKLAEPKPESIKwteikpKAPKLKEPEKPAEPKPESI--KSTEIKP 580
Cdd:PTZ00121 1608 KAEEAKKAEE------AKIKAEELKKAEEEKKKVEQLKKKEAEEKK------KAEELKKAEEENKIKAAEEakKAEEDKK 1675
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 581 KAPKLKEPEKPAEPKPESI-KSTEIKPKAPKLKEPEKPAEPKPESIKSTE--IKPKAPKLKEPEKPAEPKPESIKSTEIK 657
Cdd:PTZ00121 1676 KAEEAKKAEEDEKKAAEALkKEAEEAKKAEELKKKEAEEKKKAEELKKAEeeNKIKAEEAKKEAEEDKKKAEEAKKDEEE 1755
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1831518509 658 PK--APKLKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKS 705
Cdd:PTZ00121 1756 KKkiAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFD 1805
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
399-803 |
3.05e-11 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 67.41 E-value: 3.05e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 399 EVPKPKQPTEPKPESIKSTEIKPKAPKLQKP-KQPTEVKpevpKPTEPRktvgdKPKAP-EPKTAKLAEPAKSVETEIKP 476
Cdd:PTZ00449 539 ESDEPKEGGKPGETKEGEVGKKPGPAKEHKPsKIPTLSK----KPEFPK-----DPKHPkDPEEPKKPKRPRSAQRPTRP 609
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 477 KVPKLKEPEKPTEAKPAPIKSTEikPKAPklKEPEKPAEP-KPESIKSTEiKPKAPklKEPEKLAEPKPESIKWTEIKPK 555
Cdd:PTZ00449 610 KSPKLPELLDIPKSPKRPESPKS--PKRP--PPPQRPSSPeRPEGPKIIK-SPKPP--KSPKPPFDPKFKEKFYDDYLDA 682
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 556 APKLKEPEKPA--EPKPESIKSTEIKPKAPKLKEPEKPAEPK-PESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKP 632
Cdd:PTZ00449 683 AAKSKETKTTVvlDESFESILKETLPETPGTPFTTPRPLPPKlPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHE 762
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 633 KAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPapiKSTENKPEAPKLQKPKQPTepkpeSIKSTENKPEA 712
Cdd:PTZ00449 763 TPADTPLPDILAEEFKEEDIHAETGEPDEAMKRPDSPSEHED---KPPGDHPSLPKKRHRLDGL-----ALSTTDLESDA 834
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 713 PKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPkPKTAKLAEPAKSVEFMPKASQLREPVKPTVVEPEQNLKLLDKPAQP 792
Cdd:PTZ00449 835 GRIAKDASGKIVKLKRSKSFDDLTTVEEAEEMG-AEARKIVVDDDGTEADDEDTHPPEEKHKSEVRRRRPPKKPSKPKKP 913
|
410
....*....|.
gi 1831518509 793 eiAKLDEPHKP 803
Cdd:PTZ00449 914 --SKPKKPKKP 922
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
428-796 |
1.51e-10 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 64.65 E-value: 1.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 428 KPKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKP-----------KVPKLKEPEKPTEAKPAPIK 496
Cdd:NF033838 112 EAELTSKTKKELDAAFEQFKKDTLEPGKKVAEATKKVEEAEKKAKDQKEedrrnyptntyKTLELEIAESDVEVKKAELE 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 497 STEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKapKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKST 576
Cdd:NF033838 192 LVKEEAKEPRDEEKIKQAKAKVESKKAEATRLE--KIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRRAKRGV 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 577 EIKPKAPKLKE-PEKPAEPKP--ESIKSTEIKPKApKLKEPEKpaepkpesiKSTEIKPKAPKLKEPEKPAEPKPE---- 649
Cdd:NF033838 270 LGEPATPDKKEnDAKSSDSSVgeETLPSPSLKPEK-KVAEAEK---------KVEEAKKKAKDQKEEDRRNYPTNTyktl 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 650 --SIKSTEIKPKAPKL-------KEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIK---STENKPEAPKLQK 717
Cdd:NF033838 340 elEIAESDVKVKEAELelvkeeaKEPRNEEKIKQAKAKVESKKAEATRLEKIKTDRKKAEEEAKrkaAEEDKVKEKPAEQ 419
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831518509 718 PKQPTEVKPEVPKPTEPRKTVGDKPKAPKPKTAKLAEPAKSVEFMPKASQlREPVKPtvvepeqnlkllDKPAQPEIAK 796
Cdd:NF033838 420 PQPAPAPQPEKPAPKPEKPAEQPKAEKPADQQAEEDYARRSEEEYNRLTQ-QQPPKT------------EKPAQPSTPK 485
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
409-793 |
1.88e-10 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 64.96 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 409 PKPESIKSTEIKPKAPKLQKPkqPTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPK-------L 481
Cdd:PHA03247 2463 PFSLSLLLGELFPGAPVYRRP--AEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgL 2540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 482 KEPEKPTEAKPAPiksteikpkapklkePEKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKlke 561
Cdd:PHA03247 2541 EELASDDAGDPPP---------------PLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPV--- 2602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 562 peKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPe 641
Cdd:PHA03247 2603 --DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSP- 2679
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 642 kPAEPKPESIKSTeIKPKAPKLKEPEKPTEDKPAPIKSTENKPEAPKLQK-----PKQPTEPKPESIKSTENKPEAPKlQ 716
Cdd:PHA03247 2680 -PQRPRRRAARPT-VGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAarqasPALPAAPAPPAVPAGPATPGGPA-R 2756
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831518509 717 KPKQPTEVKPevPKPTEPRKTV-GDKPKAPKPKTAKLAEPAKSVEFMPKASQLREPVKPtvvePEQNLKLLDKPAQPE 793
Cdd:PHA03247 2757 PARPPTTAGP--PAPAPPAAPAaGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLA----PAAALPPAASPAGPL 2828
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
399-766 |
2.56e-10 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 64.02 E-value: 2.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 399 EVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQPTE-VKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPK 477
Cdd:NF033839 165 ENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEkAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKELDELKKQA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 478 VPKLKEPEKPTEAKPAPIKS-TEIKPKAPKLKEPEKPAEPKPESIKSTEI-KPKAPKLKEPEKLAEPKPESIKWTEIKPK 555
Cdd:NF033839 245 LSEIDNVNTKVEIENTVHKIfADMDAVVTKFKKGLTQDTPKEPGNKKPSApKPGMQPSPQPEKKEVKPEPETPKPEVKPQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 556 APKLKEPEKPAEPKPESikSTEIKPKAPKLKEPEKPAEPKPEsiksTEIKPKAPKLKEPEKPAEPKPESIKSTEiKPKAP 635
Cdd:NF033839 325 LEKPKPEVKPQPEKPKP--EVKPQLETPKPEVKPQPEKPKPE----VKPQPEKPKPEVKPQPETPKPEVKPQPE-KPKPE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 636 KLKEPEKP---AEPKPESIKStEIKPKAPKLKEPEKPTEDKPAPIKSTEnkPEAPKLQKPKQPTEPKPESikstenkpeA 712
Cdd:NF033839 398 VKPQPEKPkpeVKPQPEKPKP-EVKPQPEKPKPEVKPQPEKPKPEVKPQ--PEKPKPEVKPQPETPKPEV---------K 465
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 713 PKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPKPKTAKLAEPAKSVEFMPKAS 766
Cdd:NF033839 466 PQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSNQASTNEKAT 519
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
396-699 |
7.14e-10 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 62.72 E-value: 7.14e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 396 AKAEVPKPKQPTEPKPESIKSTEIKPKApKLQKPKQPTEVKPEVPKP-TEPRKTVGDKPKAPEPKTAKLAEPAKSVETEI 474
Cdd:NF033838 216 KKAEATRLEKIKTDREKAEEEAKRRADA-KLKEAVEKNVATSEQDKPkRRAKRGVLGEPATPDKKENDAKSSDSSVGEET 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 475 KPKvPKLKEPEKPTEAKPapiKSTEIKPKAPKLKEPEKPAEPKpESIKSTEIKPKAPKLKEPEKLAEPKPEsikwteiKP 554
Cdd:NF033838 295 LPS-PSLKPEKKVAEAEK---KVEEAKKKAKDQKEEDRRNYPT-NTYKTLELEIAESDVKVKEAELELVKE-------EA 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 555 KAPKLKEPEKPAEPKPESIKSteIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPEsiksteiKPkA 634
Cdd:NF033838 363 KEPRNEEKIKQAKAKVESKKA--EATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKPAEQPQPAPAPQPE-------KP-A 432
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1831518509 635 PKlkePEKPAE-PKPEsiksteiKPKAPKLKEPE-KPTEDKPAPIksTENKPeaPKLQKPKQPTEPK 699
Cdd:NF033838 433 PK---PEKPAEqPKAE-------KPADQQAEEDYaRRSEEEYNRL--TQQQP--PKTEKPAQPSTPK 485
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
355-730 |
1.12e-08 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 58.87 E-value: 1.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 355 KPNTEVSVLAELKKPLEAGPKL--PDALEPE--IPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPK 430
Cdd:NF033838 108 KEKSEAELTSKTKKELDAAFEQfkKDTLEPGkkVAEATKKVEEAEKKAKDQKEEDRRNYPTNTYKTLELEIAESDVEVKK 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 431 QPTE-VKPEVPKPTEPRKTVGDKPKAPEPKT-AKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKA-PKL 507
Cdd:NF033838 188 AELElVKEEAKEPRDEEKIKQAKAKVESKKAeATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQDKPKRrAKR 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 508 KEPEKPAEP--KPESIKST-----EIKPKAPKLKEPEKLAEPKPesiKWTEIKPKAPKLKEPEKPAEPKpESIKSTEIKP 580
Cdd:NF033838 268 GVLGEPATPdkKENDAKSSdssvgEETLPSPSLKPEKKVAEAEK---KVEEAKKKAKDQKEEDRRNYPT-NTYKTLELEI 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 581 KAPKLKEPEKPAEPKPESIKST--EIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEpeKPAEPKPESIKSTEIKP 658
Cdd:NF033838 344 AESDVKVKEAELELVKEEAKEPrnEEKIKQAKAKVESKKAEATRLEKIKTDRKKAEEEAKR--KAAEEDKVKEKPAEQPQ 421
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1831518509 659 KAPKlkepekPTEDKPAPikSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPK 730
Cdd:NF033838 422 PAPA------PQPEKPAP--KPEKPAEQPKAEKPADQQAEEDYARRSEEEYNRLTQQQPPKTEKPAQPSTPK 485
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
393-670 |
3.40e-08 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 57.24 E-value: 3.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 393 LVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPklqkpkqpteVKPEVPKPTEPRKTVgdkPKAPEPKTAKlaEPAKSVET 472
Cdd:PLN03209 302 VVEVIAETTAPLTPMEELLAKIPSQRVPPKES----------DAADGPKPVPTKPVT---PEAPSPPIEE--EPPQPKAV 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 473 EIKPKVP-----KLKEPEKPTeakpaPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIK-PKAPKLKEPEKLAEPKPES 546
Cdd:PLN03209 367 VPRPLSPytayeDLKPPTSPI-----PTPPSSSPASSKSVDAVAKPAEPDVVPSPGSASNvPEVEPAQVEAKKTRPLSPY 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 547 IKWTEIKPKAPKLKEPEKPAEPkpeSIKSTEIKPKAPKLKEPEKPAEPK-PESIKSTEIKPKA--PKLKEPEKPAEPKPE 623
Cdd:PLN03209 442 ARYEDLKPPTSPSPTAPTGVSP---SVSSTSSVPAVPDTAPATAATDAAaPPPANMRPLSPYAvyDDLKPPTSPSPAAPV 518
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1831518509 624 SIKSTEIKPKAPKLKEPEKPAEPKPE-SIKSTEIKPKAP-----KLKEPEKPT 670
Cdd:PLN03209 519 GKVAPSSTNEVVKVGNSAPPTALADEqHHAQPKPRPLSPytmyeDLKPPTSPT 571
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
461-708 |
4.24e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 57.03 E-value: 4.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 461 AKLAEPAKSVETEIKPKVPKLKEPEKPTEA-KPAPIksteikpkapklkePEKPAEPKPESIKSTEIKPKAPKLKEPEKL 539
Cdd:PRK08691 362 AAASCDANAVIENTELQSPSAQTAEKETAAkKPQPR--------------PEAETAQTPVQTASAAAMPSEGKTAGPVSN 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 540 AEPkpesikwTEIKPKAPKLKEPEKPAEPKPESIKSTEikpkapKLKEPEKPAEPKPESIKSTEIKPKAPKLKEP-EKPA 618
Cdd:PRK08691 428 QEN-------NDVPPWEDAPDEAQTAAGTAQTSAKSIQ------TASEAETPPENQVSKNKAADNETDAPLSEVPsENPI 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 619 EPKPESiksteiKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKS---TENKPEAPKLQKPKQP 695
Cdd:PRK08691 495 QATPND------EAVETETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTAgggADEEAEAGGIGGNNTP 568
|
250
....*....|...
gi 1831518509 696 TEPKPESikSTEN 708
Cdd:PRK08691 569 SAPPPEF--STEN 579
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
475-749 |
4.44e-08 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 56.98 E-value: 4.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 475 KPKVPKLKEPEKPTEAKPAPIKSTEIK----PKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESikwt 550
Cdd:PTZ00108 1101 KEKVEKLNAELEKKEKELEKLKNTTPKdmwlEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKK---- 1176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 551 eikpKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKaPKLKEPEKPAEPKPESIKSTEI 630
Cdd:PTZ00108 1177 ----KEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDE-EQKTKPKKSSVKRLKSKKNNSS 1251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 631 KPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEpkpeSIKSTENKP 710
Cdd:PTZ00108 1252 KSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSL----AALKKKKKS 1327
|
250 260 270
....*....|....*....|....*....|....*....
gi 1831518509 711 EAPKLQKPKQPTEVKpevPKPTEPRKTVGDKPKAPKPKT 749
Cdd:PTZ00108 1328 EKKTARKKKSKTRVK---QASASQSSRLLRRPRKKKSDS 1363
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
563-783 |
7.63e-08 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 56.25 E-value: 7.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 563 EKPAEPKPESIKSTEIKPKapKLKEPEKPAEPKpesiksteIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEK 642
Cdd:PRK10263 714 EQPAGANPFSLDDFEFSPM--KALLDDGPHEPL--------FTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQ 783
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 643 PAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPES-------IKSTENKPeapkL 715
Cdd:PRK10263 784 PVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDtllhpllMRNGDSRP----L 859
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831518509 716 QKPKQPTevkPEVPKPTEPRKTVGDKPKAPKPKTAKLAEpAKSVEFMPKASQLREPVKPTVVEPEQNL 783
Cdd:PRK10263 860 HKPTTPL---PSLDLLTPPPSEVEPVDTFALEQMARLVE-ARLADFRIKADVVNYSPGPVITRFELNL 923
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
472-734 |
1.98e-07 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 54.55 E-value: 1.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 472 TEIKPKVPKLKEPEKPTEAKPAPIKSTEikPKAPKLKEPEKPaePKPESIKSTEIKPKAP--KLKEPEKlaepkPESIKW 549
Cdd:PLN03209 321 AKIPSQRVPPKESDAADGPKPVPTKPVT--PEAPSPPIEEEP--PQPKAVVPRPLSPYTAyeDLKPPTS-----PIPTPP 391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 550 TEIKPKAPKLKEPEKPAEPKPESIKSTEIK-PKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPkpeSIKST 628
Cdd:PLN03209 392 SSSPASSKSVDAVAKPAEPDVVPSPGSASNvPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSP---SVSST 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 629 EIKPKAPKLKEPEKPAEPK-PESIKSTEIKPKA--PKLKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESiKS 705
Cdd:PLN03209 469 SSVPAVPDTAPATAATDAAaPPPANMRPLSPYAvyDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQ-HH 547
|
250 260
....*....|....*....|....*....
gi 1831518509 706 TENKPeapklqKPKQPTEVKPEVPKPTEP 734
Cdd:PLN03209 548 AQPKP------RPLSPYTMYEDLKPPTSP 570
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
506-754 |
2.40e-07 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 54.67 E-value: 2.40e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 506 KLKEPEKPAEPKPESIKSTEikPKAPKLKEPEKLAEPKPESIKWTEIKPKapklkEPEKPAEPKPESIKSTEIKP---KA 582
Cdd:PTZ00108 1106 KLNAELEKKEKELEKLKNTT--PKDMWLEDLDKFEEALEEQEEVEEKEIA-----KEQRLKSKTKGKASKLRKPKlkkKE 1178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 583 PKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKaPKLKEPEKPAEPKPESIKSTEIKPKAPK 662
Cdd:PTZ00108 1179 KKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDE-EQKTKPKKSSVKRLKSKKNNSSKSSEDN 1257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 663 LKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTE----PRKTV 738
Cdd:PTZ00108 1258 DEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEkktaRKKKS 1337
|
250 260
....*....|....*....|....*.
gi 1831518509 739 GDKPK----------APKPKTAKLAE 754
Cdd:PTZ00108 1338 KTRVKqasasqssrlLRRPRKKKSDS 1363
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
377-806 |
2.83e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 53.91 E-value: 2.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 377 PDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPK-- 454
Cdd:COG5180 20 NAARPVLSPELWAAANNDAVSQGDRSALASSPTRPYARKIFEPLDIKLALGKPQLPSVAEPEAYLDPAPPKSSPDTPEeq 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 455 ----APEPKTAKLAEPAKSVETEIKPKVPKLKEPeKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKP------------ 518
Cdd:COG5180 100 lgapAGDLLVLPAAKTPELAAGALPAPAAAAALP-KAKVTREATSASAGVALAAALLQRSDPILAKDPdgdsastlpppa 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 519 ESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKA----PKLKEPE---KPAEPKPESIKSTEIKPKAPKLKEPEKP 591
Cdd:COG5180 179 EKLDKVLTEPRDALKDSPEKLDRPKVEVKDEAQEEPPDltggADHPRPEaasSPKVDPPSTSEARSRPATVDAQPEMRPP 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 592 AEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKE-PEKPAEPKPESIKSTEIKPKAPKLKEPEKPT 670
Cdd:COG5180 259 ADAKERRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARPIDVKGvASAPPATRPVRPPGGARDPGTPRPGQPTERP 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 671 EDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKS--------TENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKp 742
Cdd:COG5180 339 AGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRpgssggdgAPFQPPNGAPQPGLGRRGAPGPPMGAGDLVQAALDG- 417
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 743 kaPKPKTAKLAEPAKSVEFMPKAsqlrEPVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHKPTEE 806
Cdd:COG5180 418 --GGRETASLGGAAGGAGQGPKA----DFVPGDAESVSGPAGLADQAGAAASTAMADFVAPVTD 475
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
367-750 |
3.12e-07 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 54.31 E-value: 3.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 367 KKPleAGPKlpDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKlqKPKQPtevkpevPKPTEPr 446
Cdd:PTZ00449 577 KKP--EFPK--DPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPK--SPKRP-------PPPQRP- 642
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 447 ktvgDKPKAPE-PKTAKLAEPAKSVETeikPKVPKLKEPEKPTEAKPApiksteikPKAPKLKEPEKPAEPKPESIKSTE 525
Cdd:PTZ00449 643 ----SSPERPEgPKIIKSPKPPKSPKP---PFDPKFKEKFYDDYLDAA--------AKSKETKTTVVLDESFESILKETL 707
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 526 IKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIK 605
Cdd:PTZ00449 708 PETPGTPFTTPRPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETG 787
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 606 PKAPKLKEPEKPAEPKPesiKSTEIKPKAPKlkepeKPAEPKPESIKSTEIKPKAPKLKepeKPTEDKPAPIKSTENKPE 685
Cdd:PTZ00449 788 EPDEAMKRPDSPSEHED---KPPGDHPSLPK-----KRHRLDGLALSTTDLESDAGRIA---KDASGKIVKLKRSKSFDD 856
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 686 APKLQKpKQPTEPKPESI----KSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAP-KPKTA 750
Cdd:PTZ00449 857 LTTVEE-AEEMGAEARKIvvddDGTEADDEDTHPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPkKPDSA 925
|
|
| CDC27 |
pfam09507 |
DNA polymerase subunit Cdc27; This protein forms the C subunit of DNA polymerase delta. It ... |
437-748 |
5.62e-07 |
|
DNA polymerase subunit Cdc27; This protein forms the C subunit of DNA polymerase delta. It carries the essential residues for binding to the Pol1 subunit of polymerase alpha, from residues 293-332, which are characterized by the motif D--G--VT, referred to as the DPIM motif. The first 160 residues of the protein form the minimal domain for binding to the B subunit, Cdc1, of polymerase delta, the final 10 C-terminal residues, 362-372, being the DNA sliding clamp, PCNA, binding motif.
Pssm-ID: 462819 [Multi-domain] Cd Length: 427 Bit Score: 52.90 E-value: 5.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 437 PEVPKPTEPRKTVGDKPKAPEPKTAKlaepaksveteIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEP 516
Cdd:pfam09507 123 PIVNPNVKRRSGLGIPPPPPPASPPL-----------ETTAPGKTPPVGKPSAAPETSPAKSEKKKKSAAKSQDASKETT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 517 KPESIKSTEIKPKAPKLKEPEKlaepKPESIKWTEIKPKAPKLKEPEKPAEPKPESiksTEIKPKAPKLKEPEKPAEPKP 596
Cdd:pfam09507 192 PEKAEKAPSVKAPSLKRSPSAK----SNIMSAFFKAKPKNKKKKTSASEQKVQEES---AEESGKEDVTLEDDSAAEEEE 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 597 ESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE----KPAEPKPESIKSTEIKPKAPKLKEPEKPTEd 672
Cdd:pfam09507 265 DEQLPTKKDKRRQKRGESSDSEESTRESRKEKRERLKKMMEDDSDddemEDVPESPVATEEEETGSPPPLLKKEVEKEE- 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 673 kpapIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPKPK 748
Cdd:pfam09507 344 ----VTESGDGRRRKRRKVMKKKTFKDEEGYMVTEKVYEWESFSEDEDEPPVKPKPAVSTPASPAAAKKGKAPKAN 415
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
631-802 |
1.59e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 52.00 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 631 KPKAPKLKE--PEKPAEPkPESIKSTEIKPKAP-------KLKEPEKPTeDKPAPIKSTENKPEAPKLQKPKQPTEPKPE 701
Cdd:PTZ00449 493 KKKLAPIEEedSDKHDEP-PEGPEASGLPPKAPgdkegeeGEHEDSKES-DEPKEGGKPGETKEGEVGKKPGPAKEHKPS 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 702 SIKSTENKPEAPKlqKPKQPTevKPEVPKPTEPRKTVGDKPKAPKPKTAKLAEPAKSVEFMPKASQLREPVKPT-VVEPE 780
Cdd:PTZ00449 571 KIPTLSKKPEFPK--DPKHPK--DPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQrPSSPE 646
|
170 180
....*....|....*....|..
gi 1831518509 781 qnlklldKPAQPEIAKLDEPHK 802
Cdd:PTZ00449 647 -------RPEGPKIIKSPKPPK 661
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
414-731 |
2.13e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 51.25 E-value: 2.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 414 IKSTEIKpkAPKLQKPKQPTEVKPEVPKPTE-----PRKTVGDKPKAPEPKTaklAEPAKSVETEIKPkvPKLKEPEKPT 488
Cdd:PRK08691 372 IENTELQ--SPSAQTAEKETAAKKPQPRPEAetaqtPVQTASAAAMPSEGKT---AGPVSNQENNDVP--PWEDAPDEAQ 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 489 EAK-PAPIKSTEIKPKApklkEPEKPAEPKPESIKSTEIKPKAPKLKEPEK---LAEPKPESIKWTEIKPKAPKLKEPEK 564
Cdd:PRK08691 445 TAAgTAQTSAKSIQTAS----EAETPPENQVSKNKAADNETDAPLSEVPSEnpiQATPNDEAVETETFAHEAPAEPFYGY 520
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 565 PAEPKPESIKSTEIKPKApklkePEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESikSTE-----IKPKAPKLKE 639
Cdd:PRK08691 521 GFPDNDCPPEDGAEIPPP-----DWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPPEF--STEnwaaiVRHFARKLGA 593
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 640 PEKPAE----------------PKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEA----PKLQKPKQPTEPK 699
Cdd:PRK08691 594 AQMPAQhsawteyhpdtglmvlAMTAEARATADKKRLDKIRDTLAQAYGLQLTLQTQDWRDEAgretPAMQDKRVQAEDR 673
|
330 340 350
....*....|....*....|....*....|....*.
gi 1831518509 700 PESIKSTENKPEAPKLQKP----KQPTEVKPEVPKP 731
Cdd:PRK08691 674 QKAQALLEADPAAQKILQAfgaqWQPESLELAANRP 709
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
382-739 |
3.68e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.94 E-value: 3.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 382 PEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESikSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTA 461
Cdd:PHA03307 44 VSDSAELAAVTVVAGAAACDRFEPPTGPPPGP--GTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTP 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 462 KLAEPAKSVeteikpkVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTeiKPKAPKLKEPEKLAE 541
Cdd:PHA03307 122 PPASPPPSP-------APDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLS--SPEETARAPSSPPAE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 542 PKPEsikwteikpKAPKLKEPEKPAEPKPESIKSTEIKPKAPklKEPEKPAEPKPESIKSTEI------------KPKAP 609
Cdd:PHA03307 193 PPPS---------TPPAAASPRPPRRSSPISASASSPAPAPG--RSAADDAGASSSDSSSSESsgcgwgpenecpLPRPA 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 610 KLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEAPKL 689
Cdd:PHA03307 262 PITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAV 341
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1831518509 690 QKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVG 739
Cdd:PHA03307 342 SPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR 391
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
509-803 |
4.66e-06 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 50.15 E-value: 4.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 509 EPEKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEP 588
Cdd:NF033839 158 KPETPQPENPEHQKPTTPAPDTKPSPQPEGKKPSVPDINQEKEKAKLAVATYMSKILDDIQKHHLQKEKHRQIVALIKEL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 589 EKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEiKPKAPKLKEPEK 668
Cdd:NF033839 238 DELKKQALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQ-PEKKEVKPEPET 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 669 PTEDKpapikstENKPEAPKLQKPKQPTEPKPEsiksTENKPEAPKLQKPKQPTEVKPEV-PKPTEPRKTVGDKPKAPKP 747
Cdd:NF033839 317 PKPEV-------KPQLEKPKPEVKPQPEKPKPE----VKPQLETPKPEVKPQPEKPKPEVkPQPEKPKPEVKPQPETPKP 385
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 748 KTAKLAEPAKSvEFMPKASQLREPVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHKP 803
Cdd:NF033839 386 EVKPQPEKPKP-EVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKP 440
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
511-649 |
5.84e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 50.08 E-value: 5.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 511 EKPAEPKPESIKSTEIKPKapklkepEKLAEPKPESIKWTeikPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEK 590
Cdd:PRK10263 714 EQPAGANPFSLDDFEFSPM-------KALLDDGPHEPLFT---PIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQ 783
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1831518509 591 PAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPE 649
Cdd:PRK10263 784 PVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQ 842
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
398-557 |
6.62e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 49.86 E-value: 6.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 398 AEVPKPKQPTEP---KPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVG--------------DKPKAPEPKT 460
Cdd:PRK07994 366 PEPEVPPQSAAPaasAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQllaarqqlqraqgaTKAKKSEPAA 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 461 AKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPikstEIKPKAPKLKEPEKPAEPKpesikstEIKPKAPKLKEPE--- 537
Cdd:PRK07994 446 ASRARPVNSALERLASVRPAPSALEKAPAKKEAY----RWKATNPVEVKKEPVATPK-------ALKKALEHEKTPElaa 514
|
170 180
....*....|....*....|
gi 1831518509 538 KLAEPKPESIKWTEIKPKAP 557
Cdd:PRK07994 515 KLAAEAIERDPWAALVSQLG 534
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
396-789 |
8.28e-06 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 49.70 E-value: 8.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 396 AKAEVPKPKQPTEPKPESIKSTEIKPkAPKLQKPKQPTEVKPE----VPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVE 471
Cdd:PRK10263 337 VEPVTQTPPVASVDVPPAQPTVAWQP-VPGPQTGEPVIAPAPEgypqQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQP 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 472 TEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPklKEPEKPAEPKP-ESIKSTEIKP-------KAPKLKEPEKLAEPK 543
Cdd:PRK10263 416 AQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQA--EEQQSTFAPQStYQTEQTYQQPaaqeplyQQPQPVEQQPVVEPE 493
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 544 PESikwTEIKPKAPKL-----------KEPEKPA---EPKPESIKSTE-IKPKAPKLKEPEKP-------AEPKPESIKS 601
Cdd:PRK10263 494 PVV---EETKPARPPLyyfeeveekraREREQLAawyQPIPEPVKEPEpIKSSLKAPSVAAVPpveaaaaVSPLASGVKK 570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 602 TEIKPKA------------------PKLKEPEKPAEPKPESIK--------STEIKPKAPKLKEP--------------- 640
Cdd:PRK10263 571 ATLATGAaatvaapvfslansggprPQVKEGIGPQLPRPKRIRvptrrelaSYGIKLPSQRAAEEkareaqrnqydsgdq 650
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 641 ---------------------------------------------------------------EKPAEPKPESIKSTEIK 657
Cdd:PRK10263 651 ynddeidamqqdelarqfaqtqqqrygeqyqhdvpvnaedadaaaeaelarqfaqtqqqrysgEQPAGANPFSLDDFEFS 730
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 658 PKAPKLKE------------PEKPTEDKPAPIKSTE--NKPEAP--KLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQP 721
Cdd:PRK10263 731 PMKALLDDgpheplftpivePVQQPQQPVAPQQQYQqpQQPVAPqpQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQP 810
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 722 TEVKPEVPKPTEPrktVGDKPKAPKPKTAKLAEPAKSV--EFMPKASQLREPVKPTVvePEQNLKLLDKP 789
Cdd:PRK10263 811 VAPQPQYQQPQQP---VAPQPQYQQPQQPVAPQPQDTLlhPLLMRNGDSRPLHKPTT--PLPSLDLLTPP 875
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
589-758 |
9.84e-06 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 48.82 E-value: 9.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 589 EKPAEPKPESIKSTEIKPKApKLKEPEKPAEP-KPESIKsteikpKAPKLKEPEKPAEPKPESIKSTEIK--PKAPKLKE 665
Cdd:PRK13108 293 DEALEREPAELAAAAVASAA-SAVGPVGPGEPnQPDDVA------EAVKAEVAEVTDEVAAESVVQVADRdgESTPAVEE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 666 PEKPTEDKPAPIKSTENKPEAPKlqkpkqptepkpESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPrktvgdKPKAP 745
Cdd:PRK13108 366 TSEADIEREQPGDLAGQAPAAHQ------------VDAEAASAAPEEPAALASEAHDETEPEVPEKAAP------IPDPA 427
|
170
....*....|...
gi 1831518509 746 KPKTAKLAEPAKS 758
Cdd:PRK13108 428 KPDELAVAGPGDD 440
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
372-702 |
9.93e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 9.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 372 AGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKsteikPKAPKLQKPkqPTEVKPEVPK-PTEPRKTVG 450
Cdd:PHA03247 2814 PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVA-----PGGDVRRRP--PSRSPAAKPAaPARPPVRRL 2886
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 451 DKPkAPEPKTAKLAEPAKSVETEIKPKVPK--LKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESiksteikp 528
Cdd:PHA03247 2887 ARP-AVSRSTESFALPPDQPERPPQPQAPPppQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSG-------- 2957
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 529 kapklkepeklAEPKPESIKWTEIKPKAPKLKEPEkPAEPKPESIKSTeikpkapklkepekpaePKPESIKSTEIKPKA 608
Cdd:PHA03247 2958 -----------AVPQPWLGALVPGRVAVPRFRVPQ-PAPSREAPASST-----------------PPLTGHSLSRVSSWA 3008
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 609 PKLKEPEKPAePKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPklkEPEKPTEDKPAPiksteNKPEAPK 688
Cdd:PHA03247 3009 SSLALHEETD-PPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLPP---EPHDPFAHEPDP-----ATPEAGA 3079
|
330
....*....|....
gi 1831518509 689 LQKPKQPTEPKPES 702
Cdd:PHA03247 3080 RESPSSQFGPPPLS 3093
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
588-804 |
1.06e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 49.15 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 588 PEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPesiksteIKPKAPKLKEPEKPaePKPESIKSTEIKPKAP--KLKE 665
Cdd:PLN03209 312 PLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKP-------VTPEAPSPPIEEEP--PQPKAVVPRPLSPYTAyeDLKP 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 666 PEKPTedkpaPIKSTENKPEAPKLQKPKQPTEPK-------PESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTV 738
Cdd:PLN03209 383 PTSPI-----PTPPSSSPASSKSVDAVAKPAEPDvvpspgsASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTA 457
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1831518509 739 GDKPKAPKPKTAKL-AEPAKSVEFMPKASQLREPVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHKPT 804
Cdd:PLN03209 458 PTGVSPSVSSTSSVpAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPS 524
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
480-708 |
2.96e-05 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 47.73 E-value: 2.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 480 KLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKL 559
Cdd:PTZ00108 1136 KFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDN 1215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 560 KEPEKPAEPKPESI--KSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKP-------AEPKPESIKSTEI 630
Cdd:PTZ00108 1216 KKSNSSGSDQEDDEeqKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPkrvsavqYSPPPPSKRPDGE 1295
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831518509 631 KPKAPKLKEPEKPAEPKPesIKSTEIKPKAPKLKEpekptedKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTEN 708
Cdd:PTZ00108 1296 SNGGSKPSSPTKKKVKKR--LEGSLAALKKKKKSE-------KKTARKKKSKTRVKQASASQSSRLLRRPRKKKSDSS 1364
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
386-603 |
3.06e-05 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 47.47 E-value: 3.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 386 KPVKTVNLVVAKaEVPKPKQPTEPKPESIKSTEIK----PKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKapepKTA 461
Cdd:NF040676 169 EEAKTQKVAKAK-ETTKAQEIVKPKEEVKVQEVVKpkeePKVQEIVKPKEEVKVQEEVKPKEEEKVQEIVKPK----EEA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 462 KLAEPAKSVETEIKPKVPKLKEPEKPTEAkpAPIKSTEIKPKAPKLKEPEKPAE--PKPESIKSTEIKpKAPKLKEPEKL 539
Cdd:NF040676 244 KVQEEVKVKEEAKVQEIAKAKEEAKAQEI--AKAKEEAKAQEIAKAKEEAKAQEiaKAKEEEKAQEIA-KAKEEAKAREI 320
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 540 AEPKPESiKWTEIKpkapKLKEPEKPAEPKpeSIKSTEIKPKAPKLKEPEKPAEPKPESIKSTE 603
Cdd:NF040676 321 AKAKEEE-KAREIA----KAKEEAKAREIA--KAKEEAKAREIAKAKEEERAKEASKNNIQSAK 377
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
615-774 |
3.78e-05 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 46.21 E-value: 3.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 615 EKPAEPKPESIKSTeikpkAPKLKEPEKPAEPKPESIKSTEikPKAPKLKEPEKPtedKPAPIKSTENKPEapklQKPKq 694
Cdd:PRK10819 40 ELPAPAQPISVTMV-----APADLEPPQAVQPPPEPVVEPE--PEPEPIPEPPKE---APVVIPKPEPKPK----PKPK- 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 695 ptePKPESIKSTENKPEapklqkpkqpTEVKPEVPKPTEPRKTVGDKPKAPKPKTAKLAEPAKSVEFMPKASQLREPVKP 774
Cdd:PRK10819 105 ---PKPKPVKKVEEQPK----------REVKPVEPRPASPFENTAPARPTSSTATAAASKPVTSVSSGPRALSRNQPQYP 171
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
513-781 |
3.94e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.39 E-value: 3.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 513 PAEPkpesiksteIKPKAPKLKEPEKLAEPkpeSIKWTeikpKAPKLKEPEKPAEPKPESI--KSTEIKPKAPKLKEPEK 590
Cdd:PRK10263 336 PVEP---------VTQTPPVASVDVPPAQP---TVAWQ----PVPGPQTGEPVIAPAPEGYpqQSQYAQPAVQYNEPLQQ 399
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 591 PAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEP-KPESIKSTEIKPKAPKLKEP--- 666
Cdd:PRK10263 400 PVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTfAPQSTYQTEQTYQQPAAQEPlyq 479
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 667 -----EKPTEDKPAPIkSTENKPEAPKLQKPKQPTE--------------PKPESIKstenkpeAPKLQKPKQPTEVKPE 727
Cdd:PRK10263 480 qpqpvEQQPVVEPEPV-VEETKPARPPLYYFEEVEEkrarereqlaawyqPIPEPVK-------EPEPIKSSLKAPSVAA 551
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831518509 728 VPkPTEPRKTVGdkPKAPKPKTAKLAEPAKSVEFMPKAS---------QLREPVKPTVVEPEQ 781
Cdd:PRK10263 552 VP-PVEAAAAVS--PLASGVKKATLATGAAATVAAPVFSlansggprpQVKEGIGPQLPRPKR 611
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
403-729 |
4.04e-05 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 47.36 E-value: 4.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 403 PKQPTE-PKPESIKSTEIKPKAPKLQKPKQPTeVKPEVPKPTEPRKTVGDKPKAPEPKTAklaepaksveteIKPKVPKL 481
Cdd:PHA03379 416 PRPPVEkPRPEVPQSLETATSHGSAQVPEPPP-VHDLEPGPLHDQHSMAPCPVAQLPPGP------------LQDLEPGD 482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 482 KEPEKPTEAKPAPiksteikPKAPKLKEP-EKPAEPKPesiksTEIKPKAPKLKEPEKLA---EPKPESIKWTEIKPkAP 557
Cdd:PHA03379 483 QLPGVVQDGRPAC-------APVPAPAGPiVRPWEASL-----SQVPGVAFAPVMPQPMPvepVPVPTVALERPVCP-AP 549
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 558 KLKEPEKPAEpkPESIKSTEIKPKAPKLKePEKPAEPKPESIKSteikpkAPKLKEPEKPAEPKPESIKSTEIkPKAPKL 637
Cdd:PHA03379 550 PLIAMQGPGE--TSGIVRVRERWRPAPWT-PNPPRSPSQMSVRD------RLARLRAEAQPYQASVEVQPPQL-TQVSPQ 619
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 638 KEPEKPAEPKPESIKSTEIKPKAPKLKEP-----EKPTEDKPAPIKSTENKPEAPkLQKPKQPTEPKPESIKSTENKPEA 712
Cdd:PHA03379 620 QPMEYPLEPEQQMFPGSPFSQVADVMRAGgvpamQPQYFDLPLQQPISQGAPLAP-LRASMGPVPPVPATQPQYFDIPLT 698
|
330 340
....*....|....*....|....*
gi 1831518509 713 PKLQK--------PKQPTEvKPEVP 729
Cdd:PHA03379 699 EPINQgasaahflPQQPME-GPLVP 722
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
445-704 |
4.71e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.39 E-value: 4.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 445 PRKTVGDKPKAPEPKTAkLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKST 524
Cdd:PRK10263 336 PVEPVTQTPPVASVDVP-PAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQ 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 525 EIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKP-ESIKSTEIKPKAPKLKEPEKPAEPKPESIKST- 602
Cdd:PRK10263 415 PAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQStYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEp 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 603 ---EIKPKAPKL-----------KEPEKPA---EPKPESIKSTE-IKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLK 664
Cdd:PRK10263 495 vveETKPARPPLyyfeeveekraREREQLAawyQPIPEPVKEPEpIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLA 574
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1831518509 665 EPEKPTEDKPAPIKSTENKPEaPKLQKPKQPTEPKPESIK 704
Cdd:PRK10263 575 TGAAATVAAPVFSLANSGGPR-PQVKEGIGPQLPRPKRIR 613
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
360-622 |
4.96e-05 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 46.84 E-value: 4.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 360 VSVLAELKKPLEAGPKLPDALEPEIPKPVKTvnlVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKL-QKPKQPTEVKPE 438
Cdd:PLN03209 303 VEVIAETTAPLTPMEELLAKIPSQRVPPKES---DAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVvPRPLSPYTAYED 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 439 VPKPTEPrktvgdkpkAPEPKTAKlAEPAKSVETEIKPKVPKLKEPEKPT----EAKPAPIKSTEIKPKAP-----KLKE 509
Cdd:PLN03209 380 LKPPTSP---------IPTPPSSS-PASSKSVDAVAKPAEPDVVPSPGSAsnvpEVEPAQVEAKKTRPLSPyaryeDLKP 449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 510 PEKPAePKPE-----SIKSTEIKPKAPKLKEPEKLAE---PKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPK 581
Cdd:PLN03209 450 PTSPS-PTAPtgvspSVSSTSSVPAVPDTAPATAATDaaaPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNE 528
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1831518509 582 APKLKEPEKPAEPKPESiKSTEIKPKA----PKLKEPEKPAEPKP 622
Cdd:PLN03209 529 VVKVGNSAPPTALADEQ-HHAQPKPRPlspyTMYEDLKPPTSPTP 572
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
511-682 |
5.13e-05 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 46.51 E-value: 5.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 511 EKPAEPKPESIKSTEIKPKApKLKEPEKLAEP-KPESIKwteikpKAPKLKEPEKPAEPKPESIKSTEIK--PKAPKLKE 587
Cdd:PRK13108 293 DEALEREPAELAAAAVASAA-SAVGPVGPGEPnQPDDVA------EAVKAEVAEVTDEVAAESVVQVADRdgESTPAVEE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 588 PEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPkpesiksTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE 667
Cdd:PRK13108 366 TSEADIEREQPGDLAGQAPAAHQVDAEAASAAP-------EEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPG 438
|
170
....*....|....*
gi 1831518509 668 kPTEDKPAPIKSTEN 682
Cdd:PRK13108 439 -DDPAEPDGIRRQDD 452
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
485-655 |
5.35e-05 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 46.51 E-value: 5.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 485 EKPTEAKPAPIKSTEIKPKApKLKEPEKPAEP-KPESIKsteikpKAPKLKEPEKLAEPKPESIKWTEIK--PKAPKLKE 561
Cdd:PRK13108 293 DEALEREPAELAAAAVASAA-SAVGPVGPGEPnQPDDVA------EAVKAEVAEVTDEVAAESVVQVADRdgESTPAVEE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 562 PEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPkpesiksTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE 641
Cdd:PRK13108 366 TSEADIEREQPGDLAGQAPAAHQVDAEAASAAP-------EEPAALASEAHDETEPEVPEKAAPIPDPAKPDELAVAGPG 438
|
170
....*....|....
gi 1831518509 642 kPAEPKPESIKSTE 655
Cdd:PRK13108 439 -DDPAEPDGIRRQD 451
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
410-629 |
5.36e-05 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 46.96 E-value: 5.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 410 KPESIKSTEIKP-KAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPT 488
Cdd:PTZ00108 1152 IAKEQRLKSKTKgKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQ 1231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 489 EAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEP 568
Cdd:PTZ00108 1232 KTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVK 1311
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1831518509 569 KPEsikstEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPaePKPESIKSTE 629
Cdd:PTZ00108 1312 KRL-----EGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRR--PRKKKSDSSS 1365
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
456-790 |
5.38e-05 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 47.16 E-value: 5.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 456 PEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPA--------PIKSTEIKpKAPKLKEPEKPAEPKPESIKSTeiK 527
Cdd:PLN03237 1073 PFPKKAKSVEAAVAGATDDAAEEEEEIDVSSSSGVRGSdydyllsmAIGTLTLE-KVQELCADRDKLNIEVEDLKKT--T 1149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 528 PKAPKLKEPEKLAEpkpESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESikSTEIKPK 607
Cdd:PLN03237 1150 PKSLWLKDLDALEK---ELDKLDKEDAKAEEAREKLQRAAARGESGAAKKVSRQAPKKPAPKKTTKKASES--ETTEETY 1224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 608 APKLKEPEKPAEPKPESIKSTEIKpKAPKlKEPEKPAEPKPESIKSteiKPKAPKLKEPEKPTEDKPAPIKSTENKPEAP 687
Cdd:PLN03237 1225 GSSAMETENVAEVVKPKGRAGAKK-KAPA-AAKEKEEEDEILDLKD---RLAAYNLDSAPAQSAKMEETVKAVPARRAAA 1299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 688 KLQKPKQPTEPKPESiksTENKPEAPKLQkpkqpteVKPEVPKPTEPRKTVGDKPKAPKPKTAKLAEPAKSVEFMPKASQ 767
Cdd:PLN03237 1300 RKKPLASVSVISDSD---DDDDDFAVEVS-------LAERLKKKGGRKPAAANKKAAKPPAAAKKRGPATVQSGQKLLTE 1369
|
330 340
....*....|....*....|....
gi 1831518509 768 LREPVKPTVVEPEQNL-KLLDKPA 790
Cdd:PLN03237 1370 MLKPAEAIGISPEKKVrKMRASPF 1393
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
565-731 |
8.63e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 46.24 E-value: 8.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 565 PAEPKPESIKSTEIKpkAPKLKEPEKPA-----EPKPESIKS-TEIKPKAPKLKEPE-KPAEPKPESiKSTEIKPKAPKL 637
Cdd:PRK08691 364 ASCDANAVIENTELQ--SPSAQTAEKETaakkpQPRPEAETAqTPVQTASAAAMPSEgKTAGPVSNQ-ENNDVPPWEDAP 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 638 KEPEKPAEPKPESIKSTEikpkapKLKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQP---TEPKPESIKSTENKPEAPK 714
Cdd:PRK08691 441 DEAQTAAGTAQTSAKSIQ------TASEAETPPENQVSKNKAADNETDAPLSEVPSENpiqATPNDEAVETETFAHEAPA 514
|
170 180
....*....|....*....|....
gi 1831518509 715 LQKP-------KQPTEVKPEVPKP 731
Cdd:PRK08691 515 EPFYgygfpdnDCPPEDGAEIPPP 538
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
378-603 |
9.14e-05 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 46.19 E-value: 9.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 378 DALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKP--ESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKP-- 453
Cdd:PTZ00108 1135 DKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKlrKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKpd 1214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 454 -KAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKP-------AEPKPESIKSTE 525
Cdd:PTZ00108 1215 nKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPkrvsavqYSPPPPSKRPDG 1294
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831518509 526 IKPKAPKLKEPEKLAEPKPEsikwtEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPaePKPESIKSTE 603
Cdd:PTZ00108 1295 ESNGGSKPSSPTKKKVKKRL-----EGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRR--PRKKKSDSSS 1365
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
590-760 |
1.16e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 590 KPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPklkEPEKPAEPKPESIKSTEIKPKAPKLKEPEKP 669
Cdd:PRK07994 360 HPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPAS---APQQAPAVPLPETTSQLLAARQQLQRAQGAT 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 670 TEDKPAPIKSTENKPeAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVgDKPKAPKPkT 749
Cdd:PRK07994 437 KAKKSEPAAASRARP-VNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKAL-EHEKTPEL-A 513
|
170
....*....|.
gi 1831518509 750 AKLAEPAKSVE 760
Cdd:PRK07994 514 AKLAAEAIERD 524
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
447-655 |
1.22e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 45.81 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 447 KTVGDKPKAPEPKTAKLAEPAKSVETEiKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPK----LKEPEKPAEPKPESIK 522
Cdd:PTZ00108 1161 KTKGKASKLRKPKLKKKEKKKKKSSAD-KSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNssgsDQEDDEEQKTKPKKSS 1239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 523 STEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPEsikst 602
Cdd:PTZ00108 1240 VKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRL----- 1314
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1831518509 603 EIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPaePKPESIKSTE 655
Cdd:PTZ00108 1315 EGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRR--PRKKKSDSSS 1365
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
404-629 |
1.30e-04 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 45.54 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 404 KQPTEPKPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKapepKTAKLAEPAKSVETEIKPKVPKLKE 483
Cdd:NF040676 166 KAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQEVVKPKEEPKVQEIVKPK----EEVKVQEEVKPKEEEKVQEIVKPKE 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 484 PEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIkPKAPKLKEPEKLAEPKPESiKWTEIKpkapKLKEPE 563
Cdd:NF040676 242 EAKVQEEVKVKEEAKVQEIAKAKEEAKAQEIAKAKEEAKAQEI-AKAKEEAKAQEIAKAKEEE-KAQEIA----KAKEEA 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1831518509 564 KPAE--PKPESIKSTEIKpkapKLKEPEKPAEPKpeSIKSTEIKPKAPKLKEPEKPAEPKPESIKSTE 629
Cdd:NF040676 316 KAREiaKAKEEEKAREIA----KAKEEAKAREIA--KAKEEAKAREIAKAKEEERAKEASKNNIQSAK 377
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
455-687 |
1.53e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.61 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 455 APEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKL- 533
Cdd:PRK07003 409 ALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDa 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 534 -KEPEKLAEPKPESIKWTEIKPKAP----KLKEPEKPAEPKPESiksteikpkapklkEPEKPAEPKPES---------- 598
Cdd:PRK07003 489 aFEPAPRAAAPSAATPAAVPDARAPaaasREDAPAAAAPPAPEA--------------RPPTPAAAAPAAraggaaaald 554
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 599 -IKSTEIKPKAPKLKEPekPAEPKPESIKSTEIKPKAPklkepeKPAEPKPesiksteiKPKAPKLKEPEKPTEDKPAPI 677
Cdd:PRK07003 555 vLRNAGMRVSSDRGARA--AAAAKPAAAPAAAPKPAAP------RVAVQVP--------TPRARAATGDAPPNGAARAEQ 618
|
250
....*....|
gi 1831518509 678 KSTENKPEAP 687
Cdd:PRK07003 619 AAESRGAPPP 628
|
|
| Aim21 |
pfam11489 |
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in ... |
398-690 |
1.61e-04 |
|
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in yeasts. Saccharomyces cerevisiae Aim21 may be involved in mitochondrial migration along actin filament. It may also interact with ribosomes.
Pssm-ID: 371558 [Multi-domain] Cd Length: 677 Bit Score: 45.35 E-value: 1.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 398 AEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAE-PAKSVETEIKP 476
Cdd:pfam11489 332 AVSPSFEREEIVKYEVKSRTESVPESREESKIASIHGSVPSLARHTPLEDVEEYEPLFPEDDSEGAVKkPTEESSRFKRP 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 477 KVPKLKEPEKPTEAKPAPIK-----STEIKPKAPKLKEPEK-------PAEPKPESIKSTEIKPKAPKLK----EPEKLA 540
Cdd:pfam11489 412 ELNHRFPSEDVWEDSPSSLQltatvSTPSNPPPRAFETPEQetsssssEPSLDDQSELKSEDVKERPEVKaqrfPSRDVW 491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 541 EPKPESIKW--TEIKPKAPKLKEPEKPAEPK-PESIKSTEIKPKAPKLKEPEKPAEPKPEsIKSTEIKPKAPKLKEPEKP 617
Cdd:pfam11489 492 EDAPESQELvtTVETPDEVKSTSPGVPTKPAiPARPKSGKPTSPTEKRKPPPVPKKPKPQ-IPARPAKAQPQQAGEEFKP 570
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 618 AEPKPESIKSTEIK-----------------PKAPK--LKEPEKPAEPKPESIKSTEIKPKAPkLKEPEK-----PTEDK 673
Cdd:pfam11489 571 KPRVPARPGGSKISalragfasdlngrlqlgPQAPKkvVEEDKEPSEEKGDKEEEEDTKEKAP-LSDARKgrargPARRK 649
|
330
....*....|....*..
gi 1831518509 674 PAPIKSTENKPEAPKLQ 690
Cdd:pfam11489 650 PPKVVATEKKPVIPSVS 666
|
|
| Aim21 |
pfam11489 |
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in ... |
453-751 |
1.74e-04 |
|
Altered inheritance of mitochondria protein 21; This is a family of proteins conserved in yeasts. Saccharomyces cerevisiae Aim21 may be involved in mitochondrial migration along actin filament. It may also interact with ribosomes.
Pssm-ID: 371558 [Multi-domain] Cd Length: 677 Bit Score: 45.35 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 453 PKAPEPKTAKLAEPAKSVETEikpkVPKLKEPEKPTEAKPAPIK-STEIKPKAPKLKEPEKPAE-----PKPESIKSTEI 526
Cdd:pfam11489 278 YIAPEEYTSRPSSPAPQSSSA----SPSGESGEEERDWYEEPILaSDEVAKEPAGEEPAVSPSFereeiVKYEVKSRTES 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 527 KPKAPKLKEPEKLAEPKPESIKWT---EIKPKAPKLKEPEKP-AEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIK-- 600
Cdd:pfam11489 354 VPESREESKIASIHGSVPSLARHTpleDVEEYEPLFPEDDSEgAVKKPTEESSRFKRPELNHRFPSEDVWEDSPSSLQlt 433
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 601 ---STEIKPKAPKLKEPEK-------PAEPKPESIKSTEIKPKAPKLKEPEKPAE------PKPESIKSTEIKPKAPKLK 664
Cdd:pfam11489 434 atvSTPSNPPPRAFETPEQetsssssEPSLDDQSELKSEDVKERPEVKAQRFPSRdvwedaPESQELVTTVETPDEVKST 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 665 EPEKPTedKPAPIKSTENKPEAPKLQKPKQPTEPKpesikstENKPEAPKLQKPKQPTEVKPEV-PKPTEPRKTVGDKPK 743
Cdd:pfam11489 514 SPGVPT--KPAIPARPKSGKPTSPTEKRKPPPVPK-------KPKPQIPARPAKAQPQQAGEEFkPKPRVPARPGGSKIS 584
|
....*...
gi 1831518509 744 APKPKTAK 751
Cdd:pfam11489 585 ALRAGFAS 592
|
|
| ftsN |
TIGR02223 |
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ... |
513-701 |
1.74e-04 |
|
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 44.30 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 513 PAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESiKWTEIKPKAPKLKEPEKPAEP--KPESIKSTEIKPKAPKLKEPEK 590
Cdd:TIGR02223 48 LTESKQANEPETLQPKNQTENGETAADLPPKPEE-RWSYIEELEAREVLINDPEEPsnGGGVEESAQLTAEQRQLLEQMQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 591 PAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPkapklkePEKPAEPKPESIKSteikpKAPKLKEPEKPT 670
Cdd:TIGR02223 127 ADMRAAEKVLATAPSEQTVAVEARKQTAEKKPQKARTAEAQK-------TPVETEKIASKVKE-----AKQKQKALPKQT 194
|
170 180 190
....*....|....*....|....*....|.
gi 1831518509 671 EDKPAPIKSTENKPEAPKLQKPKQPTEPKPE 701
Cdd:TIGR02223 195 AETQSNSKPIETAPKADKADKTKPKPKEKAE 225
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
431-700 |
1.98e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 45.23 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 431 QPTEVKPEVPKPTePRKTVGDKPKAPEPKTAKLAEPAKSVETeiKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEP 510
Cdd:PRK07003 372 VPARVAGAVPAPG-ARAAAAVGASAVPAVTAVTGAAGAALAP--KAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 511 EKPAEPKPESIKSTEIKPKApklkepEKLAEPKPESIKWTEIKPKAPKlkEPEKPAEPKPESIKSTEIKPKAPKLkePEK 590
Cdd:PRK07003 449 VPAKANARASADSRCDERDA------QPPADSGSASAPASDAPPDAAF--EPAPRAAAPSAATPAAVPDARAPAA--ASR 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 591 PAEPKPESIKSTEIKPKAPKLKEPEKP---AEPKPESIKSTEIKPKAPKLKEPekPAEPKPESIKSTEIKPKAPKLKEPe 667
Cdd:PRK07003 519 EDAPAAAAPPAPEARPPTPAAAAPAARaggAAAALDVLRNAGMRVSSDRGARA--AAAAKPAAAPAAAPKPAAPRVAVQ- 595
|
250 260 270
....*....|....*....|....*....|...
gi 1831518509 668 KPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKP 700
Cdd:PRK07003 596 VPTPRARAATGDAPPNGAARAEQAAESRGAPPP 628
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
563-701 |
2.02e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.58 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 563 EKPAEPKPESIKSTEIKPKApKLKEPEKPAEP------------KPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEI 630
Cdd:PRK13108 293 DEALEREPAELAAAAVASAA-SAVGPVGPGEPnqpddvaeavkaEVAEVTDEVAAESVVQVADRDGESTPAVEETSEADI 371
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1831518509 631 KPKAPKLKEPEKPAEPKPESIKSTEiKPKAPKLKEPEKPTEDKPAPIKSTENKPEApklQKPKQPTEPKPE 701
Cdd:PRK13108 372 EREQPGDLAGQAPAAHQVDAEAASA-APEEPAALASEAHDETEPEVPEKAAPIPDP---AKPDELAVAGPG 438
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
415-608 |
2.55e-04 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 44.60 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 415 KSTEIKPKAPKLQKPKqpteVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKpap 494
Cdd:PRK05901 4 ASTKAELAAEEEAKKK----LKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPK--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 495 iKSTEIKPKAPKLKEPEKPA-------EPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAE 567
Cdd:PRK05901 77 -KKTKTAAKAAAAKAPAKKKlkdeldsSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDED 155
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1831518509 568 PKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKA 608
Cdd:PRK05901 156 DDEDDDDDDVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEA 196
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
557-702 |
2.76e-04 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 43.70 E-value: 2.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 557 PKLKEPEKPA--EPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKA 634
Cdd:pfam06390 97 PELARPECLEydEDDFDTETDSETEPESDIESETEFETEPETEPDTAPTTEPETEPEDEPGPVVPKGATFHQSLTERLHA 176
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1831518509 635 PKLKEPE------KPAEPKPESIKSTEIKPKAPKLKEPEKPtEDKPAPIKSTENKPEAPKLQKPKQPTEPKPES 702
Cdd:pfam06390 177 LKLQSADasprraPPSTQEPESAREGEEPERGPLDKDPRDP-EEEEEEKEEEKQQPHRCKPKKPARRRDPSPES 249
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
369-803 |
2.90e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 44.76 E-value: 2.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 369 PLEAGPKLPDALEPEIPKPVKTVnlvvaKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKqptevKPEVPKPTEPRKT 448
Cdd:pfam03154 47 PSAASTSSNDSKAESMKKSSKKI-----KEEAPSPLKSAKRQREKGASDTEEPERATAKKSK-----TQEISRPNSPSEG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 449 VGDKPKAPEPKTAKLAEPaKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPesiksteikp 528
Cdd:pfam03154 117 EGESSDGRSVNDEGSSDP-KDIDQDNRSTSPSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASPPS---------- 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 529 kaPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPK--PESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKP 606
Cdd:pfam03154 186 --PPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTaaPHTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSP 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 607 KAPKLKEPEKPAEPKPESIKSTEIKPKAPKlkePEKPAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPAPikstenKPEA 686
Cdd:pfam03154 264 QPLPQPSLHGQMPPMPHSLQTGPSHMQHPV---PPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPS------QSQL 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 687 PKLQKPK-QPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAP--KPKTAKLAEPAKS----- 758
Cdd:pfam03154 335 QSQQPPReQPLPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPFQMNSNLPPPPalKPLSSLSTHHPPSahppp 414
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1831518509 759 VEFMPKASQLRE-PVKPTVVEPEQNLKLLDKPAQPEIAKLDEPHKP 803
Cdd:pfam03154 415 LQLMPQSQQLPPpPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQS 460
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
574-748 |
3.18e-04 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 43.32 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 574 KSTEIKPKAPKLKEPEKP-AEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESiksteikpkapklkEPEKPAEPKPESIK 652
Cdd:pfam06390 69 RSAAAAAAAQVFPEPSEPeSDHEDEDFEPELARPECLEYDEDDFDTETDSET--------------EPESDIESETEFET 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 653 STEIKPKAPKLKEPEKPTEDKPAPI--------KSTENKPEAPKLQKPK------QPTEPKPESIKSTENKPEAPKLQKP 718
Cdd:pfam06390 135 EPETEPDTAPTTEPETEPEDEPGPVvpkgatfhQSLTERLHALKLQSADasprraPPSTQEPESAREGEEPERGPLDKDP 214
|
170 180 190
....*....|....*....|....*....|
gi 1831518509 719 KQPTEvkPEVPKPTEPRKTVGDKPKAPKPK 748
Cdd:pfam06390 215 RDPEE--EEEEKEEEKQQPHRCKPKKPARR 242
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
369-735 |
3.66e-04 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 44.27 E-value: 3.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 369 PLEAGP--KLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKsteiKPKAPKLQKPK--------QPTEVKPE 438
Cdd:PHA03377 450 PERPGPsdQPSVPVEPAHLTPVEHTTVILHQPPQSPPTVAIKPAPPPSR----RRRGACVVYDDdiievidvETTEEEES 525
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 439 VPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKV-PKLKEPekPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPK 517
Cdd:PHA03377 526 VTQPAKPHRKVQDGFQRSGRRQKRATPPKVSPSDRGPPKAsPPVMAP--PSTGPRVMATPSTGPRDMAPPSTGPRQQAKC 603
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 518 PESIKSTEIKPKAPKLKEPEKLAEPKPESIKwteikpkapKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE-------- 589
Cdd:PHA03377 604 KDGPPASGPHEKQPPSSAPRDMAPSVVRMFL---------RERLLEQSTGPKPKSFWEMRAGRDGSGIQQEPssrrqpat 674
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 590 KPAEPKPESIKSTEIKPKAPKLKepekpAEPKPESIKSTeIKPKAPKLKEpEKPAEPKPESIKSTEIKPKAPKLKEPEKP 669
Cdd:PHA03377 675 QSTPPRPSWLPSVFVLPSVDAGR-----AQPSEESHLSS-MSPTQPISHE-EQPRYEDPDDPLDLSLHPDQAPPPSHQAP 747
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 670 TedkpapikSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPR 735
Cdd:PHA03377 748 Y--------SGHEEPQAQQAPYPGYWEPRPPQAPYLGYQEPQAQGVQVSSYPGYAGPWGLRAQHPR 805
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
494-754 |
4.39e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.16 E-value: 4.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 494 PIKSTEIKPKAPKLKEPEkpAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESikWTEIKPKAPkLKEPEKPAEPKPESI 573
Cdd:PHA03247 247 PLRGDIAAPAPPPVVGEG--ADRAPETARGATGPPPPPEAAAPNGAAAPPDGV--WGAALAGAP-LALPAPPDPPPPAPA 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 574 KSTEIKPKAPKLKEPEKPAePKPESIKSTEIkpkaPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESiks 653
Cdd:PHA03247 322 GDAEEEDDEDGAMEVVSPL-PRPRQHYPLGF----PKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAAT--- 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 654 teikPKAPKLKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEvKPEVPKPTE 733
Cdd:PHA03247 394 ----PFARGPGGDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPAT-EPAPDDPDD 468
|
250 260
....*....|....*....|....
gi 1831518509 734 PRKTVGDKPKA---PKPKTAKLAE 754
Cdd:PHA03247 469 ATRKALDALRErrpPEPPGADLAE 492
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
352-556 |
4.53e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 43.60 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 352 ELAKPNTEVSVLAELKKPLEAGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKsteiKPKAPKLQKPKQ 431
Cdd:NF033839 293 SAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKP----QPEKPKPEVKPQ 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 432 PTEVKPEV-PKPTEPRKTVGDKPKAPEPKTAKLAEPAKSvetEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEP 510
Cdd:NF033839 369 PEKPKPEVkPQPETPKPEVKPQPEKPKPEVKPQPEKPKP---EVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQ 445
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1831518509 511 EKPAEPKPESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKA 556
Cdd:NF033839 446 PEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQA 491
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
487-594 |
5.62e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.00 E-value: 5.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 487 PTE-AKPAPIKSTEIKPKAPKLKEPEKPAEPKPESiKSTEIKPKapklkepeklaepKPESIKWTEIKPKA--PKLKEPE 563
Cdd:PRK10905 124 PTEpATVAPVRNGNASRQTAKTQTAERPATTRPAR-KQAVIEPK-------------KPQATAKTEPKPVAqtPKRTEPA 189
|
90 100 110
....*....|....*....|....*....|.
gi 1831518509 564 KPAEPKPESIKSTEIKPKAPKLKEPEKPAEP 594
Cdd:PRK10905 190 APVASTKAPAATSTPAPKETATTAPVQTASP 220
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
371-510 |
6.43e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 43.54 E-value: 6.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 371 EAGPKLPDALEPEIPKPVKTVnlvVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKPTEPrktVG 450
Cdd:PRK10263 752 VQQPQQPVAPQQQYQQPQQPV---APQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQP---VA 825
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 451 DKPKAPEPKTAKLAEPAKSVeteIKPKVPKLKEpEKPTEAKPAPIKSTEIKPKAPKLKEP 510
Cdd:PRK10263 826 PQPQYQQPQQPVAPQPQDTL---LHPLLMRNGD-SRPLHKPTTPLPSLDLLTPPPSEVEP 881
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
447-603 |
6.89e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 43.32 E-value: 6.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 447 KTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEI 526
Cdd:PRK07994 362 AAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 527 KPKAPKLKEP-----EKLAEPKPESikwtEIKPKAPKLKEP------EKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPK 595
Cdd:PRK07994 442 EPAAASRARPvnsalERLASVRPAP----SALEKAPAKKEAyrwkatNPVEVKKEPVATPKALKKALEHEKTPELAAKLA 517
|
....*...
gi 1831518509 596 PESIKSTE 603
Cdd:PRK07994 518 AEAIERDP 525
|
|
| Tymo_45kd_70kd |
pfam03251 |
Tymovirus 45/70Kd protein; Tymoviruses are single stranded RNA viruses. This family includes a ... |
409-622 |
6.90e-04 |
|
Tymovirus 45/70Kd protein; Tymoviruses are single stranded RNA viruses. This family includes a protein of unknown function that has been named based on its molecular weight. Tymoviruses such as the ononis yellow mosaic tymovirus encode only three proteins. Of these two are overlapping this protein overlaps a larger ORF that is thought to be the polymerase.
Pssm-ID: 281269 [Multi-domain] Cd Length: 468 Bit Score: 42.86 E-value: 6.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 409 PKPESIKSTEIKPKAPKLQKPKQPTEVKPEVPKP-TEPRKTVGDKPKAPEPKTAKLAEPAKSVET----EIKPKVPKLKE 483
Cdd:pfam03251 243 PRPLAPHSTRDPPPRPITPGPSNTHDLRPLSVLPrTSPRRGLLPNPRRHRTSTGHIPPTTTSRPTgppsRLQRPVHLYQS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 484 PEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKP--ESIKSTEIKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKE 561
Cdd:pfam03251 323 SPHTPNFRPSSIRKDALLQTGPRLGHLERLGQPANlrTSERSPPTKRRLPRSSEPNRLPKPLPEATLAPSYRHRRPYPLL 402
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1831518509 562 PEKPAEPKPESIKST--EIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKP 622
Cdd:pfam03251 403 PNPPAALPSIAYTSSrgKIHHSLPKGALPKEGAPPPPRRLPSPAPRPQLPLRDLGRTPGFPTP 465
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
397-589 |
7.24e-04 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 42.85 E-value: 7.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 397 KAEVPKPK-QPTEPKPESIKSTEIKPKAPK----LQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPE------PKTAKLAE 465
Cdd:pfam13254 160 RPESPKPKaQPSQPAQPAWMKELNKIRQSRasvdLGRPNSFKEVTPVGLMRSPAPGGHSKSPSVSGisadssPTKEEPSE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 466 PAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESiksteiKPKAPKLKEPEKLAEPKPe 545
Cdd:pfam13254 240 EADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEPAAPSKSAEASTEKKEPDTES------SPETSSEKSAPSLLSPVS- 312
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1831518509 546 siKWTEIKPKAPKLKEPEKPaEPKPES--------IKSTEIKPKAPKLKEPE 589
Cdd:pfam13254 313 --KASIDKPLSSPDRDPLSP-KPKPQSppkdfranLRSREVPKDKSKKDEPE 361
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
558-725 |
7.37e-04 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 42.85 E-value: 7.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 558 KLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESI---KSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKA 634
Cdd:pfam13254 199 SFKEVTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEadtLSTDKEQSPAPTSASEPPPKTKELPKDSEEPAAPS 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 635 PKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE-KPTEDKPAPIKSTENKPEAPKLQKPkqptepkPESIKSTENKPEAP 713
Cdd:pfam13254 279 KSAEASTEKKEPDTESSPETSSEKSAPSLLSPVsKASIDKPLSSPDRDPLSPKPKPQSP-------PKDFRANLRSREVP 351
|
170
....*....|..
gi 1831518509 714 KLQKPKQPTEVK 725
Cdd:pfam13254 352 KDKSKKDEPEFK 363
|
|
| TMEM214 |
pfam10151 |
TMEM214, C-terminal, caspase 4 activator; This is the N-terminal domain of transmembrane ... |
360-459 |
9.72e-04 |
|
TMEM214, C-terminal, caspase 4 activator; This is the N-terminal domain of transmembrane family 214, from eukaryotes. The family is localized on the endoplasmic reticulum where it recruits procaspase 4 to the ER and subsequently allows this to be cleaved to caspase 4 so leading to apoptosis.
Pssm-ID: 462966 Cd Length: 661 Bit Score: 42.80 E-value: 9.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 360 VSVLAELKKPLEAGPKLPDALepeipkPVKTV-NLVVAKAEVPKPKQPTEPKPE-SIKSTEIKPKAPKlQKPKQPTEVKP 437
Cdd:pfam10151 20 VKAHAEKKKFAANGPKLEDLL------PLSQVkTLYDNGFNKENKKQNKEQVPPkSTSEAEEKKKQNK-SKPKKKSEKKK 92
|
90 100
....*....|....*....|..
gi 1831518509 438 EVPKPTEPrKTVGDKPKAPEPK 459
Cdd:pfam10151 93 QEPKEKKP-KTLEDALKAIDVA 113
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
483-644 |
1.01e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 41.59 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 483 EPEKPTEAKPAPIKSTEIkpkAPKLKEPEKPAEPKPESIKSTEIKPK-APKLKEPEKLAEPKPEsikwteikpkapklKE 561
Cdd:PRK10819 36 HQVIELPAPAQPISVTMV---APADLEPPQAVQPPPEPVVEPEPEPEpIPEPPKEAPVVIPKPE--------------PK 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 562 PEKPAEPKPESIKSTEIKPkapklKEPEKPAEPKPESIksteIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE 641
Cdd:PRK10819 99 PKPKPKPKPKPVKKVEEQP-----KREVKPVEPRPASP----FENTAPARPTSSTATAAASKPVTSVSSGPRALSRNQPQ 169
|
...
gi 1831518509 642 KPA 644
Cdd:PRK10819 170 YPA 172
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
496-678 |
1.19e-03 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 41.77 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 496 KSTEIKPKAPKLKEPEKP-AEPKPESIKSTEIKPKAPKLKEP----EKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKP 570
Cdd:pfam06390 69 RSAAAAAAAQVFPEPSEPeSDHEDEDFEPELARPECLEYDEDdfdtETDSETEPESDIESETEFETEPETEPDTAPTTEP 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 571 ESIKSTEIKPKAPKLKEPEKPAEPKPESIK--STEIKPK--APKLKEPEKPAEPKPESIKSTEIKPKAPKlKEPEKPAEP 646
Cdd:pfam06390 149 ETEPEDEPGPVVPKGATFHQSLTERLHALKlqSADASPRraPPSTQEPESAREGEEPERGPLDKDPRDPE-EEEEEKEEE 227
|
170 180 190
....*....|....*....|....*....|..
gi 1831518509 647 KPESIKSTEIKPKAPKLKEPEKPTEDKPAPIK 678
Cdd:pfam06390 228 KQQPHRCKPKKPARRRDPSPESPPKKGAIPIR 259
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
506-713 |
1.34e-03 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 42.44 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 506 KLKEPEKPAEPKPESIKSTEIK--PKAPKLKEPeklAEPKPESIKwTEIKPKAPKlKEPEKPAEPKPESIKSTEIKPKAP 583
Cdd:pfam09731 49 YALGEDPPLAPKPKTFRPLQPSvvSAVTGESKE---PKEEKKQVK-IPRQSGVSS-EVAEEEKEATKDAAEAKAQLPKSE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 584 KLKEPEKPAEPKPESIKSTEIKPKAPKLKEPE-KPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPK 662
Cdd:pfam09731 124 QEKEKALEEVLKEAISKAESATAVAKEAKDDAiQAVKAHTDSLKEASDTAEISREKATDSALQKAEALAEKLKEVINLAK 203
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1831518509 663 LKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESI--KSTENKPEAP 713
Cdd:pfam09731 204 QSEEEAAPPLLDAAPETPPKLPEHLDNVEEKVEKAQSLAKLvdQYKELVASER 256
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
554-774 |
1.61e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 42.14 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 554 PKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAE------PKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKS 627
Cdd:PRK07003 398 AVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADrgddaaDGDAPVPAKANARASADSRCDERDAQPPADSGSA 477
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 628 TEIKPKAPKL--KEPEKPAEPKPESIKSTEIKPKAPKLKepekPTEDKPAPIKSTEnkPEAPklqkPKQPTEPKPESIK- 704
Cdd:PRK07003 478 SAPASDAPPDaaFEPAPRAAAPSAATPAAVPDARAPAAA----SREDAPAAAAPPA--PEAR----PPTPAAAAPAARAg 547
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 705 ----------------STENKPEAPKLQKP--KQPTEVKPEVPKPTEPRKTvgdkPKAPKPKTAKLAEPAKSVefmPKAS 766
Cdd:PRK07003 548 gaaaaldvlrnagmrvSSDRGARAAAAAKPaaAPAAAPKPAAPRVAVQVPT----PRARAATGDAPPNGAARA---EQAA 620
|
....*...
gi 1831518509 767 QLREPVKP 774
Cdd:PRK07003 621 ESRGAPPP 628
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
646-811 |
1.90e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.72 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 646 PKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEAPklqkPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVK 725
Cdd:PRK14950 366 PQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETA----TPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEK 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 726 PEVPKPTEPrKTVGDKPKAPKPKTAKLAEPAKSV-EFMPKASQLREPVKPTVVEP---EQNLKLLDKPAQPEIAKLDEP- 800
Cdd:PRK14950 442 PKYTPPAPP-KEEEKALIADGDVLEQLEAIWKQIlRDVPPRSPAVQALLSSGVRPvsvEKNTLTLSFKSKFHKDKIEEPe 520
|
170
....*....|..
gi 1831518509 801 -HKPTEEVLERC 811
Cdd:PRK14950 521 nRKITEELLSNF 532
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
458-745 |
1.95e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 458 PKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSteikPKAPKLKEPE 537
Cdd:PHA03378 580 PTTSQLASSAPSYAQTPWPVPHPSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNV----LVFPTPHQPP 655
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 538 KLaEPKPESIKWTEIkPKAPKLKEPEKPAEPKPESIKSTEIKP--KAPKLKEPEK--PAEPKPESIKSTEIKPKAPKLKE 613
Cdd:PHA03378 656 QV-EITPYKPTWTQI-GHIPYQPSPTGANTMLPIQWAPGTMQPppRAPTPMRPPAapPGRAQRPAAATGRARPPAAAPGR 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 614 PEKPA-----EPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEAPK 688
Cdd:PHA03378 734 ARPPAaapgrARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRA 813
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1831518509 689 LQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAP 745
Cdd:PHA03378 814 APGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAAGPTPSPGSGTSDKIVQAP 870
|
|
| ftsN |
TIGR02223 |
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ... |
585-754 |
1.98e-03 |
|
cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]
Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 41.22 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 585 LKEPEKPAEPKPESIKSTEIKPKAPKLKEPE--------KPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEI 656
Cdd:TIGR02223 48 LTESKQANEPETLQPKNQTENGETAADLPPKpeerwsyiEELEAREVLINDPEEPSNGGGVEESAQLTAEQRQLLEQMQA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 657 KPKAPKLKEPEKPTED--KPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEP 734
Cdd:TIGR02223 128 DMRAAEKVLATAPSEQtvAVEARKQTAEKKPQKARTAEAQKTPVETEKIASKVKEAKQKQKALPKQTAETQSNSKPIETA 207
|
170 180
....*....|....*....|
gi 1831518509 735 RKTvgDKPKAPKPKTAKLAE 754
Cdd:TIGR02223 208 PKA--DKADKTKPKPKEKAE 225
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
430-534 |
2.09e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 41.37 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 430 KQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKLAEPAKSVETEIKPKVPklkePEKPTEAKPAPIKSTEIKPKAPKLKE 509
Cdd:COG3266 256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSAVALPAAP----AAAAAAAAPAEAAAPQPTAAKPVVTE 331
|
90 100
....*....|....*....|....*
gi 1831518509 510 PEKPAEPKPESIKSTEiKPKAPKLK 534
Cdd:COG3266 332 TAAPAAPAPEAAAAAA-APAAPAVA 355
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
573-665 |
2.18e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 573 IKSTEIKPKAPklkePEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIK 652
Cdd:PTZ00144 118 IDTGGAPPAAA----PAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
90
....*....|....
gi 1831518509 653 STEIKPK-APKLKE 665
Cdd:PTZ00144 194 MSRMRQRiAERLKA 207
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
486-655 |
2.24e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 41.39 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 486 KPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPklkEPEKLAEPKPESIKWTEIKPKAPKLKEPEKP 565
Cdd:PRK07994 360 HPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPAS---APQQAPAVPLPETTSQLLAARQQLQRAQGAT 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 566 AEPKPESIKSTEIKPkAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAE 645
Cdd:PRK07994 437 KAKKSEPAAASRARP-VNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAK 515
|
170
....*....|
gi 1831518509 646 PKPESIKSTE 655
Cdd:PRK07994 516 LAAEAIERDP 525
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
556-639 |
2.34e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 556 APKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPK-A 634
Cdd:PTZ00144 123 APPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVPMSRMRQRiA 202
|
....*
gi 1831518509 635 PKLKE 639
Cdd:PTZ00144 203 ERLKA 207
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
460-561 |
2.66e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.21 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 460 TAKLAEPAKSVET-----EIKPKV-PKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKL 533
Cdd:PTZ00144 99 TKIFAEEGDTVEVgaplsEIDTGGaPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPP 178
|
90 100
....*....|....*....|....*....
gi 1831518509 534 KEPEKLAEPKPESIKWTEIKPK-APKLKE 561
Cdd:PTZ00144 179 PTPVARADPRETRVPMSRMRQRiAERLKA 207
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
289-483 |
2.96e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 41.19 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 289 KEMKSLKLERDEKDKGKQQKKKKKVVVTPSWGFRSDSYVPSNlEKNREKKNRKKEKRMARNAVELAKPNTEVSVLAELKK 368
Cdd:PTZ00108 1174 LKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDN-KKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSK 1252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 369 PLEAGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKAPKLQKPKQPTEVKPEvpKPTEPRKT 448
Cdd:PTZ00108 1253 SSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALK--KKKKSEKK 1330
|
170 180 190
....*....|....*....|....*....|....*
gi 1831518509 449 VGDKPKapepKTAKLAEPAKSVETEIKPKVPKLKE 483
Cdd:PTZ00108 1331 TARKKK----SKTRVKQASASQSSRLLRRPRKKKS 1361
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
588-698 |
3.30e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.69 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 588 PEKPAEPKPesIKSTEIKPKAPKLKEPEKPAEPKPESiKSTEIKPKapklkepekpaepKPESIKSTEIKPKA--PKLKE 665
Cdd:PRK10905 124 PTEPATVAP--VRNGNASRQTAKTQTAERPATTRPAR-KQAVIEPK-------------KPQATAKTEPKPVAqtPKRTE 187
|
90 100 110
....*....|....*....|....*....|...
gi 1831518509 666 PEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEP 698
Cdd:PRK10905 188 PAAPVASTKAPAATSTPAPKETATTAPVQTASP 220
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
651-752 |
3.96e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 651 IKSTEIKPKAPklkePEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPK 730
Cdd:PTZ00144 118 IDTGGAPPAAA----PAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRVP 193
|
90 100
....*....|....*....|..
gi 1831518509 731 PTEPRKTVGDKPKAPKPKTAKL 752
Cdd:PTZ00144 194 MSRMRQRIAERLKASQNTCAML 215
|
|
| PHA03379 |
PHA03379 |
EBNA-3A; Provisional |
623-791 |
4.20e-03 |
|
EBNA-3A; Provisional
Pssm-ID: 223066 [Multi-domain] Cd Length: 935 Bit Score: 40.81 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 623 ESIKSTEIKPKAPKLKEPEKPAE-PKPESIKSTEIKPKAPKLKEPEKPT--EDKPAPIKSTENKPEAPKLQKPKQPTEP- 698
Cdd:PHA03379 399 ERAREALEKASEPTYGTPRPPVEkPRPEVPQSLETATSHGSAQVPEPPPvhDLEPGPLHDQHSMAPCPVAQLPPGPLQDl 478
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 699 -----KPESIKSTENKP--------------EAPKLQKPKQ-PTEVKPEvPKPTE--PRKTVG-DKPKAPKPKTAKLAEP 755
Cdd:PHA03379 479 epgdqLPGVVQDGRPACapvpapagpivrpwEASLSQVPGVaFAPVMPQ-PMPVEpvPVPTVAlERPVCPAPPLIAMQGP 557
|
170 180 190
....*....|....*....|....*....|....*..
gi 1831518509 756 AKSVEFMPKASQLR-EPVKPTVVEPEQNLKLLDKPAQ 791
Cdd:PHA03379 558 GETSGIVRVRERWRpAPWTPNPPRSPSQMSVRDRLAR 594
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
621-710 |
4.29e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 40.44 E-value: 4.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 621 KPESIKSTEIKPKAPKLKEPEKPAEPKPEsiksteikPKAPKLKEPEKPTEDKPAPIKSTENKPEAPKlQKPKQPTEPKP 700
Cdd:PTZ00144 113 APLSEIDTGGAPPAAAPAAAAAAKAEKTT--------PEKPKAAAPTPEPPAASKPTPPAAAKPPEPA-PAAKPPPTPVA 183
|
90
....*....|
gi 1831518509 701 ESIKSTENKP 710
Cdd:PTZ00144 184 RADPRETRVP 193
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
671-773 |
4.33e-03 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 40.64 E-value: 4.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 671 EDKPAPIKSTENKPEAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPKPKTA 750
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
|
90 100 110
....*....|....*....|....*....|.
gi 1831518509 751 KLAEPAKSV-EFM------PKASQLRE-PVK 773
Cdd:PRK12270 119 PLRGAAAAVaKNMdaslevPTATSVRAvPAK 149
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
501-686 |
4.43e-03 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 40.36 E-value: 4.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 501 KPKAPKLKEPEKPAEPKPESIKSteiKPKAPKLKEPEKLAEPKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTEIKP 580
Cdd:PRK05901 7 KAELAAEEEAKKKLKKLAAKSKS---KGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKTAA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 581 KAPKLKEPEKPA-------EPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKPKAPKLKEPEKPAEPKPESIKS 653
Cdd:PRK05901 84 KAAAAKAPAKKKlkdeldsSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDDDD 163
|
170 180 190
....*....|....*....|....*....|...
gi 1831518509 654 TEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEA 686
Cdd:PRK05901 164 DVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEA 196
|
|
| PHA03308 |
PHA03308 |
transcriptional regulator ICP4; Provisional |
589-702 |
4.61e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165563 [Multi-domain] Cd Length: 1463 Bit Score: 40.95 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 589 EKPAEPKPESIKSTEIKP--KAPKLKEPEKPAEPKPESIKSTeikpkapKLKEPEKPAEPKPE--SIKSTEIKPKAPKLK 664
Cdd:PHA03308 756 ESPANPWPRAPPCDEQEPlsVSPYGPEPDRPPDDDFETRKGL-------KRKSSEDHADPIPEgnATKKTCGLQGLPDSL 828
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1831518509 665 EPEKPTEDK------PAPIksTENKPEAPKLQKPKQPTEPK-PES 702
Cdd:PHA03308 829 PPAVPETDRdnpllpPCPI--TPEGPPCPPREEPQQPQEPQePQS 871
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
360-525 |
5.18e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 40.23 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 360 VSVLAELKKPLEAGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKSTEIKPKA-PKLQKPKQPTEVKPE 438
Cdd:PRK07994 362 AAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAArQQLQRAQGATKAKKS 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 439 VPKPTEPRKTVgdkPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKSTEIKPKAPKLKEPEKPAEPKP 518
Cdd:PRK07994 442 EPAAASRARPV---NSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAA 518
|
....*..
gi 1831518509 519 ESIKSTE 525
Cdd:PRK07994 519 EAIERDP 525
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
557-729 |
5.90e-03 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 39.46 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 557 PKLKEPEKPAEPkpESIKSTEIKPKAPKLKEPEKPAEPKPESIKSTEIKpkapklKEPEKPAEPKPESIKSTEIKPKAPK 636
Cdd:pfam06390 81 PEPSEPESDHED--EDFEPELARPECLEYDEDDFDTETDSETEPESDIE------SETEFETEPETEPDTAPTTEPETEP 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 637 LKEPEKPAEPKPESIKSTEIKPKAPKLKEPE------KPTEDKPAPIKSTENKPEAPKLQKPKQPTEpKPESIKSTENKP 710
Cdd:pfam06390 153 EDEPGPVVPKGATFHQSLTERLHALKLQSADasprraPPSTQEPESAREGEEPERGPLDKDPRDPEE-EEEEKEEEKQQP 231
|
170
....*....|....*....
gi 1831518509 711 EAPKLQKPKQPTEVKPEVP 729
Cdd:pfam06390 232 HRCKPKKPARRRDPSPESP 250
|
|
| Cornifin |
pfam02389 |
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ... |
657-776 |
6.24e-03 |
|
Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.
Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 37.73 E-value: 6.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 657 KPKAPKLKEPEKPTEDKPAPIKSTEnkPEAPKLQKPKQPTEPKPESIKSTE-NKPEAPKLQKPKQPTEVKPEVPKPTEPR 735
Cdd:pfam02389 7 QPCQPPPQEPCVPTTKEPCHSKVPE--PCNPKVPEPCCPKVPEPCCPKVPEpCCPKVPEPCCPKVPEPCYPKVPEPCSPK 84
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1831518509 736 KTVGDKPKAPKPKTAKLAEPAKSVEFMPKASQLREPVKPTV 776
Cdd:pfam02389 85 VPEPCHPKAPEPCHPKVPEPCYPKAPEPCQPKVPEPCPSTV 125
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
606-804 |
6.34e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.45 E-value: 6.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 606 PKAPKLKEPEKPAEPKPESIKSTEIKPkAPKLKEPEKPAEPKPESIksteikPKAPKLKEPEKPTED---KPAPIKSTEN 682
Cdd:PRK10263 336 PVEPVTQTPPVASVDVPPAQPTVAWQP-VPGPQTGEPVIAPAPEGY------PQQSQYAQPAVQYNEplqQPVQPQQPYY 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 683 KP--EAPKLQKPKQPTEPKPESIKSTENKPEAPKLQKPKQPTEVKPEV-PKPTEPRKTVGDKPKAPKP--KTAKLAEPAK 757
Cdd:PRK10263 409 APaaEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFaPQSTYQTEQTYQQPAAQEPlyQQPQPVEQQP 488
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1831518509 758 SVEFMPKASQLR---------EPVKPTVVEPEQNLKLLDKPAqPEIAKLDEPHKPT 804
Cdd:PRK10263 489 VVEPEPVVEETKparpplyyfEEVEEKRAREREQLAAWYQPI-PEPVKEPEPIKSS 543
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
563-721 |
7.51e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 38.90 E-value: 7.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 563 EKPAEPKPESIKSTeikpkAPKLKEPEKPAEPKPESIKSTEikpkapklkePEKPAEPKPESIKSTEIKPKAPKlkePEK 642
Cdd:PRK10819 40 ELPAPAQPISVTMV-----APADLEPPQAVQPPPEPVVEPE----------PEPEPIPEPPKEAPVVIPKPEPK---PKP 101
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1831518509 643 PAEPKPESIKSTEIKPkapklKEPEKPTEDKPApiKSTENKPEAPKLQKPKQPTEPKPESikSTENKPEAPKLQKPKQP 721
Cdd:PRK10819 102 KPKPKPKPVKKVEEQP-----KREVKPVEPRPA--SPFENTAPARPTSSTATAAASKPVT--SVSSGPRALSRNQPQYP 171
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
642-810 |
7.62e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 39.85 E-value: 7.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 642 KPAEPKPESIKSTEIKPKAPKLKEPEKPTEDKPAPIKSTENKPEAPKLQKPKQPTEPKPES--IKSTENKPEAPKLQKPK 719
Cdd:PRK07994 360 HPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSqlLAARQQLQRAQGATKAK 439
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 720 QPTEVKPEVPKPTE-PRKTVGDKPKAPKPKTAklaEPAKSVEFMPKASQLREPVKPTVVEPEQNLKLLDKPAQPEIAKld 798
Cdd:PRK07994 440 KSEPAAASRARPVNsALERLASVRPAPSALEK---APAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAA-- 514
|
170
....*....|..
gi 1831518509 799 ephKPTEEVLER 810
Cdd:PRK07994 515 ---KLAAEAIER 523
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
420-577 |
7.75e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 39.85 E-value: 7.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 420 KPKA--PKLQKPKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTAKlAEPAKSVETEIKPKVPKLKEPEKPTEAKPAPIKS 497
Cdd:PRK07994 360 HPAAplPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPA-SAPQQAPAVPLPETTSQLLAARQQLQRAQGATKA 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 498 TEIKPKAPKLKEPEKPA-EPKPESIKSTEIKPKAPKLKEPEKLAEPKPE-SIKWTEIKPKAPK-----LKEPEKPAEPKP 570
Cdd:PRK07994 439 KKSEPAAASRARPVNSAlERLASVRPAPSALEKAPAKKEAYRWKATNPVeVKKEPVATPKALKkalehEKTPELAAKLAA 518
|
....*..
gi 1831518509 571 ESIKSTE 577
Cdd:PRK07994 519 EAIERDP 525
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
383-505 |
9.09e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 39.41 E-value: 9.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 383 EIPKPVKTVNLVVAKAEVPKPKQPTEPKPESIKST--EIKPKAPKLQKPKQPTEVKPEVPKPTeprktvgdkPKAPEPKT 460
Cdd:PRK14950 348 QLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTpaPSTRPKAAAAANIPPKEPVRETATPP---------PVPPRPVA 418
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1831518509 461 AKLAEPAKSVETEIKPKVPKlkePEKPTEAKPAPIKSTEIKPKAP 505
Cdd:PRK14950 419 PPVPHTPESAPKLTRAAIPV---DEKPKYTPPAPPKEEEKALIAD 460
|
|
| NESP55 |
pfam06390 |
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian ... |
372-546 |
9.12e-03 |
|
Neuroendocrine-specific golgi protein P55 (NESP55); This family consists of several mammalian neuroendocrine-specific golgi protein P55 (NESP55) sequences. NESP55 is a novel member of the chromogranin family and is a soluble, acidic, heat-stable secretory protein that is expressed exclusively in endocrine and nervous tissues, although less widely than chromogranins.
Pssm-ID: 115071 [Multi-domain] Cd Length: 261 Bit Score: 38.69 E-value: 9.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 372 AGPKLPDALEPEIPKPVKTVNLVVAKAEVPKPKQP---TEPKPESIKSTEIKPKAPKLQKPkqptEVKPEVPKPTEPRKT 448
Cdd:pfam06390 76 AAQVFPEPSEPESDHEDEDFEPELARPECLEYDEDdfdTETDSETEPESDIESETEFETEP----ETEPDTAPTTEPETE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 449 VGDKPKAPEPKTAKLAEPAKSVETEIKPKVPKLKEPE-KPTEAKPAPIKSTEIKPKAPKLKEPEKPAEpKPESIKSTEIK 527
Cdd:pfam06390 152 PEDEPGPVVPKGATFHQSLTERLHALKLQSADASPRRaPPSTQEPESAREGEEPERGPLDKDPRDPEE-EEEEKEEEKQQ 230
|
170
....*....|....*....
gi 1831518509 528 PKAPKLKEPEKLAEPKPES 546
Cdd:pfam06390 231 PHRCKPKKPARRRDPSPES 249
|
|
| PLN03237 |
PLN03237 |
DNA topoisomerase 2; Provisional |
385-577 |
9.88e-03 |
|
DNA topoisomerase 2; Provisional
Pssm-ID: 215641 [Multi-domain] Cd Length: 1465 Bit Score: 39.85 E-value: 9.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 385 PKPVKTVNLVVAKAEVP--KPKQPTEPKPESIKSteiKPKAPKLQK-PKQPTEVKPEVPKPTEPRKTVGDKPKAPEPKTA 461
Cdd:PLN03237 1235 AEVVKPKGRAGAKKKAPaaAKEKEEEDEILDLKD---RLAAYNLDSaPAQSAKMEETVKAVPARRAAARKKPLASVSVIS 1311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1831518509 462 KLAEPAKSVETEIKPKVPKLKEP-EKPTEAKPAPIKsteiKPKAPKlkePEKPAEPKPESIKSTEIKPKAPKL-----KE 535
Cdd:PLN03237 1312 DSDDDDDDFAVEVSLAERLKKKGgRKPAAANKKAAK----PPAAAK---KRGPATVQSGQKLLTEMLKPAEAIgispeKK 1384
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1831518509 536 PEKLAePKPESIKWTEIKPKAPKLKEPEKPAEPKPESIKSTE 577
Cdd:PLN03237 1385 VRKMR-ASPFNKKSGSVLGRAATNKETESSENVSGSSSSEKD 1425
|
|
| |
