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Conserved domains on  [gi|1845976370|ref|NP_001369904|]
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Uncharacterized protein CELE_K01A6.5 [Caenorhabditis elegans]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10263 super family cl35903
DNA translocase FtsK; Provisional
 83-160 3.22e-03

DNA translocase FtsK; Provisional


The actual alignment was detected with superfamily member PRK10263:

Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 38.14  E-value: 3.22e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845976370   83 PLAQYQMPERPVVPPNQDGATLENIVEMEKKPVSKQPTiraltpSGGAKTAQPISVAQPPPVQQKSQKSIIPKKDKTI 160
Cdd:PRK10263   774 PQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPV------APQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTL 845
 
Name Accession Description Interval E-value
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 83-160 3.22e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 38.14  E-value: 3.22e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845976370   83 PLAQYQMPERPVVPPNQDGATLENIVEMEKKPVSKQPTiraltpSGGAKTAQPISVAQPPPVQQKSQKSIIPKKDKTI 160
Cdd:PRK10263   774 PQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPV------APQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTL 845
 
Name Accession Description Interval E-value
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 83-160 3.22e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 38.14  E-value: 3.22e-03
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1845976370   83 PLAQYQMPERPVVPPNQDGATLENIVEMEKKPVSKQPTiraltpSGGAKTAQPISVAQPPPVQQKSQKSIIPKKDKTI 160
Cdd:PRK10263   774 PQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPV------APQPQYQQPQQPVAPQPQYQQPQQPVAPQPQDTL 845
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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