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Conserved domains on  [gi|1904615199|ref|NP_001373798|]
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uncharacterized protein C12orf42 isoform 4 [Homo sapiens]

Protein Classification

DUF4607 domain-containing protein( domain architecture ID 10634100)

DUF4607 domain-containing protein similar to Homo sapiens protein C12orf42

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4607 pfam15380
Domain of unknown function (DUF4607); This family of proteins is found in eukaryotes. Proteins ...
29-292 1.17e-155

Domain of unknown function (DUF4607); This family of proteins is found in eukaryotes. Proteins in this family are typically between 207 and 359 amino acids in length.


:

Pssm-ID: 464688  Cd Length: 264  Bit Score: 435.06  E-value: 1.17e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199  29 MACKRLLHTCQYIVPRCSVSTVSFDEESYEEFRSSPAPSSETDEAPLIFTARGETEERARGAPKQAWNSSFLE-QLVKKP 107
Cdd:pfam15380   1 MACKRLLCTRQYIIPRSPVSTASFDEESYGEARPSPTPSSETDEVPLIFTAREEINKRTRRAPKQAWSSPFLEqQMAKKP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199 108 NWAHSVNPVHLEAQGIHISRHTRPKGQPLSSPKKNSGSAARPSTAIGLCRRSQTPGALQSTGPSNTELEPEERMAVPAGA 187
Cdd:pfam15380  81 IPSHSVNPLHLEAAGTHIKRHARPQNQPLVNSKGDSGPAARPFTAIGLCRRSQTPYAPQSVSRSSSEPELEERTATTAGA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199 188 QAHPDdIQSRLLGASGNPVGKGAVAMAPEMLPKHPHTPRDRRPQADTSLHGNLAGAPLPLLAGASTHFPSKRLIKVCSSA 267
Cdd:pfam15380 161 PANPD-VQSRLLGASGNPVGRGAVAMAPEMLPKHPHAPGERRPRADASLHGNLAGAPLPLLAGASTHLPSKRLIKVCSSP 239
                         250       260
                  ....*....|....*....|....*
gi 1904615199 268 PPRPTRRFHTVCSQALSRPVVNAHL 292
Cdd:pfam15380 240 PPRPPRRFHTACSQALPRPVVNAHL 264
 
Name Accession Description Interval E-value
DUF4607 pfam15380
Domain of unknown function (DUF4607); This family of proteins is found in eukaryotes. Proteins ...
29-292 1.17e-155

Domain of unknown function (DUF4607); This family of proteins is found in eukaryotes. Proteins in this family are typically between 207 and 359 amino acids in length.


Pssm-ID: 464688  Cd Length: 264  Bit Score: 435.06  E-value: 1.17e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199  29 MACKRLLHTCQYIVPRCSVSTVSFDEESYEEFRSSPAPSSETDEAPLIFTARGETEERARGAPKQAWNSSFLE-QLVKKP 107
Cdd:pfam15380   1 MACKRLLCTRQYIIPRSPVSTASFDEESYGEARPSPTPSSETDEVPLIFTAREEINKRTRRAPKQAWSSPFLEqQMAKKP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199 108 NWAHSVNPVHLEAQGIHISRHTRPKGQPLSSPKKNSGSAARPSTAIGLCRRSQTPGALQSTGPSNTELEPEERMAVPAGA 187
Cdd:pfam15380  81 IPSHSVNPLHLEAAGTHIKRHARPQNQPLVNSKGDSGPAARPFTAIGLCRRSQTPYAPQSVSRSSSEPELEERTATTAGA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199 188 QAHPDdIQSRLLGASGNPVGKGAVAMAPEMLPKHPHTPRDRRPQADTSLHGNLAGAPLPLLAGASTHFPSKRLIKVCSSA 267
Cdd:pfam15380 161 PANPD-VQSRLLGASGNPVGRGAVAMAPEMLPKHPHAPGERRPRADASLHGNLAGAPLPLLAGASTHLPSKRLIKVCSSP 239
                         250       260
                  ....*....|....*....|....*
gi 1904615199 268 PPRPTRRFHTVCSQALSRPVVNAHL 292
Cdd:pfam15380 240 PPRPPRRFHTACSQALPRPVVNAHL 264
 
Name Accession Description Interval E-value
DUF4607 pfam15380
Domain of unknown function (DUF4607); This family of proteins is found in eukaryotes. Proteins ...
29-292 1.17e-155

Domain of unknown function (DUF4607); This family of proteins is found in eukaryotes. Proteins in this family are typically between 207 and 359 amino acids in length.


Pssm-ID: 464688  Cd Length: 264  Bit Score: 435.06  E-value: 1.17e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199  29 MACKRLLHTCQYIVPRCSVSTVSFDEESYEEFRSSPAPSSETDEAPLIFTARGETEERARGAPKQAWNSSFLE-QLVKKP 107
Cdd:pfam15380   1 MACKRLLCTRQYIIPRSPVSTASFDEESYGEARPSPTPSSETDEVPLIFTAREEINKRTRRAPKQAWSSPFLEqQMAKKP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199 108 NWAHSVNPVHLEAQGIHISRHTRPKGQPLSSPKKNSGSAARPSTAIGLCRRSQTPGALQSTGPSNTELEPEERMAVPAGA 187
Cdd:pfam15380  81 IPSHSVNPLHLEAAGTHIKRHARPQNQPLVNSKGDSGPAARPFTAIGLCRRSQTPYAPQSVSRSSSEPELEERTATTAGA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1904615199 188 QAHPDdIQSRLLGASGNPVGKGAVAMAPEMLPKHPHTPRDRRPQADTSLHGNLAGAPLPLLAGASTHFPSKRLIKVCSSA 267
Cdd:pfam15380 161 PANPD-VQSRLLGASGNPVGRGAVAMAPEMLPKHPHAPGERRPRADASLHGNLAGAPLPLLAGASTHLPSKRLIKVCSSP 239
                         250       260
                  ....*....|....*....|....*
gi 1904615199 268 PPRPTRRFHTVCSQALSRPVVNAHL 292
Cdd:pfam15380 240 PPRPPRRFHTACSQALPRPVVNAHL 264
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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