Latrophilin-like protein 1 [Caenorhabditis elegans]
Gal_Rha_Lectin superfamily-containing protein( domain architecture ID 1903869)
Gal_Rha_Lectin superfamily-containing protein
List of domain hits
Name | Accession | Description | Interval | E-value | ||
Gal_Rha_Lectin super family | cl45893 | Galactose/rhamnose-binding lectin domain; Galactose/rhamnose-binding lectin domain is formed ... |
38-98 | 1.29e-28 | ||
Galactose/rhamnose-binding lectin domain; Galactose/rhamnose-binding lectin domain is formed from a four-stranded antiparallel beta-sheet which packs against an alpha-helix. It was originally described as galactose-binding lectin domain since it was found in a galactose-binding sea urchin egg lectin (SUEL). SUEL was first isolated as a D-galactoside binding lectin, it was later shown that it binds to L-rhamnose preferentially. Galactose/rhamnose-binding lectin domain is also found in many rhamnose-binding lectins, such as Oncorhynchus keta L-rhamnose-binding lectins (CSLs) and Silurus asotus rhamnose-binding lectin (SAL). In addition, the superfamily includes many SUEL/CSLs/SAL homologous proteins, such as plant beta-galactosidases, mammalian latrophilins, Caenorhabditis elegans protein EVA-1 and its homolog, human protein EVA-1 homolog C (also known as C21orf63). Due to the lack of galactose/rhamnose-binding key residues, some superfamily members may not form a binding pocket for galactose/rhamnose. Therefore, they are unlikely to act as galactose/rhamnose-binding lectins. The actual alignment was detected with superfamily member cd22839: Pssm-ID: 459238 [Multi-domain] Cd Length: 95 Bit Score: 99.42 E-value: 1.29e-28
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Name | Accession | Description | Interval | E-value | ||
Gal_Rha_Lectin_LAT1 | cd22839 | galactose/rhamnose binding lectin domain found in Caenorhabditis elegans latrophilin-like ... |
38-98 | 1.29e-28 | ||
galactose/rhamnose binding lectin domain found in Caenorhabditis elegans latrophilin-like protein 1 (LAT1) and similar proteins; LAT1 plays a role in the establishment of anterior-posterior polarity in tissues during embryogenesis. It is required for the alignment of the mitotic spindles and division planes. It may have a role in cell death events and play an essential role in normal defection and oocyte fertilization. LAT1 is involved in sperm function. it operates in pharyngeal pumping during feeding. LAT1 contains a galactose/rhamnose binding lectin domain at the N-terminus. Pssm-ID: 438696 [Multi-domain] Cd Length: 95 Bit Score: 99.42 E-value: 1.29e-28
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Gal_Lectin | pfam02140 | Galactose binding lectin domain; |
51-99 | 3.28e-05 | ||
Galactose binding lectin domain; Pssm-ID: 460460 [Multi-domain] Cd Length: 79 Bit Score: 39.20 E-value: 3.28e-05
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Name | Accession | Description | Interval | E-value | ||
Gal_Rha_Lectin_LAT1 | cd22839 | galactose/rhamnose binding lectin domain found in Caenorhabditis elegans latrophilin-like ... |
38-98 | 1.29e-28 | ||
galactose/rhamnose binding lectin domain found in Caenorhabditis elegans latrophilin-like protein 1 (LAT1) and similar proteins; LAT1 plays a role in the establishment of anterior-posterior polarity in tissues during embryogenesis. It is required for the alignment of the mitotic spindles and division planes. It may have a role in cell death events and play an essential role in normal defection and oocyte fertilization. LAT1 is involved in sperm function. it operates in pharyngeal pumping during feeding. LAT1 contains a galactose/rhamnose binding lectin domain at the N-terminus. Pssm-ID: 438696 [Multi-domain] Cd Length: 95 Bit Score: 99.42 E-value: 1.29e-28
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Gal_Rha_Lectin_SUL-I-like | cd22827 | galactose/rhamnose binding lectin domain found in Toxopneustes pileolus rhamnose-binding ... |
42-98 | 8.44e-09 | ||
galactose/rhamnose binding lectin domain found in Toxopneustes pileolus rhamnose-binding lectin SUL-I and similar proteins; SUL-I is a galactose/rhamnose-binding lectin with mitogenic, chemotactic, and cytotoxic activity. These activities can be triggered by binding of the lectin to specific carbohydrate chains on target cells. SUL-I may be involved in self-defense against invading microorganisms. SUL-I is composed of three distinctive domains with a folding structure similar to galactose/rhamnose-binding lectin domain found in proteins such as mammalian latrophilins, Oncorhynchus keta L-rhamnose-binding lectins (CSLs), and Silurus asotus rhamnose-binding lectin (SAL). The family also includes Heliocidaris crassispina D-galactoside-specific lectin, also known as sea urchin egg lectin or SUEL, and Echinometra lucunter L-rhamnose-binding lectin ELEL-1, both of which contain only one galactose/rhamnose-binding lectin domain. SUEL binds D-galactoside. It may play an important role in the activation of eggs triggered by fertilization, or in their subsequent differentiation. The dimeric form is essential for hemagglutination activity of SUEL. ELEL-1 is a rhamnose-binding lectin that also binds alpha-D-melibiose, alpha-D-lactose, beta-D-lactose, methyl-alpha-D-galactopyranoside, methyl-beta-D--galactopyranoside and D-galactose, but not D-arabinose, L-fucose, D-glucose, D-mannose, D-maltose, D-sucrose, N-acetyl-D-galactosamine, N-acetyl-D-glucosamine, N-acetyl-D-mannosamine-D-xylose, or by glycoproteins orosomucoid, thyroglobulin, ovomucoid and porcine stomach mucin. It shows cation-independent hemagglutinating activity against rabbit and human erythrocytes. ELEL-1 agglutinates cells of Gram-positive bacterial species S. aureus but not those of Gram-negative E. coli. Pssm-ID: 438684 [Multi-domain] Cd Length: 89 Bit Score: 48.74 E-value: 8.44e-09
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Gal_Rha_Lectin_dCirl | cd22830 | galactose/rhamnose binding lectin domain found in Drosophila melanogaster Latrophilin Cirl and ... |
44-98 | 1.57e-08 | ||
galactose/rhamnose binding lectin domain found in Drosophila melanogaster Latrophilin Cirl and similar proteins; Latrophilin Cirl (calcium-independent receptor for latrotoxin) is an adhesion-type G-protein-coupled receptor (aGPCR) that acts as a molecular sensor and signal transducer that detects and converts mechanical stimuli into a metabotropic response. It functions in mechanosensory neurons by modulating ionotropic receptor currents, the initiating step of cellular mechanosensation. The model corresponds to a galactose/rhamnose-binding lectin domain found at the N-terminus of Latrophilin Cirl. Pssm-ID: 438687 [Multi-domain] Cd Length: 92 Bit Score: 48.00 E-value: 1.57e-08
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Gal_Rha_Lectin | cd22823 | Galactose/rhamnose-binding lectin domain; Galactose/rhamnose-binding lectin domain is formed ... |
42-98 | 2.95e-08 | ||
Galactose/rhamnose-binding lectin domain; Galactose/rhamnose-binding lectin domain is formed from a four-stranded antiparallel beta-sheet which packs against an alpha-helix. It was originally described as galactose-binding lectin domain since it was found in a galactose-binding sea urchin egg lectin (SUEL). SUEL was first isolated as a D-galactoside binding lectin, it was later shown that it binds to L-rhamnose preferentially. Galactose/rhamnose-binding lectin domain is also found in many rhamnose-binding lectins, such as Oncorhynchus keta L-rhamnose-binding lectins (CSLs) and Silurus asotus rhamnose-binding lectin (SAL). In addition, the superfamily includes many SUEL/CSLs/SAL homologous proteins, such as plant beta-galactosidases, mammalian latrophilins, Caenorhabditis elegans protein EVA-1 and its homolog, human protein EVA-1 homolog C (also known as C21orf63). Due to the lack of galactose/rhamnose-binding key residues, some superfamily members may not form a binding pocket for galactose/rhamnose. Therefore, they are unlikely to act as galactose/rhamnose-binding lectins. Pssm-ID: 438682 [Multi-domain] Cd Length: 91 Bit Score: 47.50 E-value: 2.95e-08
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Gal_Lectin | pfam02140 | Galactose binding lectin domain; |
51-99 | 3.28e-05 | ||
Galactose binding lectin domain; Pssm-ID: 460460 [Multi-domain] Cd Length: 79 Bit Score: 39.20 E-value: 3.28e-05
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Gal_Rha_Lectin_EVA1_EVA1C_rpt1 | cd22828 | first galactose/rhamnose binding lectin domain found in Caenorhabditis elegans protein EVA-1, ... |
44-68 | 3.50e-04 | ||
first galactose/rhamnose binding lectin domain found in Caenorhabditis elegans protein EVA-1, human protein EVA-1 homolog C and similar proteins; The family includes Caenorhabditis elegans protein EVA-1 and its homologs, such as human protein EVA-1 homolog C (also known as C21orf63). EVA-1 functions as an UNC-40 coreceptor to enhance attraction to the MADD-4 guidance cue in C. elegans. It also acts as a receptor for slt-1 and is required for the guidance of the AVM pioneer axon to the ventral nerve cord. Human C21orf63 is a type-1 transmembrane heparin-binding protein. Both human C21orf63 is a type-1 transmembrane heparin-binding protein. Members in this family contain two tandem galactose/rhamnose-binding lectin domains. This model corresponds to the first one. Pssm-ID: 438685 [Multi-domain] Cd Length: 105 Bit Score: 36.87 E-value: 3.50e-04
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Gal_Rha_Lectin_RBL_rpt3 | cd22837 | third galactose/rhamnose binding lectin domain found in Silurus asotus rhamnose-binding lectin ... |
42-87 | 6.28e-04 | ||
third galactose/rhamnose binding lectin domain found in Silurus asotus rhamnose-binding lectin (RBL) and similar proteins; RBL, also known as Silurus asotus (catfish) roe lectin (SAL), is a lectin that binds L-rhamnose. It also binds monosaccharides possessing steric similarity to the hydroxyl group orientation at C2 and C4 of the pyranose ring structure of L-rhamnose, such as L-mannose and L-lyxose. RBL does not require a Ca2+ ion or free thiol group for its agglutination activity. RBL contains three galactose/rhamnose-binding lectin domains. This model corresponds to the third one. Pssm-ID: 438694 [Multi-domain] Cd Length: 87 Bit Score: 35.86 E-value: 6.28e-04
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Gal_Rha_Lectin_LPHNs | cd22826 | galactose/rhamnose binding lectin domain found in latrophilins; Latrophilins, also called ... |
44-98 | 2.04e-03 | ||
galactose/rhamnose binding lectin domain found in latrophilins; Latrophilins, also called lectomedins or latrotoxin receptors, belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: latrophilin-1 (LPHN1), Latrophilin-2 (LPHN2), and Latrophilin-3 (LPHN3). The LPHN1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. LPHN2 and LPHN3, although sharing strong sequence homology to LPHN1, do not bind alpha-latrotoxin. While LPHN3 is also brain specific, LPHN2, is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. All members in this family contain a galactose/rhamnose-binding lectin domain at N-terminus. Pssm-ID: 438683 [Multi-domain] Cd Length: 92 Bit Score: 34.60 E-value: 2.04e-03
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Gal_Rha_Lectin_SML_rpt2 | cd22835 | second galactose/rhamnose binding lectin domain found in Scomberomorus niphonius ... |
43-93 | 3.78e-03 | ||
second galactose/rhamnose binding lectin domain found in Scomberomorus niphonius L-rhamnose-binding lectin (SML) and similar proteins; SML is a rhamnose-binding lectin that also binds melibiose, raffinose, D-galactose, L-arabinose, D-fucose, maltose and D-glucose with decreasing affinity. It does not bind D-arabinose, L-fucose, lactose, xylose or 2-deoxy-D-galactose. SML shows strong hemagglutinating activity against rabbit erythrocytes. SML contains two tandem galactose/rhamnose-binding lectin domains. This model corresponds to the second one. Pssm-ID: 438692 [Multi-domain] Cd Length: 92 Bit Score: 33.81 E-value: 3.78e-03
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Gal_Rha_Lectin_nemgal | cd22838 | galactose/rhamnose binding lectin domain found in Hydra vulgaris nematogalectin and similar ... |
43-98 | 5.60e-03 | ||
galactose/rhamnose binding lectin domain found in Hydra vulgaris nematogalectin and similar proteins; Nematogalectin, also called nemgal, is a nematocyst protein with an N-terminal GlyXY domain and a galactose/rhamnose binding lectin domain. There are two nematogalectins, A and B, in Hydra, and they are the products of alternative splicing. They are major components of the nematocyst tubule. Nematogalectin functions as a trimer that could bind to multiple chondroitin glycosaminoglycan molecules and stabilize the chondroitin proteoglycan layer. Pssm-ID: 438695 [Multi-domain] Cd Length: 100 Bit Score: 33.79 E-value: 5.60e-03
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Blast search parameters | ||||
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