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Conserved domains on  [gi|1972288295|ref|NP_001380252|]
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Adenosine 3'-phospho 5'-phosphosulfate transporter 1 [Caenorhabditis elegans]

Protein Classification

nucleotide-sugar transporter family protein( domain architecture ID 706892)

nucleotide-sugar transporter family protein may mediate the transport of nucleotides or sugars or their derivatives; belongs to the drug/metabolite transporter (DMT) superfamily

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UAA super family cl26745
UAA transporter family; This family includes transporters with a specificity for ...
 1-106 6.54e-11

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


The actual alignment was detected with superfamily member pfam08449:

Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 57.69  E-value: 6.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972288295   1 MILMAGYLLFDAFTLNWQKALFDTKPKVSKyQMMFGVNFFSAILcavSLIEQGTLWSSIKFGAEHVDFSR--------DV 72
Cdd:pfam08449 161 IAMLSGALLLDAFLGNYQEKTYKKYGKHSK-EMLFYSHLLSLPF---FLLLQGDLFSAVQFCSQSPDKAVlslpsmlfYL 236

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1972288295  73 FLLSLSGAIGQIFIYSTIERFGPIVFAVIMTIRQ 106
Cdd:pfam08449 237 LLNVLTQYVCIRGVFILISEFGALTVTLVTTLRK 270
 
Name Accession Description Interval E-value
UAA pfam08449
UAA transporter family; This family includes transporters with a specificity for ...
 1-106 6.54e-11

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 57.69  E-value: 6.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972288295   1 MILMAGYLLFDAFTLNWQKALFDTKPKVSKyQMMFGVNFFSAILcavSLIEQGTLWSSIKFGAEHVDFSR--------DV 72
Cdd:pfam08449 161 IAMLSGALLLDAFLGNYQEKTYKKYGKHSK-EMLFYSHLLSLPF---FLLLQGDLFSAVQFCSQSPDKAVlslpsmlfYL 236

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1972288295  73 FLLSLSGAIGQIFIYSTIERFGPIVFAVIMTIRQ 106
Cdd:pfam08449 237 LLNVLTQYVCIRGVFILISEFGALTVTLVTTLRK 270
 
Name Accession Description Interval E-value
UAA pfam08449
UAA transporter family; This family includes transporters with a specificity for ...
 1-106 6.54e-11

UAA transporter family; This family includes transporters with a specificity for UDP-N-acetylglucosamine.


Pssm-ID: 462479 [Multi-domain]  Cd Length: 307  Bit Score: 57.69  E-value: 6.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1972288295   1 MILMAGYLLFDAFTLNWQKALFDTKPKVSKyQMMFGVNFFSAILcavSLIEQGTLWSSIKFGAEHVDFSR--------DV 72
Cdd:pfam08449 161 IAMLSGALLLDAFLGNYQEKTYKKYGKHSK-EMLFYSHLLSLPF---FLLLQGDLFSAVQFCSQSPDKAVlslpsmlfYL 236

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1972288295  73 FLLSLSGAIGQIFIYSTIERFGPIVFAVIMTIRQ 106
Cdd:pfam08449 237 LLNVLTQYVCIRGVFILISEFGALTVTLVTTLRK 270
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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