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Conserved domains on  [gi|2072406527|ref|NP_001382560|]
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neuroblastoma breakpoint family member 14 isoform 2 [Homo sapiens]

Protein Classification

kinesin family protein( domain architecture ID 13530238)

kinesin family protein is a microtubule-dependent molecular motor that plays an important role in intracellular transport and in cell division and has ATPase-containing motor domain; similar to carboxy-terminal kinesins that contains a C-terminal domain responsible for the motor activity (it hydrolyzes ATP and binds microtubules)

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2144-2211 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2144 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2211
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2388-2455 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2388 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2455
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2632-2699 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2632 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2699
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1900-1967 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1900 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1967
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2901-2962 4.07e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.85  E-value: 4.07e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072406527 2901 DQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFAL 2962
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 680-747 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527  680 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 747
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1093-1160 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1093 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1160
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1337-1404 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1337 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1404
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1583-1648 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 1583 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1648
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1827-1892 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 1827 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1892
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2071-2136 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2071 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2136
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2315-2380 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2315 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2380
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2559-2624 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2559 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2624
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2801-2868 1.92e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 75.92  E-value: 1.92e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2801 YQEVEEDQDPSCPRLSRELLDEKDPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2868
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1419-1479 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1419 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1479
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1663-1723 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1663 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1723
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 931-991 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527  931 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 991
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 762-822 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527  762 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 822
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1175-1235 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1175 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1235
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 855-916 5.44e-15

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 71.69  E-value: 5.44e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072406527  855 DQNPPCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 916
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1512-1572 8.36e-15

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 71.30  E-value: 8.36e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1512 DQNPPCPRLSRELLHEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLA 1572
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 605-671 1.35e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.35e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2072406527  605 DQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 671
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2000-2060 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2000 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2060
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2732-2792 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2732 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2792
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2488-2548 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2488 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2548
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2244-2304 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2244 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2304
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1756-1816 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1756 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1816
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1268-1328 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1268 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1328
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1024-1084 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1024 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1084
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 448-511 3.04e-12

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 63.98  E-value: 3.04e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2072406527  448 EVAEKVQKSSAP---REMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTL 511
Cdd:pfam06758    2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 180-240 1.14e-09

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 56.66  E-value: 1.14e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2072406527  180 EKVLESSAP---REVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTL 240
Cdd:pfam06758    5 EEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 542-596 6.31e-06

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


:

Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 46.26  E-value: 6.31e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2072406527  542 PVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMA 596
Cdd:pfam06758   13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
SMC_prok_B super family cl37069
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
 11-421 8.11e-04

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


The actual alignment was detected with superfamily member TIGR02168:

Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 45.43  E-value: 8.11e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   11 EKAEMNILEINETLRpqlaEKKQQFRNLKEKcfltqlagflANQQKKYKY--EECKDLIKFMLRNERQFKEEKLAEQLKQ 88
Cdd:TIGR02168  182 ERTRENLDRLEDILN----ELERQLKSLERQ----------AEKAERYKElkAELRELELALLVLRLEELREELEELQEE 247

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   89 AEELRQykvLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPYEPDKSQGQDLQEQLaegcrlaQHLVQKLSPENDE 168
Cdd:TIGR02168  248 LKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQK-------QILRERLANLERQ 317

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  169 DEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAItcsnshgpcdsnqphknikitfEEDEVNSTLvVDRESSH 248
Cdd:TIGR02168  318 LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEA----------------------ELEELEAEL-EELESRL 374

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  249 DECQDALNilpvpgptssatnvsmvvsagPLSSEKAEmnileinekLRPQLAEKKQQFRNLKEKcfLTQLSGFLANQQkk 328
Cdd:TIGR02168  375 EELEEQLE---------------------TLRSKVAQ---------LELQIASLNNEIERLEAR--LERLEDRRERLQ-- 420

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  329 ykyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLREKLREGRDASRSLNEHLQALLTPDEPD 408
Cdd:TIGR02168  421 ---QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERL 497

                          410
                   ....*....|...
gi 2072406527  409 KSQGQDLQEQLAE 421
Cdd:TIGR02168  498 QENLEGFSEGVKA 510
 
Name Accession Description Interval E-value
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2144-2211 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2144 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2211
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2388-2455 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2388 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2455
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2632-2699 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2632 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2699
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1900-1967 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1900 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1967
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2901-2962 4.07e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.85  E-value: 4.07e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072406527 2901 DQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFAL 2962
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 680-747 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527  680 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 747
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1093-1160 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1093 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1160
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1337-1404 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1337 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1404
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1583-1648 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 1583 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1648
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1827-1892 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 1827 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1892
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2071-2136 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2071 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2136
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2315-2380 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2315 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2380
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2559-2624 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2559 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2624
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2801-2868 1.92e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 75.92  E-value: 1.92e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2801 YQEVEEDQDPSCPRLSRELLDEKDPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2868
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1419-1479 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1419 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1479
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1663-1723 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1663 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1723
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 931-991 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527  931 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 991
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 762-822 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527  762 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 822
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1175-1235 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1175 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1235
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 855-916 5.44e-15

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 71.69  E-value: 5.44e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072406527  855 DQNPPCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 916
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1512-1572 8.36e-15

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 71.30  E-value: 8.36e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1512 DQNPPCPRLSRELLHEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLA 1572
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 605-671 1.35e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.35e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2072406527  605 DQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 671
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2000-2060 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2000 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2060
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2732-2792 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2732 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2792
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2488-2548 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2488 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2548
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2244-2304 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2244 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2304
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1756-1816 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1756 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1816
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1268-1328 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1268 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1328
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1024-1084 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1024 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1084
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 448-511 3.04e-12

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 63.98  E-value: 3.04e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2072406527  448 EVAEKVQKSSAP---REMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTL 511
Cdd:pfam06758    2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 180-240 1.14e-09

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 56.66  E-value: 1.14e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2072406527  180 EKVLESSAP---REVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTL 240
Cdd:pfam06758    5 EEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 542-596 6.31e-06

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 46.26  E-value: 6.31e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2072406527  542 PVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMA 596
Cdd:pfam06758   13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
 11-421 8.11e-04

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 45.43  E-value: 8.11e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   11 EKAEMNILEINETLRpqlaEKKQQFRNLKEKcfltqlagflANQQKKYKY--EECKDLIKFMLRNERQFKEEKLAEQLKQ 88
Cdd:TIGR02168  182 ERTRENLDRLEDILN----ELERQLKSLERQ----------AEKAERYKElkAELRELELALLVLRLEELREELEELQEE 247

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   89 AEELRQykvLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPYEPDKSQGQDLQEQLaegcrlaQHLVQKLSPENDE 168
Cdd:TIGR02168  248 LKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQK-------QILRERLANLERQ 317

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  169 DEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAItcsnshgpcdsnqphknikitfEEDEVNSTLvVDRESSH 248
Cdd:TIGR02168  318 LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEA----------------------ELEELEAEL-EELESRL 374

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  249 DECQDALNilpvpgptssatnvsmvvsagPLSSEKAEmnileinekLRPQLAEKKQQFRNLKEKcfLTQLSGFLANQQkk 328
Cdd:TIGR02168  375 EELEEQLE---------------------TLRSKVAQ---------LELQIASLNNEIERLEAR--LERLEDRRERLQ-- 420

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  329 ykyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLREKLREGRDASRSLNEHLQALLTPDEPD 408
Cdd:TIGR02168  421 ---QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERL 497

                          410
                   ....*....|...
gi 2072406527  409 KSQGQDLQEQLAE 421
Cdd:TIGR02168  498 QENLEGFSEGVKA 510
PRK03918 PRK03918
DNA double-strand break repair ATPase Rad50;
12-421 1.06e-03

DNA double-strand break repair ATPase Rad50;


Pssm-ID: 235175 [Multi-domain]  Cd Length: 880  Bit Score: 44.67  E-value: 1.06e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   12 KAEMNILEINETLRPQLAEKKQQFRNLKEKcfLTQLAGFLANQQKKYK-YEECKDLI------KFMLRNERQFKEEKLAE 84
Cdd:PRK03918   186 KRTENIEELIKEKEKELEEVLREINEISSE--LPELREELEKLEKEVKeLEELKEEIeelekeLESLEGSKRKLEEKIRE 263

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   85 QLKQAEELRQYKVLVHSQERELTQLREKLREgrdasrslYEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSP 164
Cdd:PRK03918   264 LEERIEELKKEIEELEEKVKELKELKEKAEE--------YIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE 335

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  165 ENDEDEDEDVQVEEAEKVLESSAPReVQKAEESKVPEDSLEECA--ITCSNshgPCDSNQPHKNIK-----ITFEEDEVN 237
Cdd:PRK03918   336 KEERLEELKKKLKELEKRLEELEER-HELYEEAKAKKEELERLKkrLTGLT---PEKLEKELEELEkakeeIEEEISKIT 411

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  238 S------TLVVDRESSHDECQDALNILPVPGPtssatnvsmvvsagPLSSEKAEMNILEINEKLRPQLAEKKQqfrnlke 311
Cdd:PRK03918   412 ArigelkKEIKELKKAIEELKKAKGKCPVCGR--------------ELTEEHRKELLEEYTAELKRIEKELKE------- 470

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  312 kcfltqlsgfLANQQKKYKyEECKDLIKFMLRNERQFKEEKLAEQLKQAEE-LRQYKV-LVHAQERELTQLREKLREGRD 389
Cdd:PRK03918   471 ----------IEEKERKLR-KELRELEKVLKKESELIKLKELAEQLKELEEkLKKYNLeELEKKAEEYEKLKEKLIKLKG 539

                          410       420       430
                   ....*....|....*....|....*....|....*
gi 2072406527  390 ASRSLN---EHLQALLTPDEPDKSQGQDLQEQLAE 421
Cdd:PRK03918   540 EIKSLKkelEKLEELKKKLAELEKKLDELEEELAE 574
 
Name Accession Description Interval E-value
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2144-2211 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2144 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2211
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2388-2455 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2388 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2455
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2632-2699 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2632 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 2699
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1900-1967 6.35e-19

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 82.86  E-value: 6.35e-19
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1900 DQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1967
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2901-2962 4.07e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.85  E-value: 4.07e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072406527 2901 DQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFAL 2962
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 680-747 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527  680 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 747
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1093-1160 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1093 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1160
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1337-1404 6.19e-17

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 77.46  E-value: 6.19e-17
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 1337 YQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1404
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1583-1648 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 1583 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1648
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1827-1892 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 1827 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 1892
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2071-2136 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2071 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2136
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2315-2380 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2315 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2380
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2559-2624 1.50e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 76.31  E-value: 1.50e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2072406527 2559 EVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2624
Cdd:pfam06758    3 EEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2801-2868 1.92e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 75.92  E-value: 1.92e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2072406527 2801 YQEVEEDQDPSCPRLSRELLDEKDPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 2868
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1419-1479 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1419 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1479
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1663-1723 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1663 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1723
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 931-991 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527  931 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 991
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 762-822 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527  762 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 822
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1175-1235 8.61e-16

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 74.00  E-value: 8.61e-16
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1175 QDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSL 1235
Cdd:pfam06758    8 QEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 855-916 5.44e-15

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 71.69  E-value: 5.44e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2072406527  855 DQNPPCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLAL 916
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1512-1572 8.36e-15

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 71.30  E-value: 8.36e-15
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1512 DQNPPCPRLSRELLHEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLA 1572
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 605-671 1.35e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.35e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2072406527  605 DQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 671
Cdd:pfam06758    1 DEEEEEDQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2000-2060 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2000 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2060
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2732-2792 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2732 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2792
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2488-2548 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2488 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2548
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 2244-2304 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 2244 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 2304
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1756-1816 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1756 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1816
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1268-1328 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1268 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1328
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 1024-1084 1.64e-14

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 70.53  E-value: 1.64e-14
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2072406527 1024 DQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLA 1084
Cdd:pfam06758    7 DQEPLAPRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 448-511 3.04e-12

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 63.98  E-value: 3.04e-12
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2072406527  448 EVAEKVQKSSAP---REMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTL 511
Cdd:pfam06758    2 EEEEEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 180-240 1.14e-09

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 56.66  E-value: 1.14e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2072406527  180 EKVLESSAP---REVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTL 240
Cdd:pfam06758    5 EEDQEPLAPrlsRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSAL 68
Olduvai pfam06758
Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the ...
 542-596 6.31e-06

Olduvai domain; This domain formerly known as DUF1220 or NBPF domain has been renamed as the Olduvai domain. It is found highly duplicated in the human lineage.


Pssm-ID: 429104 [Multi-domain]  Cd Length: 68  Bit Score: 46.26  E-value: 6.31e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2072406527  542 PVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMA 596
Cdd:pfam06758   13 PRLSRELPEVEEQEVPQDSLDECYLTPSVLPDLSDSYQPYRSTIFSFEEQQVSSA 67
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
 11-421 8.11e-04

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 45.43  E-value: 8.11e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   11 EKAEMNILEINETLRpqlaEKKQQFRNLKEKcfltqlagflANQQKKYKY--EECKDLIKFMLRNERQFKEEKLAEQLKQ 88
Cdd:TIGR02168  182 ERTRENLDRLEDILN----ELERQLKSLERQ----------AEKAERYKElkAELRELELALLVLRLEELREELEELQEE 247

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   89 AEELRQykvLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPYEPDKSQGQDLQEQLaegcrlaQHLVQKLSPENDE 168
Cdd:TIGR02168  248 LKEAEE---ELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQK-------QILRERLANLERQ 317

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  169 DEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAItcsnshgpcdsnqphknikitfEEDEVNSTLvVDRESSH 248
Cdd:TIGR02168  318 LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEA----------------------ELEELEAEL-EELESRL 374

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  249 DECQDALNilpvpgptssatnvsmvvsagPLSSEKAEmnileinekLRPQLAEKKQQFRNLKEKcfLTQLSGFLANQQkk 328
Cdd:TIGR02168  375 EELEEQLE---------------------TLRSKVAQ---------LELQIASLNNEIERLEAR--LERLEDRRERLQ-- 420

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  329 ykyEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLREKLREGRDASRSLNEHLQALLTPDEPD 408
Cdd:TIGR02168  421 ---QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERL 497

                          410
                   ....*....|...
gi 2072406527  409 KSQGQDLQEQLAE 421
Cdd:TIGR02168  498 QENLEGFSEGVKA 510
PRK03918 PRK03918
DNA double-strand break repair ATPase Rad50;
12-421 1.06e-03

DNA double-strand break repair ATPase Rad50;


Pssm-ID: 235175 [Multi-domain]  Cd Length: 880  Bit Score: 44.67  E-value: 1.06e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   12 KAEMNILEINETLRPQLAEKKQQFRNLKEKcfLTQLAGFLANQQKKYK-YEECKDLI------KFMLRNERQFKEEKLAE 84
Cdd:PRK03918   186 KRTENIEELIKEKEKELEEVLREINEISSE--LPELREELEKLEKEVKeLEELKEEIeelekeLESLEGSKRKLEEKIRE 263

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527   85 QLKQAEELRQYKVLVHSQERELTQLREKLREgrdasrslYEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSP 164
Cdd:PRK03918   264 LEERIEELKKEIEELEEKVKELKELKEKAEE--------YIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEE 335

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  165 ENDEDEDEDVQVEEAEKVLESSAPReVQKAEESKVPEDSLEECA--ITCSNshgPCDSNQPHKNIK-----ITFEEDEVN 237
Cdd:PRK03918   336 KEERLEELKKKLKELEKRLEELEER-HELYEEAKAKKEELERLKkrLTGLT---PEKLEKELEELEkakeeIEEEISKIT 411

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  238 S------TLVVDRESSHDECQDALNILPVPGPtssatnvsmvvsagPLSSEKAEMNILEINEKLRPQLAEKKQqfrnlke 311
Cdd:PRK03918   412 ArigelkKEIKELKKAIEELKKAKGKCPVCGR--------------ELTEEHRKELLEEYTAELKRIEKELKE------- 470

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2072406527  312 kcfltqlsgfLANQQKKYKyEECKDLIKFMLRNERQFKEEKLAEQLKQAEE-LRQYKV-LVHAQERELTQLREKLREGRD 389
Cdd:PRK03918   471 ----------IEEKERKLR-KELRELEKVLKKESELIKLKELAEQLKELEEkLKKYNLeELEKKAEEYEKLKEKLIKLKG 539

                          410       420       430
                   ....*....|....*....|....*....|....*
gi 2072406527  390 ASRSLN---EHLQALLTPDEPDKSQGQDLQEQLAE 421
Cdd:PRK03918   540 EIKSLKkelEKLEELKKKLAELEKKLDELEEELAE 574
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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