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Conserved domains on  [gi|2172663945|ref|NP_001386047|]
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dnaJ homolog subfamily B member 2 isoform 2 [Rattus norvegicus]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-110 4.65e-41

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 144.67  E-value: 4.65e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSr 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KE-AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGG- 77

                          90       100
                  ....*....|....*....|....*...
gi 2172663945  83 setGGMEPGFTFTFRSPEEVFREFFGSG 110
Cdd:TIGR02349  78 ---GGFNGFDIGFFGDFGDIFGDFFGGG 102
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-110 4.65e-41

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 144.67  E-value: 4.65e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSr 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KE-AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGG- 77

                          90       100
                  ....*....|....*....|....*...
gi 2172663945  83 setGGMEPGFTFTFRSPEEVFREFFGSG 110
Cdd:TIGR02349  78 ---GGFNGFDIGFFGDFGDIFGDFFGGG 102
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-110 1.88e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 143.75  E-value: 1.88e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGpsrs 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGG---- 80

                          90       100
                  ....*....|....*....|....*....
gi 2172663945  84 etGGM--EPGFTFTFrspEEVFREFFGSG 110
Cdd:PRK10767   81 --GGFggGGGFGDIF---GDIFGDIFGGG 104
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 3.24e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 126.05  E-value: 3.24e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-85 3.64e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 120.96  E-value: 3.64e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSR 82
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAE 79


                  ...
gi 2172663945  83 SET 85
Cdd:COG0484    80 SAA 82
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-61 2.30e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.79  E-value: 2.30e-31
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2172663945    3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-119 6.50e-31

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 119.54  E-value: 6.50e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGagsgpsrs 83
Cdd:NF037946    7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG-------- 76

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2172663945  84 etggmEPGFTFtfrSPEEVFREFFGSGDPFSELFDD 119
Cdd:NF037946   77 -----EGGFGF---DAFDVFSSFFETINKSGAFLDD 104
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-58 2.37e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.01  E-value: 2.37e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:cd06257     2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-110 4.65e-41

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 144.67  E-value: 4.65e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSr 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD-KE-AEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGG- 77

                          90       100
                  ....*....|....*....|....*...
gi 2172663945  83 setGGMEPGFTFTFRSPEEVFREFFGSG 110
Cdd:TIGR02349  78 ---GGFNGFDIGFFGDFGDIFGDFFGGG 102
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-110 1.88e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 143.75  E-value: 1.88e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGpsrs 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGG---- 80

                          90       100
                  ....*....|....*....|....*....
gi 2172663945  84 etGGM--EPGFTFTFrspEEVFREFFGSG 110
Cdd:PRK10767   81 --GGFggGGGFGDIF---GDIFGDIFGGG 104
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 3.24e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 126.05  E-value: 3.24e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-110 1.78e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 130.27  E-value: 1.78e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSRs 83
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKE-AEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFS- 83

                          90       100
                  ....*....|....*....|....*..
gi 2172663945  84 etggmepGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14294   84 -------GFDDIFSSFGDIFEDFFGFG 103
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-85 3.64e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 120.96  E-value: 3.64e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSR 82
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATELAE 79


                  ...
gi 2172663945  83 SET 85
Cdd:COG0484    80 SAA 82
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 4-117 3.57e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 124.47  E-value: 3.57e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGpsrs 83
Cdd:PRK14301    6 YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPE-AEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGF---- 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2172663945  84 etGGmepgftftFRSPEEVFREFfgsGDPFSELF 117
Cdd:PRK14301   81 --GG--------FSSAEDIFSHF---SDIFGDLF 101
PRK14289 PRK14289
molecular chaperone DnaJ;
4-132 4.52e-33

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 124.56  E-value: 4.52e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSRS 83
Cdd:PRK14289    7 YYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKE-AEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGGFS 85

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 2172663945  84 EtGGMepgftftfrSPEEVFREFfgsGDPFSELFDDLGAFSELQNQGSR 132
Cdd:PRK14289   86 G-EGM---------SMEDIFSMF---GDIFGGHGGGFGGFGGFGGGGSQ 121
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 4-146 1.03e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 121.07  E-value: 1.03e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGRegltgAGSGPSRS 83
Cdd:PRK14281    5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKE-AEEHFKEVNEAYEVLSNDDKRRRYDQFGH-----AGVGSSAA 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2172663945  84 ETGGmePGFTftfrspeevfreffGSGDPFSELFDdlgAFSELQNQGSRLTG-PFFTFSSSFPG 146
Cdd:PRK14281   79 SGGG--PGYG--------------GGGGDFNDIFS---AFNDMFGGGARRGGgSPFGFEDVFGG 123
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-61 2.30e-31

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 110.79  E-value: 2.30e-31
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2172663945    3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 4-115 6.22e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 118.72  E-value: 6.22e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPdNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGsgpsrS 83
Cdd:PRK14291    5 YYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPE-AEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSG-----Q 77

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2172663945  84 ETGGMEPGFTFTFRSPEEVFREF---FGSGDPFSE 115
Cdd:PRK14291   78 QQQGQEGFSDFGGGNIEDILEDVfdiFGFGDIFGR 112
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
4-119 6.50e-31

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 119.54  E-value: 6.50e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGagsgpsrs 83
Cdd:NF037946    7 YYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDG-------- 76

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2172663945  84 etggmEPGFTFtfrSPEEVFREFFGSGDPFSELFDD 119
Cdd:NF037946   77 -----EGGFGF---DAFDVFSSFFETINKSGAFLDD 104
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-122 2.48e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 117.25  E-value: 2.48e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   2 ASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPS 81
Cdd:PRK14284    1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAE-AEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2172663945  82 RSETGGMEPGftftFRSPEEVFREFFGSGDPFSE-LFDDLGA 122
Cdd:PRK14284   80 GAGMGNMEDA----LRTFMGAFGGEFGGGGSFFEgLFGGLGE 117
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 4-110 3.10e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 116.82  E-value: 3.10e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSRS 83
Cdd:PRK14277    7 YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKE-AEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGGF 85

                          90       100
                  ....*....|....*....|....*...
gi 2172663945  84 ETGGM-EPGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14277   86 GQGGFgGGGFDFDFGGFGDIFEDIFGDF 113
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 4-132 5.90e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 115.66  E-value: 5.90e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRegltgAGSGPSRS 83
Cdd:PRK14282    6 YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGY-----VGEQPPYQ 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2172663945  84 ETGGMEPGFtftfrspEEVFREF--FGSGDPFSELFDDLGAFSELQNQGSR 132
Cdd:PRK14282   81 ETESGGGFF-------EDIFKDFenIFNRDIFDIFFGERRTQEEQREYARR 124
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 4-58 2.37e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.01  E-value: 2.37e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSD 58
Cdd:cd06257     2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-83 1.12e-27

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 102.10  E-value: 1.12e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGP 80
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDRELGQSGKGSASQP 83


                  ...
gi 2172663945  81 SRS 83
Cdd:COG2214    84 SAA 86
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 4-121 1.23e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 109.25  E-value: 1.23e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSRS 83
Cdd:PRK14290    5 YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNWD 84

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2172663945  84 EtggmepgFTFtFRSPEEVFREFFGsGDPFSELFDDLG 121
Cdd:PRK14290   85 N-------FTH-FSDINDIFNQIFG-GNFGSDFFSGFG 113
PRK14293 PRK14293
molecular chaperone DnaJ;
1-110 1.96e-27

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 108.92  E-value: 1.96e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDKnpdNKEF-AEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSG 79
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF 78

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2172663945  80 PsrsETGGMEpGFTFTFrspEEVFREFFGSG 110
Cdd:PRK14293   79 P---DMGDMG-GFADIF---ETFFSGFGGAG 102
PRK14280 PRK14280
molecular chaperone DnaJ;
4-112 2.52e-27

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 108.66  E-value: 2.52e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGA--GSGPS 81
Cdd:PRK14280    6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN--KEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGfgGGGFG 83

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2172663945  82 RSETGGmepGFTFtfrspEEVFREFFGSG----DP 112
Cdd:PRK14280   84 GGDFGG---GFGF-----EDIFSSFFGGGgrrrDP 110
PRK14297 PRK14297
molecular chaperone DnaJ;
1-110 5.30e-27

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 107.95  E-value: 5.30e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   1 MAS--YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGS 78
Cdd:PRK14297    1 MASkdYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKE-AEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGG 79

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2172663945  79 GPSrsetGGMEPGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14297   80 FGS----GGFGGFDFSDMGGFGDIFDSFFGGG 107
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 3-110 6.07e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 107.77  E-value: 6.07e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSR 82
Cdd:PRK14286    5 SYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKE-SEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQ 83

                          90       100
                  ....*....|....*....|....*...
gi 2172663945  83 setgGMEPGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14286   84 ----GAYTDFSDIFGDFGDIFGDFFGGG 107
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 4-117 4.52e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 105.32  E-value: 4.52e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAgsgpsrs 83
Cdd:PRK14298    7 YYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPD--AEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ------- 77

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2172663945  84 etggmepgftftfRSPEEVFR--EFFGSGDPFSELF 117
Cdd:PRK14298   78 -------------YSAEDIFRgaDFGGFGDIFEMFF 100
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 4-117 6.98e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 104.69  E-value: 6.98e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGagsgpsrs 83
Cdd:PRK14285    5 YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKE-AESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEG-------- 75

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2172663945  84 etGGMEPGFTFTFRSPEEVFREFfgsGDPFSELF 117
Cdd:PRK14285   76 --GGGFEGFSGGFSGFSDIFEDF---GDIFDSFF 104
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 4-63 2.79e-25

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 95.07  E-value: 2.79e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKRE 63
Cdd:COG5407     2 PYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPK-AEERFKEINEAYELLSDAEKRA 60
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 4-110 3.19e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 102.86  E-value: 3.19e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKN--PDnkefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGaGSGPS 81
Cdd:PRK14276    6 YYDRLGVSKDASQDEIKKAYRKLSKKYHPDINkePG----AEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANG-GFGGG 80

                          90       100
                  ....*....|....*....|....*....
gi 2172663945  82 RSETGGMEpGFTFtFRSPEEVFREFFGSG 110
Cdd:PRK14276   81 AGGFGGFD-GSGG-FGGFEDIFSSFFGGG 107
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 1-110 1.12e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 98.59  E-value: 1.12e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   1 MAS-YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDKHKREIYDrYGREGLTGAGSG 79
Cdd:PRK14278    1 MARdYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVD-LGGDPLESAGGG 77

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2172663945  80 PSrsetggmepGFTFTFRSPEEVFREFFGSG 110
Cdd:PRK14278   78 GG---------GFGGGFGGLGDVFEAFFGGG 99
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 4-122 1.45e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 96.93  E-value: 1.45e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSRS 83
Cdd:PRK14299    6 YYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPG--AEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPPG 83

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 2172663945  84 ETGGME-PGFTFTFRSpeEVFREFFGSGDPFSELFDDLGA 122
Cdd:PRK14299   84 PPGGGDfSGFNVGDFS--DFFQQLFGGRGGFGGFGDLFGS 121
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-110 8.93e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 96.11  E-value: 8.93e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDKHKREIYDRYGreglTGAGSGP 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFG----TAPGAGM 74

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2172663945  81 SRSET-GGMepGFtftfrSPEEVFREFFGSG 110
Cdd:PRK14292   75 PGGDPfGGM--GF-----DPMDIFEQLFGGA 98
PRK14279 PRK14279
molecular chaperone DnaJ;
4-117 9.97e-23

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 96.34  E-value: 9.97e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYgREGLTGAGSGPSRS 83
Cdd:PRK14279   11 FYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDPAKRKEYDET-RRLFAGGGFGGRRF 88

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2172663945  84 ETGGMEPGFTFTFRSPEEVFREFFGS---------GDPFSELF 117
Cdd:PRK14279   89 DGGGGFGGFGTGGDGAEFNLNDLFDAagrgggggiGDLFGGLF 131
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 4-132 1.33e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 95.66  E-value: 1.33e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAgsgpsrs 83
Cdd:PRK14283    7 YYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF------- 77

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2172663945  84 etggmepgftftfrSPEEVFRE------FFGSGDPFSELFDDLGaFSELQNQGSR 132
Cdd:PRK14283   78 --------------SQEDIFNNinfediFQGFGFGIGNIFDMFG-FGGGSRHGPQ 117
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-79 1.86e-22

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 95.66  E-value: 1.86e-22
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSG 79
Cdd:PTZ00037   30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQP 100
PRK14295 PRK14295
molecular chaperone DnaJ;
4-136 2.14e-21

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 92.60  E-value: 2.14e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDrygrEGLTGAGSGPSRS 83
Cdd:PRK14295   11 YYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDEKKRKEYD----EARSLFGNGGFRP 85

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2172663945  84 ETGGMEPGfTFTFRspeevFREFFGSGDP------FSELFDDLgaFSELQNQGSRLTGP 136
Cdd:PRK14295   86 GPGGGGGG-GFNFD-----LGDLFGGGAQggggagGGGGLGDV--FGGLFNRGGRRTQP 136
PRK14288 PRK14288
molecular chaperone DnaJ;
3-125 1.50e-20

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 89.75  E-value: 1.50e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   3 SYYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSr 82
Cdd:PRK14288    4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKE-AEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS- 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2172663945  83 setggmepgftftfrspeevfreffgsgdPFSELFDDLGAFSE 125
Cdd:PRK14288   82 -----------------------------DFSDFFEDLGSFFE 95
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 4-110 5.99e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 88.15  E-value: 5.99e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDkNPDNKEfAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSGPSRS 83
Cdd:PRK14300    5 YYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKD-AEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGG 82

                          90       100
                  ....*....|....*....|....*..
gi 2172663945  84 ETGGMEPGFTFTFrspEEVFREFFGSG 110
Cdd:PRK14300   83 NHGGFHPDINDIF---GDFFSDFMGGS 106
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 4-110 1.68e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 84.23  E-value: 1.68e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAgSGPSrS 83
Cdd:PRK14296    6 YYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPD--AHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGS-SGFS-S 81

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2172663945  84 ETGGMEPGFT----FTFRSPEEVFREFFGSG 110
Cdd:PRK14296   82 NFGDFEDLFSnmgsSGFSSFTNIFSDFFGSN 112
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 4-119 2.74e-18

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 84.48  E-value: 2.74e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKefAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGagsgpsrs 83
Cdd:TIGR03835   4 YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPD--AASIFAEINEANDVLSNPKKRANYDKYGHDGVDR-------- 73

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2172663945  84 etggmEPGFTFTfrspEEVFREFF---GSGDPFSELFDD 119
Cdd:TIGR03835  74 -----EDDFDFQ----ADVFNSFFeeiNKSGEFDNITDD 103
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 4-110 1.33e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 81.59  E-value: 1.33e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNpdNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGR----EGLTGAGSG 79
Cdd:PRK14287    6 YYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHtdpnQGFGGGGAG 83

                          90       100       110
                  ....*....|....*....|....*....|.
gi 2172663945  80 psrsetggmepgftfTFRSPEEVFREFFGSG 110
Cdd:PRK14287   84 ---------------DFGGFSDIFDMFFGGG 99
PRK10266 PRK10266
curved DNA-binding protein;
4-78 1.25e-13

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 69.46  E-value: 1.25e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945   4 YYEILDVPRSASPDDIKKAYRKKALQWHPD--KNPDnkefAEKKFKEVAEAYEVLSDKHKREIYD---------RYGREG 72
Cdd:PRK10266    6 YYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDqlwqhrndpQFNRQF 81


                  ....*.
gi 2172663945  73 LTGAGS 78
Cdd:PRK10266   82 QHGDGQ 87
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 1.35e-13

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 64.43  E-value: 1.35e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2172663945   1 MASYYEILDVPRSASPDDIKKAYRKKALQWHPDK-----NPDNKEFAEKKFKEVAEAYEVLSDKHKREI 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-109 2.22e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 64.04  E-value: 2.22e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2172663945    4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFaeKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGAGSgpsrs 83
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGF--HKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVNF----- 647

                           90       100
                   ....*....|....*....|....*.
gi 2172663945   84 etggMEPGFTFTFRSPEEvFREFFGS 109
Cdd:PTZ00341   648 ----IHPSIFYLLASLEK-FADFTGS 668
PHA03102 PHA03102
Small T antigen; Reviewed
 6-58 2.13e-06

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 46.59  E-value: 2.13e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2172663945   6 EILDVPRSASPD--DIKKAYRKKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSD 58
Cdd:PHA03102    9 DLLGLPRSAWGNlpLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRE 58
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 9.15e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 46.56  E-value: 9.15e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2172663945   2 ASYYEILDVPR---SASPDDIKKAYRKKALQWHPDK-----NPDNKEFaekkFKEVAEAYEVLSDKHKREIYD 66
Cdd:COG5269    43 VDLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKtaaggNKGCDEF----FKLIQKAREVLGDRKLRLQYD 111
djlA PRK09430
co-chaperone DjlA;
5-56 3.38e-05

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 44.42  E-value: 3.38e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2172663945   5 YEILDVPRSASPDDIKKAYRKKALQWHPDK------NPDNKEFAEKKFKEVAEAYEVL 56
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
PHA02624 PHA02624
large T antigen; Provisional
 6-58 4.23e-05

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 44.59  E-value: 4.23e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2172663945   6 EILDVPRSA--SPDDIKKAYRKKALQWHPDKNPDnkefaEKKFKEVAEAYEVLSD 58
Cdd:PHA02624   15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQE 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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