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Conserved domains on  [gi|302148518|ref|NP_003049|]
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solute carrier family 22 member 2 [Homo sapiens]

Protein Classification

MFS transporter( domain architecture ID 11489935)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
13-525 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 638.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518   13 GEFHFFQKQMFFLLALLSATFAPIYVGIVFLGFTPDHRCRSPGVAELSLRCgwspaeELNYTVPGPGPAGeasPRQCRRY 92
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRC------ELNLTLPRLPDGR---PESCLRF 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518   93 EVD-WNQSTFDCVDPLASLDTNRSRLPLGPCRDGWVYETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIA 171
Cdd:TIGR00898  72 MVDqWANPSLLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLS 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  172 DRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLV 251
Cdd:TIGR00898 152 DRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  252 LAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMRIIKHIAKKNGKSLPASLQRLRLEEE-TGKK 330
Cdd:TIGR00898 232 LPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDlSSSK 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  331 LNPSFLDLVRTPQIRKHTMILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAAS 410
Cdd:TIGR00898 312 KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAAS 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  411 NMVAGAACLASVFIPGDLQWLKIIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYrLTN 490
Cdd:TIGR00898 392 LLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE 470
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 302148518  491 IWLELPLMVFGVLGLVAGGLVLLLPETKGKALPET 525
Cdd:TIGR00898 471 KWLFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
 
Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
13-525 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 638.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518   13 GEFHFFQKQMFFLLALLSATFAPIYVGIVFLGFTPDHRCRSPGVAELSLRCgwspaeELNYTVPGPGPAGeasPRQCRRY 92
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRC------ELNLTLPRLPDGR---PESCLRF 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518   93 EVD-WNQSTFDCVDPLASLDTNRSRLPLGPCRDGWVYETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIA 171
Cdd:TIGR00898  72 MVDqWANPSLLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLS 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  172 DRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLV 251
Cdd:TIGR00898 152 DRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  252 LAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMRIIKHIAKKNGKSLPASLQRLRLEEE-TGKK 330
Cdd:TIGR00898 232 LPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDlSSSK 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  331 LNPSFLDLVRTPQIRKHTMILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAAS 410
Cdd:TIGR00898 312 KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAAS 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  411 NMVAGAACLASVFIPGDLQWLKIIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYrLTN 490
Cdd:TIGR00898 392 LLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE 470
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 302148518  491 IWLELPLMVFGVLGLVAGGLVLLLPETKGKALPET 525
Cdd:TIGR00898 471 KWLFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
115-500 0e+00

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 585.85  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 115 SRLPLGPCRDGWVYETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLM 194
Cdd:cd17379    1 SMLPLSPCQDGWVYNTPRSSIVTEFNLVCEDAWKLDLFQSSLNLGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 195 AISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNF 274
Cdd:cd17379   81 AFSPNYPWFLIFRFLQGLFGKGGWMTGYVLVTEFVGSKYRRTVGIVYQMFFTLGLLILPGIAYFIPHWRWLQLAVTLPNF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 275 FFLLYYWCIPesprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYN 354
Cdd:cd17379  161 LFLLYYWFIP-------------------------------------------------------------KHTFILMYA 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 355 WFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKII 434
Cdd:cd17379  180 WFTSAVVYQGLIMRLGITGGNLYLDFFISALVELPAAFIILLTIDRIGRRLPFAASNIVAGAACLITAFIPPDLHWLKTT 259
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 302148518 435 ISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVF 500
Cdd:cd17379  260 IACVGRLGITMAFEIVCLVNTELYPTFLRNLGVSVCSSLCDIGGIIAPFLLYRLAEIWLELPLIVF 325
Sugar_tr pfam00083
Sugar (and other) transporter;
151-532 1.07e-28

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 118.91  E-value: 1.07e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  151 LFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYT--WMLIF-RLIQGLvskaGWLIGYILITE 227
Cdd:pfam00083  50 LIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKGKWsvYQLIVgRVLVGI----GVGGASVLAPM 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  228 FVGR----RYRRTVGIFYQVAYTVGLLVLAGVAYALPH------WRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNA 297
Cdd:pfam00083 126 YISEiapkKLRGALGSLYQLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLE 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  298 EAMRIikhIAKKNGKSLP-ASLQRLRLEEETGKKLNPSFLD-LVRTPQIRKH-TMILMYNWFT------SSVLYQGLIMH 368
Cdd:pfam00083 206 EAREV---LAKLRGVPDVdRELDEIKDSLEAGQEAEKASWKeLFSTKTRRQRlLIGVMLQIFQqltginAIFYYSTTIFE 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  369 MGLAGDNIYLDFFYSAlVEFPAAFMIILTIDRIGRRYP--WAASNMVAGAACLASVFIPG-DLQWLKIIISCLGRMGITM 445
Cdd:pfam00083 283 NLGLSDSFLVTIIVGV-VNFVFTFIAIFLVDRFGRRPLllLGAAGMAICFVILGIVALLGvSKSDWAGIVAIVFIALFIA 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  446 AYE-----IVCLVNAELYPTFIRNLGVhICSSMCD-----IGGIITPFLVYRLTNIWLELPLMVFgvLGLVAGGLVLLLP 515
Cdd:pfam00083 362 FFAmgwgpVPWVIVSELFPLSVRSKAM-ALATAANwlanfLIGFLFPIITDAIGLGYTFFIFAGL--LVLFIIFVFFFVP 438
                         410
                  ....*....|....*..
gi 302148518  516 ETKGKalpeTIEEAENM 532
Cdd:pfam00083 439 ETKGR----TLEEIDEL 451
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
133-478 1.59e-18

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 86.95  E-value: 1.59e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 133 SSIVTEFNlvcANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGL 212
Cdd:COG2814   34 PLIAADLG---ASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGL 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 213 VSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLV---LAGVAYALPHWRWLQFTVSLPNFFFLLY-YWCIPESPR 288
Cdd:COG2814  111 GAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALgplLGGLLADLFGWRWVFLVNAVLALLALLLlLRLLPESRP 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 289 wlisqnknaeamriikhiakkngkslpaslqrlrleeETGKKLNPSFLDLVRTPQIRKHT------MILMYNWFTSSVLY 362
Cdd:COG2814  191 -------------------------------------AARARLRGSLRELLRRPRLLLLLllafllGFGFFALFTYLPLY 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 363 qgLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGdlQWLKIIISCLGRMG 442
Cdd:COG2814  234 --LQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGS--LWLLLLALFLLGFG 309
                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 302148518 443 ITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGG 478
Cdd:COG2814  310 FGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
xylE PRK10077
D-xylose transporter XylE; Provisional
144-469 3.12e-14

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 75.11  E-value: 3.12e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 144 ANSWmLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTtvlinaaAGVLMAIS----------------PTYTWML--- 204
Cdd:PRK10077  53 ANSL-LGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLFFISalgsawpefgftsigpDNTGYVPefv 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 205 IFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH-----------WRWLQFTVSLPN 273
Cdd:PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARsgdaswlntdgWRYMFASEAIPA 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 274 FFFLLYYWCIPESPRWLISQNKNAEAMRIIKHIakkNGKSLPASL-----QRLRLEEETGKKLnPSFLDLVrtpqIRKHT 348
Cdd:PRK10077 205 LLFLMLLYFVPETPRYLMSRGKQEQAEGILRKI---MGNTLATQAlqeikHSLDHGRKTGGKL-LMFGVGV----IVIGV 276
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 349 MILMYNWFT--SSVLYQG--LIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRyPW---AASNMVAGAACLAS 421
Cdd:PRK10077 277 MLSVFQQFVgiNVVLYYApeIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-PLqiiGALGMAIGMFSLGT 355
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 302148518 422 VF---IPGDLQWLKIIISCLGRMgitMAYEIVCLV-NAELYPTFIRNLGVHI 469
Cdd:PRK10077 356 AFytqAPGIVALLSMLFYVAAFA---MSWGPVCWVlLSEIFPNAIRGKALAI 404
 
Name Accession Description Interval E-value
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
13-525 0e+00

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 638.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518   13 GEFHFFQKQMFFLLALLSATFAPIYVGIVFLGFTPDHRCRSPGVAELSLRCgwspaeELNYTVPGPGPAGeasPRQCRRY 92
Cdd:TIGR00898   1 GEFGPFQRRTFLLLALPIALLAFHFVLIVFLGATPEHHCRLPDAANLSSRC------ELNLTLPRLPDGR---PESCLRF 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518   93 EVD-WNQSTFDCVDPLASLDTNRSRLPLGPCRDGWVYETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIA 171
Cdd:TIGR00898  72 MVDqWANPSLLGCEPLKLSDLGLAATEPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLS 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  172 DRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLV 251
Cdd:TIGR00898 152 DRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  252 LAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMRIIKHIAKKNGKSLPASLQRLRLEEE-TGKK 330
Cdd:TIGR00898 232 LPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDlSSSK 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  331 LNPSFLDLVRTPQIRKHTMILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAAS 410
Cdd:TIGR00898 312 KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAAS 391
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  411 NMVAGAACLASVFIPGDLQWLKIIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYrLTN 490
Cdd:TIGR00898 392 LLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE 470
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 302148518  491 IWLELPLMVFGVLGLVAGGLVLLLPETKGKALPET 525
Cdd:TIGR00898 471 KWLFLPLVLFGGLALLAGILTLFLPETKGVPLPET 505
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
115-500 0e+00

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 585.85  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 115 SRLPLGPCRDGWVYETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLM 194
Cdd:cd17379    1 SMLPLSPCQDGWVYNTPRSSIVTEFNLVCEDAWKLDLFQSSLNLGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 195 AISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNF 274
Cdd:cd17379   81 AFSPNYPWFLIFRFLQGLFGKGGWMTGYVLVTEFVGSKYRRTVGIVYQMFFTLGLLILPGIAYFIPHWRWLQLAVTLPNF 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 275 FFLLYYWCIPesprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYN 354
Cdd:cd17379  161 LFLLYYWFIP-------------------------------------------------------------KHTFILMYA 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 355 WFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKII 434
Cdd:cd17379  180 WFTSAVVYQGLIMRLGITGGNLYLDFFISALVELPAAFIILLTIDRIGRRLPFAASNIVAGAACLITAFIPPDLHWLKTT 259
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 302148518 435 ISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVF 500
Cdd:cd17379  260 IACVGRLGITMAFEIVCLVNTELYPTFLRNLGVSVCSSLCDIGGIIAPFLLYRLAEIWLELPLIVF 325
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
124-500 1.96e-104

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 317.21  E-value: 1.96e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 124 DGWVYETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWM 203
Cdd:cd17317    2 WEFDYSVSESTIVTEWDLVCDRDWLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELF 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 204 LIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCI 283
Cdd:cd17317   82 LVLRFLVGVTSAGIFTVGFVLGMEIVGPKYRSFVGILFGLFWALGYMLLALLAYLIRDWRWLQLAISLPGLLFLLLLWWL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 284 PesprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFTSSVLYQ 363
Cdd:cd17317  162 P-------------------------------------------------------------RRTIIVGLIWFVTSLVYY 180
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 364 GLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISCLGRMGI 443
Cdd:cd17317  181 GLSLNSSNLGGNLYLNFFLSGLVEIPAYFLALLLLDRLGRRWTLSGSLLLAGLACLVTALLPDDENTLALTLALVGKFAI 260
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 302148518 444 TMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYrLTNIWLELPLMVF 500
Cdd:cd17317  261 SAAFSVIYLYTAELYPTVVRNTGVGLCSTVARVGAILAPFIVL-LGKIGPLLPLIIF 316
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
121-500 2.76e-63

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 210.74  E-value: 2.76e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 121 PCRDGWVY---ETPgSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAIS 197
Cdd:cd17446    5 PCTDGWVYdksEFP-STIITEWDLVCNHRALRQLAQSIYMAGVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTCAAFS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 198 PTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFL 277
Cdd:cd17446   84 PSFPIYCVFRFLTGMALSGIVLNSVSLNVEWMPTRVRAVVGTLLGYCYTLGQLILAGVAYAIRDWRWLQLAVSLPFFIFF 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 278 LYYWCIPesprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFT 357
Cdd:cd17446  164 LYSWWFP-------------------------------------------------------------RITFCLSLVWFS 182
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 358 SSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISC 437
Cdd:cd17446  183 TSFAYYGLAMDLQKFGVSIYLIQIIFGAVDIPAKFISTLTMSYLGRRPTQAAALILAGIMILANIFVPQDLQTVRTALAV 262
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 302148518 438 LGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPfLVYRLTNIWLELPLMVF 500
Cdd:cd17446  263 FGKGCLAASFNCVYLYTGELYPTVIRQTGMGLGSTMARLGGIVAP-LVKMLGEYYPFLPLIIY 324
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
121-500 2.26e-62

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 208.30  E-value: 2.26e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 121 PCRDGWVYETP--GSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISP 198
Cdd:cd17374    7 PCVDGWVYDRSkfTSTIVTEWDLVCESQSLKSVAQSIFMAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAP 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 199 TYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLL 278
Cdd:cd17374   87 TFPVYCVLRFLAGFAVSGISINTLILGTEWTTPRHRALAITLTSCFFSIGQMLLAGLAYAIRDWRLLQLVVSVPFFLFFL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 279 YYWCIPesprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFTS 358
Cdd:cd17374  167 YSWWLP-------------------------------------------------------------KRTLILSFVWFAN 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 359 SVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISCL 438
Cdd:cd17374  186 SFSYYGLSLDLQHLGLNVFLLQFLFGAVEVPARCLALFLLNHMGRRISQAVLLLLAGLCILANIFVPQEMQTLRTVLAVL 265
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 302148518 439 GRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPfLVYRLTNIWLELPLMVF 500
Cdd:cd17374  266 GKGSSAAAFTISYVYTAELFPTVLRQTGMGLNSMFARIGGILAP-LIMLLGVYSPLLPMIIY 326
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
115-486 2.16e-48

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 171.11  E-value: 2.16e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 115 SRLPLGPCRDGWVY--ETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGV 192
Cdd:cd17376    1 TQIEQEPCLDGWEYsqDVYLSTIVTEWNLVCEDDWKVPLTTSLFFVGVLLGSFISGQLSDRFGRKKVLFATMAVQTGFSF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 193 LMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYR---RTVGIFyqVAYTVGLLVLAGVAYALPHWRWLQFTV 269
Cdd:cd17376   81 LQIFSPSWEMFTVLFVIVGMGQISNYVVAFVLGTEILGKSVRilfSTLGVC--IFYAIGYMLLPLFAYFIRDWRMLLLAL 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 270 SLPNFFFLLYYWCIPESprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirkhTM 349
Cdd:cd17376  159 TLPGVLCVPLWWFIPIT-------------------------------------------------------------TI 177
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 350 ILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQ 429
Cdd:cd17376  178 MSLLLWMAISVGYFGLSLNTPNLHGDPYLNCFLSAVIEVPAYIIAWLLLRSLPRRYSIAATLVLGGGVLLFIQLVPTDLQ 257
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 302148518 430 WLKIIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVY 486
Cdd:cd17376  258 VLATALVMLGKFGITAAFSMVYVYTAELYPTVVRNMGVGVCSTASRIGSIISPYFVY 314
MFS_SLC22A16_CT2 cd17375
Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major ...
121-500 1.37e-47

Solute carrier family 22 member 16 (also called Carnitine transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 16 (SLC22A16) is also called carnitine transporter 2 (CT2), fly-like putative transporter 2 (FLIPT2), organic cation transporter OKB1, or organic cation/carnitine transporter 6 (OCT6). It is a partially sodium-ion dependent high affinity carnitine transporter. It also transports organic cations such as tetraethylammonium (TEA) and doxorubicin. It is one of several organic cation transporters (OCTs) that falls into the SLC22 (solute carrier 22) family. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. SLC22A16 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340933 [Multi-domain]  Cd Length: 341  Bit Score: 169.16  E-value: 1.37e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 121 PCRDGWVYE--TPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISP 198
Cdd:cd17375    7 SCSDGFVYDqsKWESSIVTDWDLVCDREWLAKLIQPIFMLGVLLGAVIFGDIADRIGRRPVLWFTSTGQFVFGIAVAFTF 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 199 TYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLL 278
Cdd:cd17375   87 DYYSFVIVRFLLAMVSSGYLVVVFVYVTEFTGIKARTWASMHVHAFFAVGIMVVALVGYLVRTWWIYQIILSLVTIPFIL 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 279 YYWCIPesprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFTS 358
Cdd:cd17375  167 CCWMLP-------------------------------------------------------------KRTITVWLIWFTG 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 359 SVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISCL 438
Cdd:cd17375  186 SLGYYVFSLGSVNLGGNEYLNLFLVGAVEIPSYIIACIGMDKLGRRNTLAPFLLLSALACMLIMVIPQDYEVLTIVLSMT 265
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 302148518 439 GRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYrLTNIWLELPLMVF 500
Cdd:cd17375  266 GKFAIAIAFGLIYLYTAELYPTIVRSLAVGSGSMMCRVGSVVAPFCVY-LSDVWIFLPQLLV 326
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
133-500 4.61e-44

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 159.94  E-value: 4.61e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 133 SSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGL 212
Cdd:cd17377   25 TSIVSEWFLVGNAAYKVSLASSFFFAGVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFAVSRFLVGV 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 213 VSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPesprwlis 292
Cdd:cd17377  105 MNGGMSLVAFVLLNECVGKSYWALAGSLGGLFFAVGIAQYALLGYFIRSWRTLAVVVNLQGTLVFLLSLFIP-------- 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 293 qnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFTSSVLYQGLIMHMGLA 372
Cdd:cd17377  177 -----------------------------------------------------GRTLILMYVWFVCSLVYYGLTLNAGDL 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 373 GDNIYLDFFYSALVEFPAAFMIILTID--RIGRRYPWAASNMVAGAACLASVFIP--GDLQWLKII----ISCLGRMGIT 444
Cdd:cd17377  204 GGNIYLNLALSGLVELPAYPLCIYLINqkWSGRRRTLAGFLFLGGIACLLVMFVPekKDSGVFAVVnstsLSLLGKLTIS 283
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 302148518 445 MAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFlVYRLTNIWLELPLMVF 500
Cdd:cd17377  284 AAFNIVYIYTSELYPTVVRNAGLGVCSMFSRVGGIIAPF-IPSLKSVQWSLPFIVF 338
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
115-500 5.42e-42

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 153.73  E-value: 5.42e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 115 SRLPLGPCRDGWVYE--TPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGV 192
Cdd:cd17447    1 SDLPVVPCQNGWVYDhsTFSSTIATEWDLVCDRKGLNQATATFFFAGVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 193 LMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLP 272
Cdd:cd17447   81 ASAFSVSYVMFAITRTLTGFALTGFSIISMVLCVEWVDIEHRTVAGVLISLFWTVGNMLLALVAYLIRDWRWLILAVTLP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 273 NFFFLLYYWCIPesprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILM 352
Cdd:cd17447  161 CAPGIITWWWVP-------------------------------------------------------------KISLCTG 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 353 YNWFTSSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLK 432
Cdd:cd17447  180 IVWFGVAFTYYGISFNISGFGLNVYLTQFIYGAIELPAKLLAYLLLDRIGRRLTQAGSLILTGLSIGINILIPSEFTVVR 259
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 302148518 433 IIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPfLVYRLTNIWLELPLMVF 500
Cdd:cd17447  260 TVIAVLGKGFSEAAFTTVFLYTSELYPTVLRQNGMGYTSFIARLGGSLAP-LVILLDDVWLSLPQVIF 326
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
131-485 1.87e-38

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 144.04  E-value: 1.87e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 131 PGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIAD-RFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLI 209
Cdd:cd17378   17 SKVSIVSEWGLICAGSFLVGLPQSSFFVGCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWVYAFLRFL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 210 QGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAY-ALPHWRWLQFTVSLPNFFFLLyywCIPESPR 288
Cdd:cd17378   97 TGFGRSGIGTCALVLATEPVGPKWRGQVGMSTFFFFVLGFMSLPGIAYlNGSSWRVLYFWTSIPALIYCI---LVYLFAR 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 289 WLIsqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirkhtmILMYNWFTSSVLYQGLIMH 368
Cdd:cd17378  174 RLL----------------------------------------------------------AVMVIGFGIGMVYYGIPLA 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 369 MGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQ-WLKIIISCLGRMGITMAY 447
Cdd:cd17378  196 VGNLKFNIYLSVALNALSELPAFVITAFLLDRFGRRPSLLGFTLLSGASCLLCFVLSIGGTtSLQIALELVGFFGAAGAF 275
                        330       340       350
                 ....*....|....*....|....*....|....*...
gi 302148518 448 EIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLV 485
Cdd:cd17378  276 NLLYIYTVELFPTCVRNAALGMLRQALVVGGIFAPFIV 313
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
133-485 4.83e-29

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 118.09  E-value: 4.83e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 133 SSIVTEFNLVCANSWMLDLFqSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGL 212
Cdd:cd17316   23 PVLAAEFSLGLSLLQTGLLF-AAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGI 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 213 VSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH-------WRWLQFTVSLPNFFFLLyywcipe 285
Cdd:cd17316  102 GIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPllsgdwgWRILFLIGALPALLALL------- 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 286 sprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqIRKHTMILMYNWFTSSVLYQGL 365
Cdd:cd17316  175 ----------------------------------------------------------LRRRTLLLILLWFFISFGYYGL 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 366 I--------MHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRyPWAASNMVAGAACLASVFIPGDLQ-WLKIIIS 436
Cdd:cd17316  197 TtflptylqTVLGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRK-KTLVIGLILSGILALPLFYLLSGSpTLLLLLL 275
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 302148518 437 CLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLV 485
Cdd:cd17316  276 FILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGAPPLI 324
Sugar_tr pfam00083
Sugar (and other) transporter;
151-532 1.07e-28

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 118.91  E-value: 1.07e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  151 LFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYT--WMLIF-RLIQGLvskaGWLIGYILITE 227
Cdd:pfam00083  50 LIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVIGAVLQGAAKGKWsvYQLIVgRVLVGI----GVGGASVLAPM 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  228 FVGR----RYRRTVGIFYQVAYTVGLLVLAGVAYALPH------WRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNA 297
Cdd:pfam00083 126 YISEiapkKLRGALGSLYQLAITFGILLAYIFGLGLNKtsnsdgWRIPLGLQLVPALLLIIGLLFLPESPRWLVEKGRLE 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  298 EAMRIikhIAKKNGKSLP-ASLQRLRLEEETGKKLNPSFLD-LVRTPQIRKH-TMILMYNWFT------SSVLYQGLIMH 368
Cdd:pfam00083 206 EAREV---LAKLRGVPDVdRELDEIKDSLEAGQEAEKASWKeLFSTKTRRQRlLIGVMLQIFQqltginAIFYYSTTIFE 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  369 MGLAGDNIYLDFFYSAlVEFPAAFMIILTIDRIGRRYP--WAASNMVAGAACLASVFIPG-DLQWLKIIISCLGRMGITM 445
Cdd:pfam00083 283 NLGLSDSFLVTIIVGV-VNFVFTFIAIFLVDRFGRRPLllLGAAGMAICFVILGIVALLGvSKSDWAGIVAIVFIALFIA 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  446 AYE-----IVCLVNAELYPTFIRNLGVhICSSMCD-----IGGIITPFLVYRLTNIWLELPLMVFgvLGLVAGGLVLLLP 515
Cdd:pfam00083 362 FFAmgwgpVPWVIVSELFPLSVRSKAM-ALATAANwlanfLIGFLFPIITDAIGLGYTFFIFAGL--LVLFIIFVFFFVP 438
                         410
                  ....*....|....*..
gi 302148518  516 ETKGKalpeTIEEAENM 532
Cdd:pfam00083 439 ETKGR----TLEEIDEL 451
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
146-524 4.08e-28

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 116.91  E-value: 4.08e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 146 SWmldlFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILI 225
Cdd:cd17358   44 SW----FGSLLTLGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVVPVYI 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 226 TEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPhWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMRIIKH 305
Cdd:cd17358  120 AEIAPKNVRGALGSLNQLLVNIGILLGYVLGSFLP-WRTLALIGAIPPVVFLILLFFIPESPRWLAKKGREEEAEKSLQF 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 306 IAKKNGKSLPASLQRLRLEEETGKKLNPSFLDLVRTPQIRKHTMILMynwftssvlyqGLIMHMGLAGDNIYLdfFYS-- 383
Cdd:cd17358  199 LRGKDADISKEAAEIQEELAELEKEAKESSFSDLFQRKYLKPLVIGL-----------GLMLFQQLSGINAVI--FYAss 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 384 ------------------ALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLA---SVFIPGDLQWLK---------- 432
Cdd:cd17358  266 ifdeagsgldpntatiiiGVVQVVGTLVATLLVDRLGRRPLLLVSAIGMGIGLLAlglYFYLQEHGALLSsvswlplvgl 345
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 433 ---IIISCLGRMGITMayeivcLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRLTNIW-LELPLMVFGVLGLVAG 508
Cdd:cd17358  346 viyIISFSIGLGPLPW------VIMSEIFPAKIKGLAGSLVTLVNWLFAFIVTKTFPFLTLAWgASGTFWIFAGICGLAL 419
                        410
                 ....*....|....*..
gi 302148518 509 G-LVLLLPETKGKALPE 524
Cdd:cd17358  420 VfVLLFVPETKGKSLEE 436
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
146-500 6.85e-28

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 114.94  E-value: 6.85e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 146 SWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLvSKAGWLIGYILI 225
Cdd:cd17372   33 AWQVALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYMWLIILRCLVGL-GLGGGPQLASWY 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 226 TEFVGRRYRRTVGIFYQVAYTVGLLVLAGVA-YALPH--WRWLQFTVSLPNFFFLLYYWCIPesprwlisqnknaeamri 302
Cdd:cd17372  112 LEFLPAKSRGTWMVLFSVFWTVGTIFEASLAwLVMPRlgWRWLLAFSSVPSSLLLVFYRWTP------------------ 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 303 ikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFTSSVLYQGLIM--------------- 367
Cdd:cd17372  174 -------------------------------------------KTTLLLWVIWFGNAFAYYGVVLlttelnnshnvcgsk 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 368 ------------HMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPwAASNMVAGAACLASVFIPGDLQWLkIII 435
Cdd:cd17372  211 sdsdsgesptekQCRNSNDVDYRDVFIATFAEFPGLLISAAMIDRLGRKAS-MASMLFTCCIFLLLLLICQSPFIL-TVL 288
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 436 SCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVF 500
Cdd:cd17372  289 LFGGRACISAAFTVVYIYTPEVYPTAVRALGVGTGSSVGRIGAILCPFIAQVLVHGSQTIALLLF 353
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
133-485 2.77e-24

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 104.69  E-value: 2.77e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 133 SSIVTEFNLVCANSWMLdlfQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGL 212
Cdd:cd17371   23 PALIAEFGLDEAEAGLL---GTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRALAGL 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 213 VSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYAL-PH------WRWLQFTVSLPNFFFLLYYWCIPE 285
Cdd:cd17371  100 GFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLfPLlppeiaWRVLFLLGALPALLVLFIRRFVKE 179
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 286 SPRWLISQNKNAEamriikhiakkngkslpaslqrlrleeetgkKLNPSFLDLVRTPQIRKHTMI--------LMYNWFT 357
Cdd:cd17371  180 PPQWQAARAARRH-------------------------------FADRPSLRELFSPPLLRTTLLasllatgaLGGYYGI 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 358 SSVLYQGL--IMHMGLAGDNIYLDFFYSA--LVEFPAAFMiiltIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKI 433
Cdd:cd17371  229 TTWLPSYLtgERGLSFEGSAGYLVVTILGgfLGYLAGGFL----ADRIGRRNNFALFALGSAISILLYFFLPLSPTLILI 304
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 302148518 434 IISCLGrMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLV 485
Cdd:cd17371  305 LGFPLG-FFASGPFSGMGAYLTELFPTAVRATAQGFCYNVGRIIGALFPFLV 355
SP TIGR00879
MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of ...
137-480 2.80e-23

MFS transporter, sugar porter (SP) family; This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273317 [Multi-domain]  Cd Length: 481  Bit Score: 103.19  E-value: 2.80e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  137 TEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPT---YTWMLIFRLIQGLv 213
Cdd:TIGR00879  61 TSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFalsVEMLIVGRVLLGI- 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  214 skaGWLIGYIL----ITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYAL------PHWRWLQFTVSLPNFFFLLYYWCI 283
Cdd:TIGR00879 140 ---GVGIASALvpmyLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKvslnntLGWRIPLGLQLIPAGLLFLGLFFL 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  284 PESPRWLISQNKNAEAMRIIKHIAKKNGK------SLPASLQRLRLEEETGKKLNPSFLDLVRTpQIRKHTMILMYNWFT 357
Cdd:TIGR00879 217 PESPRWLVGKGRVEEARKSLARLRGTSGEdkelldELELIDIKRSIEKRSVQPSWGSLFSSTRR-IRRRLFLGVVLQWFQ 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  358 -----SSVLYQGLIM--HMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYP--WAASNMVAGAACLASVFIPGDL 428
Cdd:TIGR00879 296 qftgiNAIMYYSPTIfeNAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLllIGAAGMAICLFVLGILGASFVT 375
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 302148518  429 QWLK----IIISCLgrMGITMAYE-----IVCLVNAELYPTFIRNLGVHICSSMCDIGGII 480
Cdd:TIGR00879 376 GSSKssgnVAIVFI--LLFIAFFAmgwgpVPWVIVSEIFPLSLRPKGISIAVAANWLANFI 434
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
149-520 5.03e-23

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 101.95  E-value: 5.03e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 149 LDLFQSSVN----VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLM--AISPTYTWMLIF-RLIQGLVSKAGWLIG 221
Cdd:cd17357   47 LDLLWSLIVsiffIGGAIGSFISAFLANRFGRKNGLLISNALLVVSSLLMflSKSAKSPELLIFgRFLVGIACGLSTGFV 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 222 YILITEFVGRRYRRTVGIFYQVAYTVGLLV--LAGVAYAL---PHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKN 296
Cdd:cd17357  127 PMYLQEISPSELRGALGSLTQIGVTLGILLgqVFGLPSVLgteTLWPYLLFFPGIPALLQLAALPFFPESPKFLLISKGD 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 297 AEAmrIIKHIAKKNGKSLPA--SLQRLRLEEET-GKKLNPSFLDLVRTPQIRKHTMILMYnwFTSSVLYQG--------- 364
Cdd:cd17357  207 EEE--AEKSLKFLRGIEDDVdqELEEIKKESEQmGDQKQVSLMQLLRDPSLRLPLLLVLV--VSASQQFSGinaiffyst 282
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 365 -LIMHMGL-AGDNIYLDFFYSaLVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLA---SVFIPGDLQWLKII-ISCL 438
Cdd:cd17357  283 fIFENAGFsPQLAEWANLGIG-IVNVLSTIVGPFLIEKVGRRPLLLISLSVCAVALLLmsvFLFLSEQNSWMSYGcIVAI 361
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 439 grMGITMAYEIVC-----LVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVFGVLGLVAGGLVLL 513
Cdd:cd17357  362 --FLFIFFFAIGLgpipwFIGAELFPQAPRSAAQSLGSSVNWTSNFIVGMAFPPLQSIGGGFVFIIFAIPCALFLLYLYR 439

                 ....*...
gi 302148518 514 L-PETKGK 520
Cdd:cd17357  440 YlPETKGR 447
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
146-500 3.99e-20

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 92.18  E-value: 3.99e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 146 SWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRliqGLVskaGWLIGYI-- 223
Cdd:cd17441   33 SWQVALLTSVVFIGMMLSSSLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPIYSWILVLR---GLV---GFGIGGVpq 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 224 ---LITEFVGRRYRRTVGIFYQVAYTVGL---LVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPRWlisqnkna 297
Cdd:cd17441  107 svtLYAEFLPMKSRAKCILLIEVFWALGTvfeVLLAVFVMPTLGWRWLLILSALPLLIFAVLCFWLPESARY-------- 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 298 eamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFTSSVLYQGLIM---HMGLAGD 374
Cdd:cd17441  179 ------------------------------------------------WTTILLWFIWFSNAFSYYGLVLlttELFQAGD 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 375 -----------------------NIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLasvfipgdlqwl 431
Cdd:cd17441  211 vcsgssgkkvegkcsleceylttSDYMDLLWTTLSEFPGLLVTLWIIDRFGRKKTMALCFFVFSFCTL------------ 278
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 432 kIIISCLGRMGITM-----------AYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVF 500
Cdd:cd17441  279 -LLFSCVGRFSLTVllfiarafisgGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTLSVY 357
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
121-484 4.62e-20

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 91.76  E-value: 4.62e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 121 PCRDGWVYETPG---SSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAIS 197
Cdd:cd17443    7 LCTGGWPFSAAAglgSNLVTEWNLVCDDGWKVPLEKISYLLGWLLGYIILGAGCDRLGRRAAFVLSLVLATLLGVSVALS 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 198 PTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPnFFFL 277
Cdd:cd17443   87 ASPPTFLVLRLLQGGTLAGVFLSLYIARLELCDPSHRLMVSMGAGFFSVAGELLLPGLAVLCRDWRVLQGVGTLP-LLLL 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 278 LYYWCIPEsprwlisqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFT 357
Cdd:cd17443  166 LLYWCFPS------------------------------------------------------------RNGLILGFTAFI 185
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 358 SSVLYQGLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAG-AACLASVFIPGDLQWLKIIIS 436
Cdd:cd17443  186 GGGIRYCFARNLAPFVPTFYLPYFLQAGLEALACIFLCLTVDRCGRRGVLLLGTIVTGlSSLLLLALTQYLHGGLVLVLS 265
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 302148518 437 CLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFL 484
Cdd:cd17443  266 VVGLLASHAVSMLSMFFAAEVLPTVIRGAGLGLIMGAGFLGRAAGPLM 313
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
134-295 5.41e-20

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 91.86  E-value: 5.41e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 134 SIVTEFNLvcaNSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLV 213
Cdd:cd17359   26 FLQTDFNL---TPFLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLA 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 214 SKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH-----------WRWLQFTVSLPNFFFLLYYWC 282
Cdd:cd17359  103 VGGASALVPMYIAEVAPAEIRGRLVSLNQLMIVFGQLLAYIVNYLIANaggadwlgaegWRWMLGLEAIPAILFLLGMLF 182
                        170
                 ....*....|...
gi 302148518 283 IPESPRWLISQNK 295
Cdd:cd17359  183 IPESPRWLVSKGK 195
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
144-485 1.15e-19

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 90.95  E-value: 1.15e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 144 ANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYI 223
Cdd:cd06174   28 LSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFAPSFWLLLLGRFLLGLGSGLIDPAVLA 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 224 LITEFVGRRYRRTVGIFYQVAYTVG-----LLVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAE 298
Cdd:cd06174  108 LIADLFPERERGRALGLLQAFGSVGgilgpLLGGILASSLGFGWRAVFLIAAALALLAAILLLLVVPDPPESARAKNEEA 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 299 AMRIIKHIAKKNGKSLPASLQRLRleeetgkklnpSFLdlvrtpqirkhTMILMYNWFTSSVLYqgLIMHMGLAGDNIYL 378
Cdd:cd06174  188 SSKSVLKLLKRVLKNPGLWLLLLA-----------IFL-----------VNLAYYSFSTLLPLF--LLDLGGLSVAVAGL 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 379 DFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISCLGrMGITMAYEIVCLVNAELY 458
Cdd:cd06174  244 LLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLG-FGLGGLLPLSFALIAELF 322
                        330       340
                 ....*....|....*....|....*..
gi 302148518 459 PTFIRNLGVHICSSMCDIGGIITPFLV 485
Cdd:cd06174  323 PPEIRGTAFGLLNTFGFLGGAIGPLLA 349
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
159-485 2.18e-19

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 90.49  E-value: 2.18e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  159 GFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVG 238
Cdd:TIGR00895  64 GMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAV 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  239 IFYQVAYTVGLLV---LAGVAYALPHWRWLqFTVS--LPNFFFLLYYWCIPESPRWLISQNKNAeAMRIIKHIAKKNGKS 313
Cdd:TIGR00895 144 GLMFCGYPIGAAVggfLAGWLIPVFGWRSL-FYVGgiAPLLLLLLLMRFLPESIDFLVSKRPET-VRRIVNAIAPQMQAE 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  314 LPASLQRLRLEEETGKklnpSFLDLVRTPQIRKHTMILMYNWFTSSVLYQGLIMHMGL----AGDNIYLDFFYSALVEFP 389
Cdd:TIGR00895 222 AQSALPEQKSTQGTKR----SVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKlmveLGFSLSLAATGGALFNFG 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  390 AAFMIILT---IDRIGRRyPWAASNMVAGAACLASVFIPGDLQWLKIIISCLGrMGITMAYEIVCLVNAELYPTFIRNLG 466
Cdd:TIGR00895 298 GVIGSIIFgwlADRLGPR-VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAG-FFVNGGQSGLYALMALFYPTAIRATG 375
                         330
                  ....*....|....*....
gi 302148518  467 VHICSSMCDIGGIITPFLV 485
Cdd:TIGR00895 376 VGWAIGIGRLGAIIGPILA 394
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
133-478 1.59e-18

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 86.95  E-value: 1.59e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 133 SSIVTEFNlvcANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGL 212
Cdd:COG2814   34 PLIAADLG---ASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLCALAPSLWLLLAARFLQGL 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 213 VSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLV---LAGVAYALPHWRWLQFTVSLPNFFFLLY-YWCIPESPR 288
Cdd:COG2814  111 GAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALgplLGGLLADLFGWRWVFLVNAVLALLALLLlLRLLPESRP 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 289 wlisqnknaeamriikhiakkngkslpaslqrlrleeETGKKLNPSFLDLVRTPQIRKHT------MILMYNWFTSSVLY 362
Cdd:COG2814  191 -------------------------------------AARARLRGSLRELLRRPRLLLLLllafllGFGFFALFTYLPLY 233
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 363 qgLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGdlQWLKIIISCLGRMG 442
Cdd:COG2814  234 --LQEVLGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGS--LWLLLLALFLLGFG 309
                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 302148518 443 ITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGG 478
Cdd:COG2814  310 FGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGG 345
MFS_GLUT8_Class3 cd17433
Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
144-470 1.65e-18

Glucose transporter type 8, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 8 (GLUT8) is also called Solute carrier family 2, facilitated glucose transporter member 8 (SLC2A8) or glucose transporter type X1 (GLUTX1). It is classified as a Class 3 GLUT protein and is an insulin-regulated facilitative glucose transporter predominantly expressed in testis and brain. It can also transport fructose and galactose. SLC2A8 knockout mice were viable, developed normally, and display only a very mild phenotype, including mild alterations in the brain (increased proliferation of hippocampal neurons), heart (impaired transmission of electrical wave through the atrium), and sperm cells (reduced number of motile sperm cells). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340991 [Multi-domain]  Cd Length: 416  Bit Score: 88.01  E-value: 1.65e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 144 ANSWmldlFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVlINAAAGVLMAISPTYTWMLIF-RLIQGLVSKAGWLIGY 222
Cdd:cd17433   42 AASW----FGSVVTLGAAAGGVLGGWIVDRAGRKLSLMLCS-VPFIAGFTVITAAQNVWMLYVgRLLTGLASGVTSLVVP 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 223 ILITEFVGRRYRRTVGIFYQVAYTVGLLvLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMRI 302
Cdd:cd17433  117 VYISEIAHPRVRGTLGSCVQLMVVIGIM-GAYLAGLVLDWRWLAVLGSIPPTLMLLLMCFMPETPRFLLTQHRRQEAMAA 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 303 IKHIakkNGKSLPASLQRLRLEEETGKKLNPSFLDLVRTPQIRK----HTMILMYNWFT---SSVLYQGLIMHMGLAGDN 375
Cdd:cd17433  196 LRFL---RGPDQGWEWECIGIEQSFHLEEQSFSLALLKQPGIYKpliiGVSLMAFQQLTginAVMFYAETIFEEAKFKDS 272
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 376 IYLDFFYSAL-VEFPAAFMIILtiDRIGRRYPWAASNMVAgaaclasVFIPGDLQWLKIIISCLGRMGITMAY-EIVCLV 453
Cdd:cd17433  273 SVASVIVAAIqVLFTAVAALIM--DRAGRKVLLVLSGVVM-------VFSTAAFGWLAVGSMGFFIAGFAVGWgPIPWLV 343
                        330
                 ....*....|....*..
gi 302148518 454 NAELYPTFIRNLGVHIC 470
Cdd:cd17433  344 MSEIFPLHVRGVASGIC 360
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
134-291 2.68e-17

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 82.55  E-value: 2.68e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 134 SIVTEFNlvcANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLV 213
Cdd:COG0477   39 SIAADLG---ASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLCGLAPSPELLIAARALQGIG 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 214 SKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH---WRWLqFTVSLPNFFFLLYY-WCIPESPRW 289
Cdd:COG0477  116 AGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAalgWRWI-FLINAPLGLLALVLrLRLPESRGL 194

                 ..
gi 302148518 290 LI 291
Cdd:COG0477  195 LL 196
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
122-281 3.87e-17

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 82.90  E-value: 3.87e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 122 CRDGWVY-ETPG--SSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISP 198
Cdd:cd17445    8 CDAGWNYtGLPGltNNIVTEWDLVCSRYWLVPLEQVCFILGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGVLVAVAA 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 199 TYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLL 278
Cdd:cd17445   88 SPSLFMAMRFLLGAALAGVYLTLYLTRLELCDPPQRLLVAMAGGLTMVGGHFLLLGLALGCGSWRVLQGTITAPLSLFLC 167

                 ...
gi 302148518 279 YYW 281
Cdd:cd17445  168 YGC 170
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
147-484 7.42e-17

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 82.55  E-value: 7.42e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 147 WMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGlVSKAGWLIGYILIT 226
Cdd:cd17442   36 WQVALVTTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFSLLTSFAPSYIWFVFLRCMVG-CGVSGHSQGLIIKT 114
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 227 EFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALP---HWRWLQFTVSLPNFFFLLYYWCIPESPR-----WLISQNKNAE 298
Cdd:cd17442  115 EFLPTKYRGYMLPLSQIFWLAGSLLIIGLASVVIptlGWRWLIRFASIPGIILIVVFKFIPRTTLqiwviWLGISFAYYG 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 299 AMRIIKHIAKKN----GKSLPASLQRLRLEEETGKKLNPsfldlvrtpqirkhtmilmynwFTSSVlYQGLIMhmglagd 374
Cdd:cd17442  195 VILASSELLERNllcgSDPSDEEAGIKHIESESPCYCHM----------------------FNPSD-YQTMII------- 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 375 niyldffySALVEFPAAFMIILTIDRIGRRYpwaasNMVAGAACLASVF----IPGDLQWLKIIISCLgRMGITMAYEIV 450
Cdd:cd17442  245 --------STLGEIALNPLNILGINFLGRRL-----SLVITMGLTAIFFlllnICTSSAGLTIFLFML-RALVSANFNTV 310
                        330       340       350
                 ....*....|....*....|....*....|....
gi 302148518 451 CLVNAELYPTFIRNLGVHICSSMCDIGGIITPFL 484
Cdd:cd17442  311 YIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFI 344
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
130-473 1.23e-16

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 81.47  E-value: 1.23e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 130 TPGSSIVTEFNLVcANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLI 209
Cdd:cd17315   18 GALLYIAKDLGFG-LSTSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPNVWVLIVGRFL 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 210 QGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLA----GVAYALPHWRWLQFTVSLPN--FFFLLYYWCi 283
Cdd:cd17315   97 LGLGVGLASVLVPLYISEIAPAKIRGALGTLNQLMITFGILLAYllglALSLSPPGWWRLMFALAAVPalLQLLLMFFL- 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 284 PESPRWLIsqnknAEAMRIIKHIAKKNGkslpaslqrlrleeetgkklnpsfldlvrtpqirkhtmiLMYnwftssvlYQ 363
Cdd:cd17315  176 PESRALLV-----GVGLQLLQQLTGINA---------------------------------------VMY--------YA 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 364 GLIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRR--YPWAASNMVAGAACLASVFIPGDL----QWLKIIISC 437
Cdd:cd17315  204 PTIFKSAGGGTASILASIIVGVVNLLATLVAIRLVDKVGRRplLLIGFAGMAASLLLLAIAFLLPALakaaGWLALLGIL 283
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 302148518 438 LGRMGITMAYEIVC-LVNAELYPTFIRNLGVHICSSM 473
Cdd:cd17315  284 LYIAAFAMGAGPVPwLLLSEIFPLRIRGKGMAIATLV 320
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
144-518 6.46e-16

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 80.23  E-value: 6.46e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 144 ANSWMLDLFqssVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYI 223
Cdd:cd17363   34 SNKGMLGLI---VYLGMMVGAFVWGGLADKLGRKQCLLIALSVNGVFAFLSSFVQGYGFFLFCRLLSGIGIGGSIPIVFS 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 224 LITEFVGRRYRRT----VGIFYQV--------AYTV----GLLVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESP 287
Cdd:cd17363  111 YFAEFLAREKRGEhlswLCMFWMIgglyasamAWAIiphyGWGFSMGTAYQFHSWRVFVIVCALPSVASVVALTFMPESP 190
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 288 RWLISQNKNAEAMRIIK--------------------HIAKKNGKSL------------------PASLQRLRLEE---- 325
Cdd:cd17363  191 RFLLEVGKHDEAWMILKqvhdtnmrakghpervftvsHIKRMNTLFLaivwftmsfsyygltvwfPDMIKYLQFEDslfe 270
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 326 ----ETGKKLNPSFLDLVRTPQIRKHTMILMYNWFTSS------VLYQGLIMHMGLAGDN---IYLDFFYSALVEFPAAF 392
Cdd:cd17363  271 ecyfEDVTSTNTFFENCTFINTVFYNTDLFEYKFIDSRflnstfFLKEKCGCHLNDDEENaylIYLVSFLGSLSVLPGNI 350
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 393 MIILTIDRIGRRYPWAASNMVAGAACLASVFipGDLQWLKIIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSS 472
Cdd:cd17363  351 VSALLMDKIGRLKMIGGSMLLSAVCCFFLFF--GNSESAMIGLQCLFCGVSIAAWNALDVVTVELYPTDKRATAFGFLNG 428
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 302148518 473 MCDIGGIITPFLVYRLTNIWLELPLMVFGVLGLVAGGLVLLLPETK 518
Cdd:cd17363  429 LCKLAAILGNSIFGSFVGITKVIPILLASAALVCGGLLALKLPETR 474
MFS_SLC22A17_like cd17373
Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; ...
132-482 9.30e-16

Solute carrier family 22, member 17 and similar proteins of the Major Facilitator Superfamily; This group is composed of Solute carrier family 22, members 17, 23, and 31. They are members of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). SLC22A17 functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. SLC22A23 and SLC22A31 are orphan members of the SLC22 family. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22A17-like group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340931 [Multi-domain]  Cd Length: 348  Bit Score: 78.71  E-value: 9.30e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 132 GSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQG 211
Cdd:cd17373   10 VQNAVSKWDLVCDNGWKVHLEQFSLLLGLIFGYLILGCIADRFGRRPVLLFSLILILIFGLTVALAVSVTMFSTLRFLEG 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 212 LVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPesprwli 291
Cdd:cd17373   90 FCLAGIILTLYLLRLELCDPGKRLMITMVASLVAVAGQFLMPGLAALCRDWRVLQALIICPFLLMLLYWSIFP------- 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 292 sqnknaeamriikhiakkngkslpaslqrlrleeetgkklnpsfldlvrtpqirKHTMILMYNWFTSsvlyqGLIMH--- 368
Cdd:cd17373  163 ------------------------------------------------------KNILILGFNSLTG-----YGIRHcfa 183
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 369 ---MGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASV----FIPGDLQ------------ 429
Cdd:cd17373  184 rsmMGHEPENFYLDYYLTAGIAAVACVFLCVTVDFLGRRGGLLLFMILTGLASLLLLgllnLIGKYSQhpdsgmsdsvkd 263
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 302148518 430 WLKIIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDIGGIITP 482
Cdd:cd17373  264 KFSIAFSVLGLFASHAVGSLSVLFAAEVTPTVIRGGGLGLVLASGGLGMLTGP 316
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
151-485 1.35e-15

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 78.37  E-value: 1.35e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 151 LFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVG 230
Cdd:COG2271   49 LLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFP 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 231 RRYRRTVGIFYQVAYTVGLLVLAGVAYALPH---WRWLQFTVSLPNFFF-LLYYWCIpesprWLIsqnknaeamriikhi 306
Cdd:COG2271  129 PKERGRALGIFNAGGPLGGALAPPLLGWLLAafgWRAAFLILGLPGLLLaLLRFWLL-----ALA--------------- 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 307 akkngkslpaslqrlrleeetgkklnpsfldlvrtpqirkHTMILMYNWFTSSVLYQGLIMHMGLAGDNIyldFFYSALV 386
Cdd:COG2271  189 ----------------------------------------YFLVYFALYGFLTWLPTYLVEVRGLSLAQA---GLLLSLP 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 387 EFPAAFMIILT---IDRIGRRYPW--AASNMVAGAACLASVFIPGdlQWLKIIISCLGRMGITMAYEIVCLVNAELYPTF 461
Cdd:COG2271  226 FLAGIVGSLLGgwlSDRLGRRRKLvlAIGLLLAALALLLLALLPS--PALAIALLFLAGFGLGGAFGLLWALAAELFPKK 303
                        330       340
                 ....*....|....*....|....
gi 302148518 462 IRNLGVHICSSMCDIGGIITPFLV 485
Cdd:COG2271  304 ARGTASGLVNTFGFLGGALGPLLV 327
MFS_1 pfam07690
Major Facilitator Superfamily;
146-482 2.29e-15

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 77.46  E-value: 2.29e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  146 SWMLDLFQssvnVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILI 225
Cdd:pfam07690  35 GLLLTLFS----LGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVLRVLQGLGAGALFPAALALI 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  226 TEFVGRRYRRTVGIFYQVAYTVGLLV---LAGVAYALPHWRWLqFTVSLPNFFFLLYYWCIPESPrwlisqnknaeamri 302
Cdd:pfam07690 111 ADWFPPEERGRALGLVSAGFGLGAALgplLGGLLASLFGWRAA-FLILAILSLLAAVLLLLPRPP--------------- 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  303 ikhiaKKNGKSLPASLQRLRLEEETGKKLNPSFLDLVRTpqirkhTMILMYNWFTSSVLYQGLIMHMGLAGDNIYLDFFY 382
Cdd:pfam07690 175 -----PESKRPKPAEEARLSLIVAWKALLRDPVLWLLLA------LLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGL 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  383 SALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISCLGrMGITMAYEIVCLVN--AELYPT 460
Cdd:pfam07690 244 GGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLLALLL-LGFGFGLVFPALNAlvSDLAPK 322
                         330       340
                  ....*....|....*....|..
gi 302148518  461 FIRNLGVHICSSMCDIGGIITP 482
Cdd:pfam07690 323 EERGTASGLYNTAGSLGGALGP 344
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
141-518 1.03e-14

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 76.50  E-value: 1.03e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 141 LVCANSWMLDLFqssVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLI 220
Cdd:cd17438   31 LSSSNKGMLGLI---VYLGMMAGAFIWGGLADKLGRKRCLIISLAINASFAFLSSFVQGYGAFLFCRLISGFGIGGSLPI 107
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 221 GYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYA-LPH---------------WRWLQFTVSLPNFFFLLYYWCIP 284
Cdd:cd17438  108 VFAYFSEFLAREKRGEHLSWLCMFWMIGGLYASAMAWSiIPHygwgfsmgtnyhfhsWRVFVIICALPCIASIIALKFMP 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 285 ESPRWLISQNKNAEAMRIIKHIAKKNgkslpaslqrLRLEEETGKKLNPSFLDlvrtpqiRKHTMILMYNWFTSSVLYQG 364
Cdd:cd17438  188 ESPRFLLEMGKHDEAWMILKNIHDTN----------MRAKGTPEKVFTVSNIK-------RKNTLFLAVVWFTMAFSYYG 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 365 LIM------------------------------------------------------------------------HMGLA 372
Cdd:cd17438  251 LTVwfpdmirylqkhvtfedslfdecyfedvtstdtyfknctiestifyntdlyehkfidcrfinstfleqkegcHMDFE 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 373 GDN---IYLDFFYSALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFipGDLQWLKIIISCLGRMGITMAYEI 449
Cdd:cd17438  331 EDNdflIYLVSFLGSLSVLPGNIISALLMDKIGRIKMIGGSMLISAVCCFFLFF--GNSESAMIGWQCLFCGTSIAAWNA 408
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 302148518 450 VCLVNAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRLTNIWLELPLMVFGVLGLVAGGLVLLLPETK 518
Cdd:cd17438  409 LDVITVELYPTNKRATAFGILNGLCKFAAILGNSIFASFVGITKVIPILLASTALVGGGLISLRLPETR 477
xylE PRK10077
D-xylose transporter XylE; Provisional
144-469 3.12e-14

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 75.11  E-value: 3.12e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 144 ANSWmLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTtvlinaaAGVLMAIS----------------PTYTWML--- 204
Cdd:PRK10077  53 ANSL-LGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI-------AAVLFFISalgsawpefgftsigpDNTGYVPefv 124
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 205 IFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH-----------WRWLQFTVSLPN 273
Cdd:PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARsgdaswlntdgWRYMFASEAIPA 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 274 FFFLLYYWCIPESPRWLISQNKNAEAMRIIKHIakkNGKSLPASL-----QRLRLEEETGKKLnPSFLDLVrtpqIRKHT 348
Cdd:PRK10077 205 LLFLMLLYFVPETPRYLMSRGKQEQAEGILRKI---MGNTLATQAlqeikHSLDHGRKTGGKL-LMFGVGV----IVIGV 276
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 349 MILMYNWFT--SSVLYQG--LIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRRyPW---AASNMVAGAACLAS 421
Cdd:PRK10077 277 MLSVFQQFVgiNVVLYYApeIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-PLqiiGALGMAIGMFSLGT 355
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 302148518 422 VF---IPGDLQWLKIIISCLGRMgitMAYEIVCLV-NAELYPTFIRNLGVHI 469
Cdd:PRK10077 356 AFytqAPGIVALLSMLFYVAAFA---MSWGPVCWVlLSEIFPNAIRGKALAI 404
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
134-289 3.61e-13

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 71.15  E-value: 3.61e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 134 SIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLV 213
Cdd:cd17360   22 YIKDDLGEVVLSTGWQELIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLG 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 214 SKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH----WRWLQFTVSLPNFFFLLYYWCIPESPRW 289
Cdd:cd17360  102 VGIASMTVPLYIAEAAPPRIRGRLVTINVLFITGGQFVAYVINGAFSYlpggWRWMLGLAAVPAVLQFIGLLFLPESPRW 181
MFS_SLC22A23 cd17444
Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier ...
134-283 6.08e-13

Solute carrier family 22, member 23 of the Major Facilitator Superfamily; Solute carrier family 22, member 23 (SLC22A23) is an orphan member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It is abundantly expressed in brain and is also found in liver. Single-nucleotide polymorphisms in SLC22A23 are associated with inflammatory bowel disease (IBD) in a Canadian white population. SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A23 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341002 [Multi-domain]  Cd Length: 364  Bit Score: 70.26  E-value: 6.08e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 134 SIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLV 213
Cdd:cd17444   23 NIVSKWDLVCDSSWKVHIAKFSLLVGLIFGYLITGCLADWFGRRPVLLFSVVFILIFGLTVALSVNVTMFSTLRFFEGFC 102
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 214 SKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPnFFFLLYYWCI 283
Cdd:cd17444  103 LAGIILSLYALRIELCPPGHRFMITMVASFIAMAGQFLMPGLAALCRDWQVLQAVIICP-FLLMLSYWCI 171
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
154-524 7.92e-13

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 70.36  E-value: 7.92e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLI-NAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRR 232
Cdd:cd17356   52 SIVNLGSFFGALISSFLSDRIGRKKSIQIGCVIyIIGAIIQVAAIGKWYQLIVGRIIAGLGVGFASVLVPVYQSEVAPKH 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 233 YRRTVGIFYQVAYTVGLLVLAGVAYALPH------WRWLQFTVSLPNFFFLLYYWCIPESPRWLisqnknaeaMRIIkhi 306
Cdd:cd17356  132 IRGTLVSLYQLAITIGILVAYCINYGTHKldgsaqWRIPLGLQIVWGLLLLIGMFFLPESPRWL---------YRTI--- 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 307 akkngksLPASLQRLRleeetgkklnpsfldlvrtpQIRKHTMILMYnwftSSVLYQGlimhMGLAGDNIYLDFFYSALV 386
Cdd:cd17356  200 -------LGIMLQLFQ--------------------QLTGINYFFYY----GTTIFQS----TGLTGSSPLLTSIILYIV 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 387 EFPAAFMIILTIDRIGRRYP------WAASNMVAGAACLASVFIPGDLQWLK--------IIISCLGRMGITMAYEIVC- 451
Cdd:cd17356  245 NFVSTIPGLFFVDKFGRRTClligaaGMSICLFIYAAVGVRYLIPNPQSGTSnksagngmIVFICLFIFSFATTWGPIAw 324
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 302148518 452 LVNAELYPTFIRNLGVHICSSMCDIGG----IITPFLVYRLtNIWLELPLMVFgvLGLVAGGLVLLLPETKGKALPE 524
Cdd:cd17356  325 VYVAEVFPLRVRSKGMALATAFNWLWNflisFFTPFIIGSI-GFKYYYIFAGC--NLLAFIVVFFFVPETKGLTLEE 398
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
144-365 1.06e-12

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 70.78  E-value: 1.06e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  144 ANSWMLDLFqssVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYI 223
Cdd:TIGR01299 202 SGKGMLGLI---VYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFS 278
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  224 LITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYAL-PH---------------WRWLQFTVSLPNFFFLLYYWCIPESP 287
Cdd:TIGR01299 279 YFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIiPHygwsfqmgsayqfhsWRVFVIVCAFPCVFAIGALTFMPESP 358
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  288 RWLISQNKNAEAMRIIKHIAKKN--GKSLPASL-------------QRLRLEEETG-----------KKLNPSFLDLVR- 340
Cdd:TIGR01299 359 RFFLENGKHDEAWMILKLIHDTNmrAKGHPEKVfsvnhiktihqedELIEIESDTGtwyqrcfvralSEGGGIWGNFLRc 438
                         250       260
                  ....*....|....*....|....*.
gi 302148518  341 -TPQIRKHTMILMYNWFTSSVLYQGL 365
Cdd:TIGR01299 439 fNPEVREITIKLMGVWFTLSFGYYGL 464
MFS_GLUT_Class1 cd17431
Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
154-404 1.27e-12

Class 1 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-4 are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT1, also called solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1), displays broad substrate specificity and can transport a wide range of pentoses and hexoses including glucose, galactose, mannose, and glucosamine. It is found in the brain, erythrocytes, and in many fetal tissues. GLUT2 (or SLC2A2) is found in the liver, islet of Langerhans, intestine, and kidney, and is the isoform that likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by beta cells. GLUT3 (or SLC2A3) is found in the brain and can mediates the uptake of glucose, 2-deoxyglucose, galactose, mannose, xylose and fucose, and dehydroascorbate. GLUT4 (or SLC2A4) is an insulin-regulated facilitative glucose transporter found in adipose tissues, and in skeletal and cardiac muscle. GLUT14 (or SLC2A14) is an orphan transporter expressed mainly in the testis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340989 [Multi-domain]  Cd Length: 445  Bit Score: 70.06  E-value: 1.27e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAIS---PTYTwMLIF-RLIQGLVSkaGWLIGYI--LITE 227
Cdd:cd17431   57 AIFSVGGMIGSFSVGLFVNRFGRRNSMLYNNLLAFAGAALMGLSklaKSYE-MLILgRFIIGLYC--GLTTGLVpmYIGE 133
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 228 FVGRRYRRTVGIFYQVAYTVGLLVlaGVAYALPH-------WRWLQFTVSLPNFFFLLYYWCIPESPRWL-ISQNKNAEA 299
Cdd:cd17431  134 ISPTALRGALGTLHQLGIVVGILI--SQIFGLEFilgteelWPLLLGFTIVPAILQLALLPFCPESPRYLlINRNEEEEA 211
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 300 MRIIKHIakKNGKSLPASLQRLRLE-EETGKKLNPSFLDLVRTPQIRKHTMIlmynwftssvlyqGLIMHMGLAGDNIYL 378
Cdd:cd17431  212 KSVLKKL--RGTTDVSEDIQEMKEEsRQMMREKKVTILELFRSSSYRQPIII-------------AIVLQLSQQLSGINA 276
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 302148518 379 DFFYS------ALVEFPA-------AFMIILT------IDRIGRR 404
Cdd:cd17431  277 VFYYStsifekAGVQQPVyatigagVVNTIFTvvslflVERAGRR 321
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
144-288 7.84e-12

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 66.83  E-value: 7.84e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 144 ANSWMLDLFQSSVNVGFFIGSMSI-----GYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGW 218
Cdd:cd17474   26 AEALGASPAQVGLLITAFTLPAAVlmpvaGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAAGLG 105
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 302148518 219 LIGYILITEFVGRRYRRTVGIFYQVAYTVGLLV--LAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPR 288
Cdd:cd17474  106 PLALTLIGDLFEGGERAKAMGLYEAALGLGIAVgpLLGGLLAAISWRYPFFLLAALIPVAFLAILFLLPEPK 177
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
154-288 1.30e-11

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 66.45  E-value: 1.30e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:cd17325   38 AAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAFATSYWQLLLARFLQGLASAAVWPAAMALIADIAPPEE 117
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 302148518 234 RRTVGIFYQVAYTVGLL---VLAGVAYALPHWRWLQFTVSLPNFF-FLLYYWCIPESPR 288
Cdd:cd17325  118 RGRAMGIFSSAIGLGFLigpLLGGLLADALGYRAPFLVCAALALLaLVLALLLLPEPRP 176
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
158-404 2.18e-11

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 66.10  E-value: 2.18e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAIS-PTYTW-MLIF-RLIQGLVSKAGWLIGYILITEFVGRRYR 234
Cdd:cd17432   61 LGGLFGSLLVGPLVIRLGRKGTLLLNNIFAIVAAILMGLSkIAKSFeMIIVgRFLVGINAGISLNVVPMYLGESAPKNLR 140
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 235 RTVGIFYQVAYTVGLLV--LAGVAYAL---PHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMRiiKHIAKK 309
Cdd:cd17432  141 GAVGLVPAIFITLGILLgqVLGLRELLgneEGWPLLLALTGVPALLQLLTLPFFPESPRYLLIEKGDEEAAR--KALQRL 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 310 NGKS-LPASLQRLRLEEETGKKLNP-SFLDLVRTPQIRkhtmilmynWFTSSVLYqgLIMHMGLAGDN-IYL---DFFYS 383
Cdd:cd17432  219 RGKEdVDDEMEEMLEEQRAEKGVGTvSVLELFRDRSVR---------WQLISIIV--LMAGQQLCGINaIYFyadSIFLE 287
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 302148518 384 A---------------LVEFPAAFMIILTIDRIGRR 404
Cdd:cd17432  288 AgipedkiqyvtvgtgACEVLATITCVLVIERLGRR 323
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
144-365 4.33e-11

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 65.05  E-value: 4.33e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 144 ANSWMLDLFqssVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYI 223
Cdd:cd17439   34 SNKGMLGLI---VYLGMMVGAFLWGGLADRIGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFS 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 224 LITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYA-LPH---------------WRWLQFTVSLPNFFFLLYYWCIPESP 287
Cdd:cd17439  111 YFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAiIPHygwsfqmgsayqfhsWRVFVLVCAFPSVFAIGALTTMPESP 190
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 302148518 288 RWLISQNKNAEAMRIIKHIAKKNGKSlpaslqrlrleeetgkKLNPSFLDLVRTPQiRKHTMILMYNWFTSSVLYQGL 365
Cdd:cd17439  191 RFFLENGKHDEAWMVLKQVHDTNMRA----------------KGHPERVFSVTHIK-RRITLMMMAVWFTMSFSYYGL 251
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
130-289 3.26e-10

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 61.98  E-value: 3.26e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 130 TPGSSIVTEFNLVCANSwmlDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLI 209
Cdd:cd17362   25 SPALSGTDWYNLSSLQS---GLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLI 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 210 QGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH----WRWLQFTVSLPNFFFLLYYWCIPE 285
Cdd:cd17362  102 YGVGIGLAMHAAPVYIAETSPSHIRGLLVSLKELFIVLGILLGYVSGYAFADvvggWRYMYGLAAPPALLLGIGMWFLPP 181

                 ....
gi 302148518 286 SPRW 289
Cdd:cd17362  182 SPRW 185
PRK03893 PRK03893
putative sialic acid transporter; Provisional
163-297 5.11e-10

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 62.02  E-value: 5.11e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 163 GSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLV------SKAGWLIgyilitEFVGRRYRRT 236
Cdd:PRK03893  71 GGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGmageygSSATYVI------ESWPKHLRNK 144
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 302148518 237 VGIFYQVAYTVGLLVLAGV-AYALPH--WRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNA 297
Cdd:PRK03893 145 ASGFLISGFSIGAVVAAQVySLVVPVwgWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKA 208
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
146-272 1.65e-09

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 59.88  E-value: 1.65e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 146 SWMLDLFqssvNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLvskAGWLI----G 221
Cdd:cd17321   34 QWVVNAY----LLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGI---GAAAImpasL 106
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 302148518 222 YILITEFVGRRYRRTVGIF---YQVAYTVGLLvLAGVAYALPHWRWLqFTVSLP 272
Cdd:cd17321  107 ALIAATFPGERRGRALGLWgavVGIGAALGPL-LGGLLLELFGWRWI-FLINVP 158
2A0106 TIGR00883
metabolite-proton symporter; This model represents the metabolite:H+ symport subfamily of the ...
158-484 2.77e-09

metabolite-proton symporter; This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc. [Transport and binding proteins, Unknown substrate]


Pssm-ID: 273320 [Multi-domain]  Cd Length: 394  Bit Score: 59.21  E-value: 2.77e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  158 VGFF---IGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTY----TW----MLIFRLIQGLVSKAGWLIGYILIT 226
Cdd:TIGR00883  43 AGFLarpLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYatigIWapilLLLARLIQGFSLGGEWGGAALYLA 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  227 EFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH---------WRW-LQFTVSLPNFFFLLYY-WCIPESPRWLISQNK 295
Cdd:TIGR00883 123 EYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYllgddalleWGWrIPFLVSAVLVLIGLYLrRNLEETPVFEKAQEK 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  296 NAEAMRIIKHIAKKNGKSLpaslqrlrleeetgkklnpsFLDLVrtpqIRKHTMILMYNWFTSSVLYqgLIMHMGLAGDN 375
Cdd:TIGR00883 203 HKKKRGPIAETLTKHRKPF--------------------LLGLG----LVIATTTTFYLITTYLPTY--LTQTLGLSANS 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  376 IYLDFFYSALVefpaaFMIILTI-----DRIGRR--YPWAASNMVAGAACLASVFIPGDLQWLKIIISCLGRMGITMAYE 448
Cdd:TIGR00883 257 ALLVLMLSLIL-----FFITIPLsgalsDRIGRRpvLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGMALIGGMYTG 331
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 302148518  449 IVCLVNAELYPTFIRNLGVHICSSMCD-IGGIITPFL 484
Cdd:TIGR00883 332 PMGSFLPELFPTEVRYTGASLAYNLAGaIFGGFAPYI 368
MFS_GLUT6_Class3 cd17434
Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of ...
146-301 4.21e-09

Glucose transporter type 6, a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 6 (GLUT6) is also called Solute carrier family 2, facilitated glucose transporter member 6 (SLC2A6). It is classified as a Class 3 GLUT protein, and is a facilitative glucose transporter that binds cytochalasin B with low affinity. It is found in the brain, spleen, and leucocytes. GLUT6 may function in oxalate secretion. SLC2A6 has been identified as an oxalate nephrolithiasis gene in mice; its deletion causes spontaneous calcium oxalate nephrolithiasis in the setting of hyperoxalaemia, hyperoxaluria, and nephrocalcinosis. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340992 [Multi-domain]  Cd Length: 417  Bit Score: 58.69  E-value: 4.21e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 146 SWmldlFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAiSPTYTWMLIF-RLIQGLVSKAGWLIGYIL 224
Cdd:cd17434   44 SW----FGSVFTLGAAAGGLSAMFLNDRLGRKLSIMFSAVPSALGYLLMG-SAQGIWMLLLgRFLTGFAGGITAASIPVY 118
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 302148518 225 ITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPhWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMR 301
Cdd:cd17434  119 VSEISHPGVRGALGACPQIMAVFGSLALYALGLLLP-WRWLAVAGEVPVVIMILLLCFMPNSPRFLISKGKDEKALK 194
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
158-439 4.35e-09

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 58.74  E-value: 4.35e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFFIGSMS---IGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYR 234
Cdd:COG2223   48 IPVLVGALLripLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSKWFPPDRR 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 235 RTVGIFYQVAYTVGLLVLAGVAYALPH---WRWLQFTVSLPNFFFLLYYWcipesprwlisqnknaeamRIIKHIAKKNG 311
Cdd:COG2223  128 GLALGLAAGGGNLGAAVAAFLAPLLIAafgWRNAFLILGILLLVVAVLAW-------------------LFLRDPPAGAA 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 312 KSLPASLqrlrleeetgkklnPSFLDLVRTPQIrkHTMILMYnwFTSSVLYQGLIMHMGLAGDNIY-LD----FFYSALV 386
Cdd:COG2223  189 AAAKASL--------------RDQLEALRDPRF--WLLSLLY--FGTFGSFIGFSSWLPPYLVDQFgLSaataGLLAALF 250
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 302148518 387 EFPAAFMIILT---IDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISCLG 439
Cdd:COG2223  251 ALLGALGRPLGgwlSDRIGGRRVLLIVFALMALGLLLLALALGSLWLFLVLFLLLG 306
2_A_01_02 TIGR00880
Multidrug resistance protein;
158-286 1.06e-08

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 54.19  E-value: 1.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYR-RT 236
Cdd:TIGR00880   9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERgVA 88
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 302148518  237 VGIFYQVAyTVGLLV---LAGVAYALPHWRWLQFTVSLPN--FFFLLYYWcIPES 286
Cdd:TIGR00880  89 LGLMSAGI-ALGPLLgppLGGVLAQFLGWRAPFLFLAILAlaAFILLAFL-LPET 141
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
158-483 1.71e-08

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 56.77  E-value: 1.71e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFF---IGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTY----TW---MLIF-RLIQGLVSKAGWLIGYILIT 226
Cdd:cd17369   52 VGFLarpLGGVVFGHFGDRIGRKKTLVLTLLLMGIATFLIGLLPTYaqigILapiLLVLlRLLQGLALGGEWGGAVLMAV 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 227 EFVGRRYRRTVGIFYQVAYTVGLLVLAGVayalphwrWLQFTVSLPNFFFLLYYWCIPesprWLISQnknaeAMRIIkhi 306
Cdd:cd17369  132 EHAPPKRRGFYGSFPQLGAPVGLLLATGV--------FLLLSALLSDEAFLSWGWRIP----FLLSA-----VLVAV--- 191
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 307 akkngkslpASLQRLRLEE--------ETGKKLNPSFLDLvrtpqIRKH------TMILMYNWFTSSVLYQGLIM----- 367
Cdd:cd17369  192 ---------GLYIRLRLEEtpvfrrakEAGQVVRAPLVEV-----LRRHwralllAIGLRLAENVLFYLFTTFALsyatq 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 368 HMGLAGDNIYLDFFYSALVefpAAFMIILT---IDRIGRRyPWAASNMVAGAACLASVFI---PGDLQWLKIIISCLGRM 441
Cdd:cd17369  258 TLGVDRSTVLLAVLIASVV---AAITIPLFgwlSDRVGRR-PVYLAGALLAALFAFPFFWlldTGSTWLIVLAAVVVLGV 333
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*.
gi 302148518 442 GITMAYEIVCLVNAELYPTFIR----NLGVHICSSmcdIGGIITPF 483
Cdd:cd17369  334 LHGMMYGPQAAFLAELFPTRVRytgaSLGYQLGAI---LGGGFAPL 376
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
158-435 2.04e-08

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 56.42  E-value: 2.04e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGlvskAGWLIGYILITEFVGRRYRRTV 237
Cdd:COG2807   64 LAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTALIG----AGIAVGNVLLPGLIKRWFPDRV 139
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 238 GI---FYQVAYTVGLLVLAGVAYALPH---WRWLQFTVSLPNFFFLLyywcipesPRWLISQNKNAEAmriikhiakkng 311
Cdd:COG2807  140 GLmtgLYTAAMGLGAALAAGLTVPLAAalgWRGALAVWALLALLALL--------LWLPLLRRRPAAA------------ 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 312 kslpaslqrlrleeeTGKKLNPSFLDLVRTPQirkhTMILMYNWFTSSVLYQGLIMHM-------GLAGDNIYLDFFYSA 384
Cdd:COG2807  200 ---------------AAAPAAASLRSLWRSPL----AWLLTLFFGLQSLLYYAVVAWLppilrdaGLSAATAGLLLSLFQ 260
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 302148518 385 LVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLAS-VFIPGDLQWLKIII 435
Cdd:COG2807  261 LAGIPGSLLVPLLADRLGDRRPLLLLLGLLGLAGLLGlLLAPGSLPWLWAVL 312
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
158-225 2.71e-08

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 56.04  E-value: 2.71e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 302148518 158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILI 225
Cdd:cd17320   45 LGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAAAGSVVARAIV 112
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
154-499 3.39e-08

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 56.07  E-value: 3.39e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:cd17440   41 SIVYLGMMVGAFFWGGLADKVGRRQSLLICMSVNGFFAFLSSFVQGYGLFLFCRLLSGFGIGGAVPTVFSYFAEVLAREK 120
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 234 RR----------TVGIFYQVAYT------VGLLVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNA 297
Cdd:cd17440  121 RGehlswlcmfwMIGGIYASAMAwaiiphYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHD 200
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 298 EAMRIIKHIAKKN--GKSLPASLQRL-RLEEETGKKLNPSFLDL--------VRTPQIRKH------------------- 347
Cdd:cd17440  201 EAWMILKQIHDTNmrARGQPEKVFTVnRIKKDNTIKLTIVWLTLsfgyyglsVWFPDVIKHlqfksvtfedslfkscffe 280
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 348 ------------TMI--LMYNW------FTSSVLYQGLIMHMGlAGDNIYLDFFYSA-----------LVEFPAAFMIIL 396
Cdd:cd17440  281 dvtsvntyfrncTFIetVFYNTdledykFIDSDFINCTFFHNK-TGCQITFDDDYSAywiyfvnflgtLAVLPGNIVSAL 359
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 397 TIDRIGRRYPWAASNMVAGAACLASVFipGDLQWLKIIISCLGRMGITMAYEIVCLVNAELYPTFIRNLGVHICSSMCDI 476
Cdd:cd17440  360 LMDRIGRLTMLGGSMVLSGISCFFLWF--GTSESMMIGMLCLYNGLTISAWNSLDVVTVELYPTDRRATGFGFLNALCKA 437
                        410       420
                 ....*....|....*....|...
gi 302148518 477 GGIITPFLVYRLTNIWLELPLMV 499
Cdd:cd17440  438 AAVLGNLIFGSLVGITKAIPILL 460
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
140-281 4.08e-08

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 55.27  E-value: 4.08e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 140 NLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWL 219
Cdd:cd17325  228 ELGGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFP 307
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 220 IGYILITEFVGRRYRRTVGIFYQVAYTVGLLV---LAGVAYALPHWRWLQFTVSLPNFFFLLYYW 281
Cdd:cd17325  308 ATLALLADIVPPEGRGTAMGLFNTAFSLGMVLgplLGGFLYDAFGFATPFLAAAALLLLAAVLFL 372
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
158-261 6.00e-08

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 54.99  E-value: 6.00e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFF---IGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTY----TW----MLIFRLIQGLVSKAGWLIGYILIT 226
Cdd:cd17367   48 VGFLmrpIGGWLFGRLADRIGRRAALTLSVSLMAAGSLVIAVTPTYatigIWapiiLLLARLLQGLSVGGEYGTSATYLS 127
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 302148518 227 EFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH 261
Cdd:cd17367  128 EVAPPGRRGFYSSFQYVTLIGGQLLALGVLLVLQH 162
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
151-524 6.18e-08

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 55.12  E-value: 6.18e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  151 LFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYT------WMLIFRLIQGLVSKAGWLIGYIL 224
Cdd:TIGR00887  60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSpksvmaTLCFWRFWLGVGIGGDYPLSAII 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  225 ITEFVGRRYRRTV--------GIFYQVAYTVGLLVLAGVAYALPH------------------WRWLQFTVSLPNFFFLL 278
Cdd:TIGR00887 140 TSEFATKKWRGAMmaavfamqGFGILAGAIVALIVLAGFKHSLEAaadeasctgscvpavdymWRILIGFGAVPALLALY 219
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  279 YYWCIPESPRWLISQNKNAE-AMRIIKHIAKKNGKSLPASLQRLRLEEETGKKlnpSFLDLVRTPQIRKHTMILM---YN 354
Cdd:TIGR00887 220 FRLTIPETPRYTADVAKDVEqAASDMSAVLQVKIEAEPDEVEKASTAVEVPKA---SWSDFFTHFFKWRHGKHLLgtaGS 296
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  355 WFTSSVLYQGLIMHMGL-----------AGDNIYLDFFYSALVEF--------PAAFMIILTIDRIGRRypwaaSNMVAG 415
Cdd:TIGR00887 297 WFLLDIAFYGVNLNQKVilsaigysppaATNNAYEELYKTAVGNLiialagtvPGYWVTVFLVDIIGRK-----PIQLMG 371
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  416 AACLASVFIPGDLQWLKIiisclGRMGITMAYEIVCL------------VNAELYPTFIRNLGVHICSSMCDIGGIITPF 483
Cdd:TIGR00887 372 FFILTVLFFVLGFAYNHL-----STHGFLAIYVLAQFfanfgpnattfiVPGEVFPTRYRSTAHGISAASGKAGAIIGQF 446
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|..
gi 302148518  484 LVYRL-----------TNIWLELPLMVFGVLGLVAGGLVLLLPETKGKALPE 524
Cdd:TIGR00887 447 GFLYLaqhgdptkgypTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEE 498
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
158-460 7.95e-08

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 54.70  E-value: 7.95e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITE-FVGRRYRRT 236
Cdd:TIGR00710  51 LGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDiYPGEELSRI 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  237 VGIFYQVAYTVGLLVLAGVAYALPH--WRWLQFTVSLPNFFF-LLYYWCIPES--PRWLISQNKNAEamriikhiakkng 311
Cdd:TIGR00710 131 YSILMPVLALAPAVAPLLGGYILVWlsWHAIFAFLSLAGILLsALIFFILPETlpYEARIQISTYFE------------- 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  312 kslpaslqrlrleeetgkklnpSFLDLVRTPQIRKHTMIL------MYNWFT-SSVLYQGLimhMGLAGDNIYLDFFYSA 384
Cdd:TIGR00710 198 ----------------------TFLLLLKSKMFWGYALIYgasfggFFAFFSgAPFVYIDI---MGVSPSVFGLLFALNI 252
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 302148518  385 LVEFPAAFMIILTIDRIGRR--YPWAASNMVAGAACLASVFIPGDLQWLKII-ISCLGRMGITMAYEIVCLVNAELYPT 460
Cdd:TIGR00710 253 IAMIFGGFLNGRFIKKWGAKslLRMGLILFAVSAVLLEITAILGLGSWAMIIgPMMFVGIGNSMISSIAMAYALEDFPH 331
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
134-284 8.57e-08

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 54.47  E-value: 8.57e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 134 SIVTEFNLvcaNSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLV 213
Cdd:COG0738   33 ALKDAFGL---SDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALAPSYPLLLLALFLLGLG 109
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 302148518 214 SKAGWLIGYILITEfVGRRYRRTVGIFYQVAYTVGLLVLAGVAYAL------PHWRWLQFTVSLPNFFFLLYYWCIP 284
Cdd:COG0738  110 LGLLDVAANPYVAA-LGPETAASRLNLLHAFFSLGALLGPLLGGLLillglsLSWHLPYLILAVLLLLLALLFLRSK 185
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
154-264 1.09e-07

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 54.30  E-value: 1.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:TIGR00881  37 SSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE 116
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 302148518  234 RRTVGIFYQVAYTVGL-----LVLAGVAYalpHWRW 264
Cdd:TIGR00881 117 RGTWVSFWNCSHNVGGgllppLVLFGIAE---LYSW 149
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
135-214 3.16e-07

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 52.58  E-value: 3.16e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 135 IVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVS 214
Cdd:cd17330   22 YVREFNKLGASGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLTG 101
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
154-264 4.32e-07

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 52.20  E-value: 4.32e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:cd17365   41 SAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARR 120
                         90       100       110
                 ....*....|....*....|....*....|...
gi 302148518 234 RRTVGIFYQVAYTVGlLVLAGV--AYALPHWRW 264
Cdd:cd17365  121 RSLAVTLMFCGYPLG-AALGGFlaAALIPAFGW 152
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
155-289 5.25e-07

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 52.02  E-value: 5.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 155 SVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYR 234
Cdd:cd17437   40 SLNIISLVGSLAAGRTSDWIGRRYTIALAALIFFVGALLMGVAPNYPVLMVGRFVAGIGVGFALMIAPVYTAEVAPASSR 119
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 302148518 235 RTVGIFYQVAYTVGLLVLAGVAYA---LP---HWRWLQFTVSLPNFFFLLYYWCIPESPRW 289
Cdd:cd17437  120 GFLTSFPEIFINIGILLGYVSNYAfsgLPlhvGWRLMLGVGAVPSLFLAIGVLAMPESPRW 180
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
168-272 1.03e-06

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 51.04  E-value: 1.03e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 168 GYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTV 247
Cdd:cd17503   52 GWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFGGGVLIPLAQTILLRIYPPEKRGAAMGLVGLVILL 131
                         90       100
                 ....*....|....*....|....*...
gi 302148518 248 GLLV---LAGVAYALPHWRWLqFTVSLP 272
Cdd:cd17503  132 APAIgptLGGWLTDNLSWRWI-FYINLP 158
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
167-300 1.09e-06

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 51.03  E-value: 1.09e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 167 IGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITE-FVGRryRRTVGIFYQVAY 245
Cdd:cd17473   55 AGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDyFEGE--ERAKMLGLQSAA 132
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 302148518 246 T----VGLLVLAGVAYALpHWRW--LQFTVSLPnfFFLLYYWCIPESPRWLISQNKNAEAM 300
Cdd:cd17473  133 MslggVVFLLLGGALAEI-GWRApfLVYLLALP--VLILVLLFLPEPARKSKSAASPGAAT 190
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
156-283 1.10e-06

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 50.68  E-value: 1.10e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 156 VNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTY--TWMLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:cd17316  222 ISLGALVGALIAGLLSDRIGRKKTLVIGLILSGILALPLFYLLSGspTLLLLLLFILSFFVGGVWGALYAYLAELFPTEV 301
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 302148518 234 RRT-VGIFYQVAYTVGllvlAGVAYALPHWRWLQFTVSLPNFFFLLYYWCI 283
Cdd:cd17316  302 RATgVGLSYNLGRLGG----GGAPPLIALLLASTGGTGVPALILALLAIVA 348
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
158-264 4.43e-06

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 49.08  E-value: 4.43e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYR-RT 236
Cdd:cd17324   45 LGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVPPEKRgRA 124
                         90       100       110
                 ....*....|....*....|....*....|.
gi 302148518 237 VGIfYQVAYTVGLLV---LAGVAYALPHWRW 264
Cdd:cd17324  125 IGL-VFSGLTLGLVLgrpLGGLLGQLLGWRA 154
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
151-264 5.51e-06

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 48.71  E-value: 5.51e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 151 LFQSSVNVGFFIGSMSIGYIADRFGR--KLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEF 228
Cdd:COG2271  220 LLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAEL 299
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 302148518 229 VGRRYR-RTVGIFYQVAYTVGLL--VLAGVAYALPHWRW 264
Cdd:COG2271  300 FPKKARgTASGLVNTFGFLGGALgpLLVGYLLDATGYQA 338
MFS_GLUT10_Class3 cd17436
Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
137-287 8.33e-06

Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 10 (GLUT10) is also called Solute carrier family 2, facilitated glucose transporter member 10 (SLC2A10). It is classified as a Class 3 GLUT and is a facilitative glucose transporter that exhibits a wide tissue distribution. It is expressed in pancreas, placenta, heart, lung, liver, brain, fat, muscle, and kidney. GLUT10 facilitates the transport of dehydroascorbic acid (DHA), the oxidized form of vitamin C, into mitochondria, and also increases cellular uptake of DHA, which in turn protects cells against oxidative stress. Loss-of-function mutations in SLC2A10 cause arterial tortuosity syndrome (ATS), an autosomal recessive connective tissue disorder characterized by twisting and lengthening of the major arteries, hypermobility of the joints, and laxity of skin. The GLUT10 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340994 [Multi-domain]  Cd Length: 376  Bit Score: 48.26  E-value: 8.33e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 137 TEFNLVCANSWMLdlfQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKA 216
Cdd:cd17436   29 TDFSLSCFEQEAL---VSALLIGALLASLIGGFLIDRHGRRTSILGSNLVLLAGSLILTLAGSFFWLVIGRAVVGFAISV 105
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 217 GWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH----WRWLQFTVSLPNFFFLLYYWCIPESP 287
Cdd:cd17436  106 SSMACCIYVSEMVTPHQRGLLVSLYEAGITVGILISYALNYFFSNvltgWRYMFGLAIIPAAIQFASILLLPKKP 180
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
151-264 8.38e-06

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 48.39  E-value: 8.38e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 151 LFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITE-FV 229
Cdd:cd17328   38 LLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIGEASYSPIAPTIIADlFP 117
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 302148518 230 GRRYRRTVGIFY---QVAYTVGLLVLAGVAYALPHWRW 264
Cdd:cd17328  118 KEKRTRALGVFYfaiPLGSGLGYVVGGLVAQATGGWRW 155
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
167-269 1.14e-05

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 47.57  E-value: 1.14e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 167 IGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGlVSKAGWLIGYILITE-FVGRRYRRTVGIF---YQ 242
Cdd:cd17504   51 LGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLIAGRALQG-IGGAVFPLAFALVREeFPPERVPVAQGILsatFG 129
                         90       100
                 ....*....|....*....|....*..
gi 302148518 243 VAYTVGLLvLAGVAYALPHWRWLQFTV 269
Cdd:cd17504  130 IGAGIGLP-LGGWIVQHLGWRWIFWTA 155
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
149-271 1.50e-05

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 47.20  E-value: 1.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 149 LDLFQSSVNVGFFIGSMSI---------GYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWL 219
Cdd:cd17489   24 HDLGGSEAVAGLVVGLFTLaallarpfaGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIGWGAFTT 103
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 302148518 220 IGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWR--WLQFTVSL 271
Cdd:cd17489  104 AAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLgfAVLFIVAA 157
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
158-264 1.77e-05

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 47.37  E-value: 1.77e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFF---IGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYT--------WMLIFRLIQGLVS--KAGWLIGYIL 224
Cdd:cd17368   48 VGFFmrpIGAIVLGAYADRIGRKPAMTLTLAIMALGTLLIALAPTYAtigiaaplLVLLARLLQGFAAggEVGGVTAYLV 127
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 302148518 225 ITEFVGRRYrrtvgiFY--------QVAYTVGLLVLAGVAYALPH-----WRW 264
Cdd:cd17368  128 EAAPPGRRG------FYtswqsasqQVAIVAGALVGYLLSLTLTAealaeWGW 174
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
135-282 4.39e-05

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 45.63  E-value: 4.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 135 IVTEFNLVCANSWmldlfqssVNVGFFIGSMSI----GYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQ 210
Cdd:cd17502   22 IVAEFGGLSLVSW--------VGTAYLLTSTAFqpiyGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQ 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 211 GLvsKAGWLIG--YILITEFVGRRYRRTV----GIFYQVAYTVGLLvLAGVAYALPHWRWLqFTVSLP----NFFFLLYY 280
Cdd:cd17502   94 GI--GGGGLMSlaFIIIADLVPPRERGKYqgyiGAVFGIASVAGPL-IGGAFTDHLSWRWC-FYINLPigglALALLRTI 169

                 ..
gi 302148518 281 WC 282
Cdd:cd17502  170 LL 171
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
168-272 5.10e-05

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 45.83  E-value: 5.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518  168 GYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVskAGWLIGY---ILITEFVGRRyRRTVGIFYQVA 244
Cdd:TIGR00711  58 GWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFG--GGPLIPLsfsTLLNIYPPEK-RGRAMAIWGLT 134
                          90       100       110
                  ....*....|....*....|....*....|.
gi 302148518  245 YTVGLLV---LAGVAYALPHWRWLqFTVSLP 272
Cdd:TIGR00711 135 VLVAPALgptLGGWIIENYHWRWI-FLINVP 164
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
154-280 5.49e-05

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 45.68  E-value: 5.49e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGF-FIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVsKAGWLIGYILITEFVGRR 232
Cdd:cd17390   37 GSVYGALqLFSSPLVGSWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLFLSRIPLGIF-KHTQSLCKAYLSDLVSEQ 115
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 302148518 233 YRRTV--------------------------GIFYQVAYTVGLLVL--AGVAYALPHWRWLQFTVS-LPNFFFLLYY 280
Cdd:cd17390  116 ERSRVlgrfnaasslgfilgpvvgghlaetdGGFYYVALLCSAIFIlnAGLVWFLLSKLWDLLLVRfLMGFSVLLFR 192
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
133-264 7.43e-05

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 45.30  E-value: 7.43e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 133 SSIVTEFNLVCANSWMLDLFQSSVNVG---------FFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAI-----SP 198
Cdd:cd06173   11 SALGDWIFTVALPWLVLQLTGSALLVGlvlaafflpFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALlallgSL 90
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 302148518 199 TYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLV---LAGVAYALPHWRW 264
Cdd:cd06173   91 SLWLLLVLAFLLGIASAFFGPARQALLPELVPKEQLVRANALNSLATQLARIIgpaLGGLLVALLGPGG 159
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
158-285 7.46e-05

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 45.26  E-value: 7.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTV 237
Cdd:cd17323   45 LGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALAPNIAMLIILRFLQGFFGSSPLAIGAGTIADLFTPEERGKA 124
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 302148518 238 GIFYQVAYTVGLL---VLAGVAYALPHWRWLQ-FTVSLPNFFFLLYYWCIPE 285
Cdd:cd17323  125 MGVYSLGPLLGPAlgpIIGGFITQSLGWRWIFwFLAIISGFCLILIFLFLPI 176
MFS_GLUT12_Class3 cd17435
Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
154-294 7.48e-05

Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 12 (GLUT12) is also called Solute carrier family 2, facilitated glucose transporter member 12 (SLC2A12). It is a facilitative glucose transporter, classified as a Class 3 GLUT, and is expressed in the heart, skeletal muscle, prostate, and small intestine, and is highly upregulated in breast ductal cell carcinoma. It plays a role as a secondary insulin-sensitive glucose transporter in insulin-dependent tissues. The GLUT12 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340993 [Multi-domain]  Cd Length: 376  Bit Score: 45.17  E-value: 7.48e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:cd17435   43 SSLLIGALLASLTGGVLIDRYGRRTAIILTSCLLVLGSLLLVCSVSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHR 122
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 234 RRTVGIFYQVAYTVGLLVLAGVAYA---LPH-WRWLQFTVSLPNFFFLLYYWCIPESPRWLISQN 294
Cdd:cd17435  123 RGLLVSLNELMIVIGILLAYISNYAfanVSNgWKYMFGLVIPLAALQAIAMYFLPPSPRFLVMKD 187
MFS_STP cd17361
Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; ...
145-287 9.83e-05

Plant Sugar transport protein subfamily of the Major Facilitator Superfamily of transporters; The plant Sugar transport protein (STP) subfamily includes STP1-STP14; they are also called hexose transporters. They mediate the active uptake of hexoses such as glucose, 3-O-methylglucose, fructose, xylose, mannose, galactose, fucose, 2-deoxyglucose and arabinose, by sugar/hydrogen symport. Several STP family transporters are expressed in a tissue-specific manner, or at specific developmental stages. STP1 is the member with the highest expression level of all members and high expression is detected in photosynthetic tissues, such as leaves and stems, while roots, siliques, and flowers show lower expression levels. It plays a major role in the uptake and response of Arabidopsis seeds and seedlings to sugars. The STP subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340919 [Multi-domain]  Cd Length: 390  Bit Score: 44.93  E-value: 9.83e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 145 NSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTyTWMLIF-RLIQGLVSKAGWLIGYI 223
Cdd:cd17361   49 DDQLLQLFTSSLYLAGLVASLLASYVTRKWGRKPSMLIGGVLFLVGAALNAAAQN-IAMLIVgRILLGFGVGFGNQAVPL 127
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 302148518 224 LITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH-----WRWLQFTVSLPNFFFLLYYWCIPESP 287
Cdd:cd17361  128 YLSEMAPAKLRGALNIGFQLAITIGILIANLINYGTSKikpngWRLSLGLAAVPALILLLGSLFLPETP 196
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
155-285 1.01e-04

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 44.96  E-value: 1.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 155 SVNVGFFIGSMS----------IGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLvSKAGWLIGYIL 224
Cdd:cd17389   62 SVLFGGLIGSLFsllqflsspiTGAASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGI-SKGNVSLSTAI 140
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 225 ITEFVGRRYRR----TVGIFYQVAYTVGLLV----------LAGVAYALPhwRWLQFTVSLPNFFFLlyYWCIPE 285
Cdd:cd17389  141 VADVTSPKKRSkgmaLIGVAFSLGFIIGPMIgayfasftrsLGEVFFSMP--ALFALVLALADLLFI--FFFLPE 211
MFS_ProP cd17366
Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This ...
162-279 2.23e-04

Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of Escherichia coli proline/betaine transporter, also called proline porter II (PPII), and similar proteins. ProP is a proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in the bacterial osmoregulatory response. The ProP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340924 [Multi-domain]  Cd Length: 377  Bit Score: 43.50  E-value: 2.23e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 162 IGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYT----W----MLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:cd17366   55 LGGLVFGPLGDKYGRQKVLAITIILMAASTFCIGLLPTYAtigvWapilLLLARMVQGFSTGGEYGGAATFVAEYAPDRK 134
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 302148518 234 RRTVGIFYQ----VAYTVGLLVLAGVAYALPH-----WRW-LQFTVSLPNFFFLLY 279
Cdd:cd17366  135 RGFLGSWLEfgtlAGFILGAGLVTLLTLLLTEaqmldWGWrIPFLIAAPLGLVGLY 190
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
167-447 3.87e-04

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 42.97  E-value: 3.87e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 167 IGYIADRFGRKLC-----LLTTVLINAAAGVLMAISPT----------YTWMLIFRLIQGLVSKAGWLIGYILITEFVGR 231
Cdd:COG2211   66 IGALSDRTRTRWGrrrpwILIGAIPLALSFVLLFTAPDlsptgkliyaLVTYLLLGLAYTLVNIPYSALGAELTPDYEER 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 232 ----RYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLLYYWCIpesprwlisqnknaeamriikhia 307
Cdd:COG2211  146 trlsSWRFAFAGLGGLLASVLPPPLVAAFGGDAALGYRLTALIFAVLGLLAFLLTF------------------------ 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 308 kkngkslpASLQRLRLEEETGKKLNPSFLDLVRTPQIRKHTMILMYNWFTSSVLYQGLI----MHMGLAGDNIYLDFFYS 383
Cdd:COG2211  202 --------FGTKERPVPEEEKVSLKESLKALLKNRPFLLLLLAYLLFFLALALVAALLLyyfkYVLGLSAALVGLLLALY 273
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 302148518 384 ALVEFPAAFMIILTIDRIGRRYPWAASNMVAGAACLASVFIPGDLQWLKIIISCLGRMGITMAY 447
Cdd:COG2211  274 FLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAIL 337
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
154-283 4.08e-04

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 42.94  E-value: 4.08e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRY 233
Cdd:cd17319   45 SAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAEAGFFPGAIKALAEWFPARE 124
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 302148518 234 R-RTVGIFYQVAYTVGLLVLAGVAYALPH--WRWLQFTVSLPNFFFLLYYWCI 283
Cdd:cd17319  125 RgRATGLFNSGAPLGAAIGPPLSGWLLLLfgWRWAFIIEGLLGLLLAVLWWFY 177
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
168-223 5.03e-04

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 42.64  E-value: 5.03e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 302148518 168 GYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSkagwliGYI 223
Cdd:cd17391   57 GRLADRYGRKPMLLRASLGMAIVIGLMAFVTNVWQLLILRLLQGVFS------GYV 106
PRK09952 PRK09952
shikimate transporter; Provisional
135-248 5.36e-04

shikimate transporter; Provisional


Pssm-ID: 182163 [Multi-domain]  Cd Length: 438  Bit Score: 42.41  E-value: 5.36e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 135 IVTEF--NLVCANSWM-LDLFqssVNVGFFIGSMSIG------YIADRFGRKLCLLTTVLINAAAGV--LMAI-SPTYTW 202
Cdd:PRK09952 268 IVTAFalNYSTQNLGLpRELF---LNIGLLVGGLSCLtipcfaWLADRFGRRRVYITGALIGTLSAFpfFMALeAQSIFW 344
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 302148518 203 MLIFRLIqgLVSKAGWLIGYI---LITEFVGRRYRRT-VGIFYQVAYTVG 248
Cdd:PRK09952 345 IVFFSIM--LANIAHDMVVCVqqpMFTEMFGASYRYSgAGVGYQVASVVG 392
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
147-292 6.99e-04

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 41.88  E-value: 6.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 147 WMLDLFQSSVNVGFFIGsmsiGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILIT 226
Cdd:cd17312   42 IIGSAFLIAYAVGKFIS----GFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGLFQSMGWPPCVKLLG 117
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 302148518 227 EFVGRRYRRTVGIFYQVAYTVGLLV---LAGVAYALPHWRW-------LQFTVSLPNFFFLLyywcipESPR--WLIS 292
Cdd:cd17312  118 NWFSKKERGTVYGIWSTSHNFGGILapiLAASLASYYGWRAaflvpgiVGLVVAIILFFFLR------DSPPyvWVLS 189
MFS_GlpT cd17345
Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; ...
154-267 8.99e-04

Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340903 [Multi-domain]  Cd Length: 411  Bit Score: 41.84  E-value: 8.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRK----LCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFV 229
Cdd:cd17345   45 SALSIAYGLSKFVMGNLSDRSNPKrflaIGLILSAIINILIGFVPSATSSVGLMFILLFLNGWFQGMGWPPSGRTMVHWF 124
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 302148518 230 GRRYRRTVGIFYQVAYTVG-----LLVLAGVAYALPHWRWLQF 267
Cdd:cd17345  125 SKKERGTWTSIWNISHNVGgglvgPLAGLGLAIFGDGWWRGAF 167
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
158-251 1.24e-03

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 41.39  E-value: 1.24e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGRRYR-RT 236
Cdd:cd17477   42 LGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWFLLRFVMGIGLAGLFVVSESWLNALATNENRgRV 121
                         90
                 ....*....|....*
gi 302148518 237 VGIfYQVAYTVGLLV 251
Cdd:cd17477  122 LGL-YSTVLGLGFAL 135
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
154-212 1.64e-03

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 41.11  E-value: 1.64e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 154 SSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYT------WMLIFRLIQGL 212
Cdd:cd17364   46 AAALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMIIGTILSALSPGSTplgvmgWLIFFRFLLGI 110
PRK10091 PRK10091
MFS transport protein AraJ; Provisional
159-282 2.15e-03

MFS transport protein AraJ; Provisional


Pssm-ID: 182234 [Multi-domain]  Cd Length: 382  Bit Score: 40.46  E-value: 2.15e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 159 GFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYIlITEFVGRRYRRTVG 238
Cdd:PRK10091  50 GVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAI-VLSKIIKPGKVTAA 128
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 302148518 239 IFYQVA-YTVGLLVLAGVAYALPH---WRWLQFTVSLPNFFFLLYYWC 282
Cdd:PRK10091 129 VAGMVSgMTVANLLGIPLGTYLSQefsWRYTFLLIAVFNIAVLASIYF 176
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
160-206 2.51e-03

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 40.23  E-value: 2.51e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 302148518 160 FFIGSMS----IGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIF 206
Cdd:cd17477  232 FVLGGLLlqwpLGWLADRFDRRRVLLGCALLGALAALLLPLVPGLPLALLV 282
PRK10406 PRK10406
alpha-ketoglutarate transporter; Provisional
159-212 2.63e-03

alpha-ketoglutarate transporter; Provisional


Pssm-ID: 182433 [Multi-domain]  Cd Length: 432  Bit Score: 40.56  E-value: 2.63e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 159 GFF---IGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTY----TW----MLIFRLIQGL 212
Cdd:PRK10406  72 GFLmrpIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYetigTWapalLLLARLFQGL 136
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
151-279 3.22e-03

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 40.10  E-value: 3.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 151 LFQSSVNVGFFIGSMSIGYIADR-FGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFV 229
Cdd:cd06174  243 LLLSLFGLAGALGSLLLGLLSDRlIGRKPLLLIGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELF 322
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 302148518 230 GRRYRRTV-GIFYQVAYTVGLLVLAGVAYALPHWRWLQFTVSLPNFFFLLY 279
Cdd:cd06174  323 PPEIRGTAfGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLLLA 373
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
158-212 4.04e-03

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 39.88  E-value: 4.04e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 302148518 158 VGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGL 212
Cdd:PRK11043  52 AGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAV 106
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
151-241 4.88e-03

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 39.50  E-value: 4.88e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 151 LFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISP--TYTWMLIFRLIQGLVSKAGWLIGYILITEF 228
Cdd:COG2211  268 LLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLLLFFLGpgNLWLLLVLAALAGIGLGAILVLPWAMLADV 347
                         90
                 ....*....|....*..
gi 302148518 229 V----GRRYRRTVGIFY 241
Cdd:COG2211  348 VdydeWKTGRRREGLYF 364
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
159-217 5.03e-03

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 39.51  E-value: 5.03e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 302148518 159 GFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAG 217
Cdd:PRK11102  38 GFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAA 96
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
147-264 7.96e-03

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 38.79  E-value: 7.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 147 WMLDLFQSSVNVGFF---IGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWM-LIFRLIQGLVSKAGWL-IG 221
Cdd:cd17355   35 WSRAVISLAFTVGLLafgLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWQLyLLWGLLGGGGAGTLAAvAF 114
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 302148518 222 YILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPHWRW 264
Cdd:cd17355  115 ATVAAWWFERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGW 157
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
167-288 9.26e-03

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 38.65  E-value: 9.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 302148518 167 IGYIADRFGRKLCLLTTVLINAAAGVLMAISPTYTWMLIFRLIQGLVSKAGWLIGYILITEFVGrryrRTVGIFYQVAYT 246
Cdd:PRK15403  71 LGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFG----QTKGIKLMAIIT 146
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 302148518 247 VGLLV------LAGVA-YALPHWRWLqFTV----SLPNFFFLLYywCIPESPR 288
Cdd:PRK15403 147 SIVLVapiigpLSGAAlMHFVHWKVL-FAIiavmGLIAFVGLLL--AMPETVK 196
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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