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Conserved domains on  [gi|6319351|ref|NP_009434|]
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acid phosphatase PHO11 [Saccharomyces cerevisiae S288C]

Protein Classification

histidine phosphatase family protein( domain architecture ID 10448333)

histidine phosphatase family protein contains a conserved His residue that is transiently phosphorylated during the catalytic cycle; similar to acid phosphatases and phytase A/B

CATH:  3.40.50.1240
EC:  3.1.3.-
Gene Ontology:  GO:0016791
PubMed:  18092946|31707654
SCOP:  3000781

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
His_Phos_2 pfam00328
Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so ...
65-399 1.75e-67

Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.


:

Pssm-ID: 395259 [Multi-domain]  Cd Length: 356  Bit Score: 219.97  E-value: 1.75e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351     65 EMKQVQMVGRHGERYPTVSKAKSIMTTWYKLSNYTGQFSGALSFLNDdYEFFirdTKNLEMETTlansvnVLNPYtGEMN 144
Cdd:pfam00328   1 ELEQVQVVSRHGDRTPTQKFKKSYESLIFKILSLAGSLEGKLSFPGD-YRYF---KLQYTLGWG------GLTPS-GRVQ 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    145 AKRHARDFLAQYGY----MVENQTSFAVFTSNSNRCHDTAQYFIDGL------------GDKFNISLQTISEAESAGAN- 207
Cdd:pfam00328  70 AENLGRYFRQRYVGgllrDGYNAKDIYIRASSEGRVIASAQAFAEGLfgpegedvdkdlLDDSNVAKVTIDEDKKALANn 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    208 TLSAHHSCPAWDDDVN-----DDILKKYDTKYLSGIAKRLNKENKG-LNLTSSDANTFFAWCAYEINARGYSDICNIFTK 281
Cdd:pfam00328 150 LTAGYCSCPAFEWPLQllkqvDEALDYYLPVFLEPIAKRLEQLCPGeTNLTADDVWALLFLCFFETNKADLSPFCDLFTE 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    282 DELVRFSYGQDLETYYQ-TGPGYDVVRSVGANLFNASVKLLKESEVQDQ--------KVWLSFTHDTDILNYLTTIGIID 352
Cdd:pfam00328 230 EDALHNEYLLDLEEYYGlAGIGNELKKTIGGPLLNELLARLTNDLVCTQeatfpldaKLYLYFTHDTTIYSLLSALGLFD 309
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 6319351    353 DKNNLTAEHVPfmeNTFHRSWYVPQGARVYTEKFQCSND---TYVRYVIN 399
Cdd:pfam00328 310 DLPPLSSLRVL---DGYSASGEVPYGARLVFELYECSSEkdsRYVRLLLN 356
 
Name Accession Description Interval E-value
His_Phos_2 pfam00328
Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so ...
65-399 1.75e-67

Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.


Pssm-ID: 395259 [Multi-domain]  Cd Length: 356  Bit Score: 219.97  E-value: 1.75e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351     65 EMKQVQMVGRHGERYPTVSKAKSIMTTWYKLSNYTGQFSGALSFLNDdYEFFirdTKNLEMETTlansvnVLNPYtGEMN 144
Cdd:pfam00328   1 ELEQVQVVSRHGDRTPTQKFKKSYESLIFKILSLAGSLEGKLSFPGD-YRYF---KLQYTLGWG------GLTPS-GRVQ 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    145 AKRHARDFLAQYGY----MVENQTSFAVFTSNSNRCHDTAQYFIDGL------------GDKFNISLQTISEAESAGAN- 207
Cdd:pfam00328  70 AENLGRYFRQRYVGgllrDGYNAKDIYIRASSEGRVIASAQAFAEGLfgpegedvdkdlLDDSNVAKVTIDEDKKALANn 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    208 TLSAHHSCPAWDDDVN-----DDILKKYDTKYLSGIAKRLNKENKG-LNLTSSDANTFFAWCAYEINARGYSDICNIFTK 281
Cdd:pfam00328 150 LTAGYCSCPAFEWPLQllkqvDEALDYYLPVFLEPIAKRLEQLCPGeTNLTADDVWALLFLCFFETNKADLSPFCDLFTE 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    282 DELVRFSYGQDLETYYQ-TGPGYDVVRSVGANLFNASVKLLKESEVQDQ--------KVWLSFTHDTDILNYLTTIGIID 352
Cdd:pfam00328 230 EDALHNEYLLDLEEYYGlAGIGNELKKTIGGPLLNELLARLTNDLVCTQeatfpldaKLYLYFTHDTTIYSLLSALGLFD 309
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 6319351    353 DKNNLTAEHVPfmeNTFHRSWYVPQGARVYTEKFQCSND---TYVRYVIN 399
Cdd:pfam00328 310 DLPPLSSLRVL---DGYSASGEVPYGARLVFELYECSSEkdsRYVRLLLN 356
HP_HAP_like cd07061
Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His ...
65-399 4.90e-54

Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction; Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been shown in mouse models to suppress pain by functioning as an ecto-5prime-nucleotidase. In vivo it dephosphorylates extracellular adenosine monophosphate (AMP) generating adenosine,and leading to the activation of A1-adenosine receptors in dorsal spinal cord.


Pssm-ID: 132717 [Multi-domain]  Cd Length: 242  Bit Score: 181.03  E-value: 4.90e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351   65 EMKQVQMVGRHGERYPtvskaksimttwyklsnytgqfsgalsflnddyeffirdtknlEMETTlansvnvlnpyTGEMN 144
Cdd:cd07061   1 ELEQVQVLSRHGDRYP-------------------------------------------GELTP-----------FGRQQ 26
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351  145 AKRHARDFLAQYGYM----VENQTSFAVFTSNSNRCHDTAQYFIDGL---GDKFNISLQTISEAESagantlsahhscpa 217
Cdd:cd07061  27 AFELGRYFRQRYGELlllhSYNRSDLYIRSSDSQRTLQSAQAFLAGLfppDGWQPIAVHTIPEEED-------------- 92
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351  218 wdddvnddilkkydtkylsgiakrlnkenkglnltssDANTFFAWCAYEINARGYSDI-CNIFTKDELVRFSYGQDLETY 296
Cdd:cd07061  93 -------------------------------------DVSNLFDLCAYETVAKGYSAPfCDLFTEEEWVKLEYLNDLKFY 135
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351  297 YQTGPGYDVVRSVGANLFNASVKLLKESEVQ------DQKVWLSFTHDTDILNYLTTIGIIDDKNNLTaehvPFMENTFH 370
Cdd:cd07061 136 YGYGPGNPLARAQGSPLLNELLARLTNGPSGsqtfplDRKLYLYFSHDTTILPLLTALGLFDFAEPLP----PDFLRGFS 211
                       330       340       350
                ....*....|....*....|....*....|.
gi 6319351  371 RSWYVPQGARVYTEKFQCS--NDTYVRYVIN 399
Cdd:cd07061 212 ESDYPPFAARLVFELWRCPgdGESYVRVLVN 242
 
Name Accession Description Interval E-value
His_Phos_2 pfam00328
Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so ...
65-399 1.75e-67

Histidine phosphatase superfamily (branch 2); The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.


Pssm-ID: 395259 [Multi-domain]  Cd Length: 356  Bit Score: 219.97  E-value: 1.75e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351     65 EMKQVQMVGRHGERYPTVSKAKSIMTTWYKLSNYTGQFSGALSFLNDdYEFFirdTKNLEMETTlansvnVLNPYtGEMN 144
Cdd:pfam00328   1 ELEQVQVVSRHGDRTPTQKFKKSYESLIFKILSLAGSLEGKLSFPGD-YRYF---KLQYTLGWG------GLTPS-GRVQ 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    145 AKRHARDFLAQYGY----MVENQTSFAVFTSNSNRCHDTAQYFIDGL------------GDKFNISLQTISEAESAGAN- 207
Cdd:pfam00328  70 AENLGRYFRQRYVGgllrDGYNAKDIYIRASSEGRVIASAQAFAEGLfgpegedvdkdlLDDSNVAKVTIDEDKKALANn 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    208 TLSAHHSCPAWDDDVN-----DDILKKYDTKYLSGIAKRLNKENKG-LNLTSSDANTFFAWCAYEINARGYSDICNIFTK 281
Cdd:pfam00328 150 LTAGYCSCPAFEWPLQllkqvDEALDYYLPVFLEPIAKRLEQLCPGeTNLTADDVWALLFLCFFETNKADLSPFCDLFTE 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351    282 DELVRFSYGQDLETYYQ-TGPGYDVVRSVGANLFNASVKLLKESEVQDQ--------KVWLSFTHDTDILNYLTTIGIID 352
Cdd:pfam00328 230 EDALHNEYLLDLEEYYGlAGIGNELKKTIGGPLLNELLARLTNDLVCTQeatfpldaKLYLYFTHDTTIYSLLSALGLFD 309
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 6319351    353 DKNNLTAEHVPfmeNTFHRSWYVPQGARVYTEKFQCSND---TYVRYVIN 399
Cdd:pfam00328 310 DLPPLSSLRVL---DGYSASGEVPYGARLVFELYECSSEkdsRYVRLLLN 356
HP_HAP_like cd07061
Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His ...
65-399 4.90e-54

Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction; Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been shown in mouse models to suppress pain by functioning as an ecto-5prime-nucleotidase. In vivo it dephosphorylates extracellular adenosine monophosphate (AMP) generating adenosine,and leading to the activation of A1-adenosine receptors in dorsal spinal cord.


Pssm-ID: 132717 [Multi-domain]  Cd Length: 242  Bit Score: 181.03  E-value: 4.90e-54
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351   65 EMKQVQMVGRHGERYPtvskaksimttwyklsnytgqfsgalsflnddyeffirdtknlEMETTlansvnvlnpyTGEMN 144
Cdd:cd07061   1 ELEQVQVLSRHGDRYP-------------------------------------------GELTP-----------FGRQQ 26
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351  145 AKRHARDFLAQYGYM----VENQTSFAVFTSNSNRCHDTAQYFIDGL---GDKFNISLQTISEAESagantlsahhscpa 217
Cdd:cd07061  27 AFELGRYFRQRYGELlllhSYNRSDLYIRSSDSQRTLQSAQAFLAGLfppDGWQPIAVHTIPEEED-------------- 92
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351  218 wdddvnddilkkydtkylsgiakrlnkenkglnltssDANTFFAWCAYEINARGYSDI-CNIFTKDELVRFSYGQDLETY 296
Cdd:cd07061  93 -------------------------------------DVSNLFDLCAYETVAKGYSAPfCDLFTEEEWVKLEYLNDLKFY 135
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351  297 YQTGPGYDVVRSVGANLFNASVKLLKESEVQ------DQKVWLSFTHDTDILNYLTTIGIIDDKNNLTaehvPFMENTFH 370
Cdd:cd07061 136 YGYGPGNPLARAQGSPLLNELLARLTNGPSGsqtfplDRKLYLYFSHDTTILPLLTALGLFDFAEPLP----PDFLRGFS 211
                       330       340       350
                ....*....|....*....|....*....|.
gi 6319351  371 RSWYVPQGARVYTEKFQCS--NDTYVRYVIN 399
Cdd:cd07061 212 ESDYPPFAARLVFELWRCPgdGESYVRVLVN 242
HP cd07040
Histidine phosphatase domain found in a functionally diverse set of proteins, mostly ...
69-201 6.12e-05

Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction; Catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This set of proteins includes cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, histidine acid phosphatases, phytases, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system; phytases scavenge phosphate from extracellular sources. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG. Clinical applications include the use of prostatic acid phosphatase (PAP) as a serum marker for prostate cancer. Agricultural applications include the addition of phytases to animal feed.


Pssm-ID: 132716 [Multi-domain]  Cd Length: 153  Bit Score: 43.17  E-value: 6.12e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6319351   69 VQMVGRHGERYPTVSKaksimttwyklsNYTGQFSGALSflnddyeffirdtknlemettlansvnvlnpYTGEMNAKRH 148
Cdd:cd07040   1 VLYLVRHGEREPNAEG------------RFTGWGDGPLT-------------------------------EKGRQQAREL 37
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|...
gi 6319351  149 ARDFLAQYgymvenQTSFAVFTSNSNRCHDTAQYFIDGLGDkfNISLQTISEA 201
Cdd:cd07040  38 GKALRERY------IKFDRIYSSPLKRAIQTAEIILEGLFE--GLPVEVDPRA 82
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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