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Conserved domains on  [gi|6321805|ref|NP_011881|]
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Ysc83p [Saccharomyces cerevisiae S288C]

Protein Classification

DUF1776 domain-containing protein( domain architecture ID 10554543)

DUF1776 domain-containing protein may belong to the classical SDR (short-chain dehydrogenase/reductase) family of NAD(P)-dependent oxidoreductases; similar to Saccharomyces cerevisiae UPF0744 protein YSC83

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1776 pfam08643
Fungal family of unknown function (DUF1776); This is a fungal family of unknown function. One ...
 106-359 5.31e-85

Fungal family of unknown function (DUF1776); This is a fungal family of unknown function. One of the proteins in this family Swiss:P32792 has been localized to the mitochondria.


:

Pssm-ID: 370028  Cd Length: 295  Bit Score: 260.05  E-value: 5.31e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    106 AESQVVLILGDMNDPIIRNQVMDLYRRRFTVYICTENADVYKKHeEDQDFIyYIDPTCEKD---------FEGFFVDVP- 175
Cdd:pfam08643   1 ARRQVVLVAGSPTEPLTRAIALDLERRGFIVFVTVTSAKDYKTV-ESEQRP-DIRPLSLDDtapssieasLEEFLQLLEt 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    176 -------------RLASILFMPRLSYhPSG---VISCDSLESEIHSSIFVYYQALLSIIPHLK---RKTQLIMFNPSLTA 236
Cdd:pfam08643  79 phvpfpgakphvlRLRGVILVPSLSY-PTGpieNIPPSSWASEFNSRLLNYYLTLQGLLPLLRsrsQKAQIIVFNPSISS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    237 DLNLVHHSTEIITSGIIDSLFKIFKEYQR---LNVSTIKLGILQIG-SQPSNYKFLRMAGSD------IHEALHYPVYKM 306
Cdd:pfam08643 158 SLNLPYHAPEALVSSALSTLFTTLKRELRphgIDVTQIKLGNLDLSnGSASNYKYLNIAGSEvlswseIMRALYGPNYVS 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6321805    307 IMSA-------NGYKLRQLLSWLTTLGG---YNSVYYCGRFSYLVSWpfaslIFNHHTRLSLK 359
Cdd:pfam08643 238 IQSKaigirstRGSSLRELHNALFDLLYgssPKPVVYCGKGARLYSW-----VGKWLPEWLLS 295
 
Name Accession Description Interval E-value
DUF1776 pfam08643
Fungal family of unknown function (DUF1776); This is a fungal family of unknown function. One ...
 106-359 5.31e-85

Fungal family of unknown function (DUF1776); This is a fungal family of unknown function. One of the proteins in this family Swiss:P32792 has been localized to the mitochondria.


Pssm-ID: 370028  Cd Length: 295  Bit Score: 260.05  E-value: 5.31e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    106 AESQVVLILGDMNDPIIRNQVMDLYRRRFTVYICTENADVYKKHeEDQDFIyYIDPTCEKD---------FEGFFVDVP- 175
Cdd:pfam08643   1 ARRQVVLVAGSPTEPLTRAIALDLERRGFIVFVTVTSAKDYKTV-ESEQRP-DIRPLSLDDtapssieasLEEFLQLLEt 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    176 -------------RLASILFMPRLSYhPSG---VISCDSLESEIHSSIFVYYQALLSIIPHLK---RKTQLIMFNPSLTA 236
Cdd:pfam08643  79 phvpfpgakphvlRLRGVILVPSLSY-PTGpieNIPPSSWASEFNSRLLNYYLTLQGLLPLLRsrsQKAQIIVFNPSISS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    237 DLNLVHHSTEIITSGIIDSLFKIFKEYQR---LNVSTIKLGILQIG-SQPSNYKFLRMAGSD------IHEALHYPVYKM 306
Cdd:pfam08643 158 SLNLPYHAPEALVSSALSTLFTTLKRELRphgIDVTQIKLGNLDLSnGSASNYKYLNIAGSEvlswseIMRALYGPNYVS 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6321805    307 IMSA-------NGYKLRQLLSWLTTLGG---YNSVYYCGRFSYLVSWpfaslIFNHHTRLSLK 359
Cdd:pfam08643 238 IQSKaigirstRGSSLRELHNALFDLLYgssPKPVVYCGKGARLYSW-----VGKWLPEWLLS 295
 
Name Accession Description Interval E-value
DUF1776 pfam08643
Fungal family of unknown function (DUF1776); This is a fungal family of unknown function. One ...
 106-359 5.31e-85

Fungal family of unknown function (DUF1776); This is a fungal family of unknown function. One of the proteins in this family Swiss:P32792 has been localized to the mitochondria.


Pssm-ID: 370028  Cd Length: 295  Bit Score: 260.05  E-value: 5.31e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    106 AESQVVLILGDMNDPIIRNQVMDLYRRRFTVYICTENADVYKKHeEDQDFIyYIDPTCEKD---------FEGFFVDVP- 175
Cdd:pfam08643   1 ARRQVVLVAGSPTEPLTRAIALDLERRGFIVFVTVTSAKDYKTV-ESEQRP-DIRPLSLDDtapssieasLEEFLQLLEt 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    176 -------------RLASILFMPRLSYhPSG---VISCDSLESEIHSSIFVYYQALLSIIPHLK---RKTQLIMFNPSLTA 236
Cdd:pfam08643  79 phvpfpgakphvlRLRGVILVPSLSY-PTGpieNIPPSSWASEFNSRLLNYYLTLQGLLPLLRsrsQKAQIIVFNPSISS 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6321805    237 DLNLVHHSTEIITSGIIDSLFKIFKEYQR---LNVSTIKLGILQIG-SQPSNYKFLRMAGSD------IHEALHYPVYKM 306
Cdd:pfam08643 158 SLNLPYHAPEALVSSALSTLFTTLKRELRphgIDVTQIKLGNLDLSnGSASNYKYLNIAGSEvlswseIMRALYGPNYVS 237

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 6321805    307 IMSA-------NGYKLRQLLSWLTTLGG---YNSVYYCGRFSYLVSWpfaslIFNHHTRLSLK 359
Cdd:pfam08643 238 IQSKaigirstRGSSLRELHNALFDLLYgssPKPVVYCGKGARLYSW-----VGKWLPEWLLS 295
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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