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Conserved domains on  [gi|6322674|ref|NP_012747|]
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Tpo5p [Saccharomyces cerevisiae S288C]

Protein Classification

AA_permease domain-containing protein( domain architecture ID 11992767)

AA_permease domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AA_permease pfam00324
Amino acid permease;
59-531 2.33e-83

Amino acid permease;


:

Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 269.19  E-value: 2.33e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674     59 GSIVGLGLGLMSpvLGMCTSMAIGLINGGPLTIMLGFLISGVCIWFSSLSLGEIVSKFPmeLHVGSAMLAPEKLKLVCSW 138
Cdd:pfam00324   1 HVQMIALGGVIG--TGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGP--VSGGFYTYASRFLGPSLGF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    139 YTGWLMLIgnwtmsTSITFAGAQLTISLILMTNSNLISEAHLIFYTVIVFYLVVTVVGLVNLKFARFIETInkVCVYWII 218
Cdd:pfam00324  77 ATGWNYWL------SWITVLALELTAASILIQFWELVPDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFW--FALIKII 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    219 YAIIFIDILLLVFHKGK------FRSLKYALFhfDNNLSGYKSafLSFIIGFQQSNFTLQGFSMLPALADEVKVPEKDIP 292
Cdd:pfam00324 149 AIIGFIIVGIILLSGGNpndgaiFRYLGDNGG--KNNFPPGFG--KGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIP 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    293 RGMSNAVLLSAFSGVIFLIPIMLILPDNDLLFTNHKV--LPIVNIFTKSTDSVVLSFFLVLLILGNLLFSGIGSITTSSR 370
Cdd:pfam00324 225 KAILQVIWRITIFYILSLLAIGLLVPWNDPGLLNDSAsaASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    371 AVYSFSRDQAIPyydkwTYVEPDSQSKVPKNSVVLSMIISYFLGLLALISTA-------AFNAFIGAAVLCLCSATFIPL 443
Cdd:pfam00324 305 MLYSLARDGLAP-----KFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAivfnfllAISGLSGLIVWGLISLSHLRF 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    444 VLVLFTRRRAIRSAPVKIRYKFGWFINIVSIVWLLLSMVSVCLPTQVPVTFKTMNYALMVYVFCILVITGLYFKWGKYNF 523
Cdd:pfam00324 380 RKAFKYQGRSIDELPFKAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNWGAGSFAAAYLIVLLFLIILIGVKLHV 459

                  ....*...
gi 6322674    524 RLPLADDI 531
Cdd:pfam00324 460 KNWKPQLL 467
 
Name Accession Description Interval E-value
AA_permease pfam00324
Amino acid permease;
59-531 2.33e-83

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 269.19  E-value: 2.33e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674     59 GSIVGLGLGLMSpvLGMCTSMAIGLINGGPLTIMLGFLISGVCIWFSSLSLGEIVSKFPmeLHVGSAMLAPEKLKLVCSW 138
Cdd:pfam00324   1 HVQMIALGGVIG--TGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGP--VSGGFYTYASRFLGPSLGF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    139 YTGWLMLIgnwtmsTSITFAGAQLTISLILMTNSNLISEAHLIFYTVIVFYLVVTVVGLVNLKFARFIETInkVCVYWII 218
Cdd:pfam00324  77 ATGWNYWL------SWITVLALELTAASILIQFWELVPDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFW--FALIKII 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    219 YAIIFIDILLLVFHKGK------FRSLKYALFhfDNNLSGYKSafLSFIIGFQQSNFTLQGFSMLPALADEVKVPEKDIP 292
Cdd:pfam00324 149 AIIGFIIVGIILLSGGNpndgaiFRYLGDNGG--KNNFPPGFG--KGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIP 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    293 RGMSNAVLLSAFSGVIFLIPIMLILPDNDLLFTNHKV--LPIVNIFTKSTDSVVLSFFLVLLILGNLLFSGIGSITTSSR 370
Cdd:pfam00324 225 KAILQVIWRITIFYILSLLAIGLLVPWNDPGLLNDSAsaASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    371 AVYSFSRDQAIPyydkwTYVEPDSQSKVPKNSVVLSMIISYFLGLLALISTA-------AFNAFIGAAVLCLCSATFIPL 443
Cdd:pfam00324 305 MLYSLARDGLAP-----KFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAivfnfllAISGLSGLIVWGLISLSHLRF 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    444 VLVLFTRRRAIRSAPVKIRYKFGWFINIVSIVWLLLSMVSVCLPTQVPVTFKTMNYALMVYVFCILVITGLYFKWGKYNF 523
Cdd:pfam00324 380 RKAFKYQGRSIDELPFKAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNWGAGSFAAAYLIVLLFLIILIGVKLHV 459

                  ....*...
gi 6322674    524 RLPLADDI 531
Cdd:pfam00324 460 KNWKPQLL 467
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
42-519 4.27e-72

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 240.03  E-value: 4.27e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674     42 AEHFNYDQVLDKSLlSRGSIVGLGLGLMSPVLGMCTSMAIGLINGGPLTIMLGFLISGVCIWFSSLSLGEIVSKFPME-- 119
Cdd:TIGR00907   1 LVALGYKPELKREF-SLWSIFGFAFSISNSWTGISTTYNYGLSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSgg 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    120 LHVGSAMLAPEKLKLVCSWYTGWLMLIGNWTMSTSITFAGAQLTISLILMTnSNLISEAHLIFYTVIVFYLVVTVVGLVN 199
Cdd:TIGR00907  80 QYFWSAKLAPPRQMPFASWMTGWFNLAGQVAGTASTDLSVAQLILGIVSLT-TPGREYIPTRWHIFGIMIGIHLIHALIN 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    200 LKFARFIETINKVCVYWIIYAIIFIDILLLVFHKGKFRSLKYALFHFDNNLSGYKSAFLSFIIGFQQSNFTLQGFSMLPA 279
Cdd:TIGR00907 159 SLPTKWLPRITSSAAYWSLLGFLTICITLLACKSPKFNDGKFVFTNFNNSTGGWKPGGFAFLLGLLNPAWSMTGYDGTAH 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    280 LADEVKVPEKDIPRGMSNAVLLSAFSGVIFLIPIMLILPDNDLLFTNHKVLPIVNIFTKSTDSVVLSFFLVLLILGNLLF 359
Cdd:TIGR00907 239 MAEEIENPEVVGPRAIIGAVAIGIVTGFCFNIVLFFSMGDIDSLISSTTGQPIAQIFYNALGNKAGAIFLLCLILVTSFF 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    360 SGIGSITTSSRAVYSFSRDQAIPYYDKWTYVEPDSQskVPKNSVVLSMIISYFLGLLALISTAAFNAFIGAAVLCLCSAT 439
Cdd:TIGR00907 319 CAITCMTANSRMIYAFSRDGGLPFSPLWSRVNPRTQ--VPLNAVWLSAVWIILIGLLGLGSSTAFQAIFSVCTVALDVSY 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    440 FIPLVLVLFTRRRAIRSAPVKIRyKFGWFINIVSIVWLLLSMVSVCLPTQVPVTFKTMNYALMVYVFcILVITGLYFKWG 519
Cdd:TIGR00907 397 VIPIICKLAKGRNTIAPGPFWLG-KYGFFVNAVAVAWTVFSSVLFSFPPVLPVTPENMNYAVVVFAG-VLAISLVYWKYK 474
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
56-520 8.44e-25

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 107.68  E-value: 8.44e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674   56 LSRGSIVGLGLGLMSPvLGMCTSMAIGLINGGPLTImLGFLISGVCIWFSSLSLGEIVSKFPmelHVGSAMLAPEK-LKL 134
Cdd:COG0531  13 LGLFDLVALGVGAIIG-AGIFVLPGLAAGLAGPAAI-LAWLIAGLLALLVALSYAELASAFP---RAGGAYTYARRaLGP 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  135 VCSWYTGWLMLIGNWTMSTSITFAGAQLTISLILMTNSNLISeahlifytvIVFYLVVTvvgLVNLKFARFIETINKVCV 214
Cdd:COG0531  88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIA---------LVLILLLT---LLNLRGVKESAKVNNILT 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  215 YWIIYAIIFIDILLLVFHKGKfrslkyALFHFDNNLSGYKSAFLSFIIGFqqsnFTLQGFSMLPALADEVKVPEKDIPRG 294
Cdd:COG0531 156 VLKLLVLLLFIVVGLFAFDPA------NFTPFLPAGGGLSGVLAALALAF----FAFTGFEAIANLAEEAKNPKRNIPRA 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  295 MSNAVLLSAFSGVIFLIPIMLILPDNDLLFTNhkvLPIVNIFTKSTDSVVLSFFlVLLILGNLLFSGIGSITTSSRAVYS 374
Cdd:COG0531 226 IILSLLIVGVLYILVSLALTGVVPYDELAASG---APLADAAEAVFGPWGAILI-ALGALLSLLGALNASILGASRLLYA 301
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  375 FSRDQAIPyyDKWTYVEPdsQSKVPKNSVVLSMIISyflGLLALISTAAFNAFIGAAVLC-LCSATFIPLVLVLFTRRRA 453
Cdd:COG0531 302 MARDGLLP--KVFAKVHP--RFGTPVNAILLTGVIA---LLLLLLGAASFTALASLASVGvLLAYLLVALAVIVLRRRRP 374
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6322674  454 IRSAPVKIRykfGWFINIVSIVWLLLSMVSvclptqvpvtfkTMNYALMVYVFCILVITGLYFKWGK 520
Cdd:COG0531 375 DLPRPFRVP---LPLIPILGILLCLFLLYL------------LGPGALLIGLVLLAIGLLLYLLYRR 426
 
Name Accession Description Interval E-value
AA_permease pfam00324
Amino acid permease;
59-531 2.33e-83

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 269.19  E-value: 2.33e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674     59 GSIVGLGLGLMSpvLGMCTSMAIGLINGGPLTIMLGFLISGVCIWFSSLSLGEIVSKFPmeLHVGSAMLAPEKLKLVCSW 138
Cdd:pfam00324   1 HVQMIALGGVIG--TGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGP--VSGGFYTYASRFLGPSLGF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    139 YTGWLMLIgnwtmsTSITFAGAQLTISLILMTNSNLISEAHLIFYTVIVFYLVVTVVGLVNLKFARFIETInkVCVYWII 218
Cdd:pfam00324  77 ATGWNYWL------SWITVLALELTAASILIQFWELVPDIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFW--FALIKII 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    219 YAIIFIDILLLVFHKGK------FRSLKYALFhfDNNLSGYKSafLSFIIGFQQSNFTLQGFSMLPALADEVKVPEKDIP 292
Cdd:pfam00324 149 AIIGFIIVGIILLSGGNpndgaiFRYLGDNGG--KNNFPPGFG--KGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIP 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    293 RGMSNAVLLSAFSGVIFLIPIMLILPDNDLLFTNHKV--LPIVNIFTKSTDSVVLSFFLVLLILGNLLFSGIGSITTSSR 370
Cdd:pfam00324 225 KAILQVIWRITIFYILSLLAIGLLVPWNDPGLLNDSAsaASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    371 AVYSFSRDQAIPyydkwTYVEPDSQSKVPKNSVVLSMIISYFLGLLALISTA-------AFNAFIGAAVLCLCSATFIPL 443
Cdd:pfam00324 305 MLYSLARDGLAP-----KFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAivfnfllAISGLSGLIVWGLISLSHLRF 379
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    444 VLVLFTRRRAIRSAPVKIRYKFGWFINIVSIVWLLLSMVSVCLPTQVPVTFKTMNYALMVYVFCILVITGLYFKWGKYNF 523
Cdd:pfam00324 380 RKAFKYQGRSIDELPFKAPLGPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNWGAGSFAAAYLIVLLFLIILIGVKLHV 459

                  ....*...
gi 6322674    524 RLPLADDI 531
Cdd:pfam00324 460 KNWKPQLL 467
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
42-519 4.27e-72

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 240.03  E-value: 4.27e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674     42 AEHFNYDQVLDKSLlSRGSIVGLGLGLMSPVLGMCTSMAIGLINGGPLTIMLGFLISGVCIWFSSLSLGEIVSKFPME-- 119
Cdd:TIGR00907   1 LVALGYKPELKREF-SLWSIFGFAFSISNSWTGISTTYNYGLSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSgg 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    120 LHVGSAMLAPEKLKLVCSWYTGWLMLIGNWTMSTSITFAGAQLTISLILMTnSNLISEAHLIFYTVIVFYLVVTVVGLVN 199
Cdd:TIGR00907  80 QYFWSAKLAPPRQMPFASWMTGWFNLAGQVAGTASTDLSVAQLILGIVSLT-TPGREYIPTRWHIFGIMIGIHLIHALIN 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    200 LKFARFIETINKVCVYWIIYAIIFIDILLLVFHKGKFRSLKYALFHFDNNLSGYKSAFLSFIIGFQQSNFTLQGFSMLPA 279
Cdd:TIGR00907 159 SLPTKWLPRITSSAAYWSLLGFLTICITLLACKSPKFNDGKFVFTNFNNSTGGWKPGGFAFLLGLLNPAWSMTGYDGTAH 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    280 LADEVKVPEKDIPRGMSNAVLLSAFSGVIFLIPIMLILPDNDLLFTNHKVLPIVNIFTKSTDSVVLSFFLVLLILGNLLF 359
Cdd:TIGR00907 239 MAEEIENPEVVGPRAIIGAVAIGIVTGFCFNIVLFFSMGDIDSLISSTTGQPIAQIFYNALGNKAGAIFLLCLILVTSFF 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    360 SGIGSITTSSRAVYSFSRDQAIPYYDKWTYVEPDSQskVPKNSVVLSMIISYFLGLLALISTAAFNAFIGAAVLCLCSAT 439
Cdd:TIGR00907 319 CAITCMTANSRMIYAFSRDGGLPFSPLWSRVNPRTQ--VPLNAVWLSAVWIILIGLLGLGSSTAFQAIFSVCTVALDVSY 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    440 FIPLVLVLFTRRRAIRSAPVKIRyKFGWFINIVSIVWLLLSMVSVCLPTQVPVTFKTMNYALMVYVFcILVITGLYFKWG 519
Cdd:TIGR00907 397 VIPIICKLAKGRNTIAPGPFWLG-KYGFFVNAVAVAWTVFSSVLFSFPPVLPVTPENMNYAVVVFAG-VLAISLVYWKYK 474
AA_permease_2 pfam13520
Amino acid permease;
85-507 1.61e-27

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 115.49  E-value: 1.61e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674     85 NGGPLTIMLGFLISGVCIWFSSLSLGEIVSKFPME--LHVGSAMLAPEKLKLVCSWYTgwlmLIGNWTMSTSITFAGAQl 162
Cdd:pfam13520  27 SGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSggIYVYLENAFGKFVAFLAGWSN----WFAYVLGLASSASVAAS- 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    163 tiSLILMTNSNLISEAhliFYTVIVFYLVVTVVGLVNLKFARFIETINKVCVyWIIYAIIFIDILLLVFHKGKFRSLKYA 242
Cdd:pfam13520 102 --YLLSALGPDLVPTT---WLTYGIAIAILIIFAIINIRGVRESAKIQNILG-ILKLLLPLILIIILGLVTADGGGFNLL 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    243 LFHFDNNLSgykSAFLSFIIGFQQSNFTLQGFSMLPALADEVKvpEKDIPRGMSNAVLLSAFSGVIFLIPIMLILPDNDL 322
Cdd:pfam13520 176 SGEWHTFFP---DGWPGVFAGFLGVLWSFTGFESAANVSEEVK--KRNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEI 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    323 LFTNhKVLPIVNIFTKSTDSVVLSFFLVLLILGNLLFSGIGSITTSSRAVYSFSRDQAIPYYDKWTYVepdSQSKVPKNS 402
Cdd:pfam13520 251 ALSS-GLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFAKV---NKFGSPIRA 326
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    403 VVLSMIISYFLGLLALISTAAFNAFIGAAVLCLCSATFIPLVLVLFTRRRAirsaPVKIRYKFGWFINIVSIVWLLLSMV 482
Cdd:pfam13520 327 IILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKR----PDLGRIPGRWPVAIFGILFSLFLIV 402
                         410       420
                  ....*....|....*....|....*
gi 6322674    483 SVCLPTQVPVTFKTMNYALMVYVFC 507
Cdd:pfam13520 403 ALFFPPVGPATGSSLNYAIILIVAF 427
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
56-520 8.44e-25

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 107.68  E-value: 8.44e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674   56 LSRGSIVGLGLGLMSPvLGMCTSMAIGLINGGPLTImLGFLISGVCIWFSSLSLGEIVSKFPmelHVGSAMLAPEK-LKL 134
Cdd:COG0531  13 LGLFDLVALGVGAIIG-AGIFVLPGLAAGLAGPAAI-LAWLIAGLLALLVALSYAELASAFP---RAGGAYTYARRaLGP 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  135 VCSWYTGWLMLIGNWTMSTSITFAGAQLTISLILMTNSNLISeahlifytvIVFYLVVTvvgLVNLKFARFIETINKVCV 214
Cdd:COG0531  88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIA---------LVLILLLT---LLNLRGVKESAKVNNILT 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  215 YWIIYAIIFIDILLLVFHKGKfrslkyALFHFDNNLSGYKSAFLSFIIGFqqsnFTLQGFSMLPALADEVKVPEKDIPRG 294
Cdd:COG0531 156 VLKLLVLLLFIVVGLFAFDPA------NFTPFLPAGGGLSGVLAALALAF----FAFTGFEAIANLAEEAKNPKRNIPRA 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  295 MSNAVLLSAFSGVIFLIPIMLILPDNDLLFTNhkvLPIVNIFTKSTDSVVLSFFlVLLILGNLLFSGIGSITTSSRAVYS 374
Cdd:COG0531 226 IILSLLIVGVLYILVSLALTGVVPYDELAASG---APLADAAEAVFGPWGAILI-ALGALLSLLGALNASILGASRLLYA 301
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674  375 FSRDQAIPyyDKWTYVEPdsQSKVPKNSVVLSMIISyflGLLALISTAAFNAFIGAAVLC-LCSATFIPLVLVLFTRRRA 453
Cdd:COG0531 302 MARDGLLP--KVFAKVHP--RFGTPVNAILLTGVIA---LLLLLLGAASFTALASLASVGvLLAYLLVALAVIVLRRRRP 374
                       410       420       430       440       450       460
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 6322674  454 IRSAPVKIRykfGWFINIVSIVWLLLSMVSvclptqvpvtfkTMNYALMVYVFCILVITGLYFKWGK 520
Cdd:COG0531 375 DLPRPFRVP---LPLIPILGILLCLFLLYL------------LGPGALLIGLVLLAIGLLLYLLYRR 426
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
83-427 9.61e-05

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 45.35  E-value: 9.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674     83 LINGGPLTIMLGFLISGVCIWFSSLSLGEIVSKFPMeLHVGSAMLAPEKLKLVCSWYTGWLMLIgNWTMSTSITFAGAQL 162
Cdd:TIGR00913  30 LATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPV-VSGSFATYASRFVDPAFGFAVGWNYWL-QWLIVLPLELVTASM 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    163 TISlilmtnsnliseahliFYT--------VIVFYLVVTVVGLVNLKF---ARFIETINKVCVywiiyaIIFIDILLLVF 231
Cdd:TIGR00913 108 TIQ----------------YWTdkvnpavwIAIFYVFIVIINLFGVKGygeAEFWFSSIKILA------IIGFIILSIIL 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    232 HKGKFRSLKYALFHFDNN---LSGYKSA--FLSFIIGFQQSNFTLQGFSMLPALADEVKVPEKDIPRGMSNAVLLSAFSG 306
Cdd:TIGR00913 166 NCGGGPNHGYIGFRYWHDpgaFAGGTIGgrFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFY 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6322674    307 VIFLIPIMLILPDND--LLFTNHKVL----PIVnIFTKSTDSVVLSFFLVLLILGNLLFSGIGSITTSSRAVYSFSRDQA 380
Cdd:TIGR00913 246 ILTLFLIGFLVPYNDprLLSSSSSSDsaasPFV-IAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGL 324
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 6322674    381 IP----YYDKWtyvepdsqsKVPknsvVLSMIISYFLGLLALI--STAAFNAF 427
Cdd:TIGR00913 325 APkifaYVDRR---------GVP----YVAVIVSSLFGLLAFLavSKKEAEVF 364
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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