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Conserved domains on  [gi|6323076|ref|NP_013148|]
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putative ferric-chelate reductase [Saccharomyces cerevisiae S288C]

Protein Classification

ferric reductase family protein( domain architecture ID 10484952)

ferric reductase family protein functions as an oxidoreductase, such as human NADPH oxidase 1, a voltage-gated proton channel that mediates the H(+) currents of resting phagocytes and other tissues

EC:  1.-.-.-
Gene Ontology:  GO:0050661|GO:0016491|GO:0016020

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
Ferric_reduct pfam01794
Ferric reductase like transmembrane component; This family includes a common region in the ...
120-233 1.86e-26

Ferric reductase like transmembrane component; This family includes a common region in the transmembrane proteins mammalian cytochrome B-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from mouse-ear cress. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane. The Frp1 protein from S. pombe is a ferric reductase component and is required for cell surface ferric reductase activity, mutants in frp1 are deficient in ferric iron uptake. Cytochrome B-245 heavy chain is a FAD-dependent dehydrogenase it is also has electron transferase activity which reduces molecular oxygen to superoxide anion, a precursor in the production of microbicidal oxidants. Mutations in the sequence of cytochrome B-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterized by the absence of a functional plasma membrane associated NADPH oxidase. The chronic granulomatous disease gene codes for the beta chain of cytochrome B-245 and cytochrome B-245 is missing from patients with the disease.


:

Pssm-ID: 426438 [Multi-domain]  Cd Length: 121  Bit Score: 104.27  E-value: 1.86e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076    120 GRISVALMPPLLFLTLRPSPLPHTL---YLALLPLHKWISRIVVLESILHTWFYLYYMYI---NDTLYVKMRKLPNIYGV 193
Cdd:pfam01794   2 GILALALLPLLLLLALRNNPLEWLTglsYDRLLLFHRWLGRLAFLLALLHVILYLIYWLRfslEGILDLLLKRPYNILGI 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 6323076    194 IALGLFLLIAITSVRYARRWSYRVFYYVHYVSTWLILVFL 233
Cdd:pfam01794  82 IALVLLVLLAITSLPPFRRLSYELFLYLHILLAVAFLLLV 121
NOX_Duox_like_FAD_NADP cd06186
NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as ...
265-459 2.94e-18

NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2, electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation.


:

Pssm-ID: 99783 [Multi-domain]  Cd Length: 210  Bit Score: 83.89  E-value: 2.94e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  265 VTRVTIVPISSsLSLLEFPLTdlPKKPILPGGHLRINIYHrnfLRRFFShlipfQHPFTIASIPSD--NLVRLIIRNGHF 342
Cdd:cd06186   1 IATVELLPDSD-VIRLTIPKP--KPFKWKPGQHVYLNFPS---LLSFWQ-----SHPFTIASSPEDeqDTLSLIIRAKKG 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  343 PlrTNEKYYITGAFEPelsfiSKPTVPFNITtksskNPFRnnssalinSPLNFLIKAQRVFMCVGGSGISFGLPLLRILN 422
Cdd:cd06186  70 F--TTRLLRKALKSPG-----GGVSLKVLVE-----GPYG--------SSSEDLLSYDNVLLVAGGSGITFVLPILRDLL 129
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6323076  423 FN------GVNVRLLWVSRDYKDLE----VLNHFKN--NFEGMEIYISG 459
Cdd:cd06186 130 RRssktsrTRRVKLVWVVRDREDLEwfldELRAAQEleVDGEIEIYVTR 178
 
Name Accession Description Interval E-value
Ferric_reduct pfam01794
Ferric reductase like transmembrane component; This family includes a common region in the ...
120-233 1.86e-26

Ferric reductase like transmembrane component; This family includes a common region in the transmembrane proteins mammalian cytochrome B-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from mouse-ear cress. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane. The Frp1 protein from S. pombe is a ferric reductase component and is required for cell surface ferric reductase activity, mutants in frp1 are deficient in ferric iron uptake. Cytochrome B-245 heavy chain is a FAD-dependent dehydrogenase it is also has electron transferase activity which reduces molecular oxygen to superoxide anion, a precursor in the production of microbicidal oxidants. Mutations in the sequence of cytochrome B-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterized by the absence of a functional plasma membrane associated NADPH oxidase. The chronic granulomatous disease gene codes for the beta chain of cytochrome B-245 and cytochrome B-245 is missing from patients with the disease.


Pssm-ID: 426438 [Multi-domain]  Cd Length: 121  Bit Score: 104.27  E-value: 1.86e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076    120 GRISVALMPPLLFLTLRPSPLPHTL---YLALLPLHKWISRIVVLESILHTWFYLYYMYI---NDTLYVKMRKLPNIYGV 193
Cdd:pfam01794   2 GILALALLPLLLLLALRNNPLEWLTglsYDRLLLFHRWLGRLAFLLALLHVILYLIYWLRfslEGILDLLLKRPYNILGI 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 6323076    194 IALGLFLLIAITSVRYARRWSYRVFYYVHYVSTWLILVFL 233
Cdd:pfam01794  82 IALVLLVLLAITSLPPFRRLSYELFLYLHILLAVAFLLLV 121
NOX_Duox_like_FAD_NADP cd06186
NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as ...
265-459 2.94e-18

NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2, electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation.


Pssm-ID: 99783 [Multi-domain]  Cd Length: 210  Bit Score: 83.89  E-value: 2.94e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  265 VTRVTIVPISSsLSLLEFPLTdlPKKPILPGGHLRINIYHrnfLRRFFShlipfQHPFTIASIPSD--NLVRLIIRNGHF 342
Cdd:cd06186   1 IATVELLPDSD-VIRLTIPKP--KPFKWKPGQHVYLNFPS---LLSFWQ-----SHPFTIASSPEDeqDTLSLIIRAKKG 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  343 PlrTNEKYYITGAFEPelsfiSKPTVPFNITtksskNPFRnnssalinSPLNFLIKAQRVFMCVGGSGISFGLPLLRILN 422
Cdd:cd06186  70 F--TTRLLRKALKSPG-----GGVSLKVLVE-----GPYG--------SSSEDLLSYDNVLLVAGGSGITFVLPILRDLL 129
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6323076  423 FN------GVNVRLLWVSRDYKDLE----VLNHFKN--NFEGMEIYISG 459
Cdd:cd06186 130 RRssktsrTRRVKLVWVVRDREDLEwfldELRAAQEleVDGEIEIYVTR 178
COG4097 COG4097
Predicted ferric reductase [Inorganic ion transport and metabolism];
120-339 7.07e-11

Predicted ferric reductase [Inorganic ion transport and metabolism];


Pssm-ID: 443273 [Multi-domain]  Cd Length: 442  Bit Score: 64.91  E-value: 7.07e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  120 GRISVALMPPLLFLTLRPSPLPHTL------YLallpLHKWISRIVVLESILHTWFYL--YYMYINDTLYVKMRKLPNIY 191
Cdd:COG4097  47 GLLALALMSLQFLLAARPPWLERPFggldrlYR----LHKWLGILALVLALAHPLLLLgpKWLVGWGGLPARLAALLTLL 122
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  192 -------GVIALGLFLLIAITSVrYARRWSYRVFYYVHYVS--TWLILVFLH------YHARPGISYYTTLNVLILTGQI 256
Cdd:COG4097 123 rglaellGEWAFYLLLALVVLSL-LRRRLPYELWRLTHRLLavAYLLLAFHHlllggpFYWSPPAGVLWAALAAAGLAAA 201
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  257 VYRLHITNVT------RVT-IVPISSSLSLLEFPLTDLPKKPILPGGHLRINIYHRNFLRRffshlipfQHPFTIASIP- 328
Cdd:COG4097 202 VYSRLGRPLRsrrhpyRVEsVEPEAGDVVELTLRPEGGRWLGHRAGQFAFLRFDGSPFWEE--------AHPFSISSAPg 273
                       250
                ....*....|.
gi 6323076  329 SDNLVRLIIRN 339
Cdd:COG4097 274 GDGRLRFTIKA 284
FAD_binding_8 pfam08022
FAD-binding domain;
289-338 1.70e-05

FAD-binding domain;


Pssm-ID: 285293 [Multi-domain]  Cd Length: 108  Bit Score: 44.25  E-value: 1.70e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 6323076    289 KKPIL-----PGGHLRINIYHRnflrrffshLIPFQ-HPFTIASIPSDNLVRLIIR 338
Cdd:pfam08022  22 SKPKKpfkykPGQYMFINFLPP---------LSFLQsHPFTITSAPSDDKLSLHIK 68
PLN02844 PLN02844
oxidoreductase/ferric-chelate reductase
113-444 6.46e-05

oxidoreductase/ferric-chelate reductase


Pssm-ID: 215453 [Multi-domain]  Cd Length: 722  Bit Score: 46.38  E-value: 6.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   113 LEITKRMGRISVALMPPLLFLTLRPSPLPHTL---YLALLPLHKWISRIVVLESILHTWFYLYYMYINDTLYVKMRKLPN 189
Cdd:PLN02844 153 LRVATRFGLLAEACLALLLLPVLRGLALFRLLgiqFEASVRYHVWLGTSMIFFATVHGASTLFIWGISHHIQDEIWKWQK 232
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   190 ---IY--GVIALGLFLLIAITSVRYARRWSYRVFYYVHYVSTWLILVFLhYHARPGISYYTTLNVLILTGQIVYRLhitn 264
Cdd:PLN02844 233 tgrIYlaGEIALVTGLVIWITSLPQIRRKRFEIFYYTHHLYIVFLIFFL-FHAGDRHFYMVFPGIFLFGLDKLLRI---- 307
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   265 vtrVTIVPISSSLSLLEFP-----LTdLPKKPILpgghlriniyhrNFLRRFFSHL-IP----FQ-HPFTIASIPS--DN 331
Cdd:PLN02844 308 ---VQSRPETCILSARLFPckaieLV-LPKDPGL------------KYAPTSVIFMkIPsisrFQwHPFSITSSSNidDH 371
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   332 LVRLIIR-NGHFplrTNEKY-YITGAFEPELSFISkptvpfNITTkSSKNPFRNNSsalinspLNFLiKAQRVFMCVGGS 409
Cdd:PLN02844 372 TMSVIIKcEGGW---TNSLYnKIQAELDSETNQMN------CIPV-AIEGPYGPAS-------VDFL-RYDSLLLVAGGI 433
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 6323076   410 GISFGLPLLRILNFNGVN-------VRLLWVSRDYKDLEVLN 444
Cdd:PLN02844 434 GITPFLSILKEIASQSSSryrfpkrVQLIYVVKKSQDICLLN 475
 
Name Accession Description Interval E-value
Ferric_reduct pfam01794
Ferric reductase like transmembrane component; This family includes a common region in the ...
120-233 1.86e-26

Ferric reductase like transmembrane component; This family includes a common region in the transmembrane proteins mammalian cytochrome B-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from mouse-ear cress. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane. The Frp1 protein from S. pombe is a ferric reductase component and is required for cell surface ferric reductase activity, mutants in frp1 are deficient in ferric iron uptake. Cytochrome B-245 heavy chain is a FAD-dependent dehydrogenase it is also has electron transferase activity which reduces molecular oxygen to superoxide anion, a precursor in the production of microbicidal oxidants. Mutations in the sequence of cytochrome B-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterized by the absence of a functional plasma membrane associated NADPH oxidase. The chronic granulomatous disease gene codes for the beta chain of cytochrome B-245 and cytochrome B-245 is missing from patients with the disease.


Pssm-ID: 426438 [Multi-domain]  Cd Length: 121  Bit Score: 104.27  E-value: 1.86e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076    120 GRISVALMPPLLFLTLRPSPLPHTL---YLALLPLHKWISRIVVLESILHTWFYLYYMYI---NDTLYVKMRKLPNIYGV 193
Cdd:pfam01794   2 GILALALLPLLLLLALRNNPLEWLTglsYDRLLLFHRWLGRLAFLLALLHVILYLIYWLRfslEGILDLLLKRPYNILGI 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 6323076    194 IALGLFLLIAITSVRYARRWSYRVFYYVHYVSTWLILVFL 233
Cdd:pfam01794  82 IALVLLVLLAITSLPPFRRLSYELFLYLHILLAVAFLLLV 121
NOX_Duox_like_FAD_NADP cd06186
NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as ...
265-459 2.94e-18

NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2, electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation.


Pssm-ID: 99783 [Multi-domain]  Cd Length: 210  Bit Score: 83.89  E-value: 2.94e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  265 VTRVTIVPISSsLSLLEFPLTdlPKKPILPGGHLRINIYHrnfLRRFFShlipfQHPFTIASIPSD--NLVRLIIRNGHF 342
Cdd:cd06186   1 IATVELLPDSD-VIRLTIPKP--KPFKWKPGQHVYLNFPS---LLSFWQ-----SHPFTIASSPEDeqDTLSLIIRAKKG 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  343 PlrTNEKYYITGAFEPelsfiSKPTVPFNITtksskNPFRnnssalinSPLNFLIKAQRVFMCVGGSGISFGLPLLRILN 422
Cdd:cd06186  70 F--TTRLLRKALKSPG-----GGVSLKVLVE-----GPYG--------SSSEDLLSYDNVLLVAGGSGITFVLPILRDLL 129
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6323076  423 FN------GVNVRLLWVSRDYKDLE----VLNHFKN--NFEGMEIYISG 459
Cdd:cd06186 130 RRssktsrTRRVKLVWVVRDREDLEwfldELRAAQEleVDGEIEIYVTR 178
COG4097 COG4097
Predicted ferric reductase [Inorganic ion transport and metabolism];
120-339 7.07e-11

Predicted ferric reductase [Inorganic ion transport and metabolism];


Pssm-ID: 443273 [Multi-domain]  Cd Length: 442  Bit Score: 64.91  E-value: 7.07e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  120 GRISVALMPPLLFLTLRPSPLPHTL------YLallpLHKWISRIVVLESILHTWFYL--YYMYINDTLYVKMRKLPNIY 191
Cdd:COG4097  47 GLLALALMSLQFLLAARPPWLERPFggldrlYR----LHKWLGILALVLALAHPLLLLgpKWLVGWGGLPARLAALLTLL 122
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  192 -------GVIALGLFLLIAITSVrYARRWSYRVFYYVHYVS--TWLILVFLH------YHARPGISYYTTLNVLILTGQI 256
Cdd:COG4097 123 rglaellGEWAFYLLLALVVLSL-LRRRLPYELWRLTHRLLavAYLLLAFHHlllggpFYWSPPAGVLWAALAAAGLAAA 201
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076  257 VYRLHITNVT------RVT-IVPISSSLSLLEFPLTDLPKKPILPGGHLRINIYHRNFLRRffshlipfQHPFTIASIP- 328
Cdd:COG4097 202 VYSRLGRPLRsrrhpyRVEsVEPEAGDVVELTLRPEGGRWLGHRAGQFAFLRFDGSPFWEE--------AHPFSISSAPg 273
                       250
                ....*....|.
gi 6323076  329 SDNLVRLIIRN 339
Cdd:COG4097 274 GDGRLRFTIKA 284
FAD_binding_8 pfam08022
FAD-binding domain;
289-338 1.70e-05

FAD-binding domain;


Pssm-ID: 285293 [Multi-domain]  Cd Length: 108  Bit Score: 44.25  E-value: 1.70e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 6323076    289 KKPIL-----PGGHLRINIYHRnflrrffshLIPFQ-HPFTIASIPSDNLVRLIIR 338
Cdd:pfam08022  22 SKPKKpfkykPGQYMFINFLPP---------LSFLQsHPFTITSAPSDDKLSLHIK 68
PLN02844 PLN02844
oxidoreductase/ferric-chelate reductase
113-444 6.46e-05

oxidoreductase/ferric-chelate reductase


Pssm-ID: 215453 [Multi-domain]  Cd Length: 722  Bit Score: 46.38  E-value: 6.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   113 LEITKRMGRISVALMPPLLFLTLRPSPLPHTL---YLALLPLHKWISRIVVLESILHTWFYLYYMYINDTLYVKMRKLPN 189
Cdd:PLN02844 153 LRVATRFGLLAEACLALLLLPVLRGLALFRLLgiqFEASVRYHVWLGTSMIFFATVHGASTLFIWGISHHIQDEIWKWQK 232
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   190 ---IY--GVIALGLFLLIAITSVRYARRWSYRVFYYVHYVSTWLILVFLhYHARPGISYYTTLNVLILTGQIVYRLhitn 264
Cdd:PLN02844 233 tgrIYlaGEIALVTGLVIWITSLPQIRRKRFEIFYYTHHLYIVFLIFFL-FHAGDRHFYMVFPGIFLFGLDKLLRI---- 307
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   265 vtrVTIVPISSSLSLLEFP-----LTdLPKKPILpgghlriniyhrNFLRRFFSHL-IP----FQ-HPFTIASIPS--DN 331
Cdd:PLN02844 308 ---VQSRPETCILSARLFPckaieLV-LPKDPGL------------KYAPTSVIFMkIPsisrFQwHPFSITSSSNidDH 371
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323076   332 LVRLIIR-NGHFplrTNEKY-YITGAFEPELSFISkptvpfNITTkSSKNPFRNNSsalinspLNFLiKAQRVFMCVGGS 409
Cdd:PLN02844 372 TMSVIIKcEGGW---TNSLYnKIQAELDSETNQMN------CIPV-AIEGPYGPAS-------VDFL-RYDSLLLVAGGI 433
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 6323076   410 GISFGLPLLRILNFNGVN-------VRLLWVSRDYKDLEVLN 444
Cdd:PLN02844 434 GITPFLSILKEIASQSSSryrfpkrVQLIYVVKKSQDICLLN 475
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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