NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|6323292|ref|NP_013364|]
View 

Tma7p [Saccharomyces cerevisiae S288C]

Protein Classification

translation machinery-associated protein 7( domain architecture ID 10557399)

translation machinery-associated protein 7 (TMA7) may be involved in protein synthesis

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
TMA7 pfam09072
Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of ...
 3-59 3.96e-04

Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of the TMA7 gene results in altered protein synthesis rates.


:

Pssm-ID: 462671  Cd Length: 62  Bit Score: 34.17  E-value: 3.96e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 6323292     3 SRQGGKMKPLKQKKKQQQDLDPEDIAFKEKQKADAAAKKALMANMKSGKPLVGGGIK 59
Cdd:pfam09072  1 GRQGGKKKPLKAPKKQAKELDEDDLAFKQKQKEEAKALKELKAKAKGKGPLGGGGIK 57
 
Name Accession Description Interval E-value
TMA7 pfam09072
Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of ...
 3-59 3.96e-04

Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of the TMA7 gene results in altered protein synthesis rates.


Pssm-ID: 462671  Cd Length: 62  Bit Score: 34.17  E-value: 3.96e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 6323292     3 SRQGGKMKPLKQKKKQQQDLDPEDIAFKEKQKADAAAKKALMANMKSGKPLVGGGIK 59
Cdd:pfam09072  1 GRQGGKKKPLKAPKKQAKELDEDDLAFKQKQKEEAKALKELKAKAKGKGPLGGGGIK 57
 
Name Accession Description Interval E-value
TMA7 pfam09072
Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of ...
 3-59 3.96e-04

Translation machinery associated TMA7; TMA7 plays a role in protein translation. Deletions of the TMA7 gene results in altered protein synthesis rates.


Pssm-ID: 462671  Cd Length: 62  Bit Score: 34.17  E-value: 3.96e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 6323292     3 SRQGGKMKPLKQKKKQQQDLDPEDIAFKEKQKADAAAKKALMANMKSGKPLVGGGIK 59
Cdd:pfam09072  1 GRQGGKKKPLKAPKKQAKELDEDDLAFKQKQKEEAKALKELKAKAKGKGPLGGGGIK 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH