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Conserved domains on  [gi|6323314|ref|NP_013386|]
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dodecenoyl-CoA isomerase [Saccharomyces cerevisiae S288C]

Protein Classification

enoyl-CoA hydratase/isomerase family protein( domain architecture ID 10158671)

enoyl-CoA hydratase/isomerase family protein similar to enoyl-CoA hydratase, which catalyzes the second step in the beta-oxidation pathway of fatty acid metabolism, the syn-addition of a water molecule across the double bond of a trans-2-enoyl-CoA thioester, resulting in the formation of a beta-hydroxyacyl-CoA thioester

CATH:  1.10.12.10
Gene Ontology:  GO:0003824
PubMed:  18470480|11263873
SCOP:  4000036

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
crotonase-like cd06558
Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse ...
 11-219 1.69e-33

Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.


:

Pssm-ID: 119339 [Multi-domain]  Cd Length: 195  Bit Score: 120.74  E-value: 1.69e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   11 ISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTnkypset 90
Cdd:cd06558   1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGE------- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   91 skWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTTVSLPLKFG 170
Cdd:cd06558  74 --EARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIA-AEDAKFGLPEVKLGLVPGGGGTQRLPRLVG 150

                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6323314  171 TNTTYECLMFNKPFKYDIMCENGFISKNFnmpssNAEAFNAKVLEELRE 219
Cdd:cd06558 151 PARARELLLTGRRISAEEALELGLVDEVV-----PDEELLAAALELARR 194
 
Name Accession Description Interval E-value
crotonase-like cd06558
Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse ...
 11-219 1.69e-33

Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.


Pssm-ID: 119339 [Multi-domain]  Cd Length: 195  Bit Score: 120.74  E-value: 1.69e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   11 ISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTnkypset 90
Cdd:cd06558   1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGE------- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   91 skWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTTVSLPLKFG 170
Cdd:cd06558  74 --EARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIA-AEDAKFGLPEVKLGLVPGGGGTQRLPRLVG 150

                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6323314  171 TNTTYECLMFNKPFKYDIMCENGFISKNFnmpssNAEAFNAKVLEELRE 219
Cdd:cd06558 151 PARARELLLTGRRISAEEALELGLVDEVV-----PDEELLAAALELARR 194
CaiD COG1024
Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Enoyl-CoA hydratase ...
 11-184 6.64e-23

Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Enoyl-CoA hydratase/carnithine racemase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440647 [Multi-domain]  Cd Length: 249  Bit Score: 94.08  E-value: 6.64e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   11 ISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKypset 90
Cdd:COG1024   1 VLVEREGGVATITLNRPEKLNALSLEMLAELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAAAADPEEAR----- 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   91 skwvsNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTTVSLPLKFG 170
Cdd:COG1024  76 -----AFARGLQRLFRALRRLPKPVIAAVNGAALGGGLELALACDLRIA-AEDARFGLPEVRLGLIPGGGGTQRLPRLVG 149

                       170
                ....*....|....
gi 6323314  171 TNTTYECLMFNKPF 184
Cdd:COG1024 150 LARAKELLLTGRRI 163
PRK06688 PRK06688
enoyl-CoA hydratase; Provisional
 8-256 2.80e-18

enoyl-CoA hydratase; Provisional


Pssm-ID: 235852 [Multi-domain]  Cd Length: 259  Bit Score: 81.84  E-value: 2.80e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     8 NEKISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDdtnkyP 87
Cdd:PRK06688   4 VTDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPK-----P 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    88 SETSKWVSNFVARnvyVTDAfikhSKVLICCLNGPA--IGLSAALValCDIVYsINDKVYLLYPFANLGLITEGGTTVSL 165
Cdd:PRK06688  79 PDELAPVNRFLRA---IAAL----PKPVVAAVNGPAvgVGVSLALA--CDLVY-ASESAKFSLPFAKLGLCPDAGGSALL 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   166 PLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFnmPSSNAEAFNAKVLEELREKVkglyLPSCLGMKKLLksnhidafN 245
Cdd:PRK06688 149 PRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVV--PAAELDAEADAQAAKLAAGP----ASALRYTKRAI--------N 214

                        250
                 ....*....|.
gi 6323314   246 KANSVEVNESL 256
Cdd:PRK06688 215 AATLTELEEAL 225
ECH_1 pfam00378
Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: ...
 22-184 2.16e-10

Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase.


Pssm-ID: 395302 [Multi-domain]  Cd Length: 251  Bit Score: 59.68  E-value: 2.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     22 IHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIA-KAQGDDTNKYPSETSKWvsnfvaR 100
Cdd:pfam00378   9 ITLNRPEAVNALSAELITELIQALEKLRTDPSVRAVVLTGGDKAFCAGADLKEMYgEGPAHQALYRENVLDLW------T 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    101 NVYVTDafikhsKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLyPFANLGLITEGGTTVSLPLKFGTNTTYECLMF 180
Cdd:pfam00378  83 LLYTCP------KPVIAAVNGYAIGGGCELALACDIIIAADNASFGL-NETKLGIIPGAGGTDRLPRIIGHSKAMEMLLL 155


                  ....
gi 6323314    181 NKPF 184
Cdd:pfam00378 156 GRRI 159
 
Name Accession Description Interval E-value
crotonase-like cd06558
Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse ...
 11-219 1.69e-33

Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.


Pssm-ID: 119339 [Multi-domain]  Cd Length: 195  Bit Score: 120.74  E-value: 1.69e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   11 ISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTnkypset 90
Cdd:cd06558   1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGE------- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   91 skWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTTVSLPLKFG 170
Cdd:cd06558  74 --EARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIA-AEDAKFGLPEVKLGLVPGGGGTQRLPRLVG 150

                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 6323314  171 TNTTYECLMFNKPFKYDIMCENGFISKNFnmpssNAEAFNAKVLEELRE 219
Cdd:cd06558 151 PARARELLLTGRRISAEEALELGLVDEVV-----PDEELLAAALELARR 194
CaiD COG1024
Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Enoyl-CoA hydratase ...
 11-184 6.64e-23

Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]; Enoyl-CoA hydratase/carnithine racemase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440647 [Multi-domain]  Cd Length: 249  Bit Score: 94.08  E-value: 6.64e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   11 ISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKypset 90
Cdd:COG1024   1 VLVEREGGVATITLNRPEKLNALSLEMLAELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAAAADPEEAR----- 75

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   91 skwvsNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTTVSLPLKFG 170
Cdd:COG1024  76 -----AFARGLQRLFRALRRLPKPVIAAVNGAALGGGLELALACDLRIA-AEDARFGLPEVRLGLIPGGGGTQRLPRLVG 149

                       170
                ....*....|....
gi 6323314  171 TNTTYECLMFNKPF 184
Cdd:COG1024 150 LARAKELLLTGRRI 163
PRK06688 PRK06688
enoyl-CoA hydratase; Provisional
 8-256 2.80e-18

enoyl-CoA hydratase; Provisional


Pssm-ID: 235852 [Multi-domain]  Cd Length: 259  Bit Score: 81.84  E-value: 2.80e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     8 NEKISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDdtnkyP 87
Cdd:PRK06688   4 VTDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPK-----P 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    88 SETSKWVSNFVARnvyVTDAfikhSKVLICCLNGPA--IGLSAALValCDIVYsINDKVYLLYPFANLGLITEGGTTVSL 165
Cdd:PRK06688  79 PDELAPVNRFLRA---IAAL----PKPVVAAVNGPAvgVGVSLALA--CDLVY-ASESAKFSLPFAKLGLCPDAGGSALL 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   166 PLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFnmPSSNAEAFNAKVLEELREKVkglyLPSCLGMKKLLksnhidafN 245
Cdd:PRK06688 149 PRLIGRARAAEMLLLGEPLSAEEALRIGLVNRVV--PAAELDAEADAQAAKLAAGP----ASALRYTKRAI--------N 214

                        250
                 ....*....|.
gi 6323314   246 KANSVEVNESL 256
Cdd:PRK06688 215 AATLTELEEAL 225
PRK05981 PRK05981
enoyl-CoA hydratase/isomerase;
7-166 2.15e-11

enoyl-CoA hydratase/isomerase;


Pssm-ID: 235661  Cd Length: 266  Bit Score: 62.83  E-value: 2.15e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     7 QNEKISYRIEGPFFIIHLMNPDNLNALEGEdyiYLGELLE----LADRNRDVYFTIIQSSGRFFSSGADFKGiAKAQGDD 82
Cdd:PRK05981   2 QFKKVTLDFDGGVAILTLDHPEVMNAVSID---MLGGLAEaldaIEDGKAEVRCLVLTGAGRGFCTGANLQG-RGSGGRE 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    83 TNKYPSETSKWVSNFvarNVYVTdAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTT 162
Cdd:PRK05981  78 SDSGGDAGAALETAY---HPFLR-RLRNLPCPIVTAVNGPAAGVGMSFALMGDLILC-ARSAYFLQAFRRIGLVPDGGST 152


                 ....
gi 6323314   163 VSLP 166
Cdd:PRK05981 153 WLLP 156
ECH_1 pfam00378
Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: ...
 22-184 2.16e-10

Enoyl-CoA hydratase/isomerase; This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase.


Pssm-ID: 395302 [Multi-domain]  Cd Length: 251  Bit Score: 59.68  E-value: 2.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     22 IHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIA-KAQGDDTNKYPSETSKWvsnfvaR 100
Cdd:pfam00378   9 ITLNRPEAVNALSAELITELIQALEKLRTDPSVRAVVLTGGDKAFCAGADLKEMYgEGPAHQALYRENVLDLW------T 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    101 NVYVTDafikhsKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLyPFANLGLITEGGTTVSLPLKFGTNTTYECLMF 180
Cdd:pfam00378  83 LLYTCP------KPVIAAVNGYAIGGGCELALACDIIIAADNASFGL-NETKLGIIPGAGGTDRLPRIIGHSKAMEMLLL 155


                  ....
gi 6323314    181 NKPF 184
Cdd:pfam00378 156 GRRI 159
PRK06495 PRK06495
enoyl-CoA hydratase/isomerase family protein;
46-160 2.16e-09

enoyl-CoA hydratase/isomerase family protein;


Pssm-ID: 168580 [Multi-domain]  Cd Length: 257  Bit Score: 56.63  E-value: 2.16e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    46 ELADRNrDVYFTIIQSSGRFFSSGADFKGIAkaqgdDTNKYPSETskWVSNFVARNVYvtDAFIKHSKVLICCLNGPAIG 125
Cdd:PRK06495  41 EISERP-DVRVVVLTGAGKVFCAGADLKGRP-----DVIKGPGDL--RAHNRRTRECF--HAIRECAKPVIAAVNGPALG 110

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 6323314   126 LSAALVALCDIVYSINDKVYLLyPFANLGLIteGG 160
Cdd:PRK06495 111 AGLGLVASCDIIVASENAVFGL-PEIDVGLA--GG 142
PRK09674 PRK09674
enoyl-CoA hydratase-isomerase; Provisional
 22-165 2.63e-09

enoyl-CoA hydratase-isomerase; Provisional


Pssm-ID: 182026 [Multi-domain]  Cd Length: 255  Bit Score: 56.31  E-value: 2.63e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    22 IHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQ--GDDTNKYPsetSKWVSnfva 99
Cdd:PRK09674  15 LTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEKDlaATLNDPRP---QLWQR---- 87

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6323314   100 rnvyvTDAFikhSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLyPFANLGLITEGGTTVSL 165
Cdd:PRK09674  88 -----LQAF---NKPLIAAVNGYALGAGCELALLCDIVIAGENARFGL-PEITLGIMPGAGGTQRL 144
PRK06210 PRK06210
enoyl-CoA hydratase; Provisional
 21-166 4.55e-08

enoyl-CoA hydratase; Provisional


Pssm-ID: 180472  Cd Length: 272  Bit Score: 52.79  E-value: 4.55e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    21 IIHLMNPDNLNA----LEGEDYiylgELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYpSETSKWVSN 96
Cdd:PRK06210  18 VITLNRPDRLNAwtpvMEAEVY----AAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRD-TDVRPFVGN 92

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 6323314    97 ----FVARNVYVTDAfikhSKVLICCLNGPA--IGLSAALvaLCDIVYSiNDKVYLLYPFANLGLITEGGTTVSLP 166
Cdd:PRK06210  93 rrpdYQTRYHFLTAL----RKPVIAAINGACagIGLTHAL--MCDVRFA-ADGAKFTTAFARRGLIAEHGISWILP 161
PRK06072 PRK06072
enoyl-CoA hydratase; Provisional
 17-207 1.39e-07

enoyl-CoA hydratase; Provisional


Pssm-ID: 168377 [Multi-domain]  Cd Length: 248  Bit Score: 51.32  E-value: 1.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    17 GPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNK--YPsetskwv 94
Cdd:PRK06072   8 EGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPDFAIDLREtfYP------- 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    95 snfVARNVYVTDafikhsKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLyPFANLGLITEGGTTVSLpLKFGTNTT 174
Cdd:PRK06072  81 ---IIREIRFSD------KIYISAINGVTAGACIGIALSTDFKFASRDVKFVT-AFQRLGLASDTGVAYFL-LKLTGQRF 149

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 6323314   175 YECLMFNKPFKYDIMCENGF--ISKNfnmPSSNAE 207
Cdd:PRK06072 150 YEILVLGGEFTAEEAERWGLlkISED---PLSDAE 181
PRK08260 PRK08260
enoyl-CoA hydratase; Provisional
 9-166 6.21e-07

enoyl-CoA hydratase; Provisional


Pssm-ID: 236206 [Multi-domain]  Cd Length: 296  Bit Score: 49.62  E-value: 6.21e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     9 EKISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPS 88
Cdd:PRK08260   4 ETIRYDVADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    89 ETSKWVSNFVARNVY------VTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYpFANLGLITEGGTT 162
Cdd:PRK08260  84 EADEEDRADPSDDGVrdgggrVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFV-FGRRGIVPEAASS 162


                 ....
gi 6323314   163 VSLP 166
Cdd:PRK08260 163 WFLP 166
PLN02664 PLN02664
enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
 18-199 1.31e-06

enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase


Pssm-ID: 178269 [Multi-domain]  Cd Length: 275  Bit Score: 48.74  E-value: 1.31e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    18 PFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAqgddTNKYPSETSKWVSNF 97
Cdd:PLN02664  17 SVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSI----SEQSSSGDRGRSGER 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    98 VARNV-YVTDAF--IKH-SKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPfANLGLITEGGTTVSLPLKFGTNT 173
Cdd:PLN02664  93 LRRKIkFLQDAItaIEQcRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKE-VDLAITADLGTLQRLPSIVGYGN 171

                        170       180
                 ....*....|....*....|....*.
gi 6323314   174 TYECLMFNKPFKYDIMCENGFISKNF 199
Cdd:PLN02664 172 AMELALTGRRFSGSEAKELGLVSRVF 197
PRK09076 PRK09076
enoyl-CoA hydratase; Provisional
 9-170 2.32e-06

enoyl-CoA hydratase; Provisional


Pssm-ID: 236373 [Multi-domain]  Cd Length: 258  Bit Score: 47.61  E-value: 2.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     9 EKISYRIEGPFFIIHLMNPDnLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG-RFFSSGADFKGIA---KAQGDDTN 84
Cdd:PRK09076   3 IELDLEIDGHVAILTLNNPP-ANTWTADSLQALKQLVLELNADKDVYALVITGDGeKFFSAGADLNLFAdgdKAVAREMA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    85 KYPSETSKWVSNFvarnvyvtdafikhSKVLICCLNGPAI--GLSAALValCDIVYSiNDKVYLLYPFANLGLITEGGTT 162
Cdd:PRK09076  82 RRFGEAFEALSAF--------------RGVSIAAINGYAMggGLECALA--CDIRIA-EEQAQMALPEASVGLLPCAGGT 144


                 ....*...
gi 6323314   163 VSLPLKFG 170
Cdd:PRK09076 145 QNLPWLVG 152
PRK07659 PRK07659
enoyl-CoA hydratase; Provisional
 9-174 6.62e-06

enoyl-CoA hydratase; Provisional


Pssm-ID: 236073 [Multi-domain]  Cd Length: 260  Bit Score: 46.56  E-value: 6.62e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     9 EKISYRIEGPFFIIHLMNPDNLNALegeDYIYLGELLELAD--RNRDVYFTIIQSSGRFFSSGADFKGIAKAqgDDTNKY 86
Cdd:PRK07659   6 ESVVVKYEGRVATIMLNRPEALNAL---DEPMLKELLQALKevAESSAHIVVLRGNGRGFSAGGDIKMMLSS--NDESKF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    87 PSetskwVSNFVARnvyVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVyLLYPFANLGLITEGGTTVSLP 166
Cdd:PRK07659  81 DG-----VMNTISE---IVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAK-LAMNFIGIGLIPDGGGHFFLQ 151


                 ....*...
gi 6323314   167 LKFGTNTT 174
Cdd:PRK07659 152 KRVGENKA 159
PRK07511 PRK07511
enoyl-CoA hydratase; Provisional
 1-165 9.71e-06

enoyl-CoA hydratase; Provisional


Pssm-ID: 181009 [Multi-domain]  Cd Length: 260  Bit Score: 45.76  E-value: 9.71e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     1 MSQEIRQnekisyRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQG 80
Cdd:PRK07511   1 MSAELLS------RREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    81 DDtnkyPSETSK-------WVsnfvarnvyvtDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLyPFANL 153
Cdd:PRK07511  75 KP----PSVQAAsidglhdWI-----------RAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVM-AYVKV 138

                        170
                 ....*....|..
gi 6323314   154 GLITEGGTTVSL 165
Cdd:PRK07511 139 GLTPDGGGSWFL 150
PLN02851 PLN02851
3-hydroxyisobutyryl-CoA hydrolase-like protein
 24-165 1.25e-05

3-hydroxyisobutyryl-CoA hydrolase-like protein


Pssm-ID: 178443 [Multi-domain]  Cd Length: 407  Bit Score: 46.13  E-value: 1.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    24 LMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAqgddTNKYPSETSKWVSNFVARNVY 103
Cdd:PLN02851  57 LNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHL----INEGNVEECKLFFENLYKFVY 132

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 6323314   104 VTDAFIKHSkvlICCLNGPAIGLSAAlVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSL 165
Cdd:PLN02851 133 LQGTYLKPN---VAIMDGITMGCGAG-ISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYL 190
PRK07658 PRK07658
enoyl-CoA hydratase; Provisional
 9-183 2.59e-05

enoyl-CoA hydratase; Provisional


Pssm-ID: 181070 [Multi-domain]  Cd Length: 257  Bit Score: 44.62  E-value: 2.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     9 EKISYRIEGPFFIIHLMNPDnLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGAD---FKGIAKAqgddtnk 85
Cdd:PRK07658   2 KFLSVRVEDHVAVITLNHPP-ANALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADikeFTSVTEA------- 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    86 ypSETSKwvsnfVARNVYVTDAFIKH-SKVLICCLNGPAIGLSAALVALCDI-VYSINDKVYLlyPFANLGLITEGGTTV 163
Cdd:PRK07658  74 --EQATE-----LAQLGQVTFERVEKfSKPVIAAIHGAALGGGLELAMSCHIrFATESAKLGL--PELNLGLIPGFAGTQ 144

                        170       180
                 ....*....|....*....|
gi 6323314   164 SLPLKFGTNTTYECLMFNKP 183
Cdd:PRK07658 145 RLPRYVGKAKALEMMLTSEP 164
PRK05864 PRK05864
enoyl-CoA hydratase; Provisional
 21-179 3.31e-05

enoyl-CoA hydratase; Provisional


Pssm-ID: 168278 [Multi-domain]  Cd Length: 276  Bit Score: 44.44  E-value: 3.31e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    21 IIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPSetskwvsnFVAR 100
Cdd:PRK05864  22 LITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGLTRPT--------YALR 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314   101 NVYVTDAFI----KHSKVLICCLNGPAIGLSAALVALCDIVYSINDkVYLLYPFANLGLI-TEGGTTVSLPLKFGTNTTY 175
Cdd:PRK05864  94 SMELLDDVIlalrRLHQPVIAAVNGPAIGGGLCLALAADIRVASSS-AYFRAAGINNGLTaSELGLSYLLPRAIGSSRAF 172


                 ....
gi 6323314   176 ECLM 179
Cdd:PRK05864 173 EIML 176
PRK07657 PRK07657
enoyl-CoA hydratase; Provisional
 7-166 4.24e-05

enoyl-CoA hydratase; Provisional


Pssm-ID: 181069 [Multi-domain]  Cd Length: 260  Bit Score: 43.96  E-value: 4.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     7 QNEKISYRIEGP-FFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG-RFFSSGADFKGIAKAqgddtn 84
Cdd:PRK07657   1 MLQNISVDYVTPhVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGeKAFCAGADLKERAGM------ 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    85 kypSETSkwVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLyPFANLGLITEGGTTVS 164
Cdd:PRK07657  75 ---NEEQ--VRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGL-TETTLAIIPGAGGTQR 148


                 ..
gi 6323314   165 LP 166
Cdd:PRK07657 149 LP 150
PRK05870 PRK05870
enoyl-CoA hydratase; Provisional
 7-184 5.24e-05

enoyl-CoA hydratase; Provisional


Pssm-ID: 180298  Cd Length: 249  Bit Score: 43.56  E-value: 5.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     7 QNEKISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKy 86
Cdd:PRK05870   1 MMDPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGRPAED- 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    87 psetskwvsnfVARNVYvtDAF--IKHSKV-LICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTTV 163
Cdd:PRK05870  80 -----------GLRRIY--DGFlaVASCPLpTIAAVNGAAVGAGLNLALAADVRIA-GPKALFDARFQKLGLHPGGGATW 145

                        170       180
                 ....*....|....*....|.
gi 6323314   164 SLPLKFGTNTTYECLMFNKPF 184
Cdd:PRK05870 146 MLQRAVGPQVARAALLFGMRF 166
PRK12478 PRK12478
crotonase/enoyl-CoA hydratase family protein;
9-144 1.37e-04

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 183548  Cd Length: 298  Bit Score: 42.63  E-value: 1.37e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     9 EKISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGD----DTN 84
Cdd:PRK12478   5 QTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEammtDGR 84

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 6323314    85 KYPSETSKWVSnfvARNVYVTDAFI---KHSKVLICCLNGPAIGlSAALVALC-DIVYSINDKV 144
Cdd:PRK12478  85 WDPGKDFAMVT---ARETGPTQKFMaiwRASKPVIAQVHGWCVG-GASDYALCaDIVIASDDAV 144
PRK07799 PRK07799
crotonase/enoyl-CoA hydratase family protein;
16-166 1.41e-04

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 181122 [Multi-domain]  Cd Length: 263  Bit Score: 42.40  E-value: 1.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    16 EGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKaqgddtnKYPSETSKWVS 95
Cdd:PRK07799  12 RGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATK-------KPPGDSFKDGS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    96 NFVARnvyvTDAFIKH---SKVLICCLNGPAIGLSAALVALCDI-------VYSINDKVYLLYPFanlgliteGGTTVSL 165
Cdd:PRK07799  85 YDPSR----IDALLKGrrlTKPLIAAVEGPAIAGGTEILQGTDIrvagesaKFGISEAKWSLFPM--------GGSAVRL 152


                 .
gi 6323314   166 P 166
Cdd:PRK07799 153 V 153
PRK07327 PRK07327
enoyl-CoA hydratase/isomerase family protein;
22-136 3.22e-04

enoyl-CoA hydratase/isomerase family protein;


Pssm-ID: 235991  Cd Length: 268  Bit Score: 41.16  E-value: 3.22e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    22 IHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDdtnkYPSETSKWVSnfvARN 101
Cdd:PRK07327  25 IVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMADD----FEVRARVWRE---ARD 97

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 6323314   102 -VYvtdAFIKHSKVLICCLNGPAI--GLSAALVAlcDI 136
Cdd:PRK07327  98 lVY---NVINCDKPIVSAIHGPAVgaGLVAALLA--DI 130
PRK06494 PRK06494
enoyl-CoA hydratase; Provisional
 9-173 3.58e-04

enoyl-CoA hydratase; Provisional


Pssm-ID: 180591 [Multi-domain]  Cd Length: 259  Bit Score: 41.18  E-value: 3.58e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314     9 EKISYRIEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG-RFFSSGADFKgiAKAQGDDTNKYP 87
Cdd:PRK06494   4 PFSTVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGdKAFSAGNDLK--EQAAGGKRGWPE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    88 SETSKWVSNFvarnvyvtdafiKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLyPFANLGLITEGGTTVSLPL 167
Cdd:PRK06494  82 SGFGGLTSRF------------DLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFAL-PEPRVGLAALAGGLHRLPR 148


                 ....*.
gi 6323314   168 KFGTNT 173
Cdd:PRK06494 149 QIGLKR 154
PRK06023 PRK06023
crotonase/enoyl-CoA hydratase family protein;
21-197 3.78e-04

crotonase/enoyl-CoA hydratase family protein;


Pssm-ID: 168351  Cd Length: 251  Bit Score: 40.93  E-value: 3.78e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    21 IIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSG---ADFkgIAKAQGDDTNKypSEtskwVSNF 97
Cdd:PRK06023  18 VIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGndmQDF--LAAAMGGTSFG--SE----ILDF 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    98 VArnvyvtdAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSiNDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYEC 177
Cdd:PRK06023  90 LI-------ALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFA-SPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFAL 161

                        170       180
                 ....*....|....*....|
gi 6323314   178 LMFNKPFKYDIMCENGFISK 197
Cdd:PRK06023 162 LALGEGFSAEAAQEAGLIWK 181
PLN02874 PLN02874
3-hydroxyisobutyryl-CoA hydrolase-like protein
 21-73 7.72e-03

3-hydroxyisobutyryl-CoA hydrolase-like protein


Pssm-ID: 178462 [Multi-domain]  Cd Length: 379  Bit Score: 37.47  E-value: 7.72e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 6323314    21 IIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFK 73
Cdd:PLN02874  23 VITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLK 75
PRK05809 PRK05809
short-chain-enoyl-CoA hydratase;
15-197 9.54e-03

short-chain-enoyl-CoA hydratase;


Pssm-ID: 180270 [Multi-domain]  Cd Length: 260  Bit Score: 36.65  E-value: 9.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    15 IEGPFFIIHLMNPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSG-RFFSSGADFkgiakAQGDDTNKYPSETSKW 93
Cdd:PRK05809  10 KEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGeKAFVAGADI-----SEMKDLNEEEGRKFGL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6323314    94 VSNFVARNVYVTDafikhsKVLICCLNGPAIGLSAALVALCDI-VYSINDKvyLLYPFANLGLITEGGTTVSLPLKFGTN 172
Cdd:PRK05809  85 LGNKVFRKLENLD------KPVIAAINGFALGGGCELSMACDIrIASEKAK--FGQPEVGLGITPGFGGTQRLARIVGPG 156

                        170       180
                 ....*....|....*....|....*
gi 6323314   173 TTYECLMFNKPFKYDIMCENGFISK 197
Cdd:PRK05809 157 KAKELIYTGDMINAEEALRIGLVNK 181
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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