NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|6324571|ref|NP_014640|]
View 

palmitoyltransferase PFA4 [Saccharomyces cerevisiae S288C]

Protein Classification

DHHC family palmitoyltransferase( domain architecture ID 10009157)

DHHC family palmitoyltransferase may catalyze the addition of palmitate onto various protein substrates and be involved in a variety of cellular processes

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
COG5273 COG5273
Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];
1-344 7.02e-67

Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];


:

Pssm-ID: 227598 [Multi-domain]  Cd Length: 309  Bit Score: 213.84  E-value: 7.02e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571    1 MPVKLRWPWLgIAIPTFLIS-FIGYGAHYFILSNFLSVPKQITFEFCLSMIWLSYYLAICTNPGRPLPN----------- 68
Cdd:COG5273  20 LLRTGLYAYK-MFIGLFLLSrIVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENitlsgyretis 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571   69 --YKPPPDIWRNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIVTTSVLFCIQAKRIY 146
Cdd:COG5273  99 rlLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIA 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571  147 FIWQQRHLPGYFfkKSELIFltiSSPLNSFVLLTITILFLRCLFNQILNGRSQIESWDMDRLESLFNSGRLtqklidntw 226
Cdd:COG5273 179 GIFSIRHDTSLA--ICFLIF---GCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPL--------- 244
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571  227 rIYPESRSFQNKKDAEEhltkkrprfdelvnfpydfdlytnallylgpihlWLWPYGVPTGDGNNFPKNGISKYEANSSL 306
Cdd:COG5273 245 -CRESNLPFTNIFDSSE----------------------------------GALPLDLGIGQNLSTIKGSNALYWLTPLH 289
                       330       340       350
                ....*....|....*....|....*....|....*...
gi 6324571  307 EDhilslpwppdggktntvfNHGSSTIEMRNESGEQLI 344
Cdd:COG5273 290 TN------------------YCNSYDFSLRSDTLAELL 309
 
Name Accession Description Interval E-value
COG5273 COG5273
Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];
1-344 7.02e-67

Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];


Pssm-ID: 227598 [Multi-domain]  Cd Length: 309  Bit Score: 213.84  E-value: 7.02e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571    1 MPVKLRWPWLgIAIPTFLIS-FIGYGAHYFILSNFLSVPKQITFEFCLSMIWLSYYLAICTNPGRPLPN----------- 68
Cdd:COG5273  20 LLRTGLYAYK-MFIGLFLLSrIVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENitlsgyretis 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571   69 --YKPPPDIWRNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIVTTSVLFCIQAKRIY 146
Cdd:COG5273  99 rlLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIA 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571  147 FIWQQRHLPGYFfkKSELIFltiSSPLNSFVLLTITILFLRCLFNQILNGRSQIESWDMDRLESLFNSGRLtqklidntw 226
Cdd:COG5273 179 GIFSIRHDTSLA--ICFLIF---GCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPL--------- 244
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571  227 rIYPESRSFQNKKDAEEhltkkrprfdelvnfpydfdlytnallylgpihlWLWPYGVPTGDGNNFPKNGISKYEANSSL 306
Cdd:COG5273 245 -CRESNLPFTNIFDSSE----------------------------------GALPLDLGIGQNLSTIKGSNALYWLTPLH 289
                       330       340       350
                ....*....|....*....|....*....|....*...
gi 6324571  307 EDhilslpwppdggktntvfNHGSSTIEMRNESGEQLI 344
Cdd:COG5273 290 TN------------------YCNSYDFSLRSDTLAELL 309
DHHC pfam01529
DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which ...
77-203 1.83e-30

DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which are palmitoyltransferases. Palmitoylation or, more specifically S-acylation, plays important roles in the regulation of protein localization, stability, and activity. It is a post-translational protein modification that involves the attachment of palmitic acid to Cys residues through a thioester linkage. Protein acyltransferases (PATs), also known as palmitoyltransferases, catalyze this reaction by transferring the palmitoyl group from palmitoyl-CoA to the thiol group of Cys residues. They are characterized by the presence of a 50-residue-long domain called the DHHC domain, which in most but not all cases is also cysteine-rich and gets its name from a highly conserved DHHC signature tetrapeptide (Asp-His-His-Cys). The Cys residue within the DHHC domain forms a stable acyl intermediate and transfers the acyl chain to the Cys residues of a target protein. Some proteins containing a DHHC domain include Drosophila DNZ1 protein, Mouse Abl-philin 2 (Aph2) protein, Mammalian ZDHHC9, Yeast ankyrin repeat-containing protein AKR1, Yeast Erf2 protein, and Arabidopsis thaliana tip growth defective 1.


Pssm-ID: 396215  Cd Length: 132  Bit Score: 113.23  E-value: 1.83e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571     77 RNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIVTTSVLFCIQAKRIYFIWQQRHLPG 156
Cdd:pfam01529   5 LKYCSTCNIYKPPRSKHCRVCNRCVLRFDHHCPWLNNCIGKRNHKYFILFLLYLTLYLILYLVLSLYYLVKLIESSTLFF 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 6324571    157 YF--FKKSELIFLTISSplnSFVLLTITILFLRCLFNqILNGRSQIESW 203
Cdd:pfam01529  85 FLilFLFSISIILLILS---LFFLLFLGILLFFHLYL-ISRNLTTYEFM 129
 
Name Accession Description Interval E-value
COG5273 COG5273
Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];
1-344 7.02e-67

Uncharacterized protein containing DHHC-type Zn finger [General function prediction only];


Pssm-ID: 227598 [Multi-domain]  Cd Length: 309  Bit Score: 213.84  E-value: 7.02e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571    1 MPVKLRWPWLgIAIPTFLIS-FIGYGAHYFILSNFLSVPKQITFEFCLSMIWLSYYLAICTNPGRPLPN----------- 68
Cdd:COG5273  20 LLRTGLYAYK-MFIGLFLLSrIVVYTLLVIVKSLSLVVLFIILFIVILVLASFSYLLLLVSDPGYLGENitlsgyretis 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571   69 --YKPPPDIWRNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIVTTSVLFCIQAKRIY 146
Cdd:COG5273  99 rlLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIA 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571  147 FIWQQRHLPGYFfkKSELIFltiSSPLNSFVLLTITILFLRCLFNQILNGRSQIESWDMDRLESLFNSGRLtqklidntw 226
Cdd:COG5273 179 GIFSIRHDTSLA--ICFLIF---GCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPL--------- 244
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571  227 rIYPESRSFQNKKDAEEhltkkrprfdelvnfpydfdlytnallylgpihlWLWPYGVPTGDGNNFPKNGISKYEANSSL 306
Cdd:COG5273 245 -CRESNLPFTNIFDSSE----------------------------------GALPLDLGIGQNLSTIKGSNALYWLTPLH 289
                       330       340       350
                ....*....|....*....|....*....|....*...
gi 6324571  307 EDhilslpwppdggktntvfNHGSSTIEMRNESGEQLI 344
Cdd:COG5273 290 TN------------------YCNSYDFSLRSDTLAELL 309
DHHC pfam01529
DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which ...
77-203 1.83e-30

DHHC palmitoyltransferase; This entry refers to the DHHC domain, found in DHHC proteins which are palmitoyltransferases. Palmitoylation or, more specifically S-acylation, plays important roles in the regulation of protein localization, stability, and activity. It is a post-translational protein modification that involves the attachment of palmitic acid to Cys residues through a thioester linkage. Protein acyltransferases (PATs), also known as palmitoyltransferases, catalyze this reaction by transferring the palmitoyl group from palmitoyl-CoA to the thiol group of Cys residues. They are characterized by the presence of a 50-residue-long domain called the DHHC domain, which in most but not all cases is also cysteine-rich and gets its name from a highly conserved DHHC signature tetrapeptide (Asp-His-His-Cys). The Cys residue within the DHHC domain forms a stable acyl intermediate and transfers the acyl chain to the Cys residues of a target protein. Some proteins containing a DHHC domain include Drosophila DNZ1 protein, Mouse Abl-philin 2 (Aph2) protein, Mammalian ZDHHC9, Yeast ankyrin repeat-containing protein AKR1, Yeast Erf2 protein, and Arabidopsis thaliana tip growth defective 1.


Pssm-ID: 396215  Cd Length: 132  Bit Score: 113.23  E-value: 1.83e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 6324571     77 RNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIVTTSVLFCIQAKRIYFIWQQRHLPG 156
Cdd:pfam01529   5 LKYCSTCNIYKPPRSKHCRVCNRCVLRFDHHCPWLNNCIGKRNHKYFILFLLYLTLYLILYLVLSLYYLVKLIESSTLFF 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 6324571    157 YF--FKKSELIFLTISSplnSFVLLTITILFLRCLFNqILNGRSQIESW 203
Cdd:pfam01529  85 FLilFLFSISIILLILS---LFFLLFLGILLFFHLYL-ISRNLTTYEFM 129
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH